ONTOLOGY REPORT - ANNOTATIONS
Term: neural nucleus development
Accession: GO:0048857
browse the term
Definition: The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.
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Hoxb2
homeobox B2
acts_upstream_of_or_within
ISO
MGI:2151772 (MGI:85074|PMID:9012503)
RGD
PMID:9012503
MGI:85074
NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192
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Atf2
activating transcription factor 2
involved_in
ISO
MGI:3720850 (MGI:5007596|PMID:21533046)
RGD
PMID:21533046
MGI:5007596
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
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Foxp2
forkhead box P2
involved_in
ISO
(PMID:11872605)
RGD
PMID:11872605
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
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Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:1857134 (MGI:1891561|PMID:11027399)
RGD
PMID:11027399
MGI:1891561
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Scrib
scribble planar cell polarity protein
acts_upstream_of_or_within
ISO
MGI:2139764 (MGI:4439427|PMID:20215345)
RGD
PMID:20215345
MGI:4439427
NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
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Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345)
RGD
PMID:20215345
MGI:4439427
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
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Slc4a7
solute carrier family 4 member 7
acts_upstream_of_or_within
ISO
MGI:2682641 (MGI:2680888|PMID:12808454)
RGD
PMID:12808454
MGI:2680888
NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
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Atf2
activating transcription factor 2
involved_in
ISO
MGI:3720850 (MGI:5007596|PMID:21533046)
RGD
PMID:21533046
MGI:5007596
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
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Hoxa1
homeobox A1
acts_upstream_of_or_within
ISO
MGI:1857504 (MGI:62658|PMID:8102800)
RGD
PMID:8102800
MGI:62658
NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
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Hoxb1
homeo box B1
acts_upstream_of_or_within
ISO
MGI:1857824 (MGI:83677|PMID:8898234)
RGD
PMID:8898234
MGI:83677
NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
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Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (MGI:3709215|PMID:17460091)
Ensembl RGD
PMID:17460091
GO_REF:0000107 MGI:3709215
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
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Kcnc1
potassium voltage-gated channel subfamily C member 1
IEP
RGD
PMID:10482766
RGD:9685780
NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
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Kcnc2
potassium voltage-gated channel subfamily C member 2
IEP
RGD
PMID:10482766
RGD:9685780
NCBI chr 7:47,700,035...47,883,979
Ensembl chr 7:47,700,288...47,883,968
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Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3653645 (MGI:4437145|PMID:20181579) (PMID:11854319)
Ensembl RGD
PMID:11854319 PMID:20181579
GO_REF:0000107 MGI:4437145
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Atf2
activating transcription factor 2
involved_in
ISO
MGI:3720850 (MGI:5007596|PMID:21533046)
RGD
PMID:21533046
MGI:5007596
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
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Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:2158714 (MGI:3721829|PMID:12097474)
RGD
PMID:12097474
MGI:3721829
NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
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Phox2a
paired-like homeobox 2a
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180328|MGI:4438118 (MGI:4849589|PMID:21068058), (MGI:86465|PMID:9115735)
Ensembl RGD
PMID:9115735 PMID:21068058
GO_REF:0000107 MGI:4849589 MGI:86465
NCBI chr 1:156,178,754...156,183,118
Ensembl chr 1:156,178,754...156,183,118
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3512079 (MGI:3701419|PMID:17207476)
Ensembl RGD
PMID:17207476
GO_REF:0000107 MGI:3701419
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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Kirrel3
kirre like nephrin family adhesion molecule 3
acts_upstream_of_or_within
ISO
(MGI:4949565|PMID:21241806)
RGD
PMID:21241806
MGI:4949565
NCBI chr 8:32,865,779...33,407,555
Ensembl chr 8:32,862,776...33,405,676
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Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
MGI:1856965|MGI:3510641 (MGI:3654566|PMID:16819976), (MGI:3689277|PMID:16956587)
RGD
PMID:16819976 PMID:16956587
MGI:3654566 MGI:3689277
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
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Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:12605461
RGD:12790706
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284754|PMID:19107796)
UniProt RGD
PMID:19107796
GO_REF:0000024 MGI:5284754
NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
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Foxp2
forkhead box P2
involved_in
ISO
(PMID:11872605)
RGD
PMID:11872605
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
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Phox2b
paired-like homeobox 2b
involved_in
ISO
(MGI:4418003|PMID:19940179)
RGD
PMID:19940179
MGI:4418003
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
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Actb
actin, beta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
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Atp5pb
ATP synthase peripheral stalk-membrane subunit b
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418
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Atp5pf
ATP synthase peripheral stalk subunit F6
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr11:23,881,594...23,889,581
Ensembl chr11:23,881,592...23,889,119
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Basp1
brain abundant, membrane attached signal protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043
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Calm1
calmodulin 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
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Calm2
calmodulin 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
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Calm3
calmodulin 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
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Ccdc14
coiled-coil domain containing 14
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr11:66,052,063...66,087,915
Ensembl chr11:66,052,620...66,087,956
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Cdc42
cell division cycle 42
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
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Ckb
creatine kinase B
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315
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Cnp
2',3'-cyclic nucleotide 3' phosphodiesterase
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720
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Cox6b1
cytochrome c oxidase subunit 6B1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:85,875,080...85,884,081
Ensembl chr 1:85,875,109...85,884,001
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Dynll1
dynein light chain LC8-type 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:41,312,367...41,314,742
Ensembl chr12:41,312,367...41,314,741
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Eno3
enolase 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:55,370,531...55,375,921
Ensembl chr10:55,366,975...55,375,921
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Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
MGI:1857458 (MGI:3696489|PMID:17234579)
RGD
PMID:17234579
MGI:3696489
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Fgf9
fibroblast growth factor 9
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
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Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:1931521 (MGI:3696489|PMID:17234579)
RGD
PMID:17234579
MGI:3696489
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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G6pd
glucose-6-phosphate dehydrogenase
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:152,201,081...152,220,863
Ensembl chr X:152,201,098...152,220,801
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Glud1
glutamate dehydrogenase 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
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Gnb4
G protein subunit beta 4
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:115,360,746...115,400,680
Ensembl chr 2:115,364,918...115,400,579
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Hspa5
heat shock protein family A (Hsp70) member 5
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
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Ina
internexin neuronal intermediate filament protein, alpha
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:245,896,775...245,908,330
Ensembl chr 1:245,896,775...245,908,330
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Ldha
lactate dehydrogenase A
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:97,371,823...97,381,247
Ensembl chr 1:97,366,021...97,433,472
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Mag
myelin-associated glycoprotein
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
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Maob
monoamine oxidase B
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:5,907,327...6,010,996
Ensembl chr X:5,907,266...6,011,003
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Mapkap1
MAPK associated protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:17,715,813...17,918,387
Ensembl chr 3:17,715,834...17,918,384
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Mbp
myelin basic protein
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404
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Ndrg2
NDRG family member 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr15:24,600,981...24,609,621
Ensembl chr15:24,600,982...24,609,626
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Ndufs3
NADH:ubiquinone oxidoreductase core subunit S3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:76,876,646...76,883,824
Ensembl chr 3:76,876,646...76,883,824
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Padi2
peptidyl arginine deiminase 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 5:153,209,053...153,251,632
Ensembl chr 5:153,209,053...153,251,632
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Plp1
proteolipid protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:100,184,039...100,201,035
Ensembl chr X:100,185,767...100,201,032
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Rad1
RAD1 checkpoint DNA exonuclease
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689
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Rhoa
ras homolog family member A
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
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S100a1
S100 calcium binding protein A1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:175,993,922...175,998,765
Ensembl chr 2:175,993,922...175,999,544
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Sec16a
SEC16 homolog A, endoplasmic reticulum export factor
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
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Sirt2
sirtuin 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
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Suds3
SDS3 homolog, SIN3A corepressor complex component
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628
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Syngr3
synaptogyrin 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:13,710,553...13,715,312
Ensembl chr10:13,704,998...13,715,669
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Sypl2
synaptophysin-like 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:195,849,062...195,863,794
Ensembl chr 2:195,849,062...195,863,794
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Ttbk1
tau tubulin kinase 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:14,493,166...14,538,372
Ensembl chr 9:14,493,389...14,535,774
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Uchl1
ubiquitin C-terminal hydrolase L1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr14:41,485,033...41,495,590
Ensembl chr14:41,485,031...41,495,590
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Ywhae
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589
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Ywhah
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr14:77,696,332...77,705,715
Ensembl chr14:77,696,333...77,705,741
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Ywhaq
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:40,935,714...40,966,240
Ensembl chr 6:40,935,949...40,966,273
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Zfp148
zinc finger protein 148
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772
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Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857846 (MGI:3790896|PMID:18206388)
RGD
PMID:18206388
MGI:3790896
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:1330828 (MGI:2149271|PMID:11517264)
RGD
PMID:11517264
MGI:2149271
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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Cdk5r2
cyclin-dependent kinase 5 regulatory subunit 2
acts_upstream_of_or_within
ISO
MGI:101764 (MGI:2149271|PMID:11517264)
RGD
PMID:11517264
MGI:2149271
NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
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Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (MGI:3621705|PMID:12885554)
RGD
PMID:12885554
MGI:3621705
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Cacna1a
calcium voltage-gated channel subunit alpha1 A
acts_upstream_of_or_within
ISO
MGI:1856210 (MGI:77774|PMID:8719615)
RGD
PMID:8719615
MGI:77774
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
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Kcne1
potassium voltage-gated channel subfamily E regulatory subunit 1
involved_in
ISO
MGI:1857442 (MGI:3625254|PMID:11223304)
RGD
PMID:11223304
MGI:3625254
NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
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