ONTOLOGY REPORT - ANNOTATIONS
Term: stem cell development
Accession: GO:0048864
browse the term
Definition: The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate.
G
Alx1
ALX homeobox 1
acts_upstream_of_or_within
ISO
MGI:1857553 (MGI:81193|PMID:8673125)
RGD
PMID:8673125
MGI:81193
NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
G
Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:2156165 (MGI:81253|PMID:8623928)
RGD
PMID:8623928
MGI:81253
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Fgf2
fibroblast growth factor 2
involved_in
ISO
(MGI:2667422|PMID:12843296)
RGD
PMID:12843296
MGI:2667422
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Mir3545
microRNA 3545
acts_upstream_of_or_within
ISO
(MGI:4946569|PMID:21307095)
RGD
PMID:21307095
MGI:4946569
NCBI chr 6:131,199,542...131,199,656
Ensembl chr 6:131,199,542...131,199,656
G
Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
(MGI:4946569|PMID:21307095)
RGD
PMID:21307095
MGI:4946569
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
G
Msi2
musashi RNA-binding protein 2
involved_in
ISO
(MGI:2450014|PMID:12407178)
RGD
PMID:12407178
MGI:2450014
NCBI chr10:73,143,760...73,510,566
Ensembl chr10:73,147,380...73,510,157
G
Ptprc
protein tyrosine phosphatase, receptor type, C
involved_in
ISO
(PMID:21911094)
RGD
PMID:21911094
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
G
Setd2
SET domain containing 2, histone lysine methyltransferase
acts_upstream_of_or_within
ISO
MGI:4437211 (MGI:4431136|PMID:20133625)
RGD
PMID:20133625
MGI:4431136
NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS ISO
GO_REF:0000024 (MGI:2667422|PMID:12843296)
UniProt RGD
PMID:12843296
GO_REF:0000024 MGI:2667422
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Wnt7a
Wnt family member 7A
involved_in
ISO
(PMID:12843296)
RGD
PMID:12843296
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
G
Wnt7b
Wnt family member 7B
involved_in
ISO
(MGI:2667422|PMID:12843296)
RGD
PMID:12843296
MGI:2667422
NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2179740 (MGI:2179743|PMID:11694877)
RGD
PMID:11694877
MGI:2179743
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
G
Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO
MGI:1346859 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589208 (MGI:4849577|PMID:21098571)
RGD
PMID:21098571
MGI:4849577
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
ISO
(MGI:4413411|PMID:19008477)
RGD
PMID:19008477
MGI:4413411
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:4354447|PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107 MGI:4354447
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:4359139|PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107 MGI:4359139
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (MGI:3805126|PMID:18539270)
RGD
PMID:18539270
MGI:3805126
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Cdc42
cell division cycle 42
involved_in
ISO
(MGI:6362316|PMID:31219639)
RGD
PMID:31219639
MGI:6362316
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
G
Edn1
endothelin 1
involved_in
ISO
(MGI:6362316|PMID:31219639)
RGD
PMID:31219639
MGI:6362316
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:1857473|MGI:2687362 (MGI:6362316|PMID:31219639)
RGD
PMID:31219639
MGI:6362316
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Folr1
folate receptor alpha
involved_in
ISO
(MGI:3721767|PMID:17286298)
RGD
PMID:17286298
MGI:3721767
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
G
Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386570|MGI:3803647 (MGI:4453274|PMID:20144608)
Ensembl RGD
PMID:20144608
GO_REF:0000107 MGI:4453274
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
G
Nrp1
neuropilin 1
NOT|involved_in
ISO
(MGI:5693177|PMID:26053665)
RGD
PMID:26053665
MGI:5693177
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pitx2
paired-like homeodomain 2
involved_in
ISO
(MGI:2446944|PMID:12464179)
RGD
PMID:12464179
MGI:2446944
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (MGI:3805126|PMID:18539270)
RGD
PMID:18539270
MGI:3805126
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
MGI:1096359|MGI:1857891|MGI:2679699 (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568)
RGD
PMID:16368932 PMID:17067568
MGI:3612223 MGI:3703483
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
(MGI:4366654|PMID:19793887)
RGD
PMID:19793887
MGI:4366654
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Cdh2
cadherin 2
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6216737|PMID:26750727) GO_REF:0000024
Ensembl RGD UniProt
PMID:26750727
GO_REF:0000024 GO_REF:0000107 MGI:6216737
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
G
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:2679699 (MGI:3703483|PMID:17067568)
RGD
PMID:17067568
MGI:3703483
NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
G
Cyp26c1
cytochrome P450, family 26, subfamily C, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:1096359 (MGI:3703483|PMID:17067568)
RGD
PMID:17067568
MGI:3703483
NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
G
Edn1
endothelin 1
acts_upstream_of_or_within
ISO
MGI:1857637 (MGI:1277800|PMID:9671575), (MGI:3510064|PMID:15327783)
RGD
PMID:9671575 PMID:15327783
MGI:1277800 MGI:3510064
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
acts_upstream_of_or_within
ISO
MGI:1857473 (MGI:1201717|PMID:9449664), (MGI:3056210|PMID:15306564), (MGI:3510064|PMID:15327783)
RGD
PMID:9449664 PMID:15306564 PMID:15327783
MGI:1201717 MGI:3056210 MGI:3510064
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Fam172a
family with sequence similarity 172, member A
involved_in
ISO
(MGI:6113784|PMID:29311329)
RGD
PMID:29311329
MGI:6113784
NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1347481 (MGI:3701735|PMID:16839542)
RGD
PMID:16839542
MGI:3701735
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (MGI:3701735|PMID:16839542)
RGD
PMID:16839542
MGI:3701735
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO
MGI:1857639 (MGI:1277800|PMID:9671575)
RGD
PMID:9671575
MGI:1277800
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
G
Kbtbd8
kelch repeat and BTB domain containing 8
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26399832) GO_REF:0000107
UniProt RGD Ensembl
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:127,675,967...127,688,785
Ensembl chr 4:127,676,141...127,687,697
G
Klhl12
kelch-like family member 12
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27716508)
UniProt Ensembl RGD
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
G
Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO
MGI:1346859 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:26399832)
UniProt RGD
PMID:26399832
GO_REF:0000024
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
G
Pdcd6
programmed cell death 6
involved_in
ISO ISS
(PMID:27716508) GO_REF:0000024
RGD UniProt
PMID:27716508
GO_REF:0000024
NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
G
Pef1
penta-EF hand domain containing 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27716508)
UniProt RGD
PMID:27716508
GO_REF:0000024
NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
G
Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(MGI:3709664|PMID:17473173)
RGD
PMID:17473173
MGI:3709664
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
G
Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:12444107)
RGD
PMID:12444107
NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
G
Sox8
SRY-box transcription factor 8
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:3041881 (MGI:3613316|PMID:15691760)
RGD
PMID:15691760
MGI:3613316
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tcof1
treacle ribosome biogenesis factor 1
involved_in
ISO
(PMID:26399832)
RGD
PMID:26399832
NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324
G
Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:2176682 (MGI:80519|PMID:8622766)
RGD
PMID:8622766
MGI:80519
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Acvr1
activin A receptor type 1
acts_upstream_of_or_within
ISO
MGI:2651395 (MGI:3045641|PMID:15226263)
RGD
PMID:15226263
MGI:3045641
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Anxa6
annexin A6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:39,101,395...39,156,483
Ensembl chr10:39,097,109...39,156,433
G
Cfl1
cofilin 1
acts_upstream_of_or_within
ISO
MGI:3574399 (MGI:3530675|PMID:15649475)
RGD
PMID:15649475
MGI:3530675
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Coro1c
coronin 1C
involved_in
IBA ISO
PMID:21873635 (PMID:25074804)
RGD
PMID:25074804 PMID:21873635
RGD:13792537
NCBI chr12:42,712,960...42,785,179
Ensembl chr12:42,712,991...42,785,179
G
Edn3
endothelin 3
acts_upstream_of_or_within
ISO
MGI:1856392 (MGI:1267304|PMID:9624616)
RGD
PMID:9624616
MGI:1267304
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
G
Ednrb
endothelin receptor type B
acts_upstream_of_or_within
ISO
(MGI:1349495|PMID:10591209)
RGD
PMID:10591209
MGI:1349495
NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
G
Efnb1
ephrin B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3039290 (MGI:3037600|PMID:15037550)
Ensembl RGD
PMID:15037550
GO_REF:0000107 MGI:3037600
NCBI chr X:64,257,351...64,270,158
Ensembl chr X:64,257,351...64,270,157
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:1352955|PMID:10655590)
UniProt RGD
PMID:10655590
GO_REF:0000024 MGI:1352955
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Fgf19
fibroblast growth factor 19
acts_upstream_of_or_within
ISO
MGI:3044957 (MGI:3575218|PMID:15789410)
RGD
PMID:15789410
MGI:3575218
NCBI chr 1:200,056,656...200,059,944
Ensembl chr 1:200,056,644...200,060,287
G
Gbx2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
MGI:1857634 (MGI:3588904|PMID:15996652), (MGI:4358009|PMID:19700621), (MGI:5478665|PMID:23144817)
RGD
PMID:15996652 PMID:19700621 PMID:23144817
MGI:3588904 MGI:4358009 MGI:5478665
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
G
Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15242795)
UniProt Ensembl RGD
PMID:15242795
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179429 (MGI:3607736|PMID:14659802)
Ensembl RGD
PMID:14659802
GO_REF:0000107 MGI:3607736
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:707955|PMID:9165122) GO_REF:0000024
Ensembl RGD UniProt
PMID:9165122
GO_REF:0000024 GO_REF:0000107 MGI:707955
NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:108075 (MGI:3640718|PMID:16687132)
RGD
PMID:16687132
MGI:3640718
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
(MGI:1934508|PMID:11401406)
RGD
PMID:11401406
MGI:1934508
NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
G
Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (MGI:3611396|PMID:16316641)
RGD
PMID:16316641
MGI:3611396
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Nrp1
neuropilin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrtn
neurturin
acts_upstream_of_or_within
ISO
(PMID:15242795)
RGD
PMID:15242795
NCBI chr 9:1,581,860...1,587,835
Ensembl chr 9:1,581,975...1,583,102
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3522498 (MGI:3618450|PMID:16423343)
RGD
PMID:16423343
MGI:3618450
NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
G
Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:3043030 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
G
Pax6
paired box 6
IMP
RGD
PMID:9079035
RGD:8552342
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Phactr4
phosphatase and actin regulator 4
involved_in
IBA ISO
PMID:21873635 (MGI:5302129|PMID:22215812)
RGD
PMID:22215812 PMID:21873635
MGI:5302129 , RGD:13792537
NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865
G
Radil
Rap associating with DIL domain
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:12,024,395...12,088,540
Ensembl chr12:12,024,395...12,088,540
G
Ret
ret proto-oncogene
acts_upstream_of_or_within
ISO
MGI:2449909 (MGI:3617928|PMID:15242795)
RGD
PMID:15242795
MGI:3617928
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
G
Sema3a
semaphorin 3A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3b
semaphorin 3B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
G
Sema3c
semaphorin 3C
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2150759 (MGI:2149435|PMID:11688556) PMID:21873635
RGD
PMID:11688556 PMID:21873635
MGI:2149435 , RGD:13792537
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Sema3d
semaphorin 3D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
G
Sema3e
semaphorin 3E
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Sema3f
semaphorin 3F
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Sema3g
semaphorin 3G
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4a
semaphorin 4A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
G
Sema4b
semaphorin 4B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
G
Sema4c
semaphorin 4C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
G
Sema4d
semaphorin 4D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Sema4f
ssemaphorin 4F
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema4g
semaphorin 4G
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
G
Sema5a
semaphorin 5A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Sema5b
semaphorin 5B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:65,102,031...65,225,456
Ensembl chr11:65,102,031...65,225,311
G
Sema6a
semaphorin 6A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sema6b
semaphorin 6B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
G
Sema6c
semaphorin 6C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857796 (MGI:3583396|PMID:15936751)
UniProt RGD
PMID:15936751
GO_REF:0000024 MGI:3583396
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101791 (MGI:3640718|PMID:16687132)
Ensembl RGD
PMID:16687132
GO_REF:0000107 MGI:3640718
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
G
Sox10
SRY-box transcription factor 10
involved_in
IBA ISO
PMID:21873635 (MGI:3527299|PMID:15572147)
RGD
PMID:15572147 PMID:21873635
MGI:3527299 , RGD:13792537
NCBI chr 7:110,725,274...110,735,544
Ensembl chr 7:110,725,274...110,735,544
G
Sox8
SRY-box transcription factor 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:3527299|PMID:15572147)
UniProt RGD
PMID:15572147
GO_REF:0000024 MGI:3527299
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190|MGI:2179191 (MGI:3530686|PMID:15652707), (MGI:4822099|PMID:20501333)
UniProt RGD
PMID:15652707 PMID:20501333
GO_REF:0000024 MGI:3530686 MGI:4822099
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387501 (MGI:2450818|PMID:12522767)
RGD
PMID:12522767
MGI:2450818
NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
G
Fn1
fibronectin 1
involved_in
ISO IEA
(PMID:26571399) GO_REF:0000107
RGD Ensembl
PMID:26571399
GO_REF:0000107
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662), (MGI:5567908|PMID:19325129)
RGD
PMID:18356247 PMID:19325129 PMID:19386662
MGI:3788968 MGI:3848580 MGI:5567908
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
ISO
(MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662)
RGD
PMID:18356247 PMID:19386662
MGI:3788968 MGI:3848580
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Phox2b
paired-like homeobox 2b
involved_in
ISO
(MGI:1337891|PMID:10360575)
RGD
PMID:10360575
MGI:1337891
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662), (MGI:5567908|PMID:19325129)
RGD
PMID:18356247 PMID:19325129 PMID:19386662
MGI:3788968 MGI:3848580 MGI:5567908
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Folr1
folate receptor alpha
involved_in
ISO
(MGI:3721767|PMID:17286298)
RGD
PMID:17286298
MGI:3721767
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:5567908|PMID:19325129)
RGD
PMID:19325129
MGI:5567908
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (MGI:5502250|PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107 MGI:5502250
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Sema3c
semaphorin 3C
involved_in
ISO
(MGI:5693177|PMID:26053665)
RGD
PMID:26053665
MGI:5693177
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Eng
endoglin
NOT|involved_in
ISO
(MGI:3721185|PMID:17628518)
RGD
PMID:17628518
MGI:3721185
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (MGI:3611396|PMID:16316641)
RGD
PMID:16316641
MGI:3611396
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Nrp2
neuropilin 2
acts_upstream_of_or_within
ISO
MGI:2137037 (MGI:3613099|PMID:16319111)
RGD
PMID:16319111
MGI:3613099
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Sema3f
semaphorin 3F
acts_upstream_of_or_within
ISO
MGI:2670663 (MGI:3613099|PMID:16319111)
RGD
PMID:16319111
MGI:3613099
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of involved_in
ISO IEA
(MGI:3053236|PMID:15337776) GO_REF:0000107
RGD Ensembl
PMID:15337776
GO_REF:0000107 MGI:3053236
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all