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ONTOLOGY REPORT - ANNOTATIONS

Term:formation of anatomical boundary
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Accession:GO:0048859 term browser browse the term
Definition:The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.


show annotations for term's descendants           Sort by:
formation of anatomical boundary term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO
IEA 		MGI:3612535 (PMID:16368929)
GO_REF:0000107 		RGD
Ensembl		 PMID:16368929 GO_REF:0000107 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO
IEA 		MGI:2158732 (PMID:11311163)
GO_REF:0000107 		RGD
Ensembl		 PMID:11311163 GO_REF:0000107 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA 		MGI:1857796 (PMID:9731532)
GO_REF:0000107 		RGD
Ensembl		 PMID:9731532 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO
IEA 		MGI:1858049 (PMID:9420335)
GO_REF:0000107 		RGD
Ensembl		 PMID:9420335 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 acts_upstream_of_or_within ISO
IEA 		MGI:1856155|MGI:1856158 (PMID:9169845)
GO_REF:0000107 		RGD
Ensembl		 PMID:9169845 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15857913) 		Ensembl
RGD		 PMID:15857913 GO_REF:0000107 NCBI chr 5:121,691,370...121,828,035
Ensembl chr 5:121,691,393...121,827,992 		JBrowse link
sensory organ boundary specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntf4 neurotrophin 4 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		PMID:10479455
GO_REF:0000107
MGI:1933845 (PMID:10479455) 		Ensembl
RGD		 PMID:10479455 PMID:10479455 GO_REF:0000107, RGD:8554019 NCBI chr 1:95,893,560...95,896,391
Ensembl chr 1:95,893,457...95,897,243 		JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IDA RGD PMID:25281935 RGD:12832757 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure formation involved in morphogenesis 1384
        formation of anatomical boundary 7
          equator specification 0
          forebrain-midbrain boundary formation 1
          formation of a compartment boundary 0
          formation of animal organ boundary + 1
          formation of plant organ boundary + 0
          hindbrain-spinal cord boundary formation 0
          midbrain-hindbrain boundary initiation 1
          rhombomere boundary formation 0
          zona limitans intrathalamica formation 1
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        anatomical structure morphogenesis 3019
          anatomical structure formation involved in morphogenesis 1384
            formation of anatomical boundary 7
              equator specification 0
              forebrain-midbrain boundary formation 1
              formation of a compartment boundary 0
              formation of animal organ boundary + 1
              formation of plant organ boundary + 0
              hindbrain-spinal cord boundary formation 0
              midbrain-hindbrain boundary initiation 1
              rhombomere boundary formation 0
              zona limitans intrathalamica formation 1
paths to the root