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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of axonogenesis
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Accession:GO:0050770 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron.


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regulation of axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Brsk1 BR serine/threonine kinase 1 ISO (MGI:6148529|PMID:18268107) ARUK-UCL PMID:18268107 MGI:6148529 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISO (MGI:6148529|PMID:18268107) ARUK-UCL PMID:18268107 MGI:6148529 NCBI chrNW_004936816:307,736...335,953 JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO (MGI:54631|PMID:572084) MGI PMID:572084 MGI:54631 NCBI chrNW_004936659:2,201,606...2,269,625 JBrowse link
G Cdh2 cadherin 2 ISO RGD PMID:12657688 RGD:1299191 NCBI chrNW_004936550:6,885,484...7,067,001 JBrowse link
G Chn1 chimerin 1 ISO (MGI:3767884|PMID:17785183)
(MGI:3759704|PMID:17719550)
UniProt PMID:17719550, PMID:17785183 MGI:3759704, MGI:3767884 NCBI chrNW_004936509:4,507,042...4,677,681 JBrowse link
G Efna1 ephrin A1 ISO (MGI:3037383|PMID:14988728) MGI PMID:14988728 MGI:3037383 NCBI chrNW_004936580:4,654,503...4,660,950 JBrowse link
G Epha4 EPH receptor A4 ISO (MGI:3530975|PMID:15537875) UniProt PMID:15537875 MGI:3530975 NCBI chrNW_004936569:3,539,269...3,670,322 JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:3037383|PMID:14988728) MGI PMID:14988728 MGI:3037383 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:3759704|PMID:17719550) UniProt PMID:17719550 MGI:3759704 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO (MGI:3579211|PMID:15745956) MGI PMID:15745956 MGI:3579211 NCBI chrNW_004936669:814,330...838,881 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:15652487 RGD:10045567 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Kif13b kinesin family member 13B ISO (PMID:20194617) UniProtKB PMID:20194617 NCBI chrNW_004936675:1,747,041...1,884,722 JBrowse link
G Lrrc4c leucine rich repeat containing 4C ISO (PMID:14595443) UniProtKB PMID:14595443 NCBI chrNW_004936773:1,147,902...1,152,309 JBrowse link
G Mark2 microtubule affinity regulating kinase 2 ISO (PMID:20194617) UniProtKB PMID:20194617 NCBI chrNW_004936599:5,226,603...5,287,677 JBrowse link
G Pou3f2 POU class 3 homeobox 2 ISO (MGI:77941|PMID:8543156) MGI PMID:8543156 MGI:77941 NCBI chrNW_004936651:494,182...497,109 JBrowse link
G Ret ret proto-oncogene ISO (MGI:3761419|PMID:17553423) MGI PMID:17553423 MGI:3761419 NCBI chrNW_004936617:2,927,185...2,980,594 JBrowse link
G Rufy3 RUN and FYVE domain containing 3 ISO (MGI:5603691|PMID:24720729) MGI PMID:24720729 MGI:5603691 NCBI chrNW_004936598:3,987,287...4,046,019 JBrowse link
G Sipa1l1 signal induced proliferation associated 1 like 1 ISO (MGI:3772555|PMID:18094260) UniProt PMID:18094260 MGI:3772555 NCBI chrNW_004936488:819,503...1,175,043 JBrowse link
G Ust uronyl 2-sulfotransferase ISO (MGI:4836447|PMID:20600662) MGI PMID:20600662 MGI:4836447 NCBI chrNW_004936489:1,866,792...2,133,558 JBrowse link
G Vim vimentin ISO RGD PMID:22371530 RGD:6480474 NCBI chrNW_004936520:10,051,692...10,059,324 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt7a Wnt family member 7A ISO (MGI:1195230|PMID:9405095) MGI PMID:9405095 MGI:1195230 NCBI chrNW_004936898:45,903...70,313 JBrowse link
negative regulation of axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis associated tyrosine kinase ISO (MGI:5426470|PMID:22573681) MGI PMID:22573681 MGI:5426470 NCBI chrNW_004936594:4,863,489...4,896,424 JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:19846719 RGD:11530054 NCBI chrNW_004936469:55,639,345...55,699,330 JBrowse link
G Arhgap4 Rho GTPase activating protein 4 ISO RGD PMID:17804252 RGD:2313143 NCBI chrNW_004936809:791,275...807,448 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO (MGI:5426470|PMID:22573681) MGI PMID:22573681 MGI:5426470 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO (MGI:5426470|PMID:22573681) MGI PMID:22573681 MGI:5426470 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Cdkl3 cyclin dependent kinase like 3 ISO PMID:20347982
(MGI:4835107|PMID:20347982)
MGI PMID:20347982 MGI:4835107, RGD:8693354 NCBI chrNW_004936647:914,057...961,953 JBrowse link
G Draxin dorsal inhibitory axon guidance protein ISO (MGI:4830206|PMID:20621059) MGI PMID:20621059 MGI:4830206 NCBI chrNW_004936474:561,822...571,817 JBrowse link
G Fstl4 follistatin like 4 NOT ISO (MGI:5566541|PMID:24573299) MGI PMID:24573299 MGI:5566541 NCBI chrNW_004936647:1,783,065...1,997,203 JBrowse link
G Ifrd1 interferon related developmental regulator 1 ISO (MGI:3771687|PMID:18052984) MGI PMID:18052984 MGI:3771687 NCBI chrNW_004936795:573,740...594,316 JBrowse link
G Kiaa0319 KIAA0319 ortholog ISO (PMID:28334068) MGI PMID:28334068 NCBI chrNW_004936671:870,107...912,727 JBrowse link
G Mag myelin associated glycoprotein ISO PMID:9298990 UniProt PMID:9298990 RGD:12050149 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Map2 microtubule associated protein 2 ISO PMID:28426968
(MGI:6148385|PMID:28426968)
ARUK-UCL PMID:28426968 MGI:6148385, RGD:13514087 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Mt3 metallothionein 3 ISO (PMID:16601975), (PMID:17712581) UniProtKB PMID:16601975, PMID:17712581 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:3505728|PMID:12852851) MGI PMID:12852851 MGI:3505728 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Ntn1 netrin 1 ISO (MGI:1353949|PMID:10704383) MGI PMID:10704383 MGI:1353949 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S ISO (MGI:4880863|PMID:19780196) UniProt PMID:19780196 MGI:4880863 NCBI chrNW_004936588:3,021,418...3,073,080 JBrowse link
G Rnf6 ring finger protein 6 ISO (MGI:3603857|PMID:16204183) MGI PMID:16204183 MGI:3603857 NCBI chrNW_004936948:57,806...67,875 JBrowse link
G Rtn4 reticulon 4 ISO (PMID:10667797)
(MGI:4830045|PMID:20573699)
UniProtKB
UniProt
PMID:10667797, PMID:20573699 MGI:4830045, RGD:8554113 NCBI chrNW_004936491:1,407,414...1,474,031 JBrowse link
G Rtn4r reticulon 4 receptor ISO (MGI:5688832|PMID:22923615) UniProt PMID:22923615 MGI:5688832 NCBI chrNW_004936619:4,130,757...4,155,885 JBrowse link
G Sema3g semaphorin 3G ISO (MGI:3619679|PMID:16098142) UniProt PMID:16098142 MGI:3619679 NCBI chrNW_004936473:3,272,213...3,284,601 JBrowse link
G Sema4f ssemaphorin 4F ISO PMID:10051670 MGI PMID:10051670 RGD:69991 NCBI chrNW_004936556:873,669...899,400 JBrowse link
G Sema6c semaphorin 6C ISO (PMID:12110693) UniProtKB PMID:12110693 NCBI chrNW_004936580:1,331,950...1,347,327 JBrowse link
G Sema6d semaphorin 6D ISO (PMID:12110693) UniProtKB PMID:12110693 NCBI chrNW_004936471:10,036,279...10,091,699 JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:2683853 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Tnr tenascin R ISO (MGI:3655167|PMID:16831557) MGI PMID:16831557 MGI:3655167 NCBI chrNW_004936481:12,586,460...12,972,348 JBrowse link
G Trim46 tripartite motif containing 46 ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936580:4,678,855...4,690,222 JBrowse link
negative regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 ISO RGD PMID:19884510 RGD:9681717 NCBI chrNW_004936721:757,500...778,416 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:1289520|PMID:9753685) RGD
MGI
PMID:9288754, PMID:9753685 MGI:1289520, RGD:633436 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Plxna3 plexin A3 ISO (MGI:2152659|PMID:11683995) MGI PMID:11683995 MGI:2152659 NCBI chrNW_004936809:1,209,787...1,226,726 JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:3625635|PMID:16723543) MGI PMID:16723543 MGI:3625635 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Sema3f semaphorin 3F ISO (MGI:1289520|PMID:9753685)
(MGI:2152659|PMID:11683995)
MGI PMID:9753685, PMID:11683995 MGI:1289520, MGI:2152659 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
G Sema5a semaphorin 5A ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Slit1 slit guidance ligand 1 ISO RGD PMID:15632296 RGD:1358459 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:3625635|PMID:16723543) MGI PMID:16723543 MGI:3625635 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
negative regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kiaa0319 KIAA0319 ortholog ISO (PMID:28334068)
(MGI:5904726|PMID:28334068)
MGI PMID:28334068 MGI:5904726 NCBI chrNW_004936671:870,107...912,727 JBrowse link
G Tnr tenascin R ISO (MGI:3652670|PMID:16870730) MGI PMID:16870730 MGI:3652670 NCBI chrNW_004936481:12,586,460...12,972,348 JBrowse link
negative regulation of axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 ISO (MGI:4881884|PMID:21111240) MGI PMID:21111240 MGI:4881884 NCBI chrNW_004936522:3,498,395...4,612,560 JBrowse link
G Efnb3 ephrin B3 ISO (MGI:5905553|PMID:12383247) ARUK-UCL PMID:12383247 MGI:5905553 NCBI chrNW_004936595:954,383...960,573 JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:2675767 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Gdi1 GDP dissociation inhibitor 1 ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936809:1,188,793...1,194,816 JBrowse link
G Lrp4 LDL receptor related protein 4 ISO (MGI:5439235|PMID:22854782) UniProt PMID:22854782 MGI:5439235 NCBI chrNW_004936562:2,211,519...2,262,899 JBrowse link
G Mbp myelin basic protein ISO RGD PMID:12210134 RGD:1358766 NCBI chrNW_004936616:2,082,154...2,159,028 JBrowse link
G Psen1 presenilin 1 ISO (MGI:3603707|PMID:15548218) MGI PMID:15548218 MGI:3603707 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:3629385|PMID:16675393) BHF-UCL PMID:16675393 MGI:3629385 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:3056242 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
G Rtn4 reticulon 4 ISO RGD PMID:10667796, PMID:18973596 RGD:2314943, RGD:628417 NCBI chrNW_004936491:1,407,414...1,474,031 JBrowse link
G Rufy3 RUN and FYVE domain containing 3 ISO PMID:17439943 HGNC PMID:17439943 RGD:8554472 NCBI chrNW_004936598:3,987,287...4,046,019 JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 ISO (MGI:3037621|PMID:15014045) MGI PMID:15014045 MGI:3037621 NCBI chrNW_004936476:25,446,524...25,474,793 JBrowse link
G Thy1 Thy-1 cell surface antigen ISO PMID:15547945 UniProt PMID:15547945 RGD:8554523 NCBI chrNW_004936542:4,323,905...4,329,940 JBrowse link
G Trak2 trafficking kinesin protein 2 ISO RGD PMID:23395375 RGD:13208834 NCBI chrNW_004936726:649,413...708,816 JBrowse link
G Tsc2 TSC complex subunit 2 ISO RGD PMID:18794346 RGD:11568688 NCBI chrNW_004936694:1,958,152...1,993,373 JBrowse link
negative regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A ISO (PMID:19616629) BHF-UCL PMID:19616629 NCBI chrNW_004936491:6,021,340...6,118,103 JBrowse link
G Epha7 EPH receptor A7 ISO (MGI:5426777|PMID:19036963) BHF-UCL PMID:19036963 MGI:5426777 NCBI chrNW_004936812:698,548...865,589 JBrowse link
G Fgf13 fibroblast growth factor 13 ISO (MGI:5431268|PMID:22726441) UniProt PMID:22726441 MGI:5431268 NCBI chrNW_004936513:8,419,588...8,911,010 JBrowse link
G Fstl4 follistatin like 4 ISO (MGI:5566541|PMID:24573299) MGI PMID:24573299 MGI:5566541 NCBI chrNW_004936647:1,783,065...1,997,203 JBrowse link
G Ifrd1 interferon related developmental regulator 1 ISO (MGI:3771687|PMID:18052984) MGI PMID:18052984 MGI:3771687 NCBI chrNW_004936795:573,740...594,316 JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S ISO (MGI:5431284|PMID:22519304) UniProt PMID:22519304 MGI:5431284 NCBI chrNW_004936588:3,021,418...3,073,080 JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a ISO RGD PMID:23744345 RGD:9850124 NCBI chrNW_004936483:9,753,112...9,792,817 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:3706258 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO (MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:3706258 NCBI chrNW_004936821:1,051,247...1,162,500 JBrowse link
negative regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spart spartin ISO (MGI:5430704|PMID:22619377) MGI PMID:22619377 MGI:5430704 NCBI chrNW_004936472:30,467,975...30,525,880 JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:15625076 RGD:1581125 NCBI chrNW_004936905:148,956...156,023 JBrowse link
positive regulation of axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adnp activity dependent neuroprotector homeobox ISO RGD PMID:19047645 RGD:2312772 NCBI chrNW_004936514:3,855,113...3,883,036 JBrowse link
G Anapc2 anaphase promoting complex subunit 2 ISO RGD PMID:19167333 RGD:2306262 NCBI chrNW_004936669:797,475...808,952 JBrowse link
G Apoe apolipoprotein E ISO RGD PMID:21040802 RGD:6904146 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chrNW_004936490:12,549,045...12,551,895 JBrowse link
G Bdnf brain derived neurotrophic factor NOT ISO (MGI:5566541|PMID:24573299) MGI PMID:24573299 MGI:5566541 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Cdh4 cadherin 4 ISO (MGI:2679739|PMID:14586016) MGI PMID:14586016 MGI:2679739 NCBI chrNW_004936514:9,284,385...9,679,036 JBrowse link
G Cdkl5 cyclin dependent kinase like 5 ISO PMID:20861382 BHF-UCL PMID:20861382 RGD:8554575 NCBI chrNW_004936844:101,815...271,254 JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:16260607 RGD:11557987 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:19222710 RGD:10395284 NCBI chrNW_004936597:1,735,589...1,751,628 JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta ISO RGD PMID:23616526 RGD:11041877 NCBI chrNW_004936488:4,150,504...4,156,483 JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ISO RGD PMID:23616526 RGD:11041877 NCBI chrNW_004936528:7,563,965...7,574,630 JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:19339625 RGD:2308917 NCBI chrNW_004936492:696,982...778,132 JBrowse link
G Fn1 fibronectin 1 ISO (MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:2683853 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Fxn frataxin ISO RGD PMID:18809400 RGD:2306797 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G Gdi1 GDP dissociation inhibitor 1 ISO RGD PMID:9620768 RGD:13208823 NCBI chrNW_004936809:1,188,793...1,194,816 JBrowse link
G Golga4 golgin A4 ISO (PMID:22705394) UniProtKB PMID:22705394 NCBI chrNW_004936473:26,741,548...26,838,342 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:5568171|PMID:24623780) MGI PMID:24623780 MGI:5568171 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Ilk integrin linked kinase ISO shorter axons following Ilk inhibition or knock-down RGD PMID:17490631 RGD:2301744 NCBI chrNW_004936842:661,961...667,993 JBrowse link
G Islr2 immunoglobulin superfamily containing leucine rich repeat 2 ISO (MGI:4411944|PMID:19755105) UniProt PMID:19755105 MGI:4411944 NCBI chrNW_004936471:33,182,217...33,191,900 JBrowse link
G L1cam L1 cell adhesion molecule ISO PMID:18519736 UniProt PMID:18519736 RGD:10054086 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Limk1 LIM domain kinase 1 ISO (MGI:3603857|PMID:16204183) MGI PMID:16204183 MGI:3603857 NCBI chrNW_004936543:3,190,741...3,208,232 JBrowse link
G LOC101959679 disrupted in schizophrenia 1 protein ISO RGD PMID:17202468 RGD:4107038 NCBI chrNW_004936484:19,151,752...19,237,435 JBrowse link
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:21040802 RGD:6904146 NCBI chrNW_004936646:1,326,900...1,407,236 JBrowse link
G Macf1 microtubule actin crosslinking factor 1 ISO (PMID:22705394) UniProtKB PMID:22705394 NCBI chrNW_004936474:21,053,755...21,401,336 JBrowse link
G Map1b microtubule associated protein 1B ISO RGD PMID:8838670 RGD:2304034 NCBI chrNW_004936549:4,266,371...4,371,579 JBrowse link
G Map3k13 mitogen-activated protein kinase kinase kinase 13 ISO (MGI:5810221|PMID:27511108) ARUK-UCL PMID:27511108 MGI:5810221 NCBI chrNW_004936578:4,363,361...4,461,133 JBrowse link
G Mapt microtubule associated protein tau ISO (PMID:1389180) UniProtKB PMID:1389180 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Myo5b myosin VB ISO RGD PMID:23770993 RGD:11533641 NCBI chrNW_004936497:12,932,367...13,236,916 JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 ISO RGD PMID:17202468 RGD:4107038 NCBI chrNW_004936595:1,656,956...1,692,775 JBrowse link
G Ngf nerve growth factor ISO (MGI:3771687|PMID:18052984)
(MGI:80051|PMID:8861722)
MGI PMID:8861722, PMID:18052984 MGI:3771687, MGI:80051 NCBI chrNW_004936627:635,784...641,290 JBrowse link
G Nrg1 neuregulin 1 NOT ISO (MGI:4461331|PMID:20610754) MGI PMID:20610754 MGI:4461331 NCBI chrNW_004936766:1,104,841...1,306,368 JBrowse link
G Ntn1 netrin 1 ISO PMID:23453953
(MGI:1353949|PMID:10704383)
UniProt
MGI
PMID:10704383, PMID:23453953 MGI:1353949, RGD:10054078 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO RGD PMID:17202468, PMID:17522326 RGD:4107033, RGD:4107038 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO RGD PMID:23453953 RGD:10054078 NCBI chrNW_004936498:6,001,126...6,135,663 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:2429619|PMID:10357904) UniProt PMID:10357904 MGI:2429619 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Rab11a RAB11A, member RAS oncogene family ISO (MGI:5426470|PMID:22573681) MGI PMID:22573681 MGI:5426470 NCBI chrNW_004936471:26,089,216...26,111,245 JBrowse link
G Rpl4 ribosomal protein L4 ISO RGD PMID:10964612 RGD:11039443 NCBI chrNW_004936471:26,635,838...26,641,877 JBrowse link
G Rufy3 RUN and FYVE domain containing 3 ISO (MGI:5603691|PMID:24720729) UniProt PMID:24720729 MGI:5603691 NCBI chrNW_004936598:3,987,287...4,046,019 JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) ISO (PMID:12879062)
(MGI:2683853|PMID:12879062)
UniProtKB
MGI
PMID:12879062 MGI:2683853 NCBI chrNW_004936471:33,430,589...33,454,353 JBrowse link
G Shtn1 shootin 1 ISO PMID:23453953
PMID:18519736
UniProt PMID:18519736, PMID:23453953 RGD:10054078, RGD:10054086 NCBI chrNW_004936486:6,786,037...6,867,221 JBrowse link
G Srf serum response factor ISO (MGI:5568171|PMID:24623780) MGI PMID:24623780 MGI:5568171 NCBI chrNW_004936476:16,779,941...16,789,499 JBrowse link
G Tnfrsf12a TNF receptor superfamily member 12A ISO (MGI:2679391|PMID:14573547) MGI PMID:14573547 MGI:2679391 NCBI chrNW_004936694:1,149,169...1,151,098 JBrowse link
G Trpc5 transient receptor potential cation channel subfamily C member 5 ISO RGD PMID:21984481 RGD:10043835 NCBI chrNW_004936499:3,391,386...3,541,406 JBrowse link
G Trpv2 transient receptor potential cation channel subfamily V member 2 ISO (MGI:4442533|PMID:20357111) DFLAT PMID:20357111 MGI:4442533 NCBI chrNW_004936821:198,622...225,575 JBrowse link
G Zfyve27 zinc finger FYVE-type containing 27 ISO (MGI:5606143|PMID:24251978) UniProt PMID:24251978 MGI:5606143 NCBI chrNW_004936636:1,979,287...2,003,696 JBrowse link
positive regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chrNW_004936726:1,543,263...1,711,422 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:18701697 RGD:2306571 NCBI chrNW_004936617:4,224,131...4,239,080 JBrowse link
G Dscam DS cell adhesion molecule ISO (PMID:18585357)
(MGI:3829111|PMID:18585357)
UniProtKB
UniProt
PMID:18585357 MGI:3829111, RGD:8553710 NCBI chrNW_004936500:2,686,847...3,339,110 JBrowse link
G Megf8 multiple EGF like domains 8 ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chrNW_004936706:157,167...198,071 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5141569|PMID:21658587) BHF-UCL PMID:21658587 MGI:5141569 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Sema5a semaphorin 5A ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Vegfa vascular endothelial growth factor A NOT ISO (MGI:5141569|PMID:21658587) BHF-UCL PMID:21658587 MGI:5141569 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
positive regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntf ciliary neurotrophic factor ISO PMID:16699509 CAFA PMID:16699509 RGD:12793002 NCBI chrNW_004936581:3,710,171...3,715,753 JBrowse link
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:23867460 RGD:13800520 NCBI chrNW_004936646:1,326,900...1,407,236 JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ISO (MGI:3604840|PMID:16142215) MGI PMID:16142215 MGI:3604840 NCBI chrNW_004936483:13,912,904...14,291,881 JBrowse link
G Ocm oncomodulin ISO PMID:16699509 CAFA PMID:16699509 RGD:12793002 NCBI chrNW_004936750:556,912...561,291 JBrowse link
positive regulation of axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:12799140 RGD:1299197 NCBI chrNW_004936543:856,678...862,080 JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 ISO PMID:12629050 UniProt PMID:12629050 RGD:634626 NCBI chrNW_004936704:992,858...998,200 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO (MGI:5582953|PMID:24733831) MGI PMID:24733831 MGI:5582953 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:16260607 RGD:11557987 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Dixdc1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chrNW_004936612:2,440,357...2,518,596 JBrowse link
G Golga2 golgin A2 ISO (MGI:4881884|PMID:21111240) MGI PMID:21111240 MGI:4881884 NCBI chrNW_004936487:15,798,623...15,814,360 JBrowse link
G Ilk integrin linked kinase ISO more cells without axons following Ilk inhibition or knock-down RGD PMID:17490631 RGD:2301744 NCBI chrNW_004936842:661,961...667,993 JBrowse link
G LOC101975744 semaphorin-4D ISO (MGI:3531372|PMID:15330859) MGI PMID:15330859 MGI:3531372 NCBI chrNW_004936780:317,926...350,113 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO (MGI:5582953|PMID:24733831) MGI PMID:24733831 MGI:5582953 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 ISO (MGI:5582953|PMID:24733831) MGI PMID:24733831 MGI:5582953 NCBI chrNW_004936588:2,338,127...2,377,090 JBrowse link
G Map6 microtubule associated protein 6 ISO PMID:28521134 UniProt PMID:28521134 RGD:13441203 NCBI chrNW_004936498:4,360,190...4,439,219 JBrowse link
G Metrn meteorin, glial cell differentiation regulator ISO (MGI:3044244|PMID:15085178) MGI PMID:15085178 MGI:3044244 NCBI chrNW_004936501:295,970...301,344 JBrowse link
G Nefl neurofilament light ISO (MGI:1096547|PMID:7946341) MGI PMID:7946341 MGI:1096547 NCBI chrNW_004936757:1,642,122...1,646,499 JBrowse link
G Nin ninein ISO (MGI:5629993|PMID:25741725) MGI PMID:25741725 MGI:5629993 NCBI chrNW_004936495:14,791,246...14,897,454 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO PMID:10985347 UniProt PMID:10985347 RGD:8553408 NCBI chrNW_004936680:267,850...621,467 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Plxnb1 plexin B1 ISO (MGI:3531372|PMID:15330859) MGI PMID:15330859 MGI:3531372 NCBI chrNW_004936529:197,834...226,064 JBrowse link
G Plxnb2 plexin B2 ISO (MGI:3531372|PMID:15330859) MGI PMID:15330859 MGI:3531372 NCBI chrNW_004936629:521,981...539,475 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO (PMID:12504588) UniProtKB PMID:12504588 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (PMID:12504588) UniProtKB PMID:12504588 NCBI chrNW_004936505:5,544,011...6,747,417 JBrowse link
G Rpl4 ribosomal protein L4 ISO RGD PMID:10964612 RGD:11039443 NCBI chrNW_004936471:26,635,838...26,641,877 JBrowse link
G Rufy3 RUN and FYVE domain containing 3 ISO (MGI:5603691|PMID:24720729) MGI PMID:24720729 MGI:5603691 NCBI chrNW_004936598:3,987,287...4,046,019 JBrowse link
G Shox2 short stature homeobox 2 ISO (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chrNW_004936519:4,810,777...4,818,733 JBrowse link
G Skil SKI like proto-oncogene ISO (PMID:16675394) RGD
UniProtKB
PMID:16675394, PMID:19339625 RGD:2308917 NCBI chrNW_004936593:2,109,414...2,132,871 JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 ISO (PMID:23990902) UniProtKB PMID:23990902 NCBI chrNW_004936696:1,447,644...1,452,612 JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Stk11 serine/threonine kinase 11 ISO (MGI:4881884|PMID:21111240) MGI PMID:21111240 MGI:4881884 NCBI chrNW_004936588:579,816...601,033 JBrowse link
G Stk25 serine/threonine kinase 25 ISO (MGI:4881884|PMID:21111240) MGI PMID:21111240 MGI:4881884 NCBI chrNW_004936745:420,591...426,890 JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO (MGI:3037383|PMID:14988728) RGD
MGI
PMID:11264310, PMID:14988728 MGI:3037383, RGD:10043321 NCBI chrNW_004936500:10,451,599...10,812,239 JBrowse link
G Trak1 trafficking kinesin protein 1 ISO RGD PMID:23395375 RGD:13208834 NCBI chrNW_004936473:30,568,151...30,660,753 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO (MGI:5629993|PMID:25741725) MGI PMID:25741725 MGI:5629993 NCBI chrNW_004936469:32,240,730...32,372,413 JBrowse link
positive regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A ISO (PMID:19616629) BHF-UCL PMID:19616629 NCBI chrNW_004936491:6,021,340...6,118,103 JBrowse link
G Bdnf brain derived neurotrophic factor ISO (PMID:19036963)
(MGI:5566541|PMID:24573299)
BHF-UCL
MGI
PMID:19036963, PMID:24573299 MGI:5566541 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO (MGI:3771687|PMID:18052984) MGI PMID:18052984 MGI:3771687 NCBI chrNW_004936580:5,861,051...5,866,818 JBrowse link
G Dcx doublecortin ISO RGD PMID:19726658 RGD:12904759 NCBI chrNW_004936499:3,905,262...4,004,457 JBrowse link
G Efna5 ephrin A5 ISO (MGI:5426777|PMID:19036963) BHF-UCL PMID:19036963 MGI:5426777 NCBI chrNW_004936531:2,217,467...2,267,265 JBrowse link
G Ist1 IST1 factor associated with ESCRT-III ISO (MGI:5430704|PMID:22619377) MGI PMID:22619377 MGI:5430704 NCBI chrNW_004936475:21,890,011...21,908,256 JBrowse link
G LOC101975744 semaphorin-4D ISO (PMID:19788569) UniProtKB PMID:19788569 NCBI chrNW_004936780:317,926...350,113 JBrowse link
G Lpar3 lysophosphatidic acid receptor 3 ISO (MGI:5490005|PMID:22465231) MGI PMID:22465231 MGI:5490005 NCBI chrNW_004936608:771,618...845,176 JBrowse link
G Ngf nerve growth factor ISO (MGI:3771687|PMID:18052984) MGI PMID:18052984 MGI:3771687 NCBI chrNW_004936627:635,784...641,290 JBrowse link
G Rnd2 Rho family GTPase 2 ISO (MGI:5490005|PMID:22465231) MGI PMID:22465231 MGI:5490005 NCBI chrNW_004936490:17,718,813...17,725,556 JBrowse link
positive regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936864:150,742...179,205 JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:23867460 RGD:13800520 NCBI chrNW_004936646:1,326,900...1,407,236 JBrowse link
G Rtn4 reticulon 4 ISO (MGI:3621687|PMID:12718855) MGI PMID:12718855 MGI:3621687 NCBI chrNW_004936491:1,407,414...1,474,031 JBrowse link
regulation of axon diameter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntn2 contactin 2 ISO (MGI:3804601|PMID:18650339) MGI PMID:18650339 MGI:3804601 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chrNW_004936527:406,061...431,142 JBrowse link
G Nefl neurofilament light ISO (MGI:1100197|PMID:9398473), (MGI:1934092|PMID:11343650) MGI PMID:9398473, PMID:11343650 MGI:1100197, MGI:1934092 NCBI chrNW_004936757:1,642,122...1,646,499 JBrowse link
G Nefm neurofilament medium ISO (MGI:1203441|PMID:9566972)
(MGI:1342909|PMID:10461886)
MGI PMID:9566972, PMID:10461886 MGI:1203441, MGI:1342909 NCBI chrNW_004936757:1,662,905...1,668,707 JBrowse link
G Wnt7a Wnt family member 7A ISO (MGI:1195230|PMID:9405095) MGI PMID:9405095 MGI:1195230 NCBI chrNW_004936898:45,903...70,313 JBrowse link
G Xk X-linked Kx blood group ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chrNW_004936502:4,532,100...4,584,931 JBrowse link
regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO (MGI:5566541|PMID:24573299) MGI PMID:24573299 MGI:5566541 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Fstl4 follistatin like 4 ISO (MGI:5566541|PMID:24573299) MGI PMID:24573299 MGI:5566541 NCBI chrNW_004936647:1,783,065...1,997,203 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12002
    developmental process 5648
      anatomical structure morphogenesis 2521
        regulation of anatomical structure morphogenesis 893
          regulation of axonogenesis 162
            negative regulation of axonogenesis + 56
            positive regulation of axonogenesis + 91
            regulation of axon diameter 6
            regulation of collateral sprouting + 23
Path 2
Term Annotations click to browse term
  biological_process 12002
    developmental process 5648
      anatomical structure development 5286
        multicellular organism development 4845
          system development 4567
            nervous system development 2365
              neurogenesis 1700
                generation of neurons 1563
                  neuron differentiation 1412
                    neuron development 1160
                      neuron projection development 1027
                        axon development 451
                          axonogenesis 398
                            regulation of axonogenesis 162
                              negative regulation of axonogenesis + 56
                              positive regulation of axonogenesis + 91
                              regulation of axon diameter 6
                              regulation of collateral sprouting + 23
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.