Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of lipoprotein metabolic process
go back to main search page
Accession:GO:0050746 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.
Synonyms:exact_synonym: regulation of lipoprotein metabolism


show annotations for term's descendants           Sort by:
regulation of lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl8 angiopoietin-like 8 acts_upstream_of_or_within
involved_in		 ISO (PMID:23150577)
(MGI:5613455|PMID:24043787)		 RGD PMID:23150577 PMID:24043787 MGI:5613455 NCBI chr 8:20,376,462...20,378,488
Ensembl chr 8:20,376,462...20,378,490 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IMP RGD PMID:17526931 RGD:10400884 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Lipg lipase G, endothelial type acts_upstream_of_or_within ISO MGI:2450672 (MGI:3770473|PMID:17681148) RGD PMID:17681148 MGI:3770473 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260 		JBrowse link
negative regulation of lipoprotein lipid oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apod apolipoprotein D involved_in ISO
ISS
IEA		 (MGI:3829114|PMID:18419796)
GO_REF:0000024
GO_REF:0000107
(PMID:18419796)		 RGD
UniProt
Ensembl		 PMID:18419796 GO_REF:0000024 GO_REF:0000107 MGI:3829114 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305 		JBrowse link
negative regulation of lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin subunit alpha V involved_in ISO (PMID:15215180) RGD PMID:15215180 NCBI chr 3:68,838,524...68,926,653
Ensembl chr 3:68,838,189...68,926,639 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15215180)		 Ensembl
RGD		 PMID:15215180 GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
negative regulation of N-terminal protein palmitoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhatl hedgehog acyltransferase-like involved_in IBA
ISO		 PMID:21873635
(MGI:3772109|PMID:18081866)		 RGD PMID:18081866 PMID:21873635 MGI:3772109, RGD:13792537 NCBI chr 8:121,447,001...121,454,070
Ensembl chr 8:121,447,002...121,454,001 		JBrowse link
negative regulation of protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbi diazepam binding inhibitor involved_in ISO (PMID:21079819) RGD PMID:21079819 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
positive regulation of lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pemt phosphatidylethanolamine N-methyltransferase IMP RGD PMID:12091487 RGD:1626402 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
positive regulation of protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta involved_in ISO UniProtKB:P37840 (PMID:26392287) RGD PMID:26392287 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25495476)		 GO_Central
RGD		 PMID:25495476 GO_REF:0000024 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25495476)
GO_REF:0000024		 Ensembl
RGD
GO_Central		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478 		JBrowse link
G Svip small VCP interacting protein involved_in ISO (PMID:21909394) RGD PMID:21909394 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116 		JBrowse link
regulation of lipoprotein lipid oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
regulation of protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg101 autophagy related 101 involved_in ISO (PMID:19225151)
(MGI:6810791|PMID:19225151)		 RGD PMID:19225151 MGI:6810791 NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633 		JBrowse link
G Atg13 autophagy related 13 involved_in ISO (PMID:19225151)
(MGI:6810791|PMID:19225151)		 RGD PMID:19225151 MGI:6810791 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (PMID:31406347) RGD PMID:31406347 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in ISO (PMID:19225151)
(MGI:6810791|PMID:19225151)		 RGD PMID:19225151 MGI:6810791 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:19225151)
(MGI:6810791|PMID:19225151)		 RGD PMID:19225151 MGI:6810791 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    regulation of biological process 13040
      regulation of metabolic process 6832
        regulation of cellular metabolic process 5467
          regulation of lipoprotein metabolic process 19
            negative regulation of lipoprotein metabolic process + 5
            positive regulation of lipoprotein metabolic process + 5
            regulation of lipoprotein oxidation + 2
            regulation of protein lipidation + 11
Path 2
Term Annotations click to browse term
  biological_process 19746
    biological regulation 13447
      regulation of biological process 13040
        regulation of metabolic process 6832
          regulation of macromolecule metabolic process 6316
            regulation of protein metabolic process 2642
              regulation of lipoprotein metabolic process 19
                negative regulation of lipoprotein metabolic process + 5
                positive regulation of lipoprotein metabolic process + 5
                regulation of lipoprotein oxidation + 2
                regulation of protein lipidation + 11
paths to the root