ONTOLOGY REPORT - ANNOTATIONS |
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Term: | positive regulation of neurogenesis |
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Accession: | GO:0050769
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browse the term
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Definition: | Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. |
Synonyms: | exact_synonym: | up regulation of neurogenesis; upregulation of neurogenesis |
| narrow_synonym: | activation of neurogenesis; stimulation of neurogenesis |
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Ace |
angiotensin I converting enzyme |
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IMP |
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RGD |
PMID:20122169 |
RGD:2325223 |
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
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Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:3639051|PMID:16469766) |
RGD |
PMID:16469766 |
MGI:3639051 |
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Bmp2 |
bone morphogenetic protein 2 |
acts_upstream_of_or_within |
IDA |
PMID:8616889 |
MGI |
PMID:8616889 |
RGD:8553354 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Cx3cr1 |
C-X3-C motif chemokine receptor 1 |
involved_in |
ISO |
(MGI:6189288|PMID:20018408) |
RGD |
PMID:20018408 |
MGI:6189288 |
NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
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Cxcr4 |
C-X-C motif chemokine receptor 4 |
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IMP |
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RGD |
PMID:28104461 |
RGD:13463105 |
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
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Dll3 |
delta like canonical Notch ligand 3 |
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IDA |
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RGD |
PMID:16144902 |
RGD:1599776 |
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
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Drd2 |
dopamine receptor D2 |
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IDA |
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RGD |
PMID:27638511 |
RGD:13506952 |
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
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Ell3 |
elongation factor for RNA polymerase II 3 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:5438719|PMID:22768269) GO_REF:0000107 |
RGD Ensembl |
PMID:22768269 |
GO_REF:0000107 MGI:5438719 |
NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
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Faim |
Fas apoptotic inhibitory molecule |
involved_in |
IMP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:15520226 PMID:21873635 |
RGD:1357927, RGD:13792537 |
NCBI chr 8:99,543,877...99,569,499
Ensembl chr 8:99,542,405...99,560,562
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Faiml |
Fas apoptotic inhibitory molecule like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:99,791,849...99,810,206
Ensembl chr 8:99,791,981...99,810,228
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Gh1 |
growth hormone 1 |
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IDA |
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RGD |
PMID:19524466 |
RGD:2315620 |
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
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Gper1 |
G protein-coupled estrogen receptor 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5512928|PMID:23545157) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:23545157 |
GO_REF:0000024 GO_REF:0000107 MGI:5512928 |
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
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Gprasp3 |
G protein-coupled receptor associated sorting protein family member 3 |
involved_in |
ISO |
(MGI:5545985|PMID:21199326) |
RGD |
PMID:21199326 |
MGI:5545985 |
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
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Hap1 |
huntingtin-associated protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5560429|PMID:24355921) |
Ensembl RGD |
PMID:24355921 |
GO_REF:0000107 MGI:5560429 |
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
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Ifng |
interferon gamma |
involved_in |
ISO |
UniProtKB:P05067|UniProtKB:P10636|UniProtKB:P49768 (PMID:19808651) |
RGD |
PMID:19808651 |
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NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Jade2 |
jade family PHD finger 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5605922|PMID:25018020) |
RGD |
PMID:25018020 |
MGI:5605922 |
NCBI chr10:36,075,239...36,124,210
Ensembl chr10:36,078,917...36,116,984
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Kdr |
kinase insert domain receptor |
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IEP |
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RGD |
PMID:15258583 |
RGD:1581594 |
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Khdc3 |
KH domain containing 3, subcortical maternal complex member |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6716977|PMID:33115731) |
UniProt RGD |
PMID:33115731 |
GO_REF:0000024 MGI:6716977 |
NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248
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Lig4 |
DNA ligase 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857720|MGI:1857732 (MGI:1913213|PMID:9875844), (MGI:3641390|PMID:10716994), (MGI:3652689|PMID:16777961) |
RGD |
PMID:9875844 PMID:10716994 PMID:16777961 |
MGI:1913213 MGI:3641390 MGI:3652689 |
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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Lrp2 |
LDL receptor related protein 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5908338|PMID:20460439) |
UniProt RGD |
PMID:20460439 |
GO_REF:0000024 MGI:5908338 |
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Man2a1 |
mannosidase, alpha, class 2A, member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2159011|MGI:2673381 (MGI:4453938|PMID:20144606) |
RGD |
PMID:20144606 |
MGI:4453938 |
NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349
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Mir124-1 |
microRNA 124-1 |
acts_upstream_of_or_within |
ISO |
(MGI:3706460|PMID:17403776) |
RGD |
PMID:17403776 |
MGI:3706460 |
NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
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Mir124-2 |
microRNA 124-2 |
acts_upstream_of_or_within |
ISO |
(MGI:3706460|PMID:17403776) |
RGD |
PMID:17403776 |
MGI:3706460 |
NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
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Mir124-3 |
microRNA 124-3 |
acts_upstream_of_or_within |
ISO |
(MGI:3706460|PMID:17403776) |
RGD |
PMID:17403776 |
MGI:3706460 |
NCBI chr 3:168,014,952...168,015,038
Ensembl chr 3:168,014,952...168,015,038
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Mme |
membrane metallo-endopeptidase |
involved_in |
ISO IEA |
UniProtKB:P05067 (PMID:24825898) GO_REF:0000107 |
RGD Ensembl |
PMID:24825898 |
GO_REF:0000107 |
NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
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Mtor |
mechanistic target of rapamycin kinase |
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IMP |
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RGD |
PMID:19474323 |
RGD:10041000 |
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Nap1l1 |
nucleosome assembly protein 1-like 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:6189337|PMID:29490266) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:29490266 |
GO_REF:0000024 GO_REF:0000107 MGI:6189337 |
NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
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Numb |
NUMB, endocytic adaptor protein |
involved_in |
IEA IBA ISO |
GO_REF:0000104 PMID:21873635 (MGI:2389562|PMID:12410312) |
UniProt RGD |
PMID:12410312 PMID:21873635 |
GO_REF:0000104 MGI:2389562, RGD:13792537 |
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
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Numbl |
NUMB-like, endocytic adaptor protein |
involved_in |
ISS IBA ISO IEA |
GO_REF:0000024 PMID:21873635 (MGI:2389562|PMID:12410312) GO_REF:0000104 |
UniProt RGD |
PMID:12410312 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104 MGI:2389562, RGD:13792537 |
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
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Oprm1 |
opioid receptor, mu 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5306306|PMID:16682964) |
UniProt RGD |
PMID:16682964 |
GO_REF:0000024 MGI:5306306 |
NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409
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Rassf10 |
Ras association domain family member 10 |
involved_in |
ISO |
(MGI:6189337|PMID:29490266) |
RGD |
PMID:29490266 |
MGI:6189337 |
NCBI chr 1:167,058,277...167,063,591
Ensembl chr 1:167,058,099...167,063,572
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Rgs14 |
regulator of G-protein signaling 14 |
involved_in |
IMP |
PMID:19319189 |
UniProt |
PMID:19319189 |
RGD:8554645 |
NCBI chr17:9,248,982...9,263,104
Ensembl chr17:9,249,019...9,263,104
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Serpinf1 |
serpin family F member 1 |
involved_in |
ISO |
(PMID:8226833) |
RGD |
PMID:8226833 |
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NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
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Snw1 |
SNW domain containing 1 |
involved_in |
ISO |
(MGI:5315685|PMID:19934264) |
RGD |
PMID:19934264 |
MGI:5315685 |
NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
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Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5285172|PMID:19490090) |
UniProt RGD |
PMID:19490090 |
GO_REF:0000024 MGI:5285172 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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Spen |
spen family transcriptional repressor |
involved_in |
ISO |
(PMID:16287852) |
RGD |
PMID:16287852 |
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NCBI chr 5:153,775,287...153,848,677
Ensembl chr 5:153,776,234...153,848,811
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Srrt |
serrate, RNA effector molecule |
involved_in |
ISO |
(MGI:5306514|PMID:22198669) |
RGD |
PMID:22198669 |
MGI:5306514 |
NCBI chr12:19,392,578...19,406,098
Ensembl chr12:19,392,625...19,406,095
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Star |
steroidogenic acute regulatory protein |
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IMP |
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RGD |
PMID:16579833 |
RGD:1600078 |
NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
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Tgm2 |
transglutaminase 2 |
involved_in |
ISO IEA |
(PMID:30867594) GO_REF:0000107 |
RGD Ensembl |
PMID:30867594 |
GO_REF:0000107 |
NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
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Tle6 |
TLE family member 6, subcortical maternal complex member |
acts_upstream_of_or_within |
ISO |
(MGI:3610698|PMID:16314515) |
RGD |
PMID:16314515 |
MGI:3610698 |
NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639
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Trim32 |
tripartite motif-containing 32 |
involved_in |
ISO |
(MGI:3836317|PMID:19269368) |
RGD |
PMID:19269368 |
MGI:3836317 |
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
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Wnt2 |
Wnt family member 2 |
involved_in |
ISO |
(MGI:4461115|PMID:20018874) |
RGD |
PMID:20018874 |
MGI:4461115 |
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
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Xrcc2 |
X-ray repair cross complementing 2 |
acts_upstream_of_or_within |
ISO |
MGI:3654106 (MGI:3652689|PMID:16777961) |
RGD |
PMID:16777961 |
MGI:3652689 |
NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
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Xrcc4 |
X-ray repair cross complementing 4 |
acts_upstream_of_or_within |
ISO |
MGI:1926771 (MGI:1913213|PMID:9875844) |
RGD |
PMID:9875844 |
MGI:1913213 |
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
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Xrcc5 |
X-ray repair cross complementing 5 |
acts_upstream_of_or_within |
ISO |
MGI:2179987 (MGI:3641390|PMID:10716994) |
RGD |
PMID:10716994 |
MGI:3641390 |
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
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Xrcc6 |
X-ray repair cross complementing 6 |
acts_upstream_of_or_within |
ISO |
MGI:2179954 (MGI:3641390|PMID:10716994) |
RGD |
PMID:10716994 |
MGI:3641390 |
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
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Zfp335 |
zinc finger protein 335 |
involved_in |
ISO IBA |
(PMID:23178126) PMID:21873635 |
RGD |
PMID:23178126 PMID:21873635 |
RGD:13792537 |
NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
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Csf1r |
colony stimulating factor 1 receptor |
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IMP |
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RGD |
PMID:33841088 |
RGD:151665762 |
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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Actr3 |
actin related protein 3 |
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IMP |
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RGD |
PMID:23843614 |
RGD:8553949 |
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
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Bin1 |
bridging integrator 1 |
involved_in |
ISO ISS IEA |
(PMID:10412034) GO_REF:0000024 GO_REF:0000107 |
RGD Alzheimers_University_of_Toronto Ensembl |
PMID:10412034 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
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Bmp2 |
bone morphogenetic protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:99414 (MGI:1343608|PMID:10486560), (MGI:3577784|PMID:15882580) |
Ensembl RGD |
PMID:10486560 PMID:15882580 |
GO_REF:0000107 MGI:1343608 MGI:3577784 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Clcf1 |
cardiotrophin-like cytokine factor 1 |
involved_in |
ISO |
(MGI:5009184|PMID:12090754) |
RGD |
PMID:12090754 |
MGI:5009184 |
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
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Hes1 |
hes family bHLH transcription factor 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:2655020|PMID:12666205) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:12666205 |
GO_REF:0000024 GO_REF:0000107 MGI:2655020 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Id2 |
inhibitor of DNA binding 2 |
acts_upstream_of_or_within |
ISO |
MGI:3830733 (MGI:3829299|PMID:19109490) |
RGD |
PMID:19109490 |
MGI:3829299 |
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
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Il1b |
interleukin 1 beta |
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IDA |
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RGD |
PMID:22270046 |
RGD:6482669 |
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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Il6st |
interleukin 6 cytokine family signal transducer |
acts_upstream_of_or_within |
ISO |
(MGI:1343608|PMID:10486560) |
RGD |
PMID:10486560 |
MGI:1343608 |
NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
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Lif |
LIF, interleukin 6 family cytokine |
acts_upstream_of_or_within |
ISO |
(MGI:1343608|PMID:10486560) |
RGD |
PMID:10486560 |
MGI:1343608 |
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
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Mag |
myelin-associated glycoprotein |
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IDA |
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RGD |
PMID:19349915 |
RGD:9685287 |
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
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Notch1 |
notch receptor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:2655020|PMID:12666205) |
UniProt RGD |
PMID:12666205 |
GO_REF:0000024 MGI:2655020 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Prpf19 |
pre-mRNA processing factor 19 |
acts_upstream_of_or_within |
IMP ISO |
(MGI:3640624|PMID:16352598) |
RGD |
PMID:16352598 PMID:23769735 |
MGI:3640624, RGD:10045891 |
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
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Serpine2 |
serpin family E member 2 |
involved_in |
ISO IEA |
(PMID:1691280) GO_REF:0000107 |
RGD Ensembl |
PMID:1691280 |
GO_REF:0000107 |
NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
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Shh |
sonic hedgehog signaling molecule |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:1337447|PMID:10357934) GO_REF:0000107 |
RGD Ensembl |
PMID:10357934 |
GO_REF:0000107 MGI:1337447 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Adcy10 |
adenylate cyclase 10 |
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IMP |
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RGD |
PMID:22649251 |
RGD:329347828 |
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
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Adnp |
activity-dependent neuroprotector homeobox |
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IDA |
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RGD |
PMID:19047645 |
RGD:2312772 |
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
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Anapc2 |
anaphase promoting complex subunit 2 |
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IMP |
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RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
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Apoe |
apolipoprotein E |
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IDA |
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RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
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Arhgap32 |
Rho GTPase activating protein 32 |
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IMP |
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RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
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G |
Atp5mc1 |
ATP synthase membrane subunit c locus 1 |
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IMP |
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RGD |
PMID:22209705 |
RGD:13800744 |
NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124 Ensembl chr10:81,023,925...81,027,124
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G |
Bdnf |
brain-derived neurotrophic factor |
NOT|acts_upstream_of_or_within |
ISO |
(MGI:5566541|PMID:24573299) |
RGD |
PMID:24573299 |
MGI:5566541 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G |
Cdh4 |
cadherin 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:2679739|PMID:14586016) |
Ensembl RGD |
PMID:14586016 |
GO_REF:0000107 MGI:2679739 |
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
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G |
Cdkl5 |
cyclin-dependent kinase-like 5 |
involved_in |
IBA IMP |
PMID:21873635 PMID:20861382 |
GO_Central BHF-UCL |
PMID:21873635 PMID:20861382 |
RGD:13792537, RGD:8554575 |
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
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G |
Cyfip1 |
cytoplasmic FMR1 interacting protein 1 |
|
IMP |
|
RGD |
PMID:16260607 |
RGD:11557987 |
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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G |
Dbn1 |
drebrin 1 |
involved_in |
IMP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:19222710 PMID:21873635 |
RGD:10395284, RGD:13792537 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
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G |
Dbnl |
drebrin-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
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G |
Disc1 |
DISC1 scaffold protein |
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IMP |
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RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
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G |
Eif2b2 |
eukaryotic translation initiation factor 2B subunit beta |
|
IMP |
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RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
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G |
Eif4g2 |
eukaryotic translation initiation factor 4, gamma 2 |
|
IMP |
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
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G |
Ep300 |
E1A binding protein p300 |
|
IMP |
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RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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G |
Fn1 |
fibronectin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:2683853|PMID:12879062) |
Ensembl RGD |
PMID:12879062 |
GO_REF:0000107 MGI:2683853 |
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
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G |
Fxn |
frataxin |
|
IMP |
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RGD |
PMID:18809400 |
RGD:2306797 |
NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540
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G |
Gdi1 |
GDP dissociation inhibitor 1 |
|
IMP |
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RGD |
PMID:9620768 |
RGD:13208823 |
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
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G |
Golga4 |
golgin A4 |
involved_in |
ISO |
(PMID:22705394) |
RGD |
PMID:22705394 |
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NCBI chr 8:118,208,200...118,285,003
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G |
Gsk3b |
glycogen synthase kinase 3 beta |
acts_upstream_of_or_within |
ISO |
MGI:106658|MGI:98927 (MGI:5568171|PMID:24623780) |
RGD |
PMID:24623780 |
MGI:5568171 |
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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G |
Ilk |
integrin-linked kinase |
|
IMP |
shorter axons following Ilk inhibition or knock-down |
RGD |
PMID:17490631 |
RGD:2301744 |
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
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G |
Islr2 |
immunoglobulin superfamily containing leucine-rich repeat 2 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:4411944|PMID:19755105) |
RGD |
PMID:19755105 PMID:21873635 |
MGI:4411944, RGD:13792537 |
NCBI chr 8:58,608,165...58,616,246
Ensembl chr 8:58,608,709...58,614,650
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G |
L1cam |
L1 cell adhesion molecule |
involved_in |
IMP |
PMID:18519736 |
UniProt |
PMID:18519736 |
RGD:10054086 |
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
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G |
Limk1 |
LIM domain kinase 1 |
involved_in acts_upstream_of_or_within |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 MGI:1921382 (MGI:3603857|PMID:16204183) |
UniProt Ensembl RGD |
PMID:16204183 |
GO_REF:0000024 GO_REF:0000107 MGI:3603857 |
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
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G |
Lrp1 |
LDL receptor related protein 1 |
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IMP |
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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G |
Macf1 |
microtubule-actin crosslinking factor 1 |
involved_in |
ISO |
(PMID:22705394) |
RGD |
PMID:22705394 |
|
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
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G |
Map1b |
microtubule-associated protein 1B |
|
IMP |
|
RGD |
PMID:8838670 |
RGD:2304034 |
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
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G |
Map3k13 |
mitogen-activated protein kinase kinase kinase 13 |
involved_in |
ISO |
(MGI:5810221|PMID:27511108) |
RGD |
PMID:27511108 |
MGI:5810221 |
NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
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G |
Mapt |
microtubule-associated protein tau |
involved_in |
ISO ISS |
(PMID:1389180) GO_REF:0000024 |
RGD UniProt |
PMID:1389180 |
GO_REF:0000024 |
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
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G |
Myo5b |
myosin Vb |
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IMP |
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RGD |
PMID:23770993 |
RGD:11533641 |
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
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G |
Ndel1 |
nudE neurodevelopment protein 1-like 1 |
|
IMP |
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RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
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G |
Ngf |
nerve growth factor |
acts_upstream_of_or_within |
ISO |
(MGI:3771687|PMID:18052984), (MGI:80051|PMID:8861722) |
RGD |
PMID:8861722 PMID:18052984 |
MGI:3771687 MGI:80051 |
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
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G |
Ntn1 |
netrin 1 |
involved_in acts_upstream_of_or_within |
IDA ISO IEA |
PMID:23453953 (MGI:1353949|PMID:10704383) GO_REF:0000107 |
RGD Ensembl |
PMID:10704383 PMID:23453953 |
GO_REF:0000107 MGI:1353949, RGD:10054078 |
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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G |
Pafah1b1 |
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 |
|
IMP |
|
RGD |
PMID:17522326 PMID:17202468 |
RGD:4107033, RGD:4107038 |
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
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G |
Pak1 |
p21 (RAC1) activated kinase 1 |
|
IMP |
|
RGD |
PMID:23453953 |
RGD:10054078 |
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
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G |
Pou4f2 |
POU class 4 homeobox 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:2429619|PMID:10357904) |
UniProt RGD |
PMID:10357904 |
GO_REF:0000024 MGI:2429619 |
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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G |
Rpl4 |
ribosomal protein L4 |
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IMP |
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RGD |
PMID:10964612 |
RGD:11039443 |
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
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G |
Rufy3 |
RUN and FYVE domain containing 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5603691|PMID:24720729) |
UniProt RGD |
PMID:24720729 |
GO_REF:0000024 MGI:5603691 |
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
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G |
Sema7a |
semaphorin 7A (John Milton Hagen blood group) |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:2683853|PMID:12879062) (PMID:12879062) |
RGD |
PMID:12879062 PMID:21873635 |
MGI:2683853, RGD:13792537 |
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
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G |
Shtn1 |
shootin 1 |
involved_in |
IDA |
PMID:23453953 PMID:18519736 |
UniProt |
PMID:23453953 PMID:18519736 |
RGD:10054078, RGD:10054086 |
NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
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G |
Smurf1 |
SMAD specific E3 ubiquitin protein ligase 1 |
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IMP |
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RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
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G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:1861437|MGI:3522206|MGI:98927 (MGI:5568171|PMID:24623780) |
RGD |
PMID:24623780 |
MGI:5568171 |
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
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G |
Tnfrsf12a |
TNF receptor superfamily member 12A |
acts_upstream_of_or_within |
ISO |
(MGI:2679391|PMID:14573547) |
RGD |
PMID:14573547 |
MGI:2679391 |
NCBI chr10:12,707,077...12,709,071
Ensembl chr10:12,689,890...12,709,045
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G |
Trpc5 |
transient receptor potential cation channel, subfamily C, member 5 |
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IMP |
|
RGD |
PMID:21984481 |
RGD:10043835 |
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
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G |
Trpv2 |
transient receptor potential cation channel, subfamily V, member 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4442533|PMID:20357111) |
Ensembl RGD |
PMID:20357111 |
GO_REF:0000107 MGI:4442533 |
NCBI chr10:47,265,524...47,294,263
Ensembl chr10:47,272,931...47,294,260
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G |
Twf2 |
twinfilin actin-binding protein 2 |
involved_in |
ISO |
(PMID:17910947) |
RGD |
PMID:17910947 |
|
NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
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G |
Zfyve27 |
zinc finger FYVE-type containing 27 |
involved_in |
IBA IEA ISO ISS |
PMID:21873635 GO_REF:0000107 (MGI:5606143|PMID:24251978) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:24251978 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107 MGI:5606143, RGD:13792537 |
NCBI chr 1:240,979,831...241,003,193
Ensembl chr 1:240,979,842...241,003,193
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G |
Bmpr2 |
bone morphogenetic protein receptor type 2 |
involved_in |
ISO |
UniProtKB:O35607 (MGI:5551355|PMID:24052814) |
RGD |
PMID:24052814 |
MGI:5551355 |
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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G |
Cxcl12 |
C-X-C motif chemokine ligand 12 |
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IMP |
|
RGD |
PMID:18701697 |
RGD:2306571 |
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
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G |
Dscam |
DS cell adhesion molecule |
involved_in |
ISO IEA IMP |
(PMID:18585357) GO_REF:0000107 (MGI:3829111|PMID:18585357) |
RGD Ensembl |
PMID:18585357 PMID:18585357 |
GO_REF:0000107 MGI:3829111, RGD:8553710 |
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
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G |
Megf8 |
multiple EGF-like-domains 8 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5551355|PMID:24052814) GO_REF:0000107 |
CAFA RGD Ensembl |
PMID:24052814 |
GO_REF:0000024 GO_REF:0000107 MGI:5551355 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
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G |
Nrp1 |
neuropilin 1 |
involved_in |
ISO |
(MGI:5141569|PMID:21658587) |
RGD |
PMID:21658587 |
MGI:5141569 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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G |
Sema5a |
semaphorin 5A |
involved_in |
IMP |
PMID:15603739 |
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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G |
Vegfa |
vascular endothelial growth factor A |
NOT|involved_in |
ISO |
(MGI:5141569|PMID:21658587) |
RGD |
PMID:21658587 |
MGI:5141569 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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G |
Lrp1 |
LDL receptor related protein 1 |
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IDA |
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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G |
Ntrk3 |
neurotrophic receptor tyrosine kinase 3 |
acts_upstream_of_or_within |
ISO |
MGI:97380 (MGI:3604840|PMID:16142215) |
RGD |
PMID:16142215 |
MGI:3604840 |
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
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Ache |
acetylcholinesterase |
|
IMP |
|
RGD |
PMID:12799140 |
RGD:1299197 |
NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
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G |
Amigo1 |
adhesion molecule with Ig like domain 1 |
involved_in |
IDA |
PMID:12629050 |
UniProt |
PMID:12629050 |
RGD:634626 |
NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
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G |
Braf |
B-Raf proto-oncogene, serine/threonine kinase |
acts_upstream_of_or_within |
ISO |
MGI:1346866|MGI:1346867 (MGI:5582953|PMID:24733831) |
RGD |
PMID:24733831 |
MGI:5582953 |
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
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G |
Chodl |
chondrolectin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr11:17,654,137...17,676,450
Ensembl chr11:17,654,206...17,676,441
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G |
Cyfip1 |
cytoplasmic FMR1 interacting protein 1 |
|
IMP |
|
RGD |
PMID:16260607 |
RGD:11557987 |
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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G |
Dixdc1 |
DIX domain containing 1 |
|
IMP |
|
RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
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G |
Golga2 |
golgin A2 |
acts_upstream_of_or_within |
ISO |
(MGI:4881884|PMID:21111240) |
RGD |
PMID:21111240 |
MGI:4881884 |
NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
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G |
Ilk |
integrin-linked kinase |
|
IMP |
more cells without axons following Ilk inhibition or knock-down |
RGD |
PMID:17490631 |
RGD:2301744 |
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
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G |
Map2k1 |
mitogen activated protein kinase kinase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1346867|MGI:88190 (MGI:5582953|PMID:24733831) |
Ensembl RGD |
PMID:24733831 |
GO_REF:0000107 MGI:5582953 |
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
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G |
Map2k2 |
mitogen activated protein kinase kinase 2 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1346866|MGI:88190 (MGI:5582953|PMID:24733831) GO_REF:0000107 |
RGD Ensembl |
PMID:24733831 |
GO_REF:0000107 MGI:5582953 |
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
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G |
Map6 |
microtubule-associated protein 6 |
involved_in |
IMP IBA |
PMID:28521134 PMID:21873635 |
UniProt GO_Central |
PMID:28521134 PMID:21873635 |
RGD:13441203, RGD:13792537 |
NCBI chr 1:153,568,020...153,634,415
Ensembl chr 1:153,568,368...153,634,414
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G |
Metrn |
meteorin, glial cell differentiation regulator |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:3044244|PMID:15085178) |
RGD |
PMID:15085178 PMID:21873635 |
MGI:3044244, RGD:13792537 |
NCBI chr10:14,816,684...14,818,702
Ensembl chr10:14,816,572...14,818,701
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G |
Nefl |
neurofilament light chain |
acts_upstream_of_or_within |
ISO |
(MGI:1096547|PMID:7946341) |
RGD |
PMID:7946341 |
MGI:1096547 |
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
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G |
Nin |
ninein |
acts_upstream_of_or_within |
ISO |
MGI:1344407 (MGI:5629993|PMID:25741725) |
RGD |
PMID:25741725 |
MGI:5629993 |
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
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G |
Nrdc |
nardilysin convertase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4414693|PMID:19935654) |
UniProt RGD |
PMID:19935654 |
GO_REF:0000024 MGI:4414693 |
NCBI chr 5:123,755,807...123,818,910
Ensembl chr 5:123,755,806...123,818,595
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G |
Ntrk2 |
neurotrophic receptor tyrosine kinase 2 |
involved_in |
IMP |
PMID:10985347 |
UniProt |
PMID:10985347 |
RGD:8553408 |
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
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G |
Picalm |
phosphatidylinositol binding clathrin assembly protein |
|
IMP |
|
RGD |
PMID:18842885 |
RGD:8554167 |
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
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G |
Plxna1 |
plexin A1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
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|
G |
Plxna2 |
plexin A2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
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|
G |
Plxna3 |
plexin A3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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|
G |
Plxna4 |
plexin A4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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|
G |
Plxnb1 |
plexin B1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:109244 (MGI:3531372|PMID:15330859) |
RGD |
PMID:15330859 PMID:21873635 |
MGI:3531372, RGD:13792537 |
NCBI chr 8:109,743,470...109,769,153
Ensembl chr 8:109,744,697...109,769,027
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G |
Plxnb2 |
plexin B2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:109244 (MGI:3531372|PMID:15330859) |
RGD |
PMID:15330859 PMID:21873635 |
MGI:3531372, RGD:13792537 |
NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
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|
G |
Plxnb3 |
plexin B3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:151,493,832...151,508,688
Ensembl chr X:151,494,207...151,508,674
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|
G |
Plxnc1 |
plexin C1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779
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|
G |
Plxnd1 |
plexin D1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
|
|
G |
Robo1 |
roundabout guidance receptor 1 |
involved_in |
ISO IEA |
(PMID:12504588) GO_REF:0000107 |
RGD Ensembl |
PMID:12504588 |
GO_REF:0000107 |
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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|
G |
Robo2 |
roundabout guidance receptor 2 |
involved_in |
ISO |
(PMID:12504588) |
RGD |
PMID:12504588 |
|
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
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G |
Rpl4 |
ribosomal protein L4 |
|
IMP |
|
RGD |
PMID:10964612 |
RGD:11039443 |
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
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|
G |
Rufy3 |
RUN and FYVE domain containing 3 |
acts_upstream_of_or_within |
ISO |
(MGI:5603691|PMID:24720729) |
RGD |
PMID:24720729 |
MGI:5603691 |
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
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|
G |
Sema4d |
semaphorin 4D |
acts_upstream_of_or_within |
ISO |
MGI:2154238|MGI:2154239|MGI:97321|MGI:97383 (MGI:3531372|PMID:15330859) |
RGD |
PMID:15330859 |
MGI:3531372 |
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
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|
G |
Shox2 |
SHOX homeobox 2 |
involved_in |
ISO IEA |
(MGI:4946446|PMID:21156168) GO_REF:0000107 |
RGD Ensembl |
PMID:21156168 |
GO_REF:0000107 MGI:4946446 |
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
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|
G |
Skil |
SKI-like proto-oncogene |
involved_in |
IMP ISO |
(PMID:16675394) |
RGD |
PMID:16675394 PMID:19339625 |
RGD:2308917 |
NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
|
|
G |
Slitrk1 |
SLIT and NTRK-like family, member 1 |
involved_in |
ISO |
(PMID:23990902) |
RGD |
PMID:23990902 |
|
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
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|
G |
Snap91 |
synaptosome associated protein 91 |
|
IMP |
|
RGD |
PMID:18842885 |
RGD:8554167 |
NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
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|
G |
Stk11 |
serine/threonine kinase 11 |
acts_upstream_of_or_within |
ISO |
MGI:1891699 (MGI:4881884|PMID:21111240) |
RGD |
PMID:21111240 |
MGI:4881884 |
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
|
|
G |
Stk25 |
serine/threonine kinase 25 |
acts_upstream_of_or_within |
ISO |
MGI:108554|MGI:1341870 (MGI:4881884|PMID:21111240) |
RGD |
PMID:21111240 |
MGI:4881884 |
NCBI chr 9:94,161,834...94,174,095
Ensembl chr 9:94,161,836...94,174,244
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|
G |
Tiam1 |
TIAM Rac1 associated GEF 1 |
acts_upstream_of_or_within involved_in |
IMP ISO IBA |
(MGI:3037383|PMID:14988728) PMID:21873635 |
RGD |
PMID:14988728 PMID:11264310 PMID:21873635 |
MGI:3037383, RGD:10043321, RGD:13792537 |
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
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G |
Tiam2 |
TIAM Rac1 associated GEF 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:43,918,179...44,119,499
Ensembl chr 1:43,918,174...44,119,493
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G |
Trak1 |
trafficking kinesin protein 1 |
|
IMP |
|
RGD |
PMID:23395375 |
RGD:13208834 |
NCBI chr 8:120,984,445...121,139,357
Ensembl chr 8:120,984,431...121,139,367
|
|
G |
Zeb2 |
zinc finger E-box binding homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) |
RGD |
PMID:25741725 |
MGI:5629993 |
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
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G |
Bcl11a |
BCL11 transcription factor A |
involved_in |
ISO |
(PMID:19616629) |
RGD |
PMID:19616629 |
|
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
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|
G |
Bdnf |
brain-derived neurotrophic factor |
involved_in acts_upstream_of_or_within |
ISO IBA IEA |
(PMID:19036963) PMID:21873635 (MGI:5566541|PMID:24573299) GO_REF:0000107 |
RGD Ensembl |
PMID:19036963 PMID:24573299 PMID:21873635 |
GO_REF:0000107 MGI:5566541, RGD:13792537 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G |
Crabp2 |
cellular retinoic acid binding protein 2 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3771687|PMID:18052984) GO_REF:0000107 |
RGD Ensembl |
PMID:18052984 |
GO_REF:0000107 MGI:3771687 |
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
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G |
Dcx |
doublecortin |
|
IMP |
|
RGD |
PMID:19726658 |
RGD:12904759 |
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
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|
G |
Efna5 |
ephrin A5 |
involved_in |
ISO |
(MGI:5426777|PMID:19036963) |
RGD |
PMID:19036963 |
MGI:5426777 |
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
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|
G |
Ist1 |
IST1 factor associated with ESCRT-III |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2139806 (MGI:5430704|PMID:22619377) GO_REF:0000107 |
RGD Ensembl |
PMID:22619377 |
GO_REF:0000107 MGI:5430704 |
NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
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|
G |
Lpar3 |
lysophosphatidic acid receptor 3 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:5490005|PMID:22465231) GO_REF:0000107 |
RGD Ensembl |
PMID:22465231 |
GO_REF:0000107 MGI:5490005 |
NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
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|
G |
Ngf |
nerve growth factor |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:3771687|PMID:18052984) |
RGD |
PMID:18052984 PMID:21873635 |
MGI:3771687, RGD:13792537 |
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
|
|
G |
Rnd2 |
Rho family GTPase 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5490005|PMID:22465231) |
RGD |
PMID:22465231 |
MGI:5490005 |
NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742
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|
G |
Sema4d |
semaphorin 4D |
involved_in |
ISO |
(PMID:19788569) |
RGD |
PMID:19788569 |
|
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
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|
|
G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3806438|PMID:18716223) |
RGD |
PMID:18716223 |
MGI:3806438 |
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
(MGI:3806438|PMID:18716223) |
RGD |
PMID:18716223 |
MGI:3806438 |
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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G |
Lrp1 |
LDL receptor related protein 1 |
|
IDA |
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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|
G |
Rtn4 |
reticulon 4 |
acts_upstream_of_or_within |
ISO |
MGI:3623522 (MGI:3621687|PMID:12718855) |
RGD |
PMID:12718855 |
MGI:3621687 |
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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G |
Ache |
acetylcholinesterase |
|
IMP |
|
RGD |
PMID:12799140 |
RGD:1299197 |
NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
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G |
Actr3 |
actin related protein 3 |
|
IMP |
|
RGD |
PMID:18430734 |
RGD:2306201 |
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
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G |
Afdn |
afadin, adherens junction formation factor |
|
IMP |
|
RGD |
PMID:22948147 |
RGD:13838731 |
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
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|
G |
Akap5 |
A-kinase anchoring protein 5 |
|
IMP |
|
RGD |
PMID:19535604 |
RGD:2313144 |
NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
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G |
Anapc2 |
anaphase promoting complex subunit 2 |
|
IMP |
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
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|
G |
Ankrd27 |
ankyrin repeat domain 27 |
involved_in |
ISO |
(MGI:5490454|PMID:22171327) |
RGD |
PMID:22171327 |
MGI:5490454 |
NCBI chr 1:88,251,216...88,303,615
Ensembl chr 1:88,251,226...88,303,615
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|
G |
Caprin1 |
cell cycle associated protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4888105|PMID:20516077) |
UniProt RGD |
PMID:20516077 |
GO_REF:0000024 MGI:4888105 |
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
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G |
Caprin2 |
caprin family member 2 |
involved_in |
ISO |
(MGI:4888105|PMID:20516077) |
RGD |
PMID:20516077 |
MGI:4888105 |
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
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|
G |
Cdkl3 |
cyclin-dependent kinase-like 3 |
acts_upstream_of_or_within involved_in |
ISO IBA IMP |
(MGI:4835107|PMID:20347982) PMID:21873635 |
RGD |
PMID:20347982 PMID:21873635 PMID:20347982 |
MGI:4835107, RGD:13792537, RGD:8693354 |
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
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|
G |
Cdkl5 |
cyclin-dependent kinase-like 5 |
involved_in |
IMP |
PMID:20861382 |
BHF-UCL |
PMID:20861382 |
RGD:8554575 |
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
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|
G |
Cul7 |
cullin 7 |
involved_in |
ISO IEA IMP |
UniProtKB:D3ZEF4 (PMID:21572988) GO_REF:0000107 |
RGD Ensembl |
PMID:21572988 PMID:21572988 |
GO_REF:0000107, RGD:8554449 |
NCBI chr 9:14,319,102...14,333,035
Ensembl chr 9:14,319,108...14,332,741
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|
G |
Cux1 |
cut-like homeobox 1 |
involved_in |
ISO |
(MGI:4836115|PMID:20510857) |
RGD |
PMID:20510857 |
MGI:4836115 |
NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866
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|
G |
Cux2 |
cut-like homeobox 2 |
involved_in |
ISO |
(MGI:4836115|PMID:20510857) |
RGD |
PMID:20510857 |
MGI:4836115 |
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
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G |
Dlg4 |
discs large MAGUK scaffold protein 4 |
|
IMP |
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
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G |
Epha4 |
Eph receptor A4 |
|
IMP |
|
RGD |
PMID:19414612 |
RGD:5688776 |
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
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|
G |
Fbxo31 |
F-box protein 31 |
involved_in |
IMP |
PMID:23469015 |
CACAO |
PMID:23469015 |
RGD:10047221 |
NCBI chr19:49,624,813...49,656,052
Ensembl chr19:49,627,686...49,656,010
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|
G |
Fbxw8 |
F-box and WD repeat domain containing 8 |
involved_in |
ISO IEA IMP |
(PMID:21572988) GO_REF:0000107 |
RGD Ensembl |
PMID:21572988 PMID:21572988 |
GO_REF:0000107, RGD:8554449 |
NCBI chr12:38,426,466...38,517,076
Ensembl chr12:38,426,444...38,516,424
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G |
Fzd4 |
frizzled class receptor 4 |
|
IMP |
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
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G |
Grip1 |
glutamate receptor interacting protein 1 |
|
IMP |
|
RGD |
PMID:15965473 PMID:25424568 |
RGD:127285651, RGD:11060597 |
NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
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|
G |
Hdac6 |
histone deacetylase 6 |
|
IMP |
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
|
|
G |
Il1rapl1 |
interleukin 1 receptor accessory protein-like 1 |
involved_in |
ISO |
(MGI:5294265|PMID:21940441) |
RGD |
PMID:21940441 |
MGI:5294265 |
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
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|
G |
Ilk |
integrin-linked kinase |
|
IMP |
inhibition in the nucleus accumbens decreases dendrite density of medium spiny neurons neuronal depolarization-induced dendrite initiation and growth |
RGD |
PMID:18602949 PMID:17182785 |
RGD:2301736, RGD:2301767 |
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
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|
G |
Met |
MET proto-oncogene, receptor tyrosine kinase |
|
IMP |
|
RGD |
PMID:18262389 |
RGD:2317458 |
NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
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G |
Myo5b |
myosin Vb |
|
IMP |
|
RGD |
PMID:23554492 |
RGD:11533644 |
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
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|
G |
Numb |
NUMB, endocytic adaptor protein |
|
IMP |
|
RGD |
PMID:16394100 |
RGD:2302413 |
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
|
|
G |
Numbl |
NUMB-like, endocytic adaptor protein |
|
IMP |
|
RGD |
PMID:16394100 |
RGD:2302413 |
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
|
|
G |
Obsl1 |
obscurin like cytoskeletal adaptor 1 |
involved_in |
ISO IMP |
(PMID:21572988) |
RGD |
PMID:21572988 PMID:21572988 |
RGD:8554449 |
NCBI chr 9:76,967,802...76,993,771
Ensembl chr 9:76,974,253...76,993,560
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|
G |
Parp6 |
poly (ADP-ribose) polymerase family, member 6 |
|
IMP |
|
RGD |
PMID:26725726 |
RGD:11571888 |
NCBI chr 8:60,016,594...60,049,108
Ensembl chr 8:60,016,877...60,049,108
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|
G |
Pias2 |
protein inhibitor of activated STAT, 2 |
|
IMP |
|
RGD |
PMID:17855618 |
RGD:2298751 |
NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
|
|
G |
Ptprd |
protein tyrosine phosphatase, receptor type, D |
involved_in |
ISO |
(MGI:5294265|PMID:21940441) |
RGD |
PMID:21940441 |
MGI:5294265 |
NCBI chr 5:90,046,993...90,698,977
Ensembl chr 5:90,048,966...92,369,396
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G |
Ptprf |
protein tyrosine phosphatase, receptor type, F |
|
IMP |
|
RGD |
PMID:15750591 |
RGD:1642736 |
NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
|
|
G |
Rab21 |
RAB21, member RAS oncogene family |
involved_in |
ISO |
(MGI:5490454|PMID:22171327) |
RGD |
PMID:22171327 |
MGI:5490454 |
NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
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G |
Sgk1 |
serum/glucocorticoid regulated kinase 1 |
|
IMP |
|
RGD |
PMID:16049181 |
RGD:1642773 |
NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283
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G |
Sh3glb1 |
SH3 domain -containing GRB2-like endophilin B1 |
|
IMP |
|
RGD |
PMID:18768694 |
RGD:13504749 |
NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
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G |
Smad1 |
SMAD family member 1 |
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IEP |
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RGD |
PMID:15056710 |
RGD:1643236 |
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
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G |
Ss18l1 |
SS18L1 subunit of BAF chromatin remodeling complex |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
PMID:21873635 GO_REF:0000107 (MGI:5504306|PMID:23785148) |
Ensembl RGD |
PMID:23785148 PMID:21873635 |
GO_REF:0000107 MGI:5504306, RGD:13792537 |
NCBI chr 3:167,143,730...167,165,253
Ensembl chr 3:167,143,994...167,165,253
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G |
Tbc1d24 |
TBC1 domain family, member 24 |
|
IMP |
|
RGD |
PMID:24469796 |
RGD:11537391 |
NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
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G |
Tnik |
TRAF2 and NCK interacting kinase |
involved_in |
IMP |
PMID:21048137 |
CACAO |
PMID:21048137 |
RGD:8553980 |
NCBI chr 2:111,184,352...111,587,993
Ensembl chr 2:111,184,387...111,580,750
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G |
Vamp7 |
vesicle-associated membrane protein 7 |
involved_in |
ISO |
(MGI:5490454|PMID:22171327) |
RGD |
PMID:22171327 |
MGI:5490454 |
NCBI chr12:16,728,486...16,764,261
Ensembl chr12:16,728,524...16,764,097
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G |
Wls |
Wnt ligand secretion mediator |
|
IMP |
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
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G |
Wnt5a |
Wnt family member 5A |
|
IMP |
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RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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G |
Actr2 |
actin related protein 2 |
|
IMP |
|
RGD |
PMID:23441206 |
RGD:11530033 |
NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
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G |
Actr3 |
actin related protein 3 |
|
IMP |
|
RGD |
PMID:23441206 |
RGD:11530033 |
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
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G |
Afdn |
afadin, adherens junction formation factor |
|
IMP |
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RGD |
PMID:22948147 |
RGD:13838731 |
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
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G |
Baiap2 |
BAR/IMD domain containing adaptor protein 2 |
|
IMP |
|
RGD |
PMID:15673667 |
RGD:9684988 |
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
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G |
Camk2b |
calcium/calmodulin-dependent protein kinase II beta |
involved_in |
IMP |
PMID:12873385 |
UniProt |
PMID:12873385 |
RGD:8553829 |
NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
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G |
Caprin1 |
cell cycle associated protein 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:4888105|PMID:20516077) |
UniProt Ensembl RGD |
PMID:20516077 |
GO_REF:0000024 GO_REF:0000107 MGI:4888105 |
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
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G |
Caprin2 |
caprin family member 2 |
involved_in |
ISO |
(MGI:4888105|PMID:20516077) |
RGD |
PMID:20516077 |
MGI:4888105 |
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
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G |
Cask |
calcium/calmodulin dependent serine protein kinase |
|
IMP |
|
RGD |
PMID:18606847 |
RGD:11576294 |
NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
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G |
Cux2 |
cut-like homeobox 2 |
involved_in |
ISO |
(MGI:4836115|PMID:20510857) |
RGD |
PMID:20510857 |
MGI:4836115 |
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
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G |
Dbn1 |
drebrin 1 |
involved_in |
IMP ISO ISS IBA IEA |
(MGI:5688247|PMID:25865831) GO_REF:0000024 PMID:21873635 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:25865831 PMID:19174472 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107 MGI:5688247, RGD:10398809, RGD:13792537 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
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G |
Dbnl |
drebrin-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
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G |
Dhx36 |
DEAH-box helicase 36 |
involved_in |
IMP |
PMID:23651854 |
UniProt |
PMID:23651854 |
RGD:13792545 |
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
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G |
Dnm1l |
dynamin 1-like |
|
IMP |
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RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
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G |
Eef2k |
eukaryotic elongation factor-2 kinase |
|
IMP |
|
RGD |
PMID:20427644 |
RGD:10401235 |
NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
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G |
Ephb2 |
Eph receptor B2 |
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IMP |
|
RGD |
PMID:21364901 |
RGD:127285794 |
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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G |
Gprasp3 |
G protein-coupled receptor associated sorting protein family member 3 |
involved_in |
ISO |
(MGI:5545985|PMID:21199326) |
RGD |
PMID:21199326 |
MGI:5545985 |
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
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G |
Itpka |
inositol-trisphosphate 3-kinase A |
acts_upstream_of_or_within |
IMP |
PMID:19890013 |
MGI |
PMID:19890013 |
RGD:8553536 |
NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
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G |
Kalrn |
kalirin, RhoGEF kinase |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:4358076 (MGI:4355773|PMID:19625617) GO_REF:0000107 |
RGD Ensembl |
PMID:19625617 |
GO_REF:0000107 MGI:4355773 |
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
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G |
Lrp8 |
LDL receptor related protein 8 |
involved_in |
ISO |
(MGI:5426130|PMID:21852430) |
RGD |
PMID:21852430 |
MGI:5426130 |
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
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G |
Marcks |
myristoylated alanine rich protein kinase C substrate |
|
IMP |
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RGD |
PMID:16202710 |
RGD:9685333 |
NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
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G |
Mfn1 |
mitofusin 1 |
|
IMP |
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
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G |
Mfn2 |
mitofusin 2 |
|
IMP |
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
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G |
Opa1 |
OPA1, mitochondrial dynamin like GTPase |
|
IMP |
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RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
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G |
Pafah1b1 |
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 |
involved_in |
ISO |
(MGI:5619436|PMID:23483716) |
RGD |
PMID:23483716 |
MGI:5619436 |
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
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G |
Pak3 |
p21 (RAC1) activated kinase 3 |
|
IMP |
|
RGD |
PMID:18481281 |
RGD:7775053 |
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
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G |
Reln |
reelin |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5286805|PMID:21664258), (MGI:5426130|PMID:21852430) |
Ensembl RGD |
PMID:21664258 PMID:21852430 |
GO_REF:0000107 MGI:5286805 MGI:5426130 |
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
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G |
Stau2 |
staufen double-stranded RNA binding protein 2 |
|
IMP |
|
RGD |
PMID:16418534 |
RGD:10043163 |
NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
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G |
Tiam1 |
TIAM Rac1 associated GEF 1 |
|
IMP |
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RGD |
PMID:16474385 |
RGD:10043325 |
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
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G |
Hes1 |
hes family bHLH transcription factor 1 |
|
IMP |
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RGD |
PMID:10839357 |
RGD:704354 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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G |
Il1b |
interleukin 1 beta |
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IDA |
|
RGD |
PMID:23168994 |
RGD:7175538 |
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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G |
Notch1 |
notch receptor 1 |
|
IMP |
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RGD |
PMID:12853432 |
RGD:1358543 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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G |
Ntf3 |
neurotrophin 3 |
|
IDA |
|
RGD |
PMID:15139015 |
RGD:1358328 |
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
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G |
Rnf112 |
ring finger protein 112 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:5524211|PMID:21566658) |
Ensembl RGD |
PMID:21566658 |
GO_REF:0000107 MGI:5524211 |
NCBI chr10:46,121,146...46,126,691
Ensembl chr10:46,121,148...46,126,699
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G |
Rtn4 |
reticulon 4 |
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IDA |
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RGD |
PMID:19379790 |
RGD:2314929 |
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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G |
Spint1 |
serine peptidase inhibitor, Kunitz type 1 |
|
IMP |
|
RGD |
PMID:23409135 |
RGD:10043095 |
NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
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G |
Atxn1 |
ataxin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4462742|PMID:20531390) |
RGD |
PMID:20531390 |
MGI:4462742 |
NCBI chr17:18,737,491...19,142,360
Ensembl chr17:18,737,533...19,142,360
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G |
Cysltr1 |
cysteinyl leukotriene receptor 1 |
|
IMP |
|
RGD |
PMID:17910051 |
RGD:5144007 |
NCBI chr X:71,661,421...71,690,012
Ensembl chr X:71,663,821...71,690,121
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G |
E2f1 |
E2F transcription factor 1 |
|
IMP |
|
RGD |
PMID:21637599 |
RGD:13702469 |
NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
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G |
Egfr |
epidermal growth factor receptor |
|
IMP |
|
RGD |
PMID:10616092 |
RGD:38599219 |
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
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G |
Etv5 |
ETS variant transcription factor 5 |
|
IMP |
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RGD |
PMID:12297104 |
RGD:2316288 |
NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215
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G |
Flt1 |
Fms related receptor tyrosine kinase 1 |
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IMP |
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RGD |
PMID:18482723 |
RGD:10402148 |
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
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G |
Gfap |
glial fibrillary acidic protein |
|
IMP |
|
RGD |
PMID:21250919 |
RGD:6480511 |
NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
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G |
Igf1 |
insulin-like growth factor 1 |
|
IDA |
|
RGD |
PMID:24262632 |
RGD:12904964 |
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
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G |
Il1b |
interleukin 1 beta |
involved_in |
ISO |
UniProtKB:P01375 (PMID:1752215) |
RGD |
PMID:1752215 |
|
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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G |
Il6 |
interleukin 6 |
involved_in |
ISO |
(PMID:2104886) |
RGD |
PMID:2104886 |
|
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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|
G |
Kras |
KRAS proto-oncogene, GTPase |
acts_upstream_of_or_within |
ISO |
MGI:97306 (MGI:3526457|PMID:15665300) |
RGD |
PMID:15665300 |
MGI:3526457 |
NCBI chr 4:178,185,418...178,218,484
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G |
Lta |
lymphotoxin alpha |
|
IMP |
|
RGD |
PMID:11595667 |
RGD:8548857 |
NCBI chr20:3,618,853...3,621,324
Ensembl chr20:3,618,853...3,620,859
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G |
Lyn |
LYN proto-oncogene, Src family tyrosine kinase |
|
IDA |
|
RGD |
PMID:15504915 |
RGD:2303714 |
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
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G |
Mecp2 |
methyl CpG binding protein 2 |
acts_upstream_of_or_within |
ISO |
(MGI:3612318|PMID:15939091) |
RGD |
PMID:15939091 |
MGI:3612318 |
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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G |
Mir125b1 |
microRNA 125b-1 |
involved_in |
ISO |
(PMID:20347935) |
RGD |
PMID:20347935 |
|
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
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G |
Mir125b2 |
microRNA 125b-2 |
involved_in |
ISO |
(PMID:20347935) |
RGD |
PMID:20347935 |
|
NCBI chr11:16,245,620...16,245,707
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G |
Mtor |
mechanistic target of rapamycin kinase |
|
IMP |
|
RGD |
PMID:19576187 |
RGD:10041012 |
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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G |
Myb |
MYB proto-oncogene, transcription factor |
|
IMP |
|
RGD |
PMID:12599418 |
RGD:11532679 |
NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
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G |
Myc |
MYC proto-oncogene, bHLH transcription factor |
|
IMP |
|
RGD |
PMID:9316053 |
RGD:10059624 |
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
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G |
Ntn1 |
netrin 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1927548 (MGI:3616408|PMID:16481423) GO_REF:0000107 |
RGD Ensembl |
PMID:16481423 |
GO_REF:0000107 MGI:3616408 |
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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G |
Plag1 |
PLAG1 zinc finger |
involved_in |
ISO |
(MGI:5285167|PMID:19808959) |
RGD |
PMID:19808959 |
MGI:5285167 |
NCBI chr 5:16,902,057...16,956,727
Ensembl chr 5:16,905,394...16,913,647
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G |
Ppp1cc |
protein phosphatase 1 catalytic subunit gamma |
|
IMP |
|
RGD |
PMID:29033188 |
RGD:13514047 |
NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
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|
G |
Prkch |
protein kinase C, eta |
involved_in |
ISO ISS |
(PMID:10806212) GO_REF:0000024 |
RGD UniProt |
PMID:10806212 |
GO_REF:0000024 |
NCBI chr 6:92,292,000...92,490,663
Ensembl chr 6:92,292,000...92,490,654
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G |
Prkci |
protein kinase C, iota |
involved_in |
ISO ISS |
(PMID:21419810) GO_REF:0000024 |
RGD UniProt |
PMID:21419810 |
GO_REF:0000024 |
NCBI chr 2:112,321,919...112,382,305
Ensembl chr 2:112,321,929...112,382,352
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G |
Ptk2 |
protein tyrosine kinase 2 |
|
IMP |
|
RGD |
PMID:12838510 |
RGD:2292612 |
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
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G |
Slc7a5 |
solute carrier family 7 member 5 |
|
IMP |
|
RGD |
PMID:16496379 |
RGD:151361115 |
NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
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|
G |
Tnf |
tumor necrosis factor |
involved_in |
ISO |
UniProtKB:P01584 (PMID:1752215), (PMID:2104886) |
RGD |
PMID:1752215 PMID:2104886 |
|
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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G |
Tspo |
translocator protein |
|
IDA |
|
RGD |
PMID:18190798 |
RGD:2317142 |
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
|
|
G |
Ufl1 |
Ufm1-specific ligase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4462742|PMID:20531390) |
RGD |
PMID:20531390 |
MGI:4462742 |
NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
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|
G |
Vegfc |
vascular endothelial growth factor C |
acts_upstream_of_or_within |
ISO |
MGI:3026650 (MGI:3620294|PMID:16462734) |
RGD |
PMID:16462734 |
MGI:3620294 |
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
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G |
Vim |
vimentin |
|
IMP |
|
RGD |
PMID:21250919 |
RGD:6480511 |
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
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G |
Il6 |
interleukin 6 |
involved_in |
ISO |
(MGI:5662144|PMID:26134658) |
RGD |
PMID:26134658 |
MGI:5662144 |
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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G |
Sox10 |
SRY-box transcription factor 10 |
involved_in |
ISO |
(MGI:3527299|PMID:15572147) |
RGD |
PMID:15572147 |
MGI:3527299 |
NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
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G |
Sox8 |
SRY-box transcription factor 8 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3527299|PMID:15572147) |
UniProt RGD |
PMID:15572147 |
GO_REF:0000024 MGI:3527299 |
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
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G |
Synj1 |
synaptojanin 1 |
|
IMP |
|
RGD |
PMID:19282871 |
RGD:2312448 |
NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220
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G |
Bdnf |
brain-derived neurotrophic factor |
|
IMP |
|
RGD |
PMID:14699417 |
RGD:4891114 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
|
|
G |
Ephb2 |
Eph receptor B2 |
acts_upstream_of_or_within |
ISO |
MGI:2149765 (MGI:2155573|PMID:11754836) |
RGD |
PMID:11754836 |
MGI:2155573 |
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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G |
Fmr1 |
fragile X messenger ribonucleoprotein 1 |
|
IMP |
|
RGD |
PMID:28894415 |
RGD:38501107 |
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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G |
Grm5 |
glutamate metabotropic receptor 5 |
|
IDA |
|
RGD |
PMID:12740378 |
RGD:731147 |
NCBI chr 1:141,310,069...141,884,980
Ensembl chr 1:141,312,368...141,882,274
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G |
Kdr |
kinase insert domain receptor |
|
IMP |
|
RGD |
PMID:18221855 |
RGD:2292019 |
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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G |
Kit |
KIT proto-oncogene receptor tyrosine kinase |
|
IMP |
|
RGD |
PMID:11112797 |
RGD:2292520 |
NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
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|
G |
Neurl1 |
neuralized E3 ubiquitin protein ligase 1 |
involved_in |
ISO |
(MGI:5300629|PMID:22153079) |
RGD |
PMID:22153079 |
MGI:5300629 |
NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
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|
G |
Nptn |
neuroplastin |
involved_in |
IMP |
PMID:10759566 |
HGNC-UCL |
PMID:10759566 |
RGD:8553916 |
NCBI chr 8:58,996,873...59,063,402
Ensembl chr 8:58,996,887...59,063,401
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|
G |
Shank3 |
SH3 and multiple ankyrin repeat domains 3 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5285139|PMID:21167025) GO_REF:0000024 |
Ensembl RGD BHF-UCL |
PMID:21167025 |
GO_REF:0000024 GO_REF:0000107 MGI:5285139 |
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
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G |
Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6192878|PMID:29909984) |
UniProt RGD |
PMID:29909984 |
GO_REF:0000024 MGI:6192878 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Acan |
aggrecan |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
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|
G |
Aspm |
assembly factor for spindle microtubules |
acts_upstream_of_or_within |
ISO |
MGI:88276 (MGI:5294271|PMID:21937711) |
RGD |
PMID:21937711 |
MGI:5294271 |
NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
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G |
Bcan |
brevican |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
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|
G |
Bex2 |
brain expressed X-linked 2 |
acts_upstream_of_or_within |
IDA |
PMID:16498402 |
MGI |
PMID:16498402 |
RGD:8554704 |
NCBI chr X:99,219,014...99,220,518
Ensembl chr X:99,219,014...99,220,958
|
|
G |
Cdon |
cell adhesion associated, oncogene regulated |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2653120 (MGI:3625667|PMID:16648472) GO_REF:0000107 |
RGD Ensembl |
PMID:16648472 |
GO_REF:0000107 MGI:3625667 |
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
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|
G |
Cip2a |
cellular inhibitor of PP2A |
acts_upstream_of_or_within |
ISO |
(MGI:4459585|PMID:20447748) |
RGD |
PMID:20447748 |
MGI:4459585 |
NCBI chr11:51,792,143...51,823,016
Ensembl chr11:51,795,024...51,822,938
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|
G |
Ctf2 |
cardiotrophin 2 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:182,334,061...182,342,406
Ensembl chr 1:182,333,238...182,342,623
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G |
Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:4941059|PMID:21325504) MGI:1334448 (MGI:5294271|PMID:21937711) |
UniProt Ensembl RGD |
PMID:21325504 PMID:21937711 |
GO_REF:0000024 GO_REF:0000107 MGI:4941059 MGI:5294271 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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G |
Cx3cl1 |
C-X3-C motif chemokine ligand 1 |
|
IDA |
|
RGD |
PMID:20018408 |
RGD:9491804 |
NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
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G |
Cx3cr1 |
C-X3-C motif chemokine receptor 1 |
|
IMP |
|
RGD |
PMID:20018408 |
RGD:9491804 |
NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
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|
G |
Dct |
dopachrome tautomerase |
acts_upstream_of_or_within |
ISO |
(MGI:3701732|PMID:16857183) |
RGD |
PMID:16857183 |
MGI:3701732 |
NCBI chr15:95,062,006...95,100,863
Ensembl chr15:95,062,003...95,100,836
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G |
Disc1 |
DISC1 scaffold protein |
involved_in |
ISO |
(PMID:19303846) (MGI:3841497|PMID:19303846) |
RGD |
PMID:19303846 |
MGI:3841497 |
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
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G |
Dmrta2 |
DMRT-like family A2 |
acts_upstream_of_or_within |
ISO |
MGI:5527461 (MGI:5524255|PMID:23056351) |
RGD |
PMID:23056351 |
MGI:5524255 |
NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
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|
G |
Drd2 |
dopamine receptor D2 |
acts_upstream_of_or_within |
ISO |
(MGI:3710436|PMID:17426594) |
RGD |
PMID:17426594 |
MGI:3710436 |
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
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|
G |
Fgf2 |
fibroblast growth factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:95290 (MGI:3039221|PMID:15051883) |
RGD |
PMID:15051883 |
MGI:3039221 |
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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|
G |
Foxg1 |
forkhead box G1 |
acts_upstream_of_or_within |
ISO |
MGI:1932522 (MGI:3581994|PMID:15893304) |
RGD |
PMID:15893304 |
MGI:3581994 |
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
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G |
Fzd3 |
frizzled class receptor 3 |
involved_in |
ISO |
(MGI:4941059|PMID:21325504) |
RGD |
PMID:21325504 |
MGI:4941059 |
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
|
|
G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856282 (MGI:4837563|PMID:20943929) |
RGD |
PMID:20943929 |
MGI:4837563 |
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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G |
Hapln1 |
hyaluronan and proteoglycan link protein 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:20,631,640...20,696,388
Ensembl chr 2:20,631,640...20,693,777
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|
G |
Hapln2 |
hyaluronan and proteoglycan link protein 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
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G |
Hapln3 |
hyaluronan and proteoglycan link protein 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:133,046,465...133,064,665
Ensembl chr 1:133,046,467...133,080,177
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G |
Hapln4 |
hyaluronan and proteoglycan link protein 4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:19,333,106...19,341,243
Ensembl chr16:19,333,106...19,341,243
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|
G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:103178 (MGI:3695975|PMID:17215402) |
Ensembl RGD |
PMID:17215402 |
GO_REF:0000107 MGI:3695975 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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G |
Id4 |
inhibitor of DNA binding 4 |
acts_upstream_of_or_within |
ISO |
MGI:3579084 (MGI:3577784|PMID:15882580) |
RGD |
PMID:15882580 |
MGI:3577784 |
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
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|
G |
Itgb1 |
integrin subunit beta 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2156945 (MGI:3573843|PMID:15056720) GO_REF:0000107 |
RGD Ensembl |
PMID:15056720 |
GO_REF:0000107 MGI:3573843 |
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
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G |
Kdm1a |
lysine demethylase 1A |
involved_in |
ISO |
(PMID:23400681) |
RGD |
PMID:23400681 |
|
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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G |
Mapk8 |
mitogen-activated protein kinase 8 |
|
IMP |
|
RGD |
PMID:24388750 |
RGD:10047173 |
NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
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G |
Ncan |
neurocan |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
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|
G |
Notch1 |
notch receptor 1 |
involved_in |
IMP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:19109527 PMID:21873635 |
RGD:2325303, RGD:13792537 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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G |
Notch2 |
notch receptor 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
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|
G |
Nr2e1 |
nuclear receptor subfamily 2, group E, member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2176560 (MGI:3624573|PMID:16702404) |
RGD |
PMID:16702404 |
MGI:3624573 |
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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G |
Otp |
orthopedia homeobox |
acts_upstream_of_or_within |
ISO |
MGI:2180541 (MGI:1347696|PMID:10557207) |
RGD |
PMID:10557207 |
MGI:1347696 |
NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359
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G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3784651|PMID:18287938) |
Ensembl RGD |
PMID:18287938 |
GO_REF:0000107 MGI:3784651 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Shh |
sonic hedgehog signaling molecule |
acts_upstream_of_or_within involved_in |
IMP ISO IEA |
MGI:1934268|MGI:3052661 (MGI:2154469|PMID:11748155), (MGI:3608482|PMID:16236765) GO_REF:0000107 |
RGD Ensembl |
PMID:11748155 PMID:16236765 PMID:12469128 |
GO_REF:0000107 MGI:2154469 MGI:3608482, RGD:729868 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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|
G |
Smarcd3 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 |
involved_in |
ISO |
(PMID:18816825) |
RGD |
PMID:18816825 |
|
NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
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G |
Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:88274 (MGI:3619284|PMID:16543460) |
Ensembl RGD |
PMID:16543460 |
GO_REF:0000107 MGI:3619284 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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G |
Sox10 |
SRY-box transcription factor 10 |
acts_upstream_of_or_within |
ISO |
(MGI:3701732|PMID:16857183) |
RGD |
PMID:16857183 |
MGI:3701732 |
NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
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G |
Sox2 |
SRY-box transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:2181440|MGI:3052123|MGI:3625176 (MGI:3051708|PMID:15240551), (MGI:3624065|PMID:16651659) |
RGD |
PMID:15240551 PMID:16651659 |
MGI:3051708 MGI:3624065 |
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
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G |
Vcan |
versican |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
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|
G |
Vegfa |
vascular endothelial growth factor A |
acts_upstream_of_or_within |
ISO |
MGI:106918 (MGI:3695975|PMID:17215402) |
RGD |
PMID:17215402 |
MGI:3695975 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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|
G |
Vegfc |
vascular endothelial growth factor C |
acts_upstream_of_or_within |
IDA |
PMID:16462734 |
MGI |
PMID:16462734 |
RGD:8554518 |
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
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G |
Wdr62 |
WD repeat domain 62 |
|
IMP |
|
RGD |
PMID:24388750 |
RGD:10047173 |
NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637
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G |
Zfp335 |
zinc finger protein 335 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5468205|PMID:23178126) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:23178126 |
GO_REF:0000024 GO_REF:0000107 MGI:5468205 |
NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
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G |
Aspa |
aspartoacylase |
|
IMP |
|
RGD |
PMID:16634055 |
RGD:1599295 |
NCBI chr10:57,891,704...57,945,267
Ensembl chr10:57,892,104...57,945,272
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G |
Clcn2 |
chloride voltage-gated channel 2 |
|
IMP |
|
RGD |
PMID:29344669 |
RGD:213230158 |
NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657
|
|
G |
Cxcr4 |
C-X-C motif chemokine receptor 4 |
involved_in |
ISO |
(MGI:4458974|PMID:20534485) |
RGD |
PMID:20534485 |
MGI:4458974 |
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
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|
G |
Dag1 |
dystroglycan 1 |
|
IMP |
|
RGD |
PMID:17395644 |
RGD:11541054 |
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
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|
G |
Enpp2 |
ectonucleotide pyrophosphatase/phosphodiesterase 2 |
|
IDA |
|
RGD |
PMID:22139091 |
RGD:9685417 |
NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
|
|
G |
Gsx2 |
GS homeobox 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5487482|PMID:23042297) |
RGD |
PMID:23042297 |
MGI:5487482 |
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
|
|
G |
Hdac1 |
histone deacetylase 1 |
acts_upstream_of_or_within |
IMP ISO |
MGI:1097691 (MGI:4359141|PMID:19503085) |
RGD |
PMID:19503085 PMID:22573687 |
MGI:4359141, RGD:9590148 |
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
|
|
G |
Hdac2 |
histone deacetylase 2 |
acts_upstream_of_or_within |
IMP ISO |
MGI:108086 (MGI:4359141|PMID:19503085) |
RGD |
PMID:19503085 PMID:22573687 |
MGI:4359141, RGD:9590148 |
NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
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G |
Il33 |
interleukin 33 |
|
IMP |
|
RGD |
PMID:31165473 |
RGD:40400907 |
NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
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|
G |
Il34 |
interleukin 34 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5805301|PMID:27445335) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:27445335 |
GO_REF:0000024 GO_REF:0000107 MGI:5805301 |
NCBI chr19:38,714,990...38,782,749
Ensembl chr19:38,714,991...38,764,000
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|
G |
Mdk |
midkine |
involved_in |
ISO IEA ISS |
(PMID:27445335) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:27445335 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
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G |
Mir219a1 |
microRNA 219a-1 |
acts_upstream_of_or_within |
ISO |
(MGI:4439416|PMID:20223197) |
RGD |
PMID:20223197 |
MGI:4439416 |
NCBI chr20:4,829,687...4,829,796
Ensembl chr20:4,829,687...4,829,796
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G |
Mir23a |
microRNA 23a |
acts_upstream_of_or_within |
ISO |
(MGI:5516374|PMID:24101522) |
RGD |
PMID:24101522 |
MGI:5516374 |
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
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G |
Mtor |
mechanistic target of rapamycin kinase |
involved_in acts_upstream_of_or_within |
IMP IEA ISO |
GO_REF:0000107 MGI:2179311|MGI:3850506 (MGI:5613833|PMID:25411504) |
Ensembl RGD |
PMID:25411504 PMID:19439614 |
GO_REF:0000107 MGI:5613833, RGD:10040963 |
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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G |
Myrf |
myelin regulatory factor |
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IDA |
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RGD |
PMID:27370227 |
RGD:213230157 |
NCBI chr 1:206,854,175...206,886,276
Ensembl chr 1:206,854,175...206,886,157
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G |
Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1355331 (MGI:2150513|PMID:11566099) |
RGD |
PMID:11566099 |
MGI:2150513 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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G |
Nkx6-1 |
NK6 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1352738 (MGI:3578466|PMID:15629702) |
RGD |
PMID:15629702 |
MGI:3578466 |
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
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G |
Nkx6-2 |
NK6 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1206039 (MGI:3578466|PMID:15629702) |
RGD |
PMID:15629702 |
MGI:3578466 |
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
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Olig2 |
oligodendrocyte transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:97347 (MGI:2150513|PMID:11566099) |
RGD |
PMID:11566099 |
MGI:2150513 |
NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
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G |
Pparg |
peroxisome proliferator-activated receptor gamma |
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IMP |
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RGD |
PMID:18543250 |
RGD:2301878 |
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
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G |
Prmt5 |
protein arginine methyltransferase 5 |
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IMP |
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RGD |
PMID:22041901 |
RGD:9491827 |
NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
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G |
Ptn |
pleiotrophin |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:27445335), (PMID:30667096) |
UniProt Ensembl RGD |
PMID:27445335 PMID:30667096 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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Ptpra |
protein tyrosine phosphatase, receptor type, A |
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IMP |
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RGD |
PMID:19812040 |
RGD:2314625 |
NCBI chr 3:117,650,146...117,759,744
Ensembl chr 3:117,650,183...117,759,728
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G |
Ptprz1 |
protein tyrosine phosphatase, receptor type Z1 |
involved_in |
IMP |
PMID:30667096 |
UniProt |
PMID:30667096 |
RGD:14397553 |
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
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G |
Qki |
QKI, KH domain containing RNA binding |
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IMP |
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RGD |
PMID:17575274 |
RGD:10045992 |
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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G |
Rheb |
Ras homolog, mTORC1 binding |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2179311|MGI:3850507 (MGI:5613833|PMID:25411504) GO_REF:0000107 |
RGD Ensembl |
PMID:25411504 |
GO_REF:0000107 MGI:5613833 |
NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
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G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:1929974|PMID:11171336) |
Ensembl RGD |
PMID:11171336 |
GO_REF:0000107 MGI:1929974 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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G |
Tenm4 |
teneurin transmembrane protein 4 |
involved_in |
ISO |
(MGI:5437806|PMID:22915103) |
RGD |
PMID:22915103 |
MGI:5437806 |
NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144
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G |
Tlr2 |
toll-like receptor 2 |
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IDA |
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RGD |
PMID:21971760 |
RGD:7241097 |
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
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G |
Tnfrsf1b |
TNF receptor superfamily member 1B |
involved_in |
IBA ISO |
PMID:21873635 (MGI:5775216|PMID:27147664) |
RGD |
PMID:27147664 PMID:21873635 |
MGI:5775216, RGD:13792537 |
NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
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Tp73 |
tumor protein p73 |
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IMP |
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RGD |
PMID:14960496 |
RGD:2291843 |
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
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G |
Zfp365 |
zinc finger protein 365 |
involved_in |
IMP IEA ISO |
PMID:24481677 GO_REF:0000107 (MGI:5558972|PMID:24481677) |
Ensembl RGD |
PMID:24481677 PMID:24481677 |
GO_REF:0000107 MGI:5558972, RGD:13210567 |
NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
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G |
Zfp488 |
zinc finger protein 488 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:1355331 (MGI:3655895|PMID:16908628) (MGI:6189284|PMID:22355521) |
RGD |
PMID:16908628 PMID:22355521 |
MGI:3655895 MGI:6189284 |
NCBI chr16:9,283,039...9,293,681
Ensembl chr16:9,283,043...9,293,671
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Gjc2 |
gap junction protein, gamma 2 |
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IMP |
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RGD |
PMID:28278052 |
RGD:13208599 |
NCBI chr10:43,962,642...43,971,358
Ensembl chr10:43,962,642...43,970,467
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G |
Lrp2 |
LDL receptor related protein 2 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5319263|PMID:22354480) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:22354480 |
GO_REF:0000024 GO_REF:0000107 MGI:5319263 |
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Lyn |
LYN proto-oncogene, Src family tyrosine kinase |
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IMP |
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RGD |
PMID:15504915 |
RGD:2303714 |
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
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G |
Nog |
noggin |
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IMP |
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RGD |
PMID:14975730 |
RGD:1358325 |
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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G |
Shh |
sonic hedgehog signaling molecule |
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IDA |
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RGD |
PMID:12237843 |
RGD:2306309 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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G |
Tf |
transferrin |
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IDA |
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RGD |
PMID:23368675 |
RGD:7244376 |
NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
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G |
Bag1 |
BAG cochaperone 1 |
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IMP |
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RGD |
PMID:23108487 |
RGD:13506903 |
NCBI chr 5:56,068,494...56,081,075
Ensembl chr 5:56,068,494...56,081,075
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G |
Dicer1 |
dicer 1 ribonuclease III |
involved_in |
ISO |
(MGI:4454581|PMID:20463238), (MGI:4830414|PMID:20805985) |
RGD |
PMID:20463238 PMID:20805985 |
MGI:4454581 MGI:4830414 |
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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G |
Egr2 |
early growth response 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:1331140|PMID:10068633) |
UniProt RGD |
PMID:10068633 |
GO_REF:0000024 MGI:1331140 |
NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
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G |
Rela |
RELA proto-oncogene, NF-kB subunit |
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IMP |
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RGD |
PMID:18385332 |
RGD:2298785 |
NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
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G |
Gfap |
glial fibrillary acidic protein |
acts_upstream_of_or_within |
ISO |
MGI:1857176 (MGI:3664718|PMID:16988027) |
RGD |
PMID:16988027 |
MGI:3664718 |
NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
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G |
Mir221 |
microRNA 221 |
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IMP |
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RGD |
PMID:22393241 |
RGD:11041067 |
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
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G |
Mir222 |
microRNA 222 |
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IMP |
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RGD |
PMID:22393241 |
RGD:11041067 |
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
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G |
Nrg1 |
neuregulin 1 |
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IMP |
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RGD |
PMID:9417836 |
RGD:10449005 |
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
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Term paths to the root
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