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ONTOLOGY REPORT - ANNOTATIONS

Term:stem cell differentiation
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Accession:GO:0048863 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
Synonyms:xref: Wikipedia:Stem_cell_differentiation
 never_in_taxon: NCBITaxon:4751 ! Fungi


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stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2M alpha-2-macroglobulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19796622) Ensembl
MGI		 PMID:19796622 GO_REF:0000107 NCBI chr12:9,067,708...9,116,229
Ensembl chr12:9,067,664...9,116,229 		JBrowse link
G BBS12 Bardet-Biedl syndrome 12 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22958920) Ensembl
MGI		 PMID:22958920 GO_REF:0000107 NCBI chr 4:122,700,442...122,744,939
Ensembl chr 4:122,732,702...122,744,942 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in ISO
IEA		 dental pulp stem cells RGD
Ensembl		 PMID:19840645 GO_REF:0000107 RGD:2316145 NCBI chr 1:156,242,184...156,243,317
Ensembl chr 1:156,242,184...156,243,317 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20404091) Ensembl
MGI		 PMID:20404091 GO_REF:0000107 NCBI chr13:27,960,918...27,969,315
Ensembl chr13:27,960,918...27,969,315 		JBrowse link
G DMRTA2 DMRT like family A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21576465) Ensembl
MGI		 PMID:21576465 GO_REF:0000107 NCBI chr 1:50,417,550...50,423,443
Ensembl chr 1:50,417,550...50,423,443 		JBrowse link
G DNMT3L DNA methyltransferase 3 like involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr21:44,246,339...44,261,897
Ensembl chr21:44,246,339...44,262,216 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:43,772,620...43,776,966
Ensembl chr15:43,772,605...43,777,315 		JBrowse link
G EPCAM epithelial cell adhesion molecule involved_in IMP (PMID:19785009) UniProt PMID:19785009 NCBI chr 2:47,369,311...47,387,020
Ensembl chr 2:47,345,158...47,387,601 		JBrowse link
G EPOP elongin BC and polycomb repressive complex 2 associated protein involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:38,671,703...38,674,957
Ensembl chr17:38,671,703...38,674,957 		JBrowse link
G ESR1 estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619 		JBrowse link
G ETV4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO (PMID:18977342) MGI PMID:18977342 NCBI chr17:43,527,846...43,546,340
Ensembl chr17:43,527,844...43,579,620 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19303854) Ensembl
MGI		 PMID:19303854 GO_REF:0000107 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15781473) Ensembl
MGI		 PMID:15781473 GO_REF:0000107 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16442091) Ensembl
MGI		 PMID:16442091 GO_REF:0000107 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16442091) MGI PMID:16442091 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
G FOXO4 forkhead box O4 involved_in IMP (PMID:22972301) UniProt PMID:22972301 NCBI chr  X:71,095,851...71,103,532
Ensembl chr  X:71,095,851...71,103,532 		JBrowse link
G GAK cyclin G associated kinase acts_upstream_of_or_within ISO (PMID:18434600) MGI PMID:18434600 NCBI chr 4:849,277...932,316
Ensembl chr 4:849,276...932,373 		JBrowse link
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18400219) Ensembl
MGI		 PMID:18400219 GO_REF:0000107 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528 		JBrowse link
G GPM6A glycoprotein M6A involved_in IDA (PMID:19298174) UniProt PMID:19298174 NCBI chr 4:175,632,937...176,002,691
Ensembl chr 4:175,632,934...176,002,664 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta acts_upstream_of ISO (PMID:22064483) MGI PMID:22064483 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31761678) Ensembl
MGI		 PMID:31761678 GO_REF:0000107 NCBI chr 3:57,197,838...57,227,615
Ensembl chr 3:57,197,838...57,227,606 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEP (PMID:17078040) UniProt PMID:17078040 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291 		JBrowse link
G HOXA7 homeobox A7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19796622) Ensembl
MGI		 PMID:19796622 GO_REF:0000107 NCBI chr 7:27,153,716...27,156,675
Ensembl chr 7:27,153,716...27,157,936 		JBrowse link
G HOXD4 homeobox D4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19796622) Ensembl
MGI		 PMID:19796622 GO_REF:0000107 NCBI chr 2:176,151,550...176,153,226
Ensembl chr 2:176,151,550...176,153,226 		JBrowse link
G IFT80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:30683845) MGI PMID:30683845 NCBI chr 3:160,256,986...160,399,225
Ensembl chr 3:160,256,986...160,399,880 		JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9000074) Ensembl
MGI		 PMID:9000074 GO_REF:0000107 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730 		JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:15,246,069...15,522,042
Ensembl chr 6:15,246,069...15,522,042 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,267...54,740,783 		JBrowse link
G KRT10 keratin 10 acts_upstream_of_or_within ISO (PMID:19303854) MGI PMID:19303854 NCBI chr17:40,818,117...40,822,614
Ensembl chr17:40,818,117...40,822,614 		JBrowse link
G KRT14 keratin 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19303854) Ensembl
MGI		 PMID:19303854 GO_REF:0000107 NCBI chr17:41,582,279...41,586,895
Ensembl chr17:41,582,279...41,586,895 		JBrowse link
G L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO (PMID:22770845) MGI PMID:22770845 NCBI chr22:41,205,312...41,231,271
Ensembl chr22:41,205,282...41,231,271 		JBrowse link
G LIF LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chr22:30,240,453...30,246,759
Ensembl chr22:30,240,453...30,246,759 		JBrowse link
G LIN28A lin-28 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,410,817...26,429,728
Ensembl chr 1:26,410,817...26,429,728 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644814) Ensembl
MGI		 PMID:17644814 GO_REF:0000107 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G MEN1 menin 1 acts_upstream_of ISO (PMID:17927973) MGI PMID:17927973 NCBI chr11:64,803,516...64,811,294
Ensembl chr11:64,803,510...64,811,294 		JBrowse link
G METTL5 methyltransferase 5, N6-adenosine involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:169,811,757...169,824,905
Ensembl chr 2:169,810,081...169,824,931 		JBrowse link
G MIR125A microRNA 125a acts_upstream_of ISO (PMID:22751012) MGI PMID:22751012 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17693062) Ensembl
MGI		 PMID:17693062 GO_REF:0000107 NCBI chr 4:4,859,665...4,863,936
Ensembl chr 4:4,859,665...4,863,936 		JBrowse link
G MSX2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17693062) Ensembl
MGI		 PMID:17693062 GO_REF:0000107 NCBI chr 5:174,724,582...174,730,896
Ensembl chr 5:174,724,582...174,730,896 		JBrowse link
G MTF2 metal response element binding transcription factor 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:93,079,283...93,139,076
Ensembl chr 1:93,079,235...93,139,079 		JBrowse link
G NANOG Nanog homeobox acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:17940068)
(PMID:16894029)
(PMID:20123909)		 RGD
MGI		 PMID:16894029 PMID:17940068 PMID:20123909 PMID:22211239 RGD:9589812 NCBI chr12:7,789,402...7,799,146
Ensembl chr12:7,787,794...7,799,146 		JBrowse link
G NELFB negative elongation factor complex member B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:137,255,327...137,273,542
Ensembl chr 9:137,255,327...137,273,542 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18028901) Ensembl
MGI		 PMID:18028901 GO_REF:0000107 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:19,344,874...19,358,623
Ensembl chr 2:19,351,485...19,358,623 		JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944 		JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:18253862 PMID:19382247 GO_REF:0000107 RGD:2311162 RGD:2311168 NCBI chr13:27,920,000...27,926,313
Ensembl chr13:27,920,000...27,926,313 		JBrowse link
G PHF19 PHD finger protein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:120,855,651...120,904,128
Ensembl chr 9:120,855,651...120,894,896 		JBrowse link
G PHF5A PHD finger protein 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:41,459,717...41,468,692
Ensembl chr22:41,459,717...41,468,692 		JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5476873|PMID:23376973), (MGI:6148490|PMID:29153991)
(PMID:20123909)		 UniProt
MGI		 PMID:20123909 PMID:23376973 PMID:29153991 MGI:5476873 MGI:6148490 NCBI chr 6:31,164,337...31,170,682
Ensembl chr 6:31,164,337...31,180,731 		JBrowse link
G PRKCA protein kinase C alpha acts_upstream_of_or_within ISO (PMID:17644814) MGI PMID:17644814 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743 		JBrowse link
G PSMD11 proteasome 26S subunit, non-ATPase 11 involved_in IMP (PMID:22972301) UniProt PMID:22972301 NCBI chr17:32,444,510...32,483,319
Ensembl chr17:32,444,379...32,483,319 		JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17693062) Ensembl
MGI		 PMID:17693062 GO_REF:0000107 NCBI chr 6:45,328,330...45,551,082
Ensembl chr 6:45,328,157...45,664,349 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113 		JBrowse link
G SETD6 SET domain containing 6, protein lysine methyltransferase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:58,515,479...58,523,842
Ensembl chr16:58,515,479...58,523,842 		JBrowse link
G SHC4 SHC adaptor protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22948967) Ensembl
MGI		 PMID:22948967 GO_REF:0000107 NCBI chr15:48,823,741...48,963,919
Ensembl chr15:48,823,741...48,963,919 		JBrowse link
G SLC9A1 solute carrier family 9 member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19011045) Ensembl
MGI		 PMID:19011045 GO_REF:0000107 NCBI chr 1:27,098,809...27,155,125
Ensembl chr 1:27,098,809...27,166,981 		JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12691661 GO_REF:0000107 RGD:1600051 NCBI chr22:37,972,312...37,984,555
Ensembl chr22:37,970,686...37,987,422 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20123909) Ensembl
MGI		 PMID:20123909 GO_REF:0000107 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:20123909) MGI PMID:20123909 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436 		JBrowse link
G SOX21 SRY-box transcription factor 21 involved_in IDA (PMID:20876214) UniProt PMID:20876214 NCBI chr13:94,709,622...94,712,545
Ensembl chr13:94,709,622...94,712,545 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:18353863) MGI PMID:18353863 NCBI chr 6:84,732,496...84,764,598
Ensembl chr 6:84,687,351...84,764,598 		JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:16894029) MGI PMID:16894029 NCBI chr 2:85,133,392...85,310,387
Ensembl chr 2:85,133,392...85,310,387 		JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:20404091) MGI PMID:20404091 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15371309) Ensembl
MGI		 PMID:15371309 GO_REF:0000107 NCBI chr 3:189,596,746...189,897,276
Ensembl chr 3:189,631,389...189,897,276 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12142027) Ensembl
MGI		 PMID:12142027 GO_REF:0000107 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
G VSIR V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:20042595)
(PMID:22751012)		 MGI PMID:20042595 PMID:22751012 NCBI chr10:71,747,556...71,773,520
Ensembl chr10:71,747,556...71,773,520 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:137,566,127...137,577,691
Ensembl chr  X:137,566,127...137,577,691 		JBrowse link
G ZNF281 zinc finger protein 281 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,404,951...200,410,036
Ensembl chr 1:200,404,940...200,410,056 		JBrowse link
canonical Wnt signaling pathway involved in mesenchymal stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G FZD1 frizzled class receptor 1 involved_in IMP (PMID:20039315) BHF-UCL PMID:20039315 NCBI chr 7:91,264,433...91,271,326
Ensembl chr 7:91,264,433...91,271,326 		JBrowse link
G WNT3 Wnt family member 3 involved_in IMP (PMID:20039315) BHF-UCL PMID:20039315 NCBI chr17:46,762,506...46,818,692
Ensembl chr17:46,762,506...46,833,154 		JBrowse link
cardiac muscle cell myoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106 		JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19620969) Ensembl
MGI		 PMID:19620969 GO_REF:0000107 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9004034) Ensembl
MGI		 PMID:9004034 GO_REF:0000107 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792 		JBrowse link
G MYOCD myocardin involved_in IDA (PMID:15907818) BHF-UCL PMID:15907818 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949 		JBrowse link
G NOTCH1 notch receptor 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048 		JBrowse link
G NRG1 neuregulin 1 involved_in IDA (PMID:17336907) BHF-UCL PMID:17336907 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666 		JBrowse link
G RBM10 RNA binding motif protein 10 ISO RGD PMID:24178303 RGD:151667450 NCBI chr  X:47,145,221...47,186,813
Ensembl chr  X:47,145,221...47,186,813 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131 		JBrowse link
G REST RE1 silencing transcription factor involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808 		JBrowse link
G SRF serum response factor involved_in IGI
IEA		 (PMID:19783823) BHF-UCL
Ensembl		 PMID:19783823 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466 		JBrowse link
G TBXT T-box transcription factor T involved_in IDA
IEA		 (PMID:21632880) BHF-UCL
Ensembl		 PMID:21632880 GO_REF:0000107 NCBI chr 6:166,157,656...166,168,655
Ensembl chr 6:166,157,656...166,168,700 		JBrowse link
cardiac neural crest cell development involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11694877) Ensembl
MGI		 PMID:11694877 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr16:30,114,105...30,123,220
Ensembl chr16:30,114,105...30,123,506 		JBrowse link
cardiac neural crest cell development involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21098571) MGI PMID:21098571 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:173,526,091...173,530,229
Ensembl chr 4:173,524,969...173,530,229 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19609448) Ensembl
MGI		 PMID:19609448 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999 		JBrowse link
G MIR452 microRNA 452 acts_upstream_of_or_within ISO (PMID:21098571) MGI PMID:21098571 NCBI chr  X:151,959,628...151,959,712
Ensembl chr  X:151,959,628...151,959,712 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18539270) Ensembl
MGI		 PMID:18539270 GO_REF:0000107 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360 		JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954 		JBrowse link
G FOLR1 folate receptor alpha involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20144608) Ensembl
MGI		 PMID:20144608 GO_REF:0000107 NCBI chr 4:173,526,091...173,530,229
Ensembl chr 4:173,524,969...173,530,229 		JBrowse link
G NRP1 neuropilin 1 NOT|involved_in ISO (MGI:5693177|PMID:26053665) BHF-UCL PMID:26053665 MGI:5693177 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18539270) Ensembl
MGI		 PMID:18539270 GO_REF:0000107 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
cardioblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECE2 endothelin converting enzyme 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 3:184,276,022...184,293,031
Ensembl chr 3:184,276,011...184,293,031 		JBrowse link
G EEF1AKMT4-ECE2 EEF1AKMT4-ECE2 readthrough involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 3:184,249,672...184,293,031
Ensembl chr 3:184,249,695...184,293,031 		JBrowse link
G EOMES eomesodermin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21822279) Ensembl
MGI		 PMID:21822279 GO_REF:0000107 NCBI chr 3:27,715,953...27,722,713
Ensembl chr 3:27,715,949...27,722,711 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IDA (PMID:15896309) UniProt PMID:15896309 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
hematopoietic stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme involved_in IC (PMID:7876104) BHF-UCL PMID:7876104 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:75,522,469...75,546,992
Ensembl chr14:75,522,455...75,546,993 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9028316) Ensembl
MGI		 PMID:9028316 GO_REF:0000107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G CDK6 cyclin dependent kinase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21508411) Ensembl
MGI		 PMID:21508411 GO_REF:0000107 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573 		JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19137022) Ensembl
MGI		 PMID:19137022 GO_REF:0000107 NCBI chr15:92,900,324...93,027,996
Ensembl chr15:92,886,203...93,027,996 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17554309) Ensembl
MGI		 PMID:17554309 GO_REF:0000107 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21148566) Ensembl
MGI		 PMID:21148566 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826 		JBrowse link
G HOXB4 homeobox B4 involved_in IDA (PMID:18932205) BHF-UCL PMID:18932205 NCBI chr17:48,575,507...48,578,350
Ensembl chr17:48,575,507...48,578,350 		JBrowse link
G LMBR1L limb development membrane protein 1 like involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:49,097,139...49,110,847
Ensembl chr12:49,097,136...49,110,900 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16324150) Ensembl
MGI		 PMID:16324150 GO_REF:0000107 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272 		JBrowse link
G MEOX1 mesenchyme homeobox 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:43,640,389...43,661,922
Ensembl chr17:43,640,389...43,661,922 		JBrowse link
G MIR125B1 microRNA 125b-1 acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr11:122,099,757...122,099,844
Ensembl chr11:122,099,757...122,099,844 		JBrowse link
G MIR125B2 microRNA 125b-2 acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr21:16,590,237...16,590,325
Ensembl chr21:16,590,237...16,590,325 		JBrowse link
G MIR126 microRNA 126 acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr 9:136,670,602...136,670,686
Ensembl chr 9:136,670,602...136,670,686 		JBrowse link
G MIR130A microRNA 130a acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr11:57,641,198...57,641,286
Ensembl chr11:57,641,198...57,641,286 		JBrowse link
G MIR155 microRNA 155 acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr21:25,573,980...25,574,044
Ensembl chr21:25,573,980...25,574,044 		JBrowse link
G MIR181C microRNA 181c acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr19:13,874,699...13,874,808
Ensembl chr19:13,874,699...13,874,808 		JBrowse link
G MIR193B microRNA 193b acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr16:14,303,967...14,304,049
Ensembl chr16:14,303,967...14,304,049 		JBrowse link
G MIR542 microRNA 542 acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr  X:134,541,341...134,541,437
Ensembl chr  X:134,541,341...134,541,437 		JBrowse link
G MIR99A microRNA 99a acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr21:16,539,089...16,539,169
Ensembl chr21:16,539,089...16,539,169 		JBrowse link
G MIRLET7E microRNA let-7e acts_upstream_of_or_within ISO (PMID:20660734) MGI PMID:20660734 NCBI chr19:51,692,786...51,692,864
Ensembl chr19:51,692,786...51,692,864 		JBrowse link
G MLLT3 MLLT3 super elongation complex subunit involved_in IDA (PMID:31776511) UniProt PMID:31776511 NCBI chr 9:20,341,669...20,622,499
Ensembl chr 9:20,341,669...20,622,499 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IDA (PMID:19778523) UniProt PMID:19778523 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473 		JBrowse link
G SH2B3 SH2B adaptor protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14612394) Ensembl
MGI		 PMID:14612394 GO_REF:0000107 NCBI chr12:111,404,730...111,451,623
Ensembl chr12:111,405,923...111,451,623 		JBrowse link
G SP7 Sp7 transcription factor involved_in IDA (PMID:18932205) BHF-UCL PMID:18932205 NCBI chr12:53,326,575...53,344,793
Ensembl chr12:53,326,575...53,345,315 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20709909) Ensembl
MGI		 PMID:20709909 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14726374)
(PMID:15677556)		 Ensembl
MGI		 PMID:14726374 PMID:15677556 GO_REF:0000107 NCBI chr 1:47,216,290...47,232,335
Ensembl chr 1:47,216,290...47,232,225 		JBrowse link
G TERC telomerase RNA component acts_upstream_of_or_within ISO (PMID:17554309) MGI PMID:17554309 NCBI chr 3:169,764,610...169,765,060
Ensembl chr 3:169,764,610...169,765,047
Ensembl chr 3:169,764,610...169,765,047 		JBrowse link
G TP53 tumor protein p53 involved_in IMP (PMID:30146126) UniProt PMID:30146126 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:96,521,806...96,555,276
Ensembl chr 6:96,521,595...96,555,276 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17554309) Ensembl
MGI		 PMID:17554309 GO_REF:0000107 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11588035) Ensembl
MGI		 PMID:11588035 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412 		JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GGT1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chr22:24,583,750...24,628,996
Ensembl chr22:24,594,811...24,629,005 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:17580084) MGI PMID:17580084 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647 		JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18635606) Ensembl
MGI		 PMID:18635606 GO_REF:0000107 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18356246) Ensembl
MGI		 PMID:18356246 GO_REF:0000107 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175 		JBrowse link
mesenchymal stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IMP
IEA		 (PMID:24023731) ARUK-UCL
Ensembl		 PMID:24023731 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G KRT18 keratin 18 ISO RGD PMID:18484094 RGD:27226811 NCBI chr12:52,948,855...52,952,906
Ensembl chr12:52,948,871...52,952,906 		JBrowse link
G MIR346 microRNA 346 involved_in IMP (PMID:24023731) ARUK-UCL PMID:24023731 NCBI chr10:86,264,694...86,264,788
Ensembl chr10:86,264,694...86,264,788 		JBrowse link
negative regulation of amniotic stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G REST RE1 silencing transcription factor involved_in IMP (PMID:20942606) UniProt PMID:20942606 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808 		JBrowse link
negative regulation of cardiac muscle cell myoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IDA (PMID:21199191) UniProt PMID:21199191 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
negative regulation of hematopoietic stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA9 heat shock protein family A (Hsp70) member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:138,553,756...138,575,401
Ensembl chr 5:138,553,756...138,575,675 		JBrowse link
G N4BP2L2 NEDD4 binding protein 2 like 2 involved_in IMP (PMID:19506020) UniProt PMID:19506020 NCBI chr13:32,432,485...32,538,868
Ensembl chr13:32,432,417...32,538,885 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:177,230,303...177,264,727
Ensembl chr 2:177,218,667...177,392,756 		JBrowse link
G TCF15 transcription factor 15 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:604,257...610,309
Ensembl chr20:604,257...610,309 		JBrowse link
G TMSB4X thymosin beta 4 X-linked involved_in IDA (PMID:7694679) UniProt PMID:7694679 NCBI chr  X:12,975,110...12,977,223
Ensembl chr  X:12,975,110...12,977,227 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11588035) Ensembl
MGI		 PMID:11588035 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412 		JBrowse link
negative regulation of mesenchymal stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSK3B glycogen synthase kinase 3 beta involved_in IMP (PMID:24023731) ARUK-UCL PMID:24023731 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994 		JBrowse link
G MIR154 microRNA 154 acts_upstream_of_or_within ISO (PMID:25959411) MGI PMID:25959411 NCBI chr14:101,059,755...101,059,838
Ensembl chr14:101,059,755...101,059,838 		JBrowse link
G REST RE1 silencing transcription factor involved_in IMP (PMID:18570921) UniProt PMID:18570921 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808 		JBrowse link
negative regulation of stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS12 Bardet-Biedl syndrome 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22958920) Ensembl
MGI		 PMID:22958920 GO_REF:0000107 NCBI chr 4:122,700,442...122,744,939
Ensembl chr 4:122,732,702...122,744,942 		JBrowse link
G CCNK cyclin K acts_upstream_of_or_within ISO (PMID:22547058) MGI PMID:22547058 NCBI chr14:99,481,409...99,512,440
Ensembl chr14:99,481,169...99,535,044 		JBrowse link
G CDK12 cyclin dependent kinase 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22547058) Ensembl
MGI		 PMID:22547058 GO_REF:0000107 NCBI chr17:39,461,486...39,567,559
Ensembl chr17:39,461,486...39,567,559 		JBrowse link
G CDK13 cyclin dependent kinase 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22547058) Ensembl
MGI		 PMID:22547058 GO_REF:0000107 NCBI chr 7:39,950,256...40,099,580
Ensembl chr 7:39,950,121...40,099,580 		JBrowse link
G ESRRB estrogen related receptor beta involved_in ISS UniProt GO_REF:0000024 NCBI chr14:76,310,777...76,501,837
Ensembl chr14:76,310,712...76,501,837 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19303854) Ensembl
MGI		 PMID:19303854 GO_REF:0000107 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IMP (PMID:19682396) UniProt PMID:19682396 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IMP (PMID:19682396) UniProt PMID:19682396 NCBI chr 1:2,528,745...2,530,263
Ensembl chr 1:2,528,745...2,530,263 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA
IMP
ISS		 (PMID:21235343) Ensembl
UniProt		 PMID:21235343 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IMP (PMID:19682396) UniProt PMID:19682396 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999 		JBrowse link
G LBH LBH regulator of WNT signaling pathway involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:30,231,534...30,260,028
Ensembl chr 2:30,231,534...30,323,730 		JBrowse link
G MIR125A microRNA 125a acts_upstream_of_or_within ISO (PMID:22751012) MGI PMID:22751012 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339 		JBrowse link
G NANOG Nanog homeobox acts_upstream_of_or_within ISO (PMID:17940068) MGI PMID:17940068 NCBI chr12:7,789,402...7,799,146
Ensembl chr12:7,787,794...7,799,146 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:22977234) MGI PMID:22977234 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877 		JBrowse link
G NELFB negative elongation factor complex member B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:137,255,327...137,273,542
Ensembl chr 9:137,255,327...137,273,542 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IMP (PMID:19682396) UniProt PMID:19682396 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25335925) Ensembl
MGI		 PMID:25335925 GO_REF:0000107 NCBI chr17:42,313,324...42,388,442
Ensembl chr17:42,313,324...42,388,568 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18356246) Ensembl
MGI		 PMID:18356246 GO_REF:0000107 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,596,111...5,612,952
Ensembl chr11:5,596,109...5,612,958 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20516196) Ensembl
MGI		 PMID:20516196 GO_REF:0000107 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424 		JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in IMP (PMID:32169943) UniProt PMID:32169943 NCBI chr 1:28,736,624...28,769,775
Ensembl chr 1:28,736,621...28,769,775 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606 		JBrowse link
neural crest cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368932)
(PMID:17067568)		 Ensembl
MGI		 PMID:16368932 PMID:17067568 GO_REF:0000107 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866 		JBrowse link
G ARB2A ARB2 cotranscriptional regulator A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:93,617,725...94,111,699
Ensembl chr 5:93,617,725...94,111,699 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19793887) Ensembl
MGI		 PMID:19793887 GO_REF:0000107 NCBI chr10:86,755,763...86,932,844
Ensembl chr10:86,756,596...86,932,825 		JBrowse link
G CDH2 cadherin 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr18:27,932,879...28,177,130
Ensembl chr18:27,932,879...28,177,946 		JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chr10:93,073,475...93,077,885
Ensembl chr10:93,073,475...93,077,885 		JBrowse link
G CYP26C1 cytochrome P450 family 26 subfamily C member 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:17067568) BHF-UCL
MGI
Ensembl		 PMID:17067568 GO_REF:0000024 GO_REF:0000107 NCBI chr10:93,060,798...93,069,540
Ensembl chr10:93,060,798...93,069,540 		JBrowse link
G EDN1 endothelin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15327783), (PMID:9671575) Ensembl
MGI		 PMID:9671575 PMID:15327783 GO_REF:0000107 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194 		JBrowse link
G EDNRA endothelin receptor type A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15327783)
(PMID:15306564), (PMID:9449664)		 Ensembl
MGI		 PMID:9449664 PMID:15306564 PMID:15327783 GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16839542) Ensembl
MGI		 PMID:16839542 GO_REF:0000107 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16839542) Ensembl
MGI		 PMID:16839542 GO_REF:0000107 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9671575) Ensembl
MGI		 PMID:9671575 GO_REF:0000107 NCBI chr 4:173,526,091...173,530,229
Ensembl chr 4:173,524,969...173,530,229 		JBrowse link
G KBTBD8 kelch repeat and BTB domain containing 8 involved_in IMP
IEA		 (PMID:26399832) UniProt
InterPro		 PMID:26399832 GO_REF:0000002 NCBI chr 3:66,998,307...67,011,210
Ensembl chr 3:66,998,307...67,011,210 		JBrowse link
G KLHL12 kelch like family member 12 involved_in IMP (PMID:27716508) UniProt PMID:27716508 NCBI chr 1:202,891,120...202,928,599
Ensembl chr 1:202,891,116...202,928,636 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr16:30,114,105...30,123,220
Ensembl chr16:30,114,105...30,123,506 		JBrowse link
G NOLC1 nucleolar and coiled-body phosphoprotein 1 involved_in IMP (PMID:26399832) UniProt PMID:26399832 NCBI chr10:102,152,389...102,163,870
Ensembl chr10:102,152,176...102,163,871 		JBrowse link
G NRG1 neuregulin 1 involved_in TAS (PMID:17432114) BHF-UCL PMID:17432114 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666 		JBrowse link
G PDCD6 programmed cell death 6 involved_in IMP (PMID:27716508) UniProt PMID:27716508 NCBI chr 5:271,646...314,974
Ensembl chr 5:271,621...314,974 		JBrowse link
G PEF1 penta-EF-hand domain containing 1 involved_in IMP (PMID:27716508) UniProt PMID:27716508 NCBI chr 1:31,629,866...31,644,876
Ensembl chr 1:31,629,866...31,644,896 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IMP (PMID:12444107) BHF-UCL PMID:12444107 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:981,770...986,979
Ensembl chr16:981,444...986,979 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15691760) Ensembl
MGI		 PMID:15691760 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TAPT1 transmembrane anterior posterior transformation 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:16,160,505...16,227,390
Ensembl chr 4:16,160,505...16,227,410 		JBrowse link
G TCOF1 treacle ribosome biogenesis factor 1 involved_in IMP (PMID:26399832) UniProt PMID:26399832 NCBI chr 5:150,357,697...150,400,293
Ensembl chr 5:150,357,629...150,400,308 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:8622766) MGI PMID:8622766 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
neural crest cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26295701) Ensembl
MGI		 PMID:26295701 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826 		JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:107,859,035...108,382,098
Ensembl chr 5:107,859,035...108,382,098 		JBrowse link
G FRZB frizzled related protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:182,833,275...182,866,637
Ensembl chr 2:182,833,275...182,866,637 		JBrowse link
G HTR2B 5-hydroxytryptamine receptor 2B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:231,108,230...231,125,042
Ensembl chr 2:231,108,230...231,125,042 		JBrowse link
G LRP6 LDL receptor related protein 6 involved_in IDA (PMID:11029007) BHF-UCL PMID:11029007 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS (PMID:21610032) UniProt PMID:21610032 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257 		JBrowse link
G OTUD5 OTU deubiquitinase 5 involved_in IMP (PMID:33523931) UniProt PMID:33523931 NCBI chr  X:48,922,024...48,958,381
Ensembl chr  X:48,922,024...48,958,386 		JBrowse link
G RPS7 ribosomal protein S7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171) Ensembl
MGI		 PMID:15384171 GO_REF:0000107 NCBI chr 2:3,575,260...3,580,920
Ensembl chr 2:3,575,260...3,580,920 		JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19793887) Ensembl
MGI		 PMID:19793887 GO_REF:0000107 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,528...51,085,045 		JBrowse link
G WNT10A Wnt family member 10A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17286598) Ensembl
MGI		 PMID:17286598 GO_REF:0000107 NCBI chr 2:218,874,116...218,893,928
Ensembl chr 2:218,880,852...218,899,581 		JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chr13:99,981,784...99,986,765
Ensembl chr13:99,981,784...99,986,765 		JBrowse link
G ZIC5 Zic family member 5 acts_upstream_of_or_within ISO (PMID:15136147) MGI PMID:15136147 NCBI chr13:99,962,964...99,971,909
Ensembl chr13:99,962,964...99,971,767 		JBrowse link
neural crest cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20130188) Ensembl
MGI		 PMID:20130188 GO_REF:0000107 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473 		JBrowse link
G WNT8A Wnt family member 8A involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:138,077,367...138,092,365
Ensembl chr 5:138,083,990...138,092,365 		JBrowse link
neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSC goosecoid homeobox involved_in IMP (PMID:24290375) UniProt PMID:24290375 NCBI chr14:94,768,223...94,770,113
Ensembl chr14:94,768,223...94,770,113 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226263) Ensembl
MGI		 PMID:15226263 GO_REF:0000107 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330 		JBrowse link
G ANXA6 annexin A6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:151,100,706...151,157,779
Ensembl chr 5:151,100,706...151,157,815 		JBrowse link
G CFL1 cofilin 1 acts_upstream_of_or_within ISO (PMID:15649475) MGI PMID:15649475 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026 		JBrowse link
G CORO1C coronin 1C involved_in IMP
IBA
IEA		 (PMID:25074804) UniProt
GO_Central
TreeGrafter		 PMID:25074804 GO_REF:0000033 GO_REF:0000118 NCBI chr12:108,645,109...108,731,518
Ensembl chr12:108,645,109...108,731,526 		JBrowse link
G EDN3 endothelin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9624616) Ensembl
MGI		 PMID:9624616 GO_REF:0000107 NCBI chr20:59,300,611...59,325,992
Ensembl chr20:59,300,443...59,325,992 		JBrowse link
G EDNRB endothelin receptor type B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10591209) Ensembl
MGI		 PMID:10591209 GO_REF:0000107 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529 		JBrowse link
G EFNB1 ephrin B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037550) Ensembl
MGI		 PMID:15037550 GO_REF:0000107 NCBI chr  X:68,829,021...68,842,160
Ensembl chr  X:68,829,021...68,842,160 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:211,375,717...212,538,802
Ensembl chr 2:211,375,717...212,538,841 		JBrowse link
G FGF19 fibroblast growth factor 19 acts_upstream_of_or_within ISO (PMID:15789410) MGI PMID:15789410 NCBI chr11:69,698,238...69,704,022
Ensembl chr11:69,698,238...69,704,022 		JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23144817)
(PMID:15996652), (PMID:19700621)		 Ensembl
MGI		 PMID:15996652 PMID:19700621 PMID:23144817 GO_REF:0000107 NCBI chr 2:236,161,340...236,168,386
Ensembl chr 2:236,165,236...236,168,386 		JBrowse link
G GDNF glial cell derived neurotrophic factor acts_upstream_of_or_within IDA (PMID:15242795) MGI PMID:15242795 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14659802) Ensembl
MGI		 PMID:14659802 GO_REF:0000107 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G HTR2B 5-hydroxytryptamine receptor 2B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:231,108,230...231,125,042
Ensembl chr 2:231,108,230...231,125,042 		JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16687132) Ensembl
MGI		 PMID:16687132 GO_REF:0000107 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730 		JBrowse link
G KITLG KIT ligand involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11401406) Ensembl
MGI		 PMID:11401406 GO_REF:0000107 NCBI chr12:88,492,793...88,580,471
Ensembl chr12:88,492,793...88,580,851 		JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16316641) Ensembl
MGI		 PMID:16316641 GO_REF:0000107 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262 		JBrowse link
G NRTN neurturin acts_upstream_of_or_within IDA (PMID:15242795) MGI PMID:15242795 NCBI chr19:5,805,067...5,828,324
Ensembl chr19:5,805,067...5,828,324 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16423343) Ensembl
MGI		 PMID:16423343 GO_REF:0000107 NCBI chr20:18,024,152...18,059,188
Ensembl chr20:17,956,979...18,059,188 		JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,887...222,298,998 		JBrowse link
G PAX6 paired box 6 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9079035 GO_REF:0000107 RGD:8552342 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA
IBA
ISS		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,369,740...28,500,364
Ensembl chr 1:28,369,582...28,500,364 		JBrowse link
G RADIL Rap associating with DIL domain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:4,797,055...4,883,716
Ensembl chr 7:4,797,055...4,883,716 		JBrowse link
G RET ret proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242795) Ensembl
MGI		 PMID:15242795 GO_REF:0000107 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351 		JBrowse link
G SEMA3A semaphorin 3A involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:83,955,777...84,492,725
Ensembl chr 7:83,955,777...84,492,724 		JBrowse link
G SEMA3B semaphorin 3B involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:50,267,652...50,277,546
Ensembl chr 3:50,267,558...50,277,546 		JBrowse link
G SEMA3C semaphorin 3C involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11688556) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:11688556 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:80,742,538...80,922,389
Ensembl chr 7:80,742,538...80,922,359 		JBrowse link
G SEMA3D semaphorin 3D involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:84,995,553...85,250,243
Ensembl chr 7:84,995,553...85,187,056 		JBrowse link
G SEMA3E semaphorin 3E involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:83,363,238...83,649,139
Ensembl chr 7:83,363,238...83,649,139 		JBrowse link
G SEMA3F semaphorin 3F involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:50,155,058...50,189,075
Ensembl chr 3:50,155,045...50,189,075 		JBrowse link
G SEMA3G semaphorin 3G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:52,433,035...52,445,103
Ensembl chr 3:52,433,035...52,445,103 		JBrowse link
G SEMA4A semaphorin 4A involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:156,147,373...156,177,744
Ensembl chr 1:156,147,366...156,177,752 		JBrowse link
G SEMA4B semaphorin 4B involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:90,184,920...90,229,661
Ensembl chr15:90,160,604...90,229,679 		JBrowse link
G SEMA4C semaphorin 4C involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:96,859,718...96,870,830
Ensembl chr 2:96,859,718...96,870,757 		JBrowse link
G SEMA4D semaphorin 4D involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:89,360,787...89,498,113
Ensembl chr 9:89,360,787...89,498,130 		JBrowse link
G SEMA4F ssemaphorin 4F involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:74,654,247...74,709,713
Ensembl chr 2:74,654,228...74,683,853 		JBrowse link
G SEMA4G semaphorin 4G involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:100,969,504...100,985,616
Ensembl chr10:100,969,504...100,985,871 		JBrowse link
G SEMA5A semaphorin 5A involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075 		JBrowse link
G SEMA5B semaphorin 5B involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:122,909,082...123,028,605
Ensembl chr 3:122,909,082...123,028,605 		JBrowse link
G SEMA6A semaphorin 6A involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:116,443,555...116,574,823
Ensembl chr 5:116,443,555...116,574,823 		JBrowse link
G SEMA6B semaphorin 6B involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:4,542,593...4,559,684
Ensembl chr19:4,542,593...4,581,776 		JBrowse link
G SEMA6C semaphorin 6C involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:151,131,685...151,146,631
Ensembl chr 1:151,131,685...151,146,631 		JBrowse link
G SEMA6D semaphorin 6D involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:47,184,089...47,774,228
Ensembl chr15:47,184,101...47,774,228 		JBrowse link
G SEMA7A semaphorin 7A (JohnMiltonHagen blood group) involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:74,409,289...74,433,958
Ensembl chr15:74,409,289...74,433,958 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15936751) UniProt
MGI
Ensembl		 PMID:15936751 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16687132) Ensembl
MGI		 PMID:16687132 GO_REF:0000107 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545 		JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr22:37,972,312...37,984,555
Ensembl chr22:37,970,686...37,987,422 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:981,770...986,979
Ensembl chr16:981,444...986,979 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:15652707)
(PMID:20501333)		 UniProt
MGI		 PMID:15652707 PMID:20501333 GO_REF:0000024 NCBI chr22:19,756,703...19,783,593
Ensembl chr22:19,756,703...19,783,593 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:12522767) MGI PMID:12522767 NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057 		JBrowse link
neural crest cell migration involved in autonomic nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN1 fibronectin 1 involved_in IDA (PMID:26571399) MGI PMID:26571399 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073 		JBrowse link
G NRP1 neuropilin 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:205,682,501...205,798,131
Ensembl chr 2:205,681,990...205,798,133 		JBrowse link
G PHOX2B paired like homeobox 2B involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:41,744,082...41,748,725
Ensembl chr 4:41,744,082...41,748,725 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 7:83,955,777...84,492,725
Ensembl chr 7:83,955,777...84,492,724 		JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,155,058...50,189,075
Ensembl chr 3:50,155,045...50,189,075 		JBrowse link
neural crest cell migration involved in heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOLR1 folate receptor alpha involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323 		JBrowse link
neural crest cell migration involved in sympathetic nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEMA3A semaphorin 3A involved_in ISO (MGI:5567908|PMID:19325129) BHF-UCL PMID:19325129 MGI:5567908 NCBI chr 7:83,955,777...84,492,725
Ensembl chr 7:83,955,777...84,492,724 		JBrowse link
positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641 		JBrowse link
G SEMA3C semaphorin 3C involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:80,742,538...80,922,389
Ensembl chr 7:80,742,538...80,922,359 		JBrowse link
positive regulation of cardioblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487 		JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in ISS
IEA		 (PMID:8900537) BHF-UCL
Ensembl		 PMID:8900537 GO_REF:0000107 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311 		JBrowse link
G TBX5 T-box transcription factor 5 involved_in IDA (PMID:11431700) UniProt PMID:11431700 NCBI chr12:114,353,911...114,408,442
Ensembl chr12:114,353,911...114,408,442 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IDA (PMID:15896309) UniProt PMID:15896309 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
positive regulation of hematopoietic stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXC1 forkhead box C1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897 		JBrowse link
positive regulation of mesenchymal stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in IMP (PMID:18672106) UniProt PMID:18672106 NCBI chr11:65,538,559...65,558,359
Ensembl chr11:65,538,559...65,558,930 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in IDA (PMID:21401405) UniProt PMID:21401405 NCBI chr12:23,529,504...24,562,650
Ensembl chr12:23,529,504...24,562,544 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IDA (PMID:21401405) UniProt PMID:21401405 NCBI chr11:15,966,449...16,738,477
Ensembl chr11:15,966,449...16,739,591 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IDA (PMID:21401405) UniProt PMID:21401405 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
positive regulation of stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15781473) Ensembl
MGI		 PMID:15781473 GO_REF:0000107 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO (PMID:22064483) MGI PMID:22064483 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994 		JBrowse link
G HOXB4 homeobox B4 involved_in IDA (PMID:18932205) BHF-UCL PMID:18932205 NCBI chr17:48,575,507...48,578,350
Ensembl chr17:48,575,507...48,578,350 		JBrowse link
G MEN1 menin 1 acts_upstream_of_or_within ISO (PMID:17927973) MGI PMID:17927973 NCBI chr11:64,803,516...64,811,294
Ensembl chr11:64,803,510...64,811,294 		JBrowse link
G MIR100 microRNA 100 acts_upstream_of_or_within ISO (PMID:20439489) MGI PMID:20439489 NCBI chr11:122,152,229...122,152,308
Ensembl chr11:122,152,229...122,152,308 		JBrowse link
G MIR137 microRNA 137 acts_upstream_of_or_within ISO (PMID:20439489) MGI PMID:20439489 NCBI chr 1:98,046,070...98,046,171
Ensembl chr 1:98,046,070...98,046,171 		JBrowse link
G MIR34A microRNA 34a acts_upstream_of_or_within ISO (PMID:20439489) MGI PMID:20439489 NCBI chr 1:9,151,668...9,151,777
Ensembl chr 1:9,151,668...9,151,777 		JBrowse link
G MTCH2 mitochondrial carrier 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:47,604,317...47,642,559
Ensembl chr11:47,617,315...47,642,607 		JBrowse link
G NUDT21 nudix hydrolase 21 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:56,429,133...56,451,332
Ensembl chr16:56,429,133...56,452,199 		JBrowse link
G PTN pleiotrophin involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774 		JBrowse link
G PWP1 PWP1 homolog, endonuclein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25335925) Ensembl
MGI		 PMID:25335925 GO_REF:0000107 NCBI chr12:107,685,799...107,713,162
Ensembl chr12:107,685,799...107,713,162 		JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP (PMID:26990106) UniProt PMID:26990106 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871 		JBrowse link
G SIRT6 sirtuin 6 involved_in ISS
IDA
IEA		 (PMID:27912097) UniProt
Ensembl		 PMID:27912097 GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20123909) Ensembl
MGI		 PMID:20123909 GO_REF:0000107 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892 		JBrowse link
G SP7 Sp7 transcription factor involved_in IDA (PMID:18932205) BHF-UCL PMID:18932205 NCBI chr12:53,326,575...53,344,793
Ensembl chr12:53,326,575...53,345,315 		JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23070813) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:23070813 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252 		JBrowse link
G TCF15 transcription factor 15 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:604,257...610,309
Ensembl chr20:604,257...610,309 		JBrowse link
G VSIR V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:22751012) MGI PMID:22751012 NCBI chr10:71,747,556...71,773,520
Ensembl chr10:71,747,556...71,773,520 		JBrowse link
regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENG endoglin NOT|involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 9:127,815,016...127,854,658
Ensembl chr 9:127,815,013...127,854,658 		JBrowse link
regulation of hematopoietic stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in TAS Reactome Reactome:R-HSA-8939236 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G CDK6 cyclin dependent kinase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25342715) Ensembl
MGI		 PMID:25342715 GO_REF:0000107 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573 		JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:37,099,210...37,156,980
Ensembl chr 2:37,099,210...37,157,522 		JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in TAS Reactome Reactome:R-HSA-8939236 NCBI chr20:34,363,273...34,511,773
Ensembl chr20:34,363,235...34,511,773 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISS UniProt GO_REF:0000024 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342 		JBrowse link
G OSM oncostatin M involved_in TAS (PMID:1542793) GO_Central PMID:1542793 NCBI chr22:30,262,829...30,266,851
Ensembl chr22:30,262,829...30,266,851 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PUS7 pseudouridine synthase 7 involved_in IMP (PMID:29628141) UniProt PMID:29628141 NCBI chr 7:105,456,501...105,522,271
Ensembl chr 7:105,439,661...105,522,271 		JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IDA (PMID:27141965) ParkinsonsUK-UCL PMID:27141965 NCBI chr16:30,957,754...30,984,664
Ensembl chr16:30,957,294...30,984,664 		JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:28,736,624...28,769,775
Ensembl chr 1:28,736,621...28,769,775 		JBrowse link
regulation of mesenchymal stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD1 frizzled class receptor 1 involved_in IMP (PMID:20039315) BHF-UCL PMID:20039315 NCBI chr 7:91,264,433...91,271,326
Ensembl chr 7:91,264,433...91,271,326 		JBrowse link
G MIR21 microRNA 21 ISO RGD PMID:27798620 RGD:41404703 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IMP (PMID:21596750) UniProt PMID:21596750 NCBI chr 4:54,229,293...54,298,245
Ensembl chr 4:54,229,280...54,298,245 		JBrowse link
G SLC4A11 solute carrier family 4 member 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,227,417...3,239,559
Ensembl chr20:3,227,417...3,239,559 		JBrowse link
G WNT3 Wnt family member 3 involved_in IMP (PMID:20039315) BHF-UCL PMID:20039315 NCBI chr17:46,762,506...46,818,692
Ensembl chr17:46,762,506...46,833,154 		JBrowse link
regulation of neural crest cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A NOT|involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr10:86,755,763...86,932,844
Ensembl chr10:86,756,596...86,932,825 		JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A NOT|involved_in ISO (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr10:86,755,763...86,932,844
Ensembl chr10:86,756,596...86,932,825 		JBrowse link
regulation of stem cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD3 chromodomain helicase DNA binding protein 3 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr17:7,884,796...7,912,755
Ensembl chr17:7,884,796...7,912,760 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr12:6,570,082...6,607,379
Ensembl chr12:6,570,082...6,614,524 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:15713842) MGI PMID:15713842 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010 		JBrowse link
G GATAD2A GATA zinc finger domain containing 2A involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr19:19,385,843...19,508,932
Ensembl chr19:19,385,826...19,508,932 		JBrowse link
G GATAD2B GATA zinc finger domain containing 2B involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr 1:153,804,725...153,922,972
Ensembl chr 1:153,789,030...153,923,360 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in TAS (PMID:23626767) ParkinsonsUK-UCL PMID:23626767 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr 1:32,292,083...32,333,626
Ensembl chr 1:32,292,083...32,333,635 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308 		JBrowse link
G KDM3A lysine demethylase 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17938240) Ensembl
MGI		 PMID:17938240 GO_REF:0000107 NCBI chr 2:86,437,044...86,492,716
Ensembl chr 2:86,440,647...86,492,716 		JBrowse link
G KDM4C lysine demethylase 4C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17938240) Ensembl
MGI		 PMID:17938240 GO_REF:0000107 NCBI chr 9:6,720,863...7,175,648
Ensembl chr 9:6,757,641...7,175,648 		JBrowse link
G MBD3 methyl-CpG binding domain protein 3 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr19:1,573,596...1,592,865
Ensembl chr19:1,573,596...1,592,865 		JBrowse link
G MIR146A microRNA 146a involved_in IDA (PMID:29384235) ARUK-UCL PMID:29384235 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450 		JBrowse link
G MIR302B microRNA 302b involved_in IMP (PMID:21490602) BHF-UCL PMID:21490602 NCBI chr 4:112,648,485...112,648,557
Ensembl chr 4:112,648,485...112,648,557 		JBrowse link
G MIR372 microRNA 372 involved_in IMP (PMID:21490602) BHF-UCL PMID:21490602 NCBI chr19:53,787,890...53,787,956
Ensembl chr19:53,787,890...53,787,956 		JBrowse link
G MTA1 metastasis associated 1 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729 		JBrowse link
G MTA2 metastasis associated 1 family member 2 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr11:62,593,214...62,601,865
Ensembl chr11:62,593,214...62,601,865 		JBrowse link
G MTA3 metastasis associated 1 family member 3 involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr 2:42,494,110...42,756,946
Ensembl chr 2:42,494,569...42,756,947 		JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:6,599,239...6,633,044
Ensembl chr 5:6,599,239...6,633,291 		JBrowse link
G OCIAD1 OCIA domain containing 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:48,805,156...48,861,815
Ensembl chr 4:48,805,212...48,861,817 		JBrowse link
G PRDM4 PR/SET domain 4 involved_in ISO PMID:23048031 ParkinsonsUK-UCL PMID:23048031 RGD:10054084 NCBI chr12:107,732,871...107,761,137
Ensembl chr12:107,732,871...107,761,272 		JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr 1:32,651,208...32,686,211
Ensembl chr 1:32,651,142...32,686,211 		JBrowse link
G RBBP7 RB binding protein 7, chromatin remodeling factor involved_in NAS (PMID:22560079) ComplexPortal PMID:22560079 NCBI chr  X:16,844,341...16,870,362
Ensembl chr  X:16,839,283...16,870,362 		JBrowse link
G SMYD5 SMYD family member 5 involved_in IEA
ISS
IMP		 (PMID:28951459) Ensembl
UniProt		 PMID:28951459 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:73,214,245...73,227,221
Ensembl chr 2:73,214,222...73,227,221 		JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21385842) Ensembl
MGI		 PMID:21385842 GO_REF:0000107 NCBI chr19:49,340,595...49,362,416
Ensembl chr19:49,340,595...49,362,457 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IMP (PMID:21490602) BHF-UCL PMID:21490602 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,601...30,694,142 		JBrowse link
respiratory basal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16214823) Ensembl
MGI		 PMID:16214823 GO_REF:0000107 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059 		JBrowse link
squamous basal epithelial stem cell differentiation involved in prostate gland acinus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:17215304) UniProt
MGI		 PMID:17215304 GO_REF:0000024 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15371309) Ensembl
MGI		 PMID:15371309 GO_REF:0000107 NCBI chr 3:189,596,746...189,897,276
Ensembl chr 3:189,631,389...189,897,276 		JBrowse link
stem cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:8673125) MGI PMID:8673125 NCBI chr12:85,280,220...85,301,784
Ensembl chr12:85,280,220...85,301,784 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8623928) Ensembl
MGI		 PMID:8623928 GO_REF:0000107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G MIR203B microRNA 203b acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr14:104,117,418...104,117,503
Ensembl chr14:104,117,418...104,117,503 		JBrowse link
G MIR7-1 microRNA 7-1 acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr 9:83,969,748...83,969,857
Ensembl chr 9:83,969,748...83,969,857 		JBrowse link
G MSI2 musashi RNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:57,255,851...57,701,581
Ensembl chr17:57,255,851...57,684,689 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IMP (PMID:21911094) UniProt PMID:21911094 NCBI chr 1:198,638,713...198,757,476
Ensembl chr 1:198,638,457...198,757,476 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
G WNT7A Wnt family member 7A involved_in IDA (PMID:12843296) BHF-UCL PMID:12843296 NCBI chr 3:13,816,258...13,880,071
Ensembl chr 3:13,816,258...13,880,071 		JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr22:45,920,366...45,977,162
Ensembl chr22:45,920,366...45,977,162 		JBrowse link
stem cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMRTA2 DMRT like family A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21576465) Ensembl
MGI		 PMID:21576465 GO_REF:0000107 NCBI chr 1:50,417,550...50,423,443
Ensembl chr 1:50,417,550...50,423,443 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17462603) Ensembl
MGI		 PMID:17462603 GO_REF:0000107 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20228271) Ensembl
MGI		 PMID:20228271 GO_REF:0000107 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892 		JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20228271) Ensembl
MGI		 PMID:20228271 GO_REF:0000107 NCBI chr20:64,047,582...64,049,639
Ensembl chr20:64,047,582...64,049,639 		JBrowse link
trunk neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16316641) Ensembl
MGI		 PMID:16316641 GO_REF:0000107 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312 		JBrowse link
G NRP2 neuropilin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16319111) Ensembl
MGI		 PMID:16319111 GO_REF:0000107 NCBI chr 2:205,682,501...205,798,131
Ensembl chr 2:205,681,990...205,798,133 		JBrowse link
G SEMA3F semaphorin 3F involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16319111) Ensembl
MGI		 PMID:16319111 GO_REF:0000107 NCBI chr 3:50,155,058...50,189,075
Ensembl chr 3:50,155,045...50,189,075 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15337776) Ensembl
MGI		 PMID:15337776 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
ventral trunk neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:205,682,501...205,798,131
Ensembl chr 2:205,681,990...205,798,133 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (MGI:3848580|PMID:19386662) ParkinsonsUK-UCL PMID:19386662 MGI:3848580 NCBI chr 7:83,955,777...84,492,725
Ensembl chr 7:83,955,777...84,492,724 		JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,155,058...50,189,075
Ensembl chr 3:50,155,045...50,189,075 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    developmental process 7610
      cellular developmental process 5182
        cell differentiation 5181
          stem cell differentiation 304
            angioblast cell differentiation 0
            cardioblast differentiation + 20
            hematopoietic stem cell differentiation + 48
            hepatoblast differentiation 4
            limb basal epidermal cell differentiation + 0
            mesenchymal stem cell differentiation + 15
            negative regulation of stem cell differentiation + 32
            neural crest cell differentiation + 105
            positive regulation of stem cell differentiation + 27
            regulation of stem cell differentiation + 98
            respiratory basal cell differentiation 1
            squamous basal epithelial stem cell differentiation involved in prostate gland acinus development 2
            stem cell development + 100
            stem cell fate commitment + 11
paths to the root