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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synapse organization
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Accession:GO:0050807 term browser browse the term
Definition:Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).
Synonyms:exact_synonym: regulation of synapse organisation;   regulation of synapse structure
 related_synonym: regulation of synapse organization and biogenesis


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regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in IMP
IDA
PMID:19524020 SynGO PMID:19524020, PMID:19524020 RGD:13702171, RGD:13702171 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Apoe apolipoprotein E involved_in ISO (MGI:5800587|PMID:27683909) RGD PMID:27683909 MGI:5800587 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Arf4 ADP-ribosylation factor 4 involved_in ISO (MGI:5464048|PMID:23050017) RGD PMID:23050017 MGI:5464048 NCBI chr16:2,338,333...2,354,909
Ensembl chr16:2,338,333...2,354,909
JBrowse link
G C1ql3 complement C1q like 3 acts_upstream_of_or_within ISO (MGI:4939847|PMID:21262840) RGD PMID:21262840 MGI:4939847 NCBI chr17:80,314,186...80,320,681
Ensembl chr17:80,314,186...80,320,681
JBrowse link
G Camk1 calcium/calmodulin-dependent protein kinase I involved_in IDA
IMP
PMID:18184567 SynGO PMID:18184567, PMID:18184567 RGD:13702161, RGD:13702161 NCBI chr 4:145,289,300...145,300,146
Ensembl chr 4:145,288,996...145,300,177
JBrowse link
G Cdh8 cadherin 8 involved_in IEA
ISO
GO_REF:0000107
(MGI:5603450|PMID:25126785)
Ensembl
RGD
PMID:25126785 GO_REF:0000107 MGI:5603450 NCBI chr19:6,031,654...6,431,502
Ensembl chr19:6,046,665...6,426,216
JBrowse link
G Cntnap4 contactin associated protein family member 4 involved_in ISO (MGI:5574524|PMID:24870235) RGD PMID:24870235 MGI:5574524 NCBI chr19:44,817,727...45,118,133
Ensembl chr19:44,908,905...45,117,309
JBrowse link
G Cttnbp2 cortactin binding protein 2 involved_in IDA
IMP
PMID:22262902 SynGO PMID:22262902, PMID:22262902 RGD:13702362, RGD:13702362 NCBI chr 4:42,932,897...43,096,454
Ensembl chr 4:42,932,903...43,096,399
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (MGI:5804030|PMID:27707967) RGD PMID:27707967 MGI:5804030 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:5692401|PMID:25318560) RGD PMID:25318560 MGI:5692401 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Etv5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO MGI:3589421 (MGI:3762055|PMID:17785180) RGD PMID:17785180 MGI:3762055 NCBI chr11:82,194,657...82,252,145
Ensembl chr11:82,194,657...82,252,139
JBrowse link
G Gpm6a glycoprotein m6a involved_in IDA
IMP
PMID:27793698 SynGO PMID:27793698, PMID:27793698 RGD:13702167, RGD:13702167 NCBI chr16:39,367,697...39,719,292
Ensembl chr16:39,367,692...39,719,187
JBrowse link
G Igsf9 immunoglobulin superfamily, member 9 acts_upstream_of_or_within ISO MGI:3784989 (MGI:5568155|PMID:24647940) RGD PMID:24647940 MGI:5568155 NCBI chr13:90,809,459...90,832,300
Ensembl chr13:90,815,562...90,832,469
JBrowse link
G Il10 interleukin 10 IDA RGD PMID:24278397 RGD:11049480 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha IMP RGD PMID:24278397 RGD:11049480 NCBI chr 8:49,558,062...49,573,891
Ensembl chr 8:49,560,035...49,573,742
JBrowse link
G Klk8 kallikrein related-peptidase 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1933027|PMID:11273653)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11273653 GO_REF:0000024 GO_REF:0000107 MGI:1933027 NCBI chr 1:99,735,168...99,742,011
Ensembl chr 1:99,734,993...99,742,009
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IDA
IMP
PMID:19442733 SynGO PMID:19442733, PMID:19442733 RGD:11069248, RGD:11069248 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3529811 (MGI:3848079|PMID:19345204)
RGD PMID:19345204, PMID:21873635 MGI:3848079, RGD:13792537 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISO (MGI:6094920|PMID:28871037) RGD PMID:28871037 MGI:6094920 NCBI chr 4:171,250,766...171,461,571
Ensembl chr 4:171,250,818...171,461,677
JBrowse link
G Ptprt protein tyrosine phosphatase, receptor type, T involved_in IMP
IDA
PMID:19816407 SynGO PMID:19816407, PMID:19816407 RGD:13702429, RGD:13702429 NCBI chr 3:157,537,192...158,328,984
Ensembl chr 3:157,544,583...158,328,881
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 involved_in IDA
IMP
PMID:23303958 SynGO PMID:23303958, PMID:23303958 RGD:13702404, RGD:13702404 NCBI chr 5:139,790,395...139,819,014
Ensembl chr 5:139,783,951...139,819,016
JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 involved_in IMP
IDA
PMID:23303958 SynGO PMID:23303958, PMID:23303958 RGD:13702404, RGD:13702404 NCBI chr 3:160,237,659...160,301,792
Ensembl chr 3:160,241,619...160,301,552
JBrowse link
G Septin11 septin 11 involved_in IMP
IDA
PMID:19380581 SynGO PMID:19380581, PMID:19380581 RGD:13702154, RGD:13702154 NCBI chr14:16,369,544...16,405,645
Ensembl chr14:16,369,544...16,452,998
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in IDA
IMP
PMID:21217644 SynGO PMID:21217644, PMID:21217644 RGD:13702145, RGD:13702145 NCBI chr 1:217,149,156...217,593,950
Ensembl chr 1:217,151,166...217,592,763
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IDA
IMP
PMID:21217644 SynGO PMID:21217644, PMID:21217644 RGD:13702145, RGD:13702145 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (MGI:5616960|PMID:25429150) RGD PMID:25429150 MGI:5616960 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in IMP
IDA
PMID:27273464 SynGO PMID:27273464, PMID:27273464 RGD:13702200, RGD:13702200 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:27273464) RGD PMID:27273464 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:147,582,195...147,589,529 JBrowse link
G Sparc secreted protein acidic and cysteine rich involved_in EXP
IDA
PMID:21788491 SynGO PMID:21788491, PMID:21788491 RGD:13702385, RGD:13702385 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Sparcl1 SPARC like 1 involved_in EXP
IDA
PMID:21788491 SynGO PMID:21788491, PMID:21788491 RGD:13702385, RGD:13702385 NCBI chr14:6,994,261...7,025,309
Ensembl chr14:6,994,190...7,025,308
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:6202006|PMID:16547515) RGD PMID:16547515 MGI:6202006 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO (MGI:5749591|PMID:26658218) RGD PMID:26658218 MGI:5749591 NCBI chr 7:140,637,287...140,640,953
Ensembl chr 7:140,637,287...140,640,953
JBrowse link
G Tubb5 tubulin, beta 5 class I involved_in ISO (MGI:5588760|PMID:24833723) RGD PMID:24833723 MGI:5588760 NCBI chr20:3,422,448...3,426,420
Ensembl chr20:3,422,461...3,426,371
JBrowse link
G Vcp valosin-containing protein involved_in IDA
IMP
PMID:22105171 SynGO PMID:22105171, PMID:22105171 RGD:13702359, RGD:13702359 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:18986540) RGD PMID:18986540 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18986540) RGD PMID:18986540 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) RGD PMID:24328732 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Cfl1 cofilin 1 involved_in IMP
NAS
PMID:17360908 RGD
ARUK-UCL
PMID:23974706, PMID:17360908 RGD:11570553, RGD:12793018 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO UniProtKB:P04925|UniProtKB:Q01097 (MGI:5447900|PMID:22820466) RGD PMID:22820466 MGI:5447900 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO UniProtKB:P04925|UniProtKB:P39688 (MGI:5447900|PMID:22820466) RGD PMID:22820466 MGI:5447900 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Prnp prion protein involved_in ISO ComplexPortal:CPX-1134|UniProtKB:P39688|UniProtKB:Q01097 (MGI:5447900|PMID:22820466), (MGI:5515653|PMID:24012003) RGD PMID:22820466 PMID:24012003 MGI:5447900 MGI:5515653 NCBI chr 3:124,515,917...124,531,320
Ensembl chr 3:124,515,978...124,531,316
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm3 dynamin 3 IDA RGD PMID:17880892 RGD:8553820 NCBI chr13:79,906,711...80,379,967
Ensembl chr13:79,910,382...80,379,929
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 IMP
IDA
RGD PMID:20531346, PMID:20531346 RGD:11251757, RGD:11251757 NCBI chr17:20,090,136...20,182,332
Ensembl chr17:20,090,246...20,182,206
JBrowse link
G Efna1 ephrin A1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3696283|PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 MGI:3696283 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISS
ISO
GO_REF:0000024
(MGI:3696283|PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 MGI:3696283 NCBI chr 9:94,569,286...94,601,852
Ensembl chr 9:94,569,286...94,601,852
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
ISS
UniProtKB:Q99K10 (PMID:23143522)
(MGI:5493186|PMID:23143522)
GO_REF:0000024
RGD
BHF-UCL
PMID:23143522 GO_REF:0000024 MGI:5493186 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) RGD PMID:21808020 MGI:5286761 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) RGD PMID:16675393 MGI:3629385 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ube3a ubiquitin protein ligase E3A IMP RGD PMID:25867122 RGD:11079590 NCBI chr 1:116,586,901...116,678,161
Ensembl chr 1:116,587,815...116,679,973
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
(MGI:5707148|PMID:24467251)
UniProt
RGD
PMID:24467251 GO_REF:0000024 MGI:5707148 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptn pleiotrophin IDA RGD PMID:7722643 RGD:9834945 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 IMP RGD PMID:26169356 RGD:11074527 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24259049) RGD PMID:24259049 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:6274944|PMID:29643768) RGD PMID:29643768 MGI:6274944 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5307186|PMID:22198949) RGD PMID:22198949 MGI:5307186 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(MGI:4820709|PMID:18986540)
Ensembl
RGD
PMID:18986540 GO_REF:0000107 MGI:4820709 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in ISO (MGI:4881358|PMID:21029865) RGD PMID:21029865 MGI:4881358 NCBI chr10:55,532,097...55,545,675
Ensembl chr10:55,532,077...55,544,429
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009363|PMID:19900895)
UniProt
RGD
PMID:19900895 GO_REF:0000024 MGI:5009363 NCBI chr10:86,280,865...86,282,681
Ensembl chr10:86,280,892...86,282,693
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO (MGI:5471880|PMID:23407945) RGD PMID:23407945 MGI:5471880 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgrmc1 progesterone receptor membrane component 1 involved_in IGI PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:123,205,869...123,213,880
Ensembl chr  X:123,205,869...123,213,882
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24328732)
Ensembl
RGD
PMID:24328732 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in IGI PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Ins2 insulin 2 involved_in ISO ComplexPortal:CPX-1134 (PMID:19188609) RGD PMID:19188609 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Zfp804a zinc finger protein 804A involved_in IMP PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr 3:69,268,348...69,574,118
Ensembl chr 3:69,549,673...69,573,420
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:162,480,766...162,594,145
Ensembl chr 3:162,480,804...162,581,610
JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 IMP RGD PMID:23441206 RGD:11530033 NCBI chr14:104,338,486...104,375,840
Ensembl chr14:104,340,434...104,375,649
JBrowse link
G Actr3 actin related protein 3 IMP RGD PMID:23441206 RGD:11530033 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link
G Afdn afadin, adherens junction formation factor IMP RGD PMID:22948147 RGD:13838731 NCBI chr 1:53,713,873...53,861,918
Ensembl chr 1:53,715,693...53,802,658
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IMP RGD PMID:15673667 RGD:9684988 NCBI chr10:109,107,326...109,187,458
Ensembl chr10:109,107,389...109,187,115
JBrowse link
G Bhlhb9 basic helix-loop-helix family member B9 involved_in ISO (MGI:5545985|PMID:21199326) RGD PMID:21199326 MGI:5545985 NCBI chr  X:106,359,981...106,393,457
Ensembl chr  X:106,390,759...106,393,459
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta involved_in IMP PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr14:86,208,876...86,297,727
Ensembl chr14:86,208,901...86,297,652
JBrowse link
G Caprin1 cell cycle associated protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4888105|PMID:20516077)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20516077 GO_REF:0000024 GO_REF:0000107 MGI:4888105 NCBI chr 3:93,701,830...93,789,580
Ensembl chr 3:93,702,487...93,789,617
JBrowse link
G Caprin2 caprin family member 2 involved_in ISO (MGI:4888105|PMID:20516077) RGD PMID:20516077 MGI:4888105 NCBI chr 4:183,304,993...183,374,195
Ensembl chr 4:183,305,813...183,374,195
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IMP RGD PMID:18606847 RGD:11576294 NCBI chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (MGI:4836115|PMID:20510857) RGD PMID:20510857 MGI:4836115 NCBI chr12:40,016,774...40,221,067
Ensembl chr12:40,018,937...40,219,291
JBrowse link
G Dbn1 drebrin 1 involved_in IMP
ISO
ISS
IBA
IEA
(MGI:5688247|PMID:25865831)
GO_REF:0000024
PMID:21873635
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25865831, PMID:19174472, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5688247, RGD:10398809, RGD:13792537 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Dbnl drebrin-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,029,335...86,044,364
Ensembl chr14:86,029,335...86,044,364
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IMP PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dnm1l dynamin 1-like IMP RGD PMID:19605646 RGD:7800727 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IMP PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 3:111,545,007...111,553,605
Ensembl chr 3:111,545,007...111,553,604
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4358076 (MGI:4355773|PMID:19625617)
Ensembl
RGD
PMID:19625617 GO_REF:0000107 MGI:4355773 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:5426130|PMID:21852430) RGD PMID:21852430 MGI:5426130 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate IMP RGD PMID:16202710 RGD:9685333 NCBI chr20:42,966,140...42,971,838
Ensembl chr20:42,966,140...42,971,838
JBrowse link
G Mfn1 mitofusin 1 IMP RGD PMID:19605646 RGD:7800727 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:19605646 RGD:7800727 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IMP RGD PMID:19605646 RGD:7800727 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5619436|PMID:23483716) RGD PMID:23483716 MGI:5619436 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:18481281 RGD:7775053 NCBI chr  X:114,784,452...115,042,683
Ensembl chr  X:114,929,029...115,036,669
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:5286805|PMID:21664258), (MGI:5426130|PMID:21852430)
Ensembl
RGD
PMID:21664258 PMID:21852430 GO_REF:0000107 MGI:5286805 MGI:5426130 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,257,910...2,497,429 JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 IMP RGD PMID:16474385 RGD:10043325 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5800585|PMID:27683913)
UniProt
RGD
PMID:27683913 GO_REF:0000024 MGI:5800585 NCBI chr 8:13,796,009...13,816,125
Ensembl chr 8:13,796,021...13,816,109
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) RGD PMID:21670302 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
positive regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctn1 dynactin subunit 1 involved_in ISO (PMID:18364389) RGD PMID:18364389 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
positive regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24259049) RGD PMID:24259049 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5439235|PMID:22854782)
UniProt
RGD
PMID:22854782 GO_REF:0000024 MGI:5439235 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:148,168,530...148,231,587
Ensembl chr 5:148,193,710...148,231,587
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 9:31,280,623...32,022,535
Ensembl chr 9:31,281,316...32,019,205
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:24,854,981...24,875,712
Ensembl chr19:24,855,299...24,875,137
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:25,029,037...25,069,146
Ensembl chr19:25,029,037...25,069,142
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 2:258,792,838...258,997,145
Ensembl chr 2:258,792,839...258,997,145
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr14:28,362,176...29,226,085
Ensembl chr14:28,393,394...28,967,980
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:164,937,188...164,964,819
Ensembl chr 3:164,937,198...164,964,702
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:210,977,125...210,982,582
Ensembl chr 2:210,977,938...210,982,579
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 7:138,704,124...138,707,221
Ensembl chr 7:138,704,126...138,707,221
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:116,830,773...116,832,299 JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:3851850|PMID:19571134)
Ensembl
RGD
PMID:19571134 GO_REF:0000107 MGI:3851850 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bhlhb9 basic helix-loop-helix family member B9 involved_in ISO (MGI:5545985|PMID:21199326) RGD PMID:21199326 MGI:5545985 NCBI chr  X:106,359,981...106,393,457
Ensembl chr  X:106,390,759...106,393,459
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within ISO MGI:1096391 (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr18:83,775,568...83,783,841
Ensembl chr18:83,777,665...83,782,930
JBrowse link
G Clstn1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1929897|MGI:2178323 (MGI:5576449|PMID:24613359)
RGD PMID:24613359, PMID:21873635 MGI:5576449, RGD:13792537 NCBI chr 5:166,533,262...166,601,686
Ensembl chr 5:166,533,181...166,601,684
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1929895|MGI:2178323 (MGI:5576449|PMID:24613359)
PMID:21873635
Ensembl
RGD
PMID:24613359, PMID:21873635 GO_REF:0000107 MGI:5576449, RGD:13792537 NCBI chr 8:105,322,577...106,036,821
Ensembl chr 8:105,323,837...105,462,168
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:1929895|MGI:1929897 (MGI:5576449|PMID:24613359)
GO_REF:0000107
RGD
Ensembl
PMID:24613359, PMID:21873635 GO_REF:0000107 MGI:5576449, RGD:13792537 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (MGI:4836115|PMID:20510857) RGD PMID:20510857 MGI:4836115 NCBI chr12:40,016,774...40,221,067
Ensembl chr12:40,018,937...40,219,291
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (MGI:5608921|PMID:25232112) RGD PMID:25232112 MGI:5608921 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5426777|PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2683349|PMID:14691139)
UniProt
RGD
PMID:14691139 GO_REF:0000024 MGI:2683349 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:2683349|PMID:14691139), (MGI:4881358|PMID:21029865) RGD PMID:14691139 PMID:21029865 MGI:2683349 MGI:4881358 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:2683349|PMID:14691139) RGD PMID:14691139 MGI:2683349 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:222,340,481...222,417,915
Ensembl chr 1:222,344,713...222,350,173
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 6:119,518,459...119,613,534
Ensembl chr 6:119,519,714...119,609,296
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO MGI:3045041 (MGI:3620293|PMID:16491079) RGD PMID:16491079 MGI:3620293 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27418511)
Ensembl
RGD
PMID:27418511 GO_REF:0000107 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(MGI:5645611|PMID:25908590)
(MGI:5315316|PMID:22357843)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22357843 PMID:25908590 GO_REF:0000024 GO_REF:0000107 MGI:5315316 MGI:5645611 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5645611|PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 MGI:5645611 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:51,466,367...51,638,161 JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:195,617,044...195,643,502
Ensembl chr 2:195,617,044...195,643,502
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:117,779,733...117,786,872
Ensembl chr 7:117,779,620...117,786,872
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO
IBA
(MGI:5294265|PMID:21940441)
PMID:21873635
RGD PMID:21940441, PMID:21873635 MGI:5294265, RGD:13792537 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:139,633,310...139,679,730
Ensembl chr 4:139,670,092...139,673,143
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 6:61,374,328...61,405,195
Ensembl chr 6:61,374,328...61,405,195
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr18:28,012,877...28,017,925
Ensembl chr18:28,012,877...28,017,925
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr20:25,990,304...26,163,656
Ensembl chr20:25,990,304...26,163,656
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr16:4,993,728...5,005,110
Ensembl chr16:4,997,461...5,003,066
JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:151,375,568...151,397,485
Ensembl chr 4:151,375,572...151,390,263
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:17582332
(MGI:5002432|PMID:21356198)
PMID:15797875
RGD PMID:21356198, PMID:17582332, PMID:15797875 MGI:5002432, RGD:8553502, RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(MGI:5320268|PMID:21642956)
RGD PMID:21642956, PMID:15797875 MGI:5320268, RGD:8554205 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
TAS
GO_REF:0000024
MGI:88281|MGI:88282 (MGI:5002432|PMID:21356198)
PMID:15797875
BHF-UCL
RGD
PMID:21356198, PMID:15797875 GO_REF:0000024 MGI:5002432, RGD:8554205 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5645611|PMID:25908590), (MGI:5902672|PMID:25989451) RGD PMID:25908590 PMID:25989451 MGI:5645611 MGI:5902672 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5576449|PMID:24613359)
(MGI:5902672|PMID:25989451)
RGD PMID:24613359 PMID:25989451 MGI:5576449 MGI:5902672 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:170,446,582...170,461,513
Ensembl chr 2:170,452,702...170,460,754
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr  X:147,582,195...147,589,529 JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:96,817,907...96,826,760
Ensembl chr15:96,821,832...96,826,653
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IDA
(PMID:24179158) RGD PMID:24179158, PMID:24179158 RGD:8553698 NCBI chr  X:104,734,035...104,760,658
Ensembl chr  X:104,734,082...104,760,547
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,257,910...2,497,429 JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IBA
IMP
(PMID:20152115)
PMID:21873635
(MGI:4439218|PMID:20152115)
RGD PMID:20152115, PMID:21873635, PMID:20152115 MGI:4439218, RGD:13792537, RGD:8554654 NCBI chr 3:145,031,427...145,199,273
Ensembl chr 3:145,032,200...145,199,356
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:93,491,761...93,495,132
Ensembl chr 8:93,491,761...93,495,130
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(MGI:1195230|PMID:9405095)
RGD PMID:9405095 PMID:18986540 MGI:1195230 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
positive regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrl1 adhesion G protein-coupled receptor L1 involved_in IDA PMID:21724987 UniProt PMID:21724987 RGD:8553824 NCBI chr19:25,029,037...25,069,146
Ensembl chr19:25,029,037...25,069,142
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO (MGI:5009363|PMID:19900895) RGD PMID:19900895 MGI:5009363 NCBI chr 3:2,490,496...2,502,247
Ensembl chr 3:2,490,518...2,502,248
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta involved_in IMP PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr14:86,208,876...86,297,727
Ensembl chr14:86,208,901...86,297,652
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009363|PMID:19900895)
UniProt
RGD
PMID:19900895 GO_REF:0000024 MGI:5009363 NCBI chr 5:137,260,728...137,264,931
Ensembl chr 5:137,260,739...137,265,015
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5486089|PMID:23326475)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23326475 GO_REF:0000024 GO_REF:0000107 MGI:5486089 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5300629|PMID:22153079) RGD PMID:22153079 MGI:5300629 NCBI chr 1:266,953,006...267,038,879
Ensembl chr 1:266,952,561...267,038,883
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3621523|PMID:16504944)
UniProt
RGD
PMID:16504944 GO_REF:0000024 MGI:3621523 NCBI chr10:86,280,865...86,282,681
Ensembl chr10:86,280,892...86,282,693
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:4365478|PMID:19567877)
BHF-UCL
RGD
PMID:19567877 GO_REF:0000024 MGI:4365478 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:3765383|PMID:17229826)
Ensembl
RGD
PMID:17229826 GO_REF:0000107 MGI:3765383 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:33097708)
Ensembl
RGD
PMID:33097708 GO_REF:0000107 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
positive regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk1 calcium/calmodulin-dependent protein kinase I involved_in ISO
ISS
(PMID:18184567)
GO_REF:0000024
RGD
UniProt
PMID:18184567 GO_REF:0000024 NCBI chr 4:145,289,300...145,300,146
Ensembl chr 4:145,288,996...145,300,177
JBrowse link
G Cdc42 cell division cycle 42 IMP RGD PMID:21423166 RGD:5688281 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Frmpd4 FERM and PDZ domain containing 4 involved_in ISO (PMID:19118189) RGD PMID:19118189 NCBI chr  X:27,231,648...28,206,890
Ensembl chr  X:28,072,826...28,204,260
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285139|PMID:21167025)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21167025 GO_REF:0000024 GO_REF:0000107 MGI:5285139 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(MGI:1337916|PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 MGI:1337916 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr 1:239,266,140...239,301,133
Ensembl chr 1:239,266,921...239,301,176
JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:23921129) RGD PMID:23921129 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO UniProtKB:P05067:PRO_0000000092 (PMID:23921129)
(MGI:5514474|PMID:23921129)
RGD PMID:23921129 MGI:5514474 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Homer1 homer scaffold protein 1 involved_in IMP
ISS
PMID:19345194
GO_REF:0000024
UniProt PMID:19345194 GO_REF:0000024, RGD:8553291 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) RGD PMID:26618722 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (MGI:3525751|PMID:15572692) RGD PMID:15572692 MGI:3525751 NCBI chr 9:67,234,612...67,284,504
Ensembl chr 9:67,234,303...67,282,600
JBrowse link
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 IMP RGD PMID:22328515 RGD:13703034 NCBI chr 8:77,107,355...77,237,483
Ensembl chr 8:77,107,536...77,237,483
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in IGI PMID:15537891 ARUK-UCL PMID:15537891 RGD:13210528 NCBI chr 7:115,907,097...115,911,059
Ensembl chr 7:115,907,097...115,910,541
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 IMP RGD PMID:24003235 RGD:13508596 NCBI chr 1:88,977,460...88,990,780
Ensembl chr 1:88,978,344...88,989,552
JBrowse link
G Arhgap44 Rho GTPase activating protein 44 involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5582709|PMID:24352656)
GO_REF:0000107
RGD
Ensembl
PMID:24352656, PMID:21873635 GO_REF:0000107 MGI:5582709, RGD:13792537 NCBI chr10:51,501,547...51,669,546
Ensembl chr10:51,502,894...51,669,297
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:3696283|PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 MGI:3696283 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3696283|PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 MGI:3696283 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cfl1 cofilin 1 involved_in ISO
ISS
(PMID:24464040)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:24464040 GO_REF:0000024 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Dnm3 dynamin 3 IMP RGD PMID:15741233 RGD:8554738 NCBI chr13:79,906,711...80,379,967
Ensembl chr13:79,910,382...80,379,929
JBrowse link
G Epha4 Eph receptor A4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3696283|PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 MGI:3696283 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Kif1a kinesin family member 1A involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IBA
ISO
ISS
PMID:21873635
UniProtKB:P23528 (MGI:5553024|PMID:24464040)
GO_REF:0000024
(PMID:21168496)
RGD
ParkinsonsUK-UCL
PMID:21168496 PMID:24464040, PMID:21873635 GO_REF:0000024 MGI:5553024, RGD:13792537 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IMP
IBA
PMID:27252646
PMID:21873635
UniProt
GO_Central
PMID:27252646, PMID:21873635 RGD:13210540, RGD:13792537 NCBI chr 3:123,174,444...123,185,649
Ensembl chr 3:123,175,860...123,179,644
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5286761|PMID:21808020)
BHF-UCL
RGD
PMID:21808020, PMID:21808020 GO_REF:0000024 MGI:5286761, RGD:8553412 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:247,815,214...247,989,198
Ensembl chr 2:247,818,243...247,988,462
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO (PMID:30021165) RGD PMID:30021165 NCBI chr 7:48,548,932...49,045,852
Ensembl chr 7:48,867,664...49,042,455
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5320264|PMID:21795692)
Ensembl
RGD
PMID:21795692, PMID:21795692 GO_REF:0000107 MGI:5320264, RGD:7349315 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IDA PMID:11502259 UniProt PMID:11502259 RGD:8554032 NCBI chr 6:106,052,212...106,163,249
Ensembl chr 6:106,039,991...106,163,302
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:19146815)
UniProt
RGD
PMID:19146815, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:85,460,059...85,517,671
Ensembl chr10:85,460,059...85,517,683
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr10:93,811,350...94,132,418
Ensembl chr10:93,811,350...94,127,697
JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in IMP PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chr  X:75,433,957...75,566,531
Ensembl chr  X:75,439,778...75,566,481
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6201911|PMID:29742426)
UniProt
RGD
PMID:29742426 GO_REF:0000024 MGI:6201911 NCBI chr 4:145,117,533...145,147,397
Ensembl chr 4:145,117,533...145,147,397
JBrowse link
regulation of modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap2 BAR/IMD domain containing adaptor protein 2 involved_in IMP
IDA
PMID:15673667 SynGO PMID:15673667, PMID:15673667 RGD:9684988, RGD:9684988 NCBI chr10:109,107,326...109,187,458
Ensembl chr10:109,107,389...109,187,115
JBrowse link
G Cttnbp2 cortactin binding protein 2 involved_in IMP
IDA
PMID:22262902 SynGO PMID:22262902, PMID:22262902 RGD:13702362, RGD:13702362 NCBI chr 4:42,932,897...43,096,454
Ensembl chr 4:42,932,903...43,096,399
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (MGI:5515833|PMID:24050404) RGD PMID:24050404 MGI:5515833 NCBI chr 1:114,258,773...114,347,138
Ensembl chr 1:114,258,719...114,347,137
JBrowse link
G Itsn1 intersectin 1 involved_in IDA
IMP
PMID:19258322 SynGO PMID:19258322, PMID:19258322 RGD:13461864, RGD:13461864 NCBI chr11:31,943,119...32,069,249
Ensembl chr11:31,893,489...32,069,249
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in IDA
IMP
PMID:18031682 SynGO PMID:18031682, PMID:18031682 RGD:12050112, RGD:12050112 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IDA
IMP
PMID:16202710 SynGO PMID:16202710, PMID:16202710 RGD:9685333, RGD:9685333 NCBI chr20:42,966,140...42,971,838
Ensembl chr20:42,966,140...42,971,838
JBrowse link
G Myh10 myosin heavy chain 10 involved_in IDA
IMP
PMID:20797537 SynGO PMID:20797537, PMID:20797537 RGD:12050124, RGD:12050124 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:21423166) RGD PMID:21423166 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 involved_in IMP
IDA
PMID:15721239 SynGO PMID:15721239, PMID:15721239 RGD:12050147, RGD:12050147 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link
regulation of modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camkv CaM kinase-like vesicle-associated involved_in IEA
ISO
GO_REF:0000107
(MGI:5905931|PMID:27796283)
Ensembl
RGD
PMID:27796283 GO_REF:0000107 MGI:5905931 NCBI chr 8:116,715,755...116,730,061
Ensembl chr 8:116,715,755...116,730,061
JBrowse link
G Cdc42 cell division cycle 42 involved_in IMP PMID:21423166 SynGO PMID:21423166 RGD:5688281 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IMP
IDA
PMID:25698751 SynGO PMID:25698751, PMID:25698751 RGD:13702150, RGD:13702150 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP
IDA
PMID:23864697 SynGO PMID:23864697, PMID:23864697 RGD:13702314, RGD:13702314 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Myo5b myosin Vb involved_in IMP
IDA
PMID:18984164 SynGO PMID:18984164, PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:70,426,865...70,729,985
Ensembl chr18:70,427,007...70,729,030
JBrowse link
regulation of modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IGI
ISO
PMID:24658113
ComplexPortal:CPX-1134|UniProtKB:Q03137 (MGI:5588508|PMID:24658113)
RGD PMID:24658113, PMID:24658113 MGI:5588508, RGD:12911004 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:6256925|PMID:29780879) RGD PMID:29780879 MGI:6256925 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Epha4 Eph receptor A4 involved_in IGI
ISO
PMID:24658113
ComplexPortal:CPX-1134|UniProtKB:P00520 (MGI:5588508|PMID:24658113)
RGD PMID:24658113, PMID:24658113 MGI:5588508, RGD:12911004 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO (MGI:3590387|PMID:16055059) RGD PMID:16055059 MGI:3590387 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IMP
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723, PMID:21873635 RGD:12050105, RGD:13792537 NCBI chr  X:15,523,929...15,553,702
Ensembl chr  X:15,523,929...15,553,720
JBrowse link
G Rhoa ras homolog family member A involved_in IMP PMID:21423166 SynGO PMID:21423166 RGD:5688281 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
regulation of postsynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in IBA
IMP
IDA
PMID:21873635
PMID:27307232
GO_Central
SynGO
PMID:21873635, PMID:27307232, PMID:27307232 RGD:13792537, RGD:13441201, RGD:13441201 NCBI chr 7:11,992,543...12,000,978
Ensembl chr 7:11,992,543...11,998,973
JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in IDA
IMP
IBA
PMID:27307232
PMID:21873635
SynGO
GO_Central
PMID:27307232, PMID:27307232, PMID:21873635 RGD:13441201, RGD:13441201, RGD:13792537 NCBI chr 1:239,266,140...239,301,133
Ensembl chr 1:239,266,921...239,301,176
JBrowse link
G Abhd17c abhydrolase domain containing 17C, depalmitoylase involved_in IBA
IDA
IMP
PMID:21873635
PMID:27307232
GO_Central
SynGO
PMID:21873635, PMID:27307232, PMID:27307232 RGD:13792537, RGD:13441201, RGD:13441201 NCBI chr 1:146,248,505...146,289,465
Ensembl chr 1:146,248,503...146,289,465
JBrowse link
G Arf4 ADP-ribosylation factor 4 involved_in ISO (MGI:5464048|PMID:23050017) RGD PMID:23050017 MGI:5464048 NCBI chr16:2,338,333...2,354,909
Ensembl chr16:2,338,333...2,354,909
JBrowse link
G Arhgap22 Rho GTPase activating protein 22 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr16:9,454,269...9,613,508
Ensembl chr16:9,486,832...9,613,528
JBrowse link
G Cdkl5 cyclin-dependent kinase-like 5 involved_in ISO (PMID:22922712) RGD PMID:22922712 NCBI chr  X:35,536,396...35,773,204
Ensembl chr  X:35,599,258...35,771,711
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IMP
IDA
PMID:25698751 SynGO PMID:25698751, PMID:25698751 RGD:13702150, RGD:13702150 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp4bl1 chromatin modifying protein 4B-like 1 involved_in IDA
IMP
PMID:25698751 SynGO PMID:25698751, PMID:25698751 RGD:13702150, RGD:13702150 NCBI chr 4:67,059,939...67,060,988
Ensembl chr 4:67,059,939...67,060,974
JBrowse link
G Dgkb diacylglycerol kinase, beta involved_in IEA
ISO
GO_REF:0000107
(MGI:4821044|PMID:20657643)
Ensembl
RGD
PMID:20657643 GO_REF:0000107 MGI:4821044 NCBI chr 6:57,516,351...58,277,385
Ensembl chr 6:57,516,713...58,277,279
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in ISO (MGI:5790738|PMID:26972007) RGD PMID:26972007 MGI:5790738 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Epha7 Eph receptor A7 involved_in ISO (MGI:5565127|PMID:24707048) RGD PMID:24707048 MGI:5565127 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IMP
IDA
PMID:22516464 SynGO PMID:22516464, PMID:22516464 RGD:13702295, RGD:13702295 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in IDA
EXP
PMID:22516464 SynGO PMID:22516464, PMID:22516464 RGD:13702295, RGD:13702295 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IDA
IMP
PMID:24990929 SynGO PMID:24990929, PMID:24990929 RGD:10002784, RGD:10002784 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:6189355|PMID:28234934) RGD PMID:28234934 MGI:6189355 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO
IEA
(PMID:21926414)
GO_REF:0000107
RGD
Ensembl
PMID:21926414 GO_REF:0000107 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5903931|PMID:28604739)
Ensembl
RGD
PMID:28604739 GO_REF:0000107 MGI:5903931 NCBI chr 9:13,845,756...14,015,360
Ensembl chr 9:13,845,757...13,877,130
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA
ISO
GO_REF:0000107
(MGI:5607822|PMID:25143608)
Ensembl
RGD
PMID:25143608 GO_REF:0000107 MGI:5607822 NCBI chr 6:64,297,843...64,867,408
Ensembl chr 6:64,297,888...64,864,996
JBrowse link
G Nrp2 neuropilin 2 involved_in ISO (MGI:4420711|PMID:20010807) RGD PMID:20010807 MGI:4420711 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F involved_in IDA
IMP
PMID:15750591 SynGO PMID:15750591, PMID:15750591 RGD:1642736, RGD:1642736 NCBI chr 5:137,036,936...137,112,930
Ensembl chr 5:137,036,935...137,112,927
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in IDA
IMP
PMID:19734897 SynGO PMID:19734897, PMID:19734897 RGD:2314692, RGD:2314692 NCBI chr 3:58,632,338...58,925,127
Ensembl chr 3:58,632,476...58,924,038
JBrowse link
G Rheb Ras homolog, mTORC1 binding involved_in IDA
IMP
PMID:24889507 SynGO PMID:24889507, PMID:24889507 RGD:13702223, RGD:13702223 NCBI chr 4:6,827,429...6,873,384
Ensembl chr 4:6,827,429...6,873,383
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:4420711|PMID:20010807), (MGI:5607822|PMID:25143608) RGD PMID:20010807 PMID:25143608 MGI:4420711 MGI:5607822 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915
JBrowse link
G Srgn serglycin involved_in ISO (MGI:6189323|PMID:27453502) RGD PMID:27453502 MGI:6189323 NCBI chr20:32,120,317...32,158,071
Ensembl chr20:32,120,320...32,139,789
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in IMP
IDA
PMID:21068316 SynGO PMID:21068316, PMID:21068316 RGD:11353167, RGD:11353167 NCBI chr 3:45,683,773...45,917,687
Ensembl chr 3:45,683,993...45,917,745
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in IMP
IDA
PMID:24889507 SynGO PMID:24889507, PMID:24889507 RGD:13702223, RGD:13702223 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
JBrowse link
G Tsc2_v1 TSC complex subunit 2, variant 1 involved_in IMP
IDA
PMID:24889507 SynGO PMID:24889507, PMID:24889507 RGD:13702223, RGD:13702223
G Tsc2_v2 TSC complex subunit 2, variant 2 involved_in IMP
IDA
PMID:24889507 SynGO PMID:24889507, PMID:24889507 RGD:13702223, RGD:13702223
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (MGI:5790738|PMID:26972007) RGD PMID:26972007 MGI:5790738 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:27402827)
GO_REF:0000107
RGD
Ensembl
PMID:27402827 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (MGI:5014434|PMID:21670302) RGD PMID:21670302 MGI:5014434 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510) RGD PMID:20395510 MGI:4441214 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4441214|PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 MGI:4441214 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835, PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:85,290,887...85,308,498
Ensembl chr 1:85,291,462...85,300,825
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
IMP
IDA
PMID:21873635
PMID:20410109
GO_Central
SynGO
PMID:21873635, PMID:20410109, PMID:20410109 RGD:13792537, RGD:13702463, RGD:13702463 NCBI chr 1:219,850,037...219,855,771
Ensembl chr 1:219,850,037...219,853,329
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495, PMID:21873635, PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:28,012,877...28,017,925
Ensembl chr18:28,012,877...28,017,925
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in IDA
EXP
IMP
PMID:29024665 SynGO PMID:29024665, PMID:29024665, PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:108,682,637...108,691,592
Ensembl chr10:108,682,638...108,691,367
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5294741|PMID:21410790) RGD PMID:21410790 MGI:5294741 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in EXP
IDA
PMID:21262467 SynGO PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in EXP
ISO
IDA
PMID:29024665
(MGI:5315316|PMID:22357843)
RGD PMID:22357843, PMID:29024665, PMID:29024665 MGI:5315316, RGD:13702141, RGD:13702141 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IMP
EXP
IEA
PMID:21262467
(MGI:4887276|PMID:21262467)
GO_REF:0000107
RGD
Ensembl
PMID:21262467, PMID:21262467, PMID:21262467, PMID:21262467 GO_REF:0000107 MGI:4887276, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259, PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:106,052,212...106,163,249
Ensembl chr 6:106,039,991...106,163,302
JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr 6:10,594,147...10,602,103
Ensembl chr 6:10,594,122...10,602,085
JBrowse link
G Dbn1 drebrin 1 IMP RGD PMID:12878700 RGD:10398728 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:162,480,766...162,594,145
Ensembl chr 3:162,480,804...162,581,610
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:19726636) RGD PMID:19726636 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654, PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510), (MGI:5294741|PMID:21410790) RGD PMID:20395510 PMID:21410790 MGI:4441214 MGI:5294741 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Cbln2 cerebellin 2 precursor involved_in ISO (MGI:5294741|PMID:21410790) RGD PMID:21410790 MGI:5294741 NCBI chr18:83,775,568...83,783,841
Ensembl chr18:83,777,665...83,782,930
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303, PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:106,375,298...106,625,837
Ensembl chr15:106,434,177...106,625,837
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6189468|PMID:19883499)
Ensembl
RGD
PMID:19883499 GO_REF:0000107 MGI:6189468 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
PMID:21873635
SynGO
GO_Central
PMID:23911103, PMID:21873635, PMID:23911103 RGD:13702303, RGD:13792537, RGD:13702303 NCBI chr  X:139,354,325...139,464,876
Ensembl chr  X:139,354,155...139,464,798
JBrowse link
G Gpc6 glypican 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:102,164,091...103,174,721
Ensembl chr15:102,164,751...103,170,847
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790, PMID:21410790, PMID:20395510, PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:108,287,034...109,851,075
Ensembl chr  X:108,287,068...109,851,047
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238, PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:88,819,439...88,827,002
Ensembl chr 1:88,819,445...88,826,302
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109, PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 1:219,850,037...219,855,771
Ensembl chr 1:219,850,037...219,853,329
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109, PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 6:83,082,593...83,438,601
Ensembl chr 6:83,083,740...83,438,601
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495, PMID:21873635, PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (MGI:6109768|PMID:27608760) RGD PMID:27608760 MGI:6109768 NCBI chr 6:88,442,620...89,292,454
Ensembl chr 6:88,447,749...88,917,070
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652, PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5294741|PMID:21410790), (MGI:6189347|PMID:17360903) RGD PMID:17360903 PMID:21410790 MGI:5294741 MGI:6189347 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in EXP
IDA
IMP
PMID:21262467 SynGO PMID:21262467, PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(MGI:5776681|PMID:22286174)
RGD PMID:22286174 PMID:23345436 MGI:5776681 NCBI chr 2:170,446,582...170,461,513
Ensembl chr 2:170,452,702...170,460,754
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:96,817,907...96,826,760
Ensembl chr15:96,821,832...96,826,653
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Snca synuclein alpha involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:20530549) RGD PMID:20530549 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
regulation of presynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA
IMP
EXP
PMID:10892652 SynGO PMID:10892652, PMID:10892652, PMID:10892652 RGD:13702379, RGD:13702379, RGD:13702379 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (MGI:5515242|PMID:23911104) RGD PMID:23911104 MGI:5515242 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in IMP
IDA
PMID:23595754 SynGO PMID:23595754, PMID:23595754 RGD:13831359, RGD:13831359 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (MGI:3699474|PMID:17301182) RGD PMID:17301182 MGI:3699474 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:3693132|PMID:17122040) RGD PMID:17122040 MGI:3693132 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within ISO MGI:3040440 (MGI:3696310|PMID:17060947) RGD PMID:17060947 MGI:3696310 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2655232|MGI:2655237 (MGI:2654367|PMID:12657691) RGD PMID:12657691 MGI:2654367 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (MGI:5515243|PMID:23911103) RGD PMID:23911103 MGI:5515243 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3804504|PMID:18599438) RGD PMID:18599438 MGI:3804504 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:11827984 RGD:1599809 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G Negr1 neuronal growth regulator 1 IMP RGD PMID:18602091 RGD:40886282 NCBI chr 2:262,914,240...263,650,441
Ensembl chr 2:262,914,327...263,650,441
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872, PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:28,835,391...29,015,552
Ensembl chr18:28,835,417...29,015,552
JBrowse link
G Ntn1 netrin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5538415|PMID:24174661)
Ensembl
RGD
PMID:24174661 GO_REF:0000107 MGI:5538415 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:247,815,214...247,989,198
Ensembl chr 2:247,818,243...247,988,462
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5487509|PMID:22291024) RGD PMID:22291024 MGI:5487509 NCBI chr 9:98,118,907...98,131,883
Ensembl chr 9:98,118,908...98,131,883
JBrowse link
G Setd5 SET domain containing 5 involved_in ISO (MGI:6381850|PMID:31515109) RGD PMID:31515109 MGI:6381850 NCBI chr 4:145,017,549...145,095,247
Ensembl chr 4:145,017,608...145,095,245
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:129,697,408...129,788,417
Ensembl chr 3:129,599,353...129,788,400
JBrowse link
regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn1 calsyntenin 1 involved_in ISO (MGI:5581343|PMID:24966372) RGD PMID:24966372 MGI:5581343 NCBI chr 5:166,533,262...166,601,686
Ensembl chr 5:166,533,181...166,601,684
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4441254|PMID:17825401) RGD PMID:17825401 MGI:4441254 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872, PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:28,835,391...29,015,552
Ensembl chr18:28,835,417...29,015,552
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta involved_in ISO
IEA
(PMID:16959763)
GO_REF:0000107
RGD
Ensembl
PMID:16959763 GO_REF:0000107 NCBI chr 7:75,573,553...75,598,295
Ensembl chr 7:75,574,967...75,597,276
JBrowse link
regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:3628965|PMID:15034585) RGD PMID:15034585 MGI:3628965 NCBI chr 4:107,880,611...109,042,724
Ensembl chr 4:107,881,826...108,008,484
JBrowse link
G Dmpk DM1 protein kinase involved_in ISO (MGI:3608373|PMID:12612014) RGD PMID:12612014 MGI:3608373 NCBI chr 1:79,988,096...79,999,358
Ensembl chr 1:79,989,019...79,999,364
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:22216301 RGD:6907446 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Ncan neurocan acts_upstream_of_or_within ISO MGI:2182149 (MGI:2148397|PMID:11486035) RGD PMID:11486035 MGI:2148397 NCBI chr16:21,050,243...21,076,707
Ensembl chr16:21,050,243...21,076,707
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2136176 (MGI:1891559|PMID:11018052)
Ensembl
RGD
PMID:11018052 GO_REF:0000107 MGI:1891559 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857733 (MGI:4431306|PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 MGI:4431306 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1929066 (MGI:80613|PMID:8653786)
UniProt
RGD
PMID:8653786 GO_REF:0000024 MGI:80613 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IDA
IMP
PMID:27480238 SynGO PMID:27480238, PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:88,819,439...88,827,002
Ensembl chr 1:88,819,445...88,826,302
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IMP
IDA
PMID:23751499 SynGO PMID:23751499, PMID:23751499 RGD:13702234, RGD:13702234 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
GO_REF:0000107
(MGI:6189514|PMID:17988630)
Ensembl
RGD
PMID:17988630 GO_REF:0000107 MGI:6189514 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (MGI:6109768|PMID:27608760) RGD PMID:27608760 MGI:6109768 NCBI chr 6:88,442,620...89,292,454
Ensembl chr 6:88,447,749...88,917,070
JBrowse link
G Pcdh8 protocadherin 8 involved_in IDA
IMP
PMID:17988630 SynGO PMID:17988630, PMID:17988630 RGD:13702360, RGD:13702360 NCBI chr15:62,196,469...62,201,498
Ensembl chr15:62,197,060...62,200,837
JBrowse link
G Taok2 TAO kinase 2 involved_in IDA
IMP
PMID:17988630 SynGO PMID:17988630, PMID:17988630 RGD:13702360, RGD:13702360 NCBI chr 1:198,301,789...198,354,601
Ensembl chr 1:198,301,938...198,320,075
JBrowse link
regulation of terminal button organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn3 neuroligin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5286761|PMID:21808020)
BHF-UCL
RGD
PMID:21808020, PMID:21808020 GO_REF:0000024 MGI:5286761, RGD:8553412 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:22851330 RGD:13506174 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:22851330 RGD:13506174 NCBI chr 8:94,447,558...94,564,772
Ensembl chr 8:94,447,550...94,564,525
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) RGD PMID:26618722 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    cellular process 18484
      regulation of cellular process 12327
        regulation of cellular component organization 2572
          regulation of synapse organization 267
            negative regulation of synapse organization + 15
            regulation of modification of synaptic structure + 19
            regulation of neuromuscular junction development + 8
            regulation of postsynapse organization + 114
            regulation of presynapse organization + 41
            regulation of presynaptic membrane organization + 3
            regulation of synapse assembly + 122
            regulation of synapse maturation + 16
            regulation of synapse organization by posttranscriptional regulation of gene expression 0
            regulation of synapse pruning + 1
            regulation of synapse structural plasticity + 9
            regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 19638
    cellular process 18484
      cellular component organization or biogenesis 6708
        cellular component organization 6463
          cell junction organization 795
            synapse organization 508
              regulation of synapse organization 267
                negative regulation of synapse organization + 15
                regulation of modification of synaptic structure + 19
                regulation of neuromuscular junction development + 8
                regulation of postsynapse organization + 114
                regulation of presynapse organization + 41
                regulation of presynaptic membrane organization + 3
                regulation of synapse assembly + 122
                regulation of synapse maturation + 16
                regulation of synapse organization by posttranscriptional regulation of gene expression 0
                regulation of synapse pruning + 1
                regulation of synapse structural plasticity + 9
                regulation of synaptic membrane adhesion 7
paths to the root