Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of viral process
go back to main search page
Accession:GO:0050792 term browser browse the term
Definition:Any process that modulates the rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts.
Synonyms:narrow_synonym: regulation of viral reproduction


show annotations for term's descendants           Sort by:
regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:9060691 RGD:11352687 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740 		JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLT1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) UniProt PMID:18647839 NCBI chr 1:48,058,804...48,066,389
Ensembl chr 1:48,058,804...48,066,609 		JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981 		JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178 		JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336 		JBrowse link
negative regulation of fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CH25H cholesterol 25-hydroxylase involved_in ISO (PMID:32944968), (PMID:33239446) UniProt PMID:32944968 PMID:33239446 NCBI chr26:38,884,356...38,885,728 JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437427|PMID:20686043)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)		 UniProt PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178 		JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350 		JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in IEA TreeGrafter GO_REF:0000118
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808 		JBrowse link
G CBX7 chromobox 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:25,876,022...25,896,284
Ensembl chr10:25,876,016...25,893,501 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363 		JBrowse link
G LOC482454 zinc finger protein 684 acts_upstream_of_or_within ISO (PMID:19270682) MGI PMID:19270682 NCBI chr15:2,476,742...2,502,729
Ensembl chr15:2,477,400...2,503,684 		JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:23,951,704...23,993,620
Ensembl chr26:23,953,130...23,992,431 		JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:18,392,706...18,443,241
Ensembl chr25:18,392,409...18,443,241 		JBrowse link
G RESF1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:6271895 NCBI chr27:16,829,611...16,856,960
Ensembl chr27:16,829,968...16,839,166 		JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) UniProt PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr17:60,035,819...60,069,721
Ensembl chr17:60,037,379...60,069,551 		JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:33,665,231...33,713,264
Ensembl chr20:33,646,000...33,712,936 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19270682) Ensembl
MGI		 PMID:19270682 GO_REF:0000107 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146 		JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151 		JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820 		JBrowse link
G GSN gelsolin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129 		JBrowse link
G LOC119864110 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864111 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864112 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864113 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864114 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119867737 tripartite motif-containing protein 10-like involved_in IEA Ensembl GO_REF:0000107
G LOC119867740 tripartite motif-containing protein 26 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119868908 tripartite motif-containing protein 26-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119877844 leucine-rich repeat-containing protein 15 involved_in IEA Ensembl GO_REF:0000107
G LOC475935 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC475936 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,486,525...25,488,376 JBrowse link
G LOC483396 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,461,913...25,463,021 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25738301) TreeGrafter
MGI		 PMID:25738301 GO_REF:0000118 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC606890 interferon-induced transmembrane protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,459,466...25,461,399 JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:31,332,502...31,345,895
Ensembl chr33:31,332,496...31,342,583 		JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)		 UniProt PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr13:36,926,776...36,930,265
Ensembl chr13:36,925,980...36,974,979 		JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G PTX3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167 		JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G SNX3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chr12:65,252,175...65,294,620
Ensembl chr12:65,252,175...65,294,611 		JBrowse link
G TRIM10 tripartite motif containing 10 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr35:26,349,624...26,357,002
Ensembl chr35:26,350,125...26,356,592 		JBrowse link
G TRIM11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 UniProt PMID:18248090 MGI:5545996 NCBI chr14:640,375...647,427 JBrowse link
G TRIM17 tripartite motif containing 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:633,767...639,543
Ensembl chr14:634,060...647,431 		JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762 		JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753 		JBrowse link
G TRIM59 tripartite motif containing 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:26,495,628...26,509,445
Ensembl chr34:26,497,607...26,498,821 		JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355 		JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in ISO (PMID:16527742) UniProt PMID:16527742
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in ISO (MGI:5486557|PMID:16378963) UniProt PMID:16378963 MGI:5486557 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808 		JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,269,817...51,271,484
Ensembl chr18:51,269,815...51,271,690 		JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)		 UniProt PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852 		JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,494,641...29,537,933
Ensembl chr17:29,496,128...29,537,933 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,584,326...37,595,316 JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:7,668,925...7,727,040
Ensembl chr36:7,649,727...8,261,048 		JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 involved_in ISO (PMID:23774268) UniProt PMID:23774268 NCBI chr28:4,318,616...4,329,811
Ensembl chr28:4,318,732...4,328,785 		JBrowse link
G IFNB1 interferon beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:40,668,295...40,668,855
Ensembl chr11:40,668,295...40,668,855 		JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,511,915...50,544,234
Ensembl chr20:50,515,334...50,544,184 		JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,230,879...56,237,354
Ensembl chr 5:56,236,318...56,404,695 		JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:51,822,642...51,833,665
Ensembl chr 3:51,822,888...51,833,659 		JBrowse link
G LOC119864110 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864111 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864112 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864113 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864114 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC475935 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC475936 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,486,525...25,488,376 JBrowse link
G LOC477518 oligoadenylate synthetase-like 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr26:16,855,386...16,869,102
Ensembl chr26:16,855,386...16,869,102 		JBrowse link
G LOC483396 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,461,913...25,463,021 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC488622 myeloid cell nuclear differentiation antigen involved_in ISO (PMID:22291595) UniProt PMID:22291595 NCBI chr38:22,874,345...22,892,362 JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854), (PMID:21976647) BHF-UCL PMID:19008854 PMID:21976647 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981 		JBrowse link
G LOC606890 interferon-induced transmembrane protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,459,466...25,461,399 JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202 		JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:17,510,209...17,529,286
Ensembl chr24:17,512,761...17,523,807 		JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:24500530)
(PMID:14687945), (PMID:15047845), (PMID:16202617)		 AgBase
UniProt		 PMID:14687945 PMID:15047845 PMID:16202617 PMID:24500530 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350 		JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,544,665...66,565,858
Ensembl chr 2:66,544,677...66,561,560 		JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in ISS
IEA		 UniProt
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000107 GO_REF:0000118 NCBI chr26:10,385,393...10,396,734
Ensembl chr26:10,385,447...10,396,733 		JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,431,881...10,450,085
Ensembl chr26:10,432,042...10,449,009 		JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:10,404,548...10,423,039
Ensembl chr26:10,404,414...10,423,039 		JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr26:16,837,376...16,850,388
Ensembl chr26:16,837,376...16,850,388 		JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,639,938...41,668,972
Ensembl chr23:41,599,843...41,669,112 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G RNASEL ribonuclease L involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:15,978,055...16,001,604
Ensembl chr 7:15,856,151...16,001,569 		JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,488,202...4,508,705
Ensembl chr17:4,487,957...4,507,181 		JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,961,557...50,966,261
Ensembl chr20:50,961,551...50,965,961 		JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,566,030...32,568,406
Ensembl chr24:32,566,026...32,568,420 		JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,941,292...5,029,580
Ensembl chr12:4,917,297...5,030,255 		JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,991,187...15,243,124
Ensembl chr18:14,999,422...15,236,393 		JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124 		JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,598,339...9,660,540
Ensembl chr16:9,598,405...9,664,569 		JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:35,932,037...35,954,170
Ensembl chr24:35,932,523...35,954,170 		JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARK2N arkadia (RNF111) N-terminal like PKA signaling regulator 2N involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,991,197...45,071,723
Ensembl chr 7:44,969,267...45,036,204 		JBrowse link
G CSNK2B casein kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,149,467...1,154,417
Ensembl chr12:1,149,548...1,154,418 		JBrowse link
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773 		JBrowse link
G IL32 interleukin 32 acts_upstream_of ISO (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr 6:38,119,287...38,122,979 JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730 PMID:22347431 NCBI chr 7:80,937,433...80,938,175 JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:25106914) AgBase PMID:25106914 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
negative regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREBBP CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:2151262 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176 		JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202 		JBrowse link
G MBL1 mannose binding lectin 1 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 4:29,419,886...29,424,377 JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXIM1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:18249148) FlyBase PMID:18249148 NCBI chr 9:18,384,811...18,387,981 JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148 PMID:18483487 NCBI chr32:32,421,648...32,439,431
Ensembl chr32:32,421,675...32,439,131 		JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like involved_in ISO (PMID:20943977) UniProt PMID:20943977 NCBI chr18:25,484,731...25,485,927 JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210 		JBrowse link
G SP100 SP100 nuclear antigen involved_in ISO (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr25:42,538,428...42,635,825
Ensembl chr25:42,538,571...42,635,649 		JBrowse link
G TRIM11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 UniProt PMID:18248090 MGI:5545996 NCBI chr14:640,375...647,427 JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:1,877,672...1,893,097
Ensembl chr22:1,871,181...1,910,055 		JBrowse link
G TRIM14 tripartite motif containing 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:55,313,700...55,343,217
Ensembl chr11:55,316,111...55,343,287 		JBrowse link
G TRIM17 tripartite motif containing 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:633,767...639,543
Ensembl chr14:634,060...647,431 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974 		JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754 		JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355 		JBrowse link
G UBP1 upstream binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:3,445,730...3,498,242
Ensembl chr23:3,444,758...3,497,263 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065 		JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627 		JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:29,880,567...29,920,932
Ensembl chr30:29,880,419...29,920,332 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:35,816,224...35,868,791
Ensembl chr24:35,817,664...35,860,021 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655 		JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:18,159,521...18,206,413
Ensembl chr23:18,146,095...18,206,287 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,910,870...40,952,922
Ensembl chr21:40,910,874...40,952,808 		JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:6,594,981...6,621,902
Ensembl chr26:6,595,030...6,620,408 		JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,327,059...80,340,380 JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin involved_in ISO (PMID:11353871), (PMID:15688292)
(PMID:29739904)		 UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061 		JBrowse link
G CD4 CD4 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr27:38,204,003...38,250,771
Ensembl chr27:38,204,003...38,250,771 		JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,357,491...53,368,285
Ensembl chr 3:53,358,045...53,365,423 		JBrowse link
G HLA-DRB1 MHC class II DLA DRB1 beta chain involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr12:2,151,409...2,164,564 JBrowse link
G LGALS1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr10:26,932,351...26,935,580
Ensembl chr10:26,932,301...26,935,646 		JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr 9:42,154,613...42,170,423
Ensembl chr 9:42,154,702...42,170,391 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060 		JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:427,827...436,880
Ensembl chr 9:427,830...436,064 		JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,714,418...29,719,035
Ensembl chr21:29,714,557...29,719,033 		JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:35,933,082...35,968,732 JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,575,068...15,609,819
Ensembl chr 5:15,575,338...15,610,190 		JBrowse link
G TRIM11 tripartite motif containing 11 involved_in ISO (MGI:5545996|PMID:18248090)
(PMID:18248090)		 UniProt PMID:18248090 MGI:5545996 NCBI chr14:640,375...647,427 JBrowse link
G TRIM17 tripartite motif containing 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:633,767...639,543
Ensembl chr14:634,060...647,431 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185 		JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466 		JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999 		JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:38,715,529...38,799,353
Ensembl chr31:38,678,184...38,796,521 		JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:40,554,214...40,571,841
Ensembl chr16:40,555,565...40,571,720 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774 		JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,836,043...6,868,268
Ensembl chr 6:6,836,086...6,868,818 		JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:29,880,567...29,920,932
Ensembl chr30:29,880,419...29,920,332 		JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:54,991,528...55,045,976
Ensembl chr 4:54,994,227...55,017,098 		JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 7:80,937,433...80,938,175 JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19416887) BHF-UCL PMID:19416887 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,925,915...3,062,118
Ensembl chr 7:2,927,326...3,062,348 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:2,563,698...2,580,610
Ensembl chr13:2,564,065...2,580,368 		JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890 		JBrowse link
G PKN2 protein kinase N2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:59,556,668...59,638,626
Ensembl chr 6:59,559,124...59,709,926 		JBrowse link
G PPID peptidylprolyl isomerase D involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:55,781,284...55,794,951
Ensembl chr15:55,781,508...55,794,921 		JBrowse link
G PPIE peptidylprolyl isomerase E involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:3,156,067...3,173,028
Ensembl chr15:3,153,628...3,172,988 		JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:671,323...689,627
Ensembl chr15:671,324...689,544 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,244,330...49,250,058
Ensembl chr20:49,241,358...49,250,039 		JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,941,292...5,029,580
Ensembl chr12:4,917,297...5,030,255 		JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,991,187...15,243,124
Ensembl chr18:14,999,422...15,236,393 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:35,816,224...35,868,791
Ensembl chr24:35,817,664...35,860,021 		JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:1,715,157...1,720,050
Ensembl chr27:1,715,158...1,726,885 		JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,083,979...23,121,269
Ensembl chr33:23,084,919...23,116,210 		JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (PMID:22539786) MGI PMID:22539786 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466 		JBrowse link
G VAPB VAMP associated protein B and C involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336 		JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281 		JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960 		JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr20:52,517,759...52,542,085
Ensembl chr20:52,518,036...52,520,942 		JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,476,162...52,480,341
Ensembl chr20:52,476,200...52,479,930 		JBrowse link
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (PMID:28189564) MGI PMID:28189564 NCBI chr 9:12,546,912...12,556,163 JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28189564) MGI
Ensembl		 PMID:28189564 GO_REF:0000107 NCBI chr 2:69,025,409...69,078,635
Ensembl chr 2:69,030,228...69,077,912 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,571,230...8,602,655
Ensembl chr30:8,571,475...8,598,721 		JBrowse link
positive regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,704,716...2,776,518
Ensembl chr20:2,704,752...2,826,636 		JBrowse link
G STOM stomatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:74,270,409...74,284,277
Ensembl chr11:74,270,409...74,284,670 		JBrowse link
G TMEM250 transmembrane protein 250 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,308,397...49,311,360
Ensembl chr 9:49,308,350...49,311,487 		JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 ISO from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chr 2:43,918,210...43,996,817
Ensembl chr 2:43,917,604...43,995,209 		JBrowse link
G MDFIC MyoD family inhibitor domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:54,063,832...54,153,346
Ensembl chr14:54,063,769...54,166,197 		JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) AgBase PMID:21191019 MGI:5693363 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G PFN1 profilin 1 ISO RGD PMID:12740026 RGD:2324854 NCBI chr 5:31,670,483...31,671,891
Ensembl chr 5:31,670,194...31,671,895 		JBrowse link
G RSF1 remodeling and spacing factor 1 involved_in ISO (PMID:11788598) UniProt PMID:11788598 NCBI chr21:20,968,356...21,124,308
Ensembl chr21:20,968,193...21,119,642 		JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,531,062...5,543,034
Ensembl chr11:5,531,759...5,542,743 		JBrowse link
G ATG5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354 		JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:70,137,232...70,387,797
Ensembl chr12:70,140,802...70,388,174 		JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143 		JBrowse link
G PVR PVR cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:110,692,906...110,713,209
Ensembl chr 1:110,697,911...110,754,296 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185 		JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762 		JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,635,177...28,656,759
Ensembl chr21:28,635,396...28,654,490 		JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466 		JBrowse link
G TRIM58 tripartite motif containing 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:1,582,244...1,599,482
Ensembl chr14:1,576,272...1,598,487 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124 		JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754 		JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G DDX5 DEAD-box helicase 5 ISO RGD PMID:19224332 RGD:5128521 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:17613256) MGI PMID:17613256 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:11250896) UniProt PMID:11250896 NCBI chr 7:80,937,433...80,938,175 JBrowse link
G MIR24-1 microRNA mir-24-1 acts_upstream_of_or_within ISO (PMID:17613256) MGI PMID:17613256 NCBI chr 1:71,677,608...71,677,669
Ensembl chr 1:71,677,608...71,677,669 		JBrowse link
G MIR24-2 microRNA mir-24-2 acts_upstream_of_or_within ISO (PMID:17613256) MGI PMID:17613256 NCBI chr20:48,620,684...48,620,745
Ensembl chr20:48,620,674...48,620,745 		JBrowse link
G MIR378 microRNA mir-378 acts_upstream_of_or_within ISO (PMID:17613256) MGI PMID:17613256 NCBI chr 4:59,276,347...59,276,406
Ensembl chr 4:59,276,336...59,276,417 		JBrowse link
G MIR93 microRNA mir-93 acts_upstream_of_or_within ISO (PMID:17613256) MGI PMID:17613256 NCBI chr 6:9,498,780...9,498,840 JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 acts_upstream_of_or_within ISO (PMID:293683) MGI PMID:293683 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808 		JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr34:16,092,172...16,126,563 JBrowse link
regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr27:1,715,157...1,720,050
Ensembl chr27:1,715,158...1,726,885 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    viral process 334
      regulation of viral process 174
        negative regulation of viral process + 101
        positive regulation of viral process + 66
        regulation by virus of viral protein levels in host cell + 8
        regulation of transformation of host cell by virus + 0
        regulation of viral budding via host ESCRT complex + 3
        regulation of viral life cycle + 149
        regulation of viral transcription + 23
        regulation of viral translation + 3
Path 2
Term Annotations click to browse term
  biological_process 17878
    biological regulation 12365
      regulation of biological process 12008
        regulation of viral process 174
          negative regulation of viral process + 101
          positive regulation of viral process + 66
          regulation by virus of viral protein levels in host cell + 8
          regulation of transformation of host cell by virus + 0
          regulation of viral budding via host ESCRT complex + 3
          regulation of viral life cycle + 149
          regulation of viral transcription + 23
          regulation of viral translation + 3
paths to the root