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ONTOLOGY REPORT - ANNOTATIONS

Term:stem cell development
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Accession:GO:0048864 term browser browse the term
Definition:The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate.

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stem cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 ISO (MGI:2667422|PMID:12843296) RGD PMID:12843296 MGI:2667422 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681 		JBrowse link
G Msi2 musashi RNA-binding protein 2 ISO (MGI:2450014|PMID:12407178) RGD PMID:12407178 MGI:2450014 NCBI chr10:75,673,840...76,040,106
Ensembl chr10:75,681,393...76,039,964 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C ISO (PMID:21911094) RGD PMID:21911094 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO MGI:4437211 (MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:4431136 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224 		JBrowse link
G Shh sonic hedgehog signaling molecule ISS
ISO		 GO_REF:0000024
(MGI:2667422|PMID:12843296)		 UniProt
RGD		 PMID:12843296 GO_REF:0000024 MGI:2667422 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:12843296) RGD PMID:12843296 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609 		JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:2667422|PMID:12843296) RGD PMID:12843296 MGI:2667422 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723 		JBrowse link
cardiac neural crest cell development involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:2179740 (MGI:2179743|PMID:11694877) RGD PMID:11694877 MGI:2179743 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO MGI:1346859 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO MGI:1346858 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975 		JBrowse link
cardiac neural crest cell development involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III ISO MGI:3589208 (MGI:4849577|PMID:21098571) RGD PMID:21098571 MGI:4849577 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO (MGI:4413411|PMID:19008477) RGD PMID:19008477 MGI:4413411 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO		 GO_REF:0000107
(MGI:4354447|PMID:19609448)		 Ensembl
RGD		 PMID:19609448 GO_REF:0000107 MGI:4354447 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO		 GO_REF:0000107
(MGI:4359139|PMID:19509466)		 Ensembl
RGD		 PMID:19509466 GO_REF:0000107 MGI:4359139 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:1857265 (MGI:3805126|PMID:18539270) RGD PMID:18539270 MGI:3805126 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214 		JBrowse link
cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 IEA
ISO		 GO_REF:0000107
MGI:2386570|MGI:3803647 (MGI:4453274|PMID:20144608)		 Ensembl
RGD		 PMID:20144608 GO_REF:0000107 MGI:4453274 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546 		JBrowse link
G Nrp1 neuropilin 1 NOT ISO (MGI:5693177|PMID:26053665) RGD PMID:26053665 MGI:5693177 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (MGI:2446944|PMID:12464179) RGD PMID:12464179 MGI:2446944 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:1857265 (MGI:3805126|PMID:18539270) RGD PMID:18539270 MGI:3805126 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214 		JBrowse link
neural crest cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:1096359|MGI:1857891|MGI:2679699 (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568) RGD PMID:16368932 PMID:17067568 MGI:3612223 MGI:3703483 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (MGI:4366654|PMID:19793887) RGD PMID:19793887 MGI:4366654 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512 		JBrowse link
G Cdh2 cadherin 2 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6216737|PMID:26750727)		 UniProt
Ensembl
RGD		 PMID:26750727 GO_REF:0000024 GO_REF:0000107 MGI:6216737 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684 		JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 ISO MGI:2679699 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:256,382,861...256,386,729
Ensembl chr 1:256,382,791...256,386,729 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 ISO MGI:1096359 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:256,369,410...256,380,649
Ensembl chr 1:256,370,850...256,378,335 		JBrowse link
G Edn1 endothelin 1 ISO MGI:1857637 (MGI:1277800|PMID:9671575), (MGI:3510064|PMID:15327783) RGD PMID:9671575 PMID:15327783 MGI:1277800 MGI:3510064 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324 		JBrowse link
G Ednra endothelin receptor type A IEA
ISO		 GO_REF:0000107
MGI:1857473 (MGI:1201717|PMID:9449664), (MGI:3056210|PMID:15306564), (MGI:3510064|PMID:15327783)		 Ensembl
RGD		 PMID:9449664 PMID:15306564 PMID:15327783 GO_REF:0000107 MGI:1201717 MGI:3056210 MGI:3510064 NCBI chr19:33,928,356...33,991,703
Ensembl chr19:33,928,356...33,991,703 		JBrowse link
G Fam172a family with sequence similarity 172, member A ISO (MGI:6113784|PMID:29311329) RGD PMID:29311329 MGI:6113784 NCBI chr 2:4,942,795...5,547,744
Ensembl chr 2:4,942,775...5,545,144 		JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1347481 (MGI:3701735|PMID:16839542) RGD PMID:16839542 MGI:3701735 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484 		JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1347466 (MGI:3701735|PMID:16839542) RGD PMID:16839542 MGI:3701735 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO MGI:1857639 (MGI:1277800|PMID:9671575) RGD PMID:9671575 MGI:1277800 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546 		JBrowse link
G Kbtbd8 kelch repeat and BTB domain containing 8 IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:26399832)		 Ensembl
UniProt
RGD		 PMID:26399832 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:127,164,728...127,177,537
Ensembl chr 4:127,164,453...127,177,477 		JBrowse link
G Klhl12 kelch-like family member 12 IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:27716508)		 Ensembl
UniProt
RGD		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:51,280,933...51,314,753
Ensembl chr13:51,282,684...51,314,797 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO MGI:1346859 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO MGI:1346858 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975 		JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 ISO
ISS		 (PMID:26399832)
GO_REF:0000024		 RGD
UniProt		 PMID:26399832 GO_REF:0000024 NCBI chr 1:265,829,055...265,839,819
Ensembl chr 1:265,829,108...265,839,818 		JBrowse link
G Pdcd6 programmed cell death 6 ISO
ISS		 (PMID:27716508)
GO_REF:0000024		 RGD
UniProt		 PMID:27716508 GO_REF:0000024 NCBI chr 1:31,576,183...31,591,852
Ensembl chr 1:31,576,183...31,591,849 		JBrowse link
G Pef1 penta-EF hand domain containing 1 ISO
ISS		 (PMID:27716508)
GO_REF:0000024		 RGD
UniProt		 PMID:27716508 GO_REF:0000024 NCBI chr 5:148,320,610...148,343,876
Ensembl chr 5:148,320,438...148,343,886 		JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030 		JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (PMID:12444107) RGD PMID:12444107 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797 		JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO		 GO_REF:0000024
(MGI:5285157|PMID:20596238)		 UniProt
RGD		 PMID:20596238 GO_REF:0000024 MGI:5285157 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983 		JBrowse link
G Sox8 SRY-box transcription factor 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336 		JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:3041881 (MGI:3613316|PMID:15691760) RGD PMID:15691760 MGI:3613316 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 ISO (PMID:26399832) RGD PMID:26399832 NCBI chr18:56,081,863...56,115,719
Ensembl chr18:56,082,195...56,115,593 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2176682 (MGI:80519|PMID:8622766) RGD PMID:8622766 MGI:80519 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 IEA
ISO		 GO_REF:0000107
MGI:2651395 (MGI:3045641|PMID:15226263)		 Ensembl
RGD		 PMID:15226263 GO_REF:0000107 MGI:3045641 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930 		JBrowse link
G Alx1 ALX homeobox 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458 		JBrowse link
G Anxa6 annexin A6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:40,320,581...40,375,605
Ensembl chr10:40,320,581...40,375,605 		JBrowse link
G Cfl1 cofilin 1 ISO MGI:3574399 (MGI:3530675|PMID:15649475) RGD PMID:15649475 MGI:3530675 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337 		JBrowse link
G Coro1c coronin 1C ISO
IBA		 (PMID:25074804)
PMID:21873635		 RGD PMID:25074804, PMID:21873635 RGD:13792537 NCBI chr12:48,481,741...48,554,054
Ensembl chr12:48,481,750...48,554,052 		JBrowse link
G Edn3 endothelin 3 ISO MGI:1856392 (MGI:1267304|PMID:9624616) RGD PMID:9624616 MGI:1267304 NCBI chr 3:172,856,730...172,879,276
Ensembl chr 3:172,856,733...172,880,450 		JBrowse link
G Ednrb endothelin receptor type B ISO (MGI:1349495|PMID:10591209) RGD PMID:10591209 MGI:1349495 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354 		JBrowse link
G Efnb1 ephrin B1 IEA
ISO		 GO_REF:0000107
MGI:3039290 (MGI:3037600|PMID:15037550)		 Ensembl
RGD		 PMID:15037550 GO_REF:0000107 MGI:3037600 NCBI chr  X:68,891,227...68,904,034
Ensembl chr  X:68,891,227...68,904,038 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:1352955|PMID:10655590)		 UniProt
Ensembl
RGD		 PMID:10655590 GO_REF:0000024 GO_REF:0000107 MGI:1352955 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644 		JBrowse link
G Fgf19 fibroblast growth factor 19 ISO MGI:3044957 (MGI:3575218|PMID:15789410) RGD PMID:15789410 MGI:3575218 NCBI chr 1:218,058,405...218,061,693
Ensembl chr 1:218,058,405...218,061,693 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO MGI:1857634 (MGI:3588904|PMID:15996652), (MGI:4358009|PMID:19700621), (MGI:5478665|PMID:23144817) RGD PMID:15996652 PMID:19700621 PMID:23144817 MGI:3588904 MGI:4358009 MGI:5478665 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817 		JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO
ISS
IEA		 (PMID:15242795)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:15242795 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO		 GO_REF:0000107
MGI:2179429 (MGI:3607736|PMID:14659802)		 Ensembl
RGD		 PMID:14659802 GO_REF:0000107 MGI:3607736 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B IEA
ISO
ISS		 GO_REF:0000107
(MGI:707955|PMID:9165122)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:9165122 GO_REF:0000024 GO_REF:0000107 MGI:707955 NCBI chr 9:93,112,781...93,130,135
Ensembl chr 9:93,112,805...93,125,014 		JBrowse link
G Isl1 ISL LIM homeobox 1 ISO MGI:108075 (MGI:3640718|PMID:16687132) RGD PMID:16687132 MGI:3640718 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436 		JBrowse link
G Kitlg KIT ligand ISO (MGI:1934508|PMID:11401406) RGD PMID:11401406 MGI:1934508 NCBI chr 7:42,269,784...42,351,054
Ensembl chr 7:42,269,784...42,351,054 		JBrowse link
G Lama5 laminin subunit alpha 5 ISO MGI:1934917 (MGI:3611396|PMID:16316641) RGD PMID:16316641 MGI:3611396 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127 		JBrowse link
G Nrp2 neuropilin 2 ISO MGI:2137037 (MGI:3613099|PMID:16319111) RGD PMID:16319111 MGI:3613099 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087 		JBrowse link
G Nrtn neurturin ISO (PMID:15242795) RGD PMID:15242795 NCBI chr 9:10,299,881...10,306,599
Ensembl chr 9:10,305,470...10,306,597 		JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO MGI:3522498 (MGI:3618450|PMID:16423343) RGD PMID:16423343 MGI:3618450 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063 		JBrowse link
G Pax3 paired box 3 ISO MGI:3043030 (MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:3056222 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172 		JBrowse link
G Pax6 paired box 6 IMP RGD PMID:9079035 RGD:8552342 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Phactr4 phosphatase and actin regulator 4 ISO
IBA		 (MGI:5302129|PMID:22215812)
PMID:21873635		 RGD PMID:22215812, PMID:21873635 MGI:5302129, RGD:13792537 NCBI chr 5:150,533,895...150,609,423
Ensembl chr 5:150,546,430...150,609,352 		JBrowse link
G Ret ret proto-oncogene ISO MGI:2449909 (MGI:3617928|PMID:15242795) RGD PMID:15242795 MGI:3617928 NCBI chr 4:150,202,170...150,249,196
Ensembl chr 4:150,202,058...150,244,372 		JBrowse link
G Sema3a semaphorin 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
G Sema3b semaphorin 3B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,353,791...116,362,655
Ensembl chr 8:116,354,073...116,361,343 		JBrowse link
G Sema3c semaphorin 3C ISO
IBA		 MGI:2150759 (MGI:2149435|PMID:11688556)
PMID:21873635		 RGD PMID:11688556, PMID:21873635 MGI:2149435, RGD:13792537 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446 		JBrowse link
G Sema3d semaphorin 3D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:19,224,378...19,413,519
Ensembl chr 4:19,224,310...19,413,484 		JBrowse link
G Sema3e semaphorin 3E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:17,314,745...17,594,659
Ensembl chr 4:17,272,511...17,594,598 		JBrowse link
G Sema3f semaphorin 3F ISO
IBA		 MGI:2670663 (MGI:3613099|PMID:16319111)
PMID:21873635		 RGD PMID:16319111, PMID:21873635 MGI:3613099, RGD:13792537 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915 		JBrowse link
G Sema3g semaphorin 3G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:7,303,582...7,315,214
Ensembl chr16:7,303,578...7,315,390 		JBrowse link
G Sema4a semaphorin 4A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997 		JBrowse link
G Sema4b semaphorin 4B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:141,986,145...142,014,400
Ensembl chr 1:141,986,145...142,014,398 		JBrowse link
G Sema4c semaphorin 4C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870 		JBrowse link
G Sema4d semaphorin 4D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974 		JBrowse link
G Sema4f ssemaphorin 4F IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,738,225...113,764,532
Ensembl chr 4:113,738,226...113,764,532 		JBrowse link
G Sema4g semaphorin 4G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,738,935...264,753,399
Ensembl chr 1:264,741,911...264,753,397 		JBrowse link
G Sema5a semaphorin 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970 		JBrowse link
G Sema5b semaphorin 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:68,304,844...68,435,109
Ensembl chr11:68,306,659...68,349,238 		JBrowse link
G Sema6a semaphorin 6A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:41,330,519...41,451,813
Ensembl chr18:41,333,551...41,389,510 		JBrowse link
G Sema6b semaphorin 6B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,934,273...10,951,252
Ensembl chr 9:10,941,613...10,951,252 		JBrowse link
G Sema6c semaphorin 6C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:196,330,777...196,347,218
Ensembl chr 2:196,334,626...196,344,008 		JBrowse link
G Sema6d semaphorin 6D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:116,899,906...116,958,059
Ensembl chr 3:116,899,878...116,958,050 		JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:62,723,788...62,746,530
Ensembl chr 8:62,723,788...62,745,868 		JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
ISS		 GO_REF:0000107
MGI:1857796 (MGI:3583396|PMID:15936751)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:15936751 GO_REF:0000024 GO_REF:0000107 MGI:3583396 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISO		 GO_REF:0000107
MGI:101791 (MGI:3640718|PMID:16687132)		 Ensembl
RGD		 PMID:16687132 GO_REF:0000107 MGI:3640718 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770 		JBrowse link
G Sox10 SRY-box transcription factor 10 ISO
IBA		 (MGI:3527299|PMID:15572147)
PMID:21873635		 RGD PMID:15572147, PMID:21873635 MGI:3527299, RGD:13792537 NCBI chr 7:120,393,238...120,403,523
Ensembl chr 7:120,393,254...120,403,523 		JBrowse link
G Sox8 SRY-box transcription factor 8 ISS
ISO		 GO_REF:0000024
(MGI:3527299|PMID:15572147)		 UniProt
RGD		 PMID:15572147 GO_REF:0000024 MGI:3527299 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336 		JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO		 GO_REF:0000024
MGI:2179190|MGI:2179191 (MGI:3530686|PMID:15652707), (MGI:4822099|PMID:20501333)		 UniProt
RGD		 PMID:15652707 PMID:20501333 GO_REF:0000024 MGI:3530686 MGI:4822099 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO MGI:2387501 (MGI:2450818|PMID:12522767) RGD PMID:12522767 MGI:2450818 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865 		JBrowse link
neural crest cell migration involved in autonomic nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn1 fibronectin 1 ISO
IEA		 (PMID:26571399)
GO_REF:0000107		 RGD
Ensembl		 PMID:26571399 GO_REF:0000107 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078 		JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662), (MGI:5567908|PMID:19325129) RGD PMID:18356247 PMID:19325129 PMID:19386662 MGI:3788968 MGI:3848580 MGI:5567908 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662) RGD PMID:18356247 PMID:19386662 MGI:3788968 MGI:3848580 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087 		JBrowse link
G Phox2b paired-like homeobox 2b ISO (MGI:1337891|PMID:10360575) RGD PMID:10360575 MGI:1337891 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010 		JBrowse link
G Sema3a semaphorin 3A ISO (MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662), (MGI:5567908|PMID:19325129) RGD PMID:18356247 PMID:19325129 PMID:19386662 MGI:3788968 MGI:3848580 MGI:5567908 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
G Sema3f semaphorin 3F ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915 		JBrowse link
neural crest cell migration involved in heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592 		JBrowse link
neural crest cell migration involved in sympathetic nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema3a semaphorin 3A ISO (MGI:5567908|PMID:19325129) RGD PMID:19325129 MGI:5567908 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO		 GO_REF:0000107
UniProtKB:P23359 (MGI:5502250|PMID:23863481)		 Ensembl
RGD		 PMID:23863481 GO_REF:0000107 MGI:5502250 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO UniProtKB:P21275 (MGI:5502250|PMID:23863481) RGD PMID:23863481 MGI:5502250 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399 		JBrowse link
G Sema3c semaphorin 3C ISO (MGI:5693177|PMID:26053665) RGD PMID:26053665 MGI:5693177 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446 		JBrowse link
regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin NOT ISO (MGI:3721185|PMID:17628518) RGD PMID:17628518 MGI:3721185 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485 		JBrowse link
ventral trunk neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087 		JBrowse link
G Sema3a semaphorin 3A ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
G Sema3f semaphorin 3F ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    cellular process 18858
      cellular developmental process 4463
        cell development 2446
          stem cell development 93
            neural crest cell development + 87
Path 2
Term Annotations click to browse term
  biological_process 20044
    cellular process 18858
      cellular developmental process 4463
        cell differentiation 4369
          stem cell differentiation 235
            stem cell development 93
              neural crest cell development + 87
paths to the root