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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate proteoglycan biosynthetic process
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Accession:GO:0050651 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of dermatan sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are dermatan sulfate (chondroitin sulfate B). Dermatan sulfate is a glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.
Synonyms:exact_synonym: chondroitin sulfate B proteoglycan biosynthesis;   chondroitin sulfate B proteoglycan biosynthetic process;   dermatan sulfate proteoglycan anabolism;   dermatan sulfate proteoglycan biosynthesis;   dermatan sulfate proteoglycan formation;   dermatan sulfate proteoglycan synthesis;   dermatan sulphate proteoglycan biosynthesis;   dermatan sulphate proteoglycan biosynthetic process


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dermatan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in ISO (PMID:21763480), (PMID:25893793) RGD PMID:21763480 PMID:25893793 NCBI chr 1:225,120,061...225,126,579
Ensembl chr 1:225,120,061...225,126,579
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in ISO (PMID:11788602) RGD PMID:11788602 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 involved_in ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:110,734,105...110,736,162
Ensembl chr 3:110,734,105...110,736,162
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:27,703,738...27,784,982
Ensembl chr20:27,703,732...27,782,586
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20078
    metabolic process 12140
      primary metabolic process 10862
        protein metabolic process 6081
          glycoprotein metabolic process 364
            proteoglycan metabolic process 79
              proteoglycan biosynthetic process 54
                dermatan sulfate proteoglycan biosynthetic process 5
                  dermatan sulfate biosynthetic process 3
                  dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 20078
    metabolic process 12140
      organic substance metabolic process 11646
        macromolecule metabolic process 10055
          cellular macromolecule metabolic process 8496
            cellular macromolecule biosynthetic process 5129
              glycoprotein biosynthetic process 297
                proteoglycan biosynthetic process 54
                  dermatan sulfate proteoglycan biosynthetic process 5
                    dermatan sulfate biosynthetic process 3
                    dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 0
paths to the root