ONTOLOGY REPORT - ANNOTATIONS
Term: neural nucleus development
Accession: GO:0048857
browse the term
Definition: The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.
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Hoxb2
homeobox B2
acts_upstream_of_or_within
ISO
MGI:2151772 (MGI:85074|PMID:9012503)
RGD
PMID:9012503
MGI:85074
NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688
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Foxp2
forkhead box P2
involved_in
ISO
(PMID:11872605)
RGD
PMID:11872605
NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
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Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857134 (MGI:1891561|PMID:11027399)
Ensembl RGD
PMID:11027399
GO_REF:0000107 MGI:1891561
NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
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Scrib
scribble planar cell polarity protein
acts_upstream_of_or_within
ISO
MGI:2139764 (MGI:4439427|PMID:20215345)
RGD
PMID:20215345
MGI:4439427
NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
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Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345)
RGD
PMID:20215345
MGI:4439427
NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
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Slc4a7
solute carrier family 4 member 7
acts_upstream_of_or_within
ISO
MGI:2682641 (MGI:2680888|PMID:12808454)
RGD
PMID:12808454
MGI:2680888
NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
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Hoxa1
homeobox A1
acts_upstream_of_or_within
ISO
MGI:1857504 (MGI:62658|PMID:8102800)
RGD
PMID:8102800
MGI:62658
NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
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Hoxb1
homeo box B1
acts_upstream_of_or_within
ISO
MGI:1857824 (MGI:83677|PMID:8898234)
RGD
PMID:8898234
MGI:83677
NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687
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Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (MGI:3709215|PMID:17460091)
Ensembl RGD
PMID:17460091
GO_REF:0000107 MGI:3709215
NCBI chr X:62,363,757...62,376,139
Ensembl chr X:62,363,757...62,376,143
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Kcnc1
potassium voltage-gated channel subfamily C member 1
IEP
RGD
PMID:10482766
RGD:9685780
NCBI chr 1:102,414,352...102,456,718
Ensembl chr 1:102,414,625...102,456,411
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Kcnc2
potassium voltage-gated channel subfamily C member 2
IEP
RGD
PMID:10482766
RGD:9685780
NCBI chr 7:54,978,453...55,159,362
Ensembl chr 7:54,980,120...55,159,351
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Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3653645 (MGI:4437145|PMID:20181579) (PMID:11854319)
Ensembl RGD
PMID:11854319 PMID:20181579
GO_REF:0000107 MGI:4437145
NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
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Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:2158714 (MGI:3721829|PMID:12097474)
RGD
PMID:12097474
MGI:3721829
NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
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Phox2a
paired-like homeobox 2a
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180328|MGI:4438118 (MGI:4849589|PMID:21068058), (MGI:86465|PMID:9115735)
Ensembl RGD
PMID:9115735 PMID:21068058
GO_REF:0000107 MGI:4849589 MGI:86465
NCBI chr 1:166,893,734...166,898,252
Ensembl chr 1:166,893,734...166,898,252
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3512079 (MGI:3701419|PMID:17207476)
Ensembl RGD
PMID:17207476
GO_REF:0000107 MGI:3701419
NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
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Kirrel3
kirre like nephrin family adhesion molecule 3
acts_upstream_of_or_within
ISO
(MGI:4949565|PMID:21241806)
RGD
PMID:21241806
MGI:4949565
NCBI chr 8:35,692,525...36,254,755
Ensembl chr 8:36,125,999...36,254,753
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Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:12605461
RGD:12790706
NCBI chr X:156,650,389...156,713,813
Ensembl chr X:156,655,960...156,705,233
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284754|PMID:19107796)
UniProt RGD
PMID:19107796
GO_REF:0000024 MGI:5284754
NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
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Foxp2
forkhead box P2
involved_in
ISO
(PMID:11872605)
RGD
PMID:11872605
NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
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Phox2b
paired-like homeobox 2b
involved_in
ISO
(MGI:4418003|PMID:19940179)
RGD
PMID:19940179
MGI:4418003
NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
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Actb
actin, beta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:13,715,843...13,718,813
Ensembl chr12:13,715,843...13,718,841
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Atp5pb
ATP synthase peripheral stalk-membrane subunit b
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:208,566,385...208,577,147
Ensembl chr 2:208,566,385...208,577,146 Ensembl chr 2:208,566,385...208,577,146
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Atp5pf
ATP synthase peripheral stalk subunit F6
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr11:24,286,806...24,294,419
Ensembl chr11:24,286,787...24,294,179
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Basp1
brain abundant, membrane attached signal protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:77,586,424...77,632,626
Ensembl chr 2:77,586,424...77,632,628
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Calm1
calmodulin 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:124,217,241...124,225,292
Ensembl chr 6:124,217,241...124,225,292
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Calm2
calmodulin 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:11,067,675...11,080,078
Ensembl chr15:65,506,874...65,507,968
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Calm3
calmodulin 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:78,844,520...78,851,628
Ensembl chr 1:78,843,080...78,851,719
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Ccdc14
coiled-coil domain containing 14
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr11:69,281,000...69,316,897
Ensembl chr11:69,281,554...69,316,848
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Cdc42
cell division cycle 42
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
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Ckb
creatine kinase B
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:136,142,956...136,145,838
Ensembl chr 6:136,142,956...136,145,837
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Cnp
2',3'-cyclic nucleotide 3' phosphodiesterase
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:88,490,798...88,497,357
Ensembl chr10:88,490,798...88,497,356
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Cox6b1
cytochrome c oxidase subunit 6B1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:89,075,987...89,084,834
Ensembl chr 1:89,075,975...89,084,859 Ensembl chr 2:89,075,975...89,084,859
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Dynll1
dynein light chain LC8-type 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:47,074,200...47,076,573
Ensembl chr12:47,074,200...47,076,572
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Eno3
enolase 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:57,278,271...57,283,661
Ensembl chr10:57,278,307...57,283,653
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Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
MGI:1857458 (MGI:3696489|PMID:17234579)
RGD
PMID:17234579
MGI:3696489
NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
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Fgf9
fibroblast growth factor 9
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
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Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:1931521 (MGI:3696489|PMID:17234579)
RGD
PMID:17234579
MGI:3696489
NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
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G6pd
glucose-6-phosphate dehydrogenase
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:156,274,800...156,293,935
Ensembl chr X:156,274,800...156,293,926
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Glud1
glutamate dehydrogenase 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557
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Gnb4
G protein subunit beta 4
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:118,978,965...119,007,877
Ensembl chr 2:118,978,973...119,007,835
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Hspa5
heat shock protein family A (Hsp70) member 5
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
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Ina
internexin neuronal intermediate filament protein, alpha
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:266,782,835...266,794,389
Ensembl chr 1:266,781,617...266,794,431
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Ldha
lactate dehydrogenase A
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:102,900,288...102,909,713
Ensembl chr 1:102,900,286...102,909,707
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Mag
myelin-associated glycoprotein
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:89,345,325...89,360,905
Ensembl chr 1:89,345,429...89,360,733
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Maob
monoamine oxidase B
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:6,430,694...6,533,520
Ensembl chr X:6,430,594...6,533,534
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Mapkap1
MAPK associated protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:13,484,952...13,701,772
Ensembl chr 3:13,484,838...13,701,757
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Mbp
myelin basic protein
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr18:79,326,738...79,437,310
Ensembl chr18:79,326,738...79,437,310
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Ndrg2
NDRG family member 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr15:28,305,820...28,314,459
Ensembl chr15:28,305,821...28,314,459
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Ndufs3
NADH:ubiquinone oxidoreductase core subunit S3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:79,721,686...79,728,863
Ensembl chr 3:79,721,694...79,728,879
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Padi2
peptidyl arginine deiminase 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 5:159,428,479...159,471,113
Ensembl chr 5:159,428,515...159,471,144
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Plp1
proteolipid protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:107,494,326...107,511,355
Ensembl chr X:107,496,072...107,511,348
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Rad1
RAD1 checkpoint DNA exonuclease
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:60,461,513...60,469,646
Ensembl chr 2:60,461,551...60,469,685
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Rhoa
ras homolog family member A
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
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S100a1
S100 calcium binding protein A1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:189,900,505...189,905,348
Ensembl chr 2:189,900,667...189,903,219
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Sec16a
SEC16 homolog A, endoplasmic reticulum export factor
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:3,856,218...3,890,785
Ensembl chr 3:3,856,218...3,890,758
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Sirt2
sirtuin 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
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Suds3
SDS3 homolog, SIN3A corepressor complex component
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:45,199,012...45,221,507
Ensembl chr12:45,199,577...45,221,512
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Syngr3
synaptogyrin 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:14,051,413...14,056,169
Ensembl chr10:14,051,415...14,056,169
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Sypl2
synaptophysin-like 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:211,003,046...211,017,778
Ensembl chr 2:211,003,046...211,017,778
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Ttbk1
tau tubulin kinase 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:16,862,305...16,899,399
Ensembl chr 9:16,862,248...16,902,199
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Ywhae
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:63,884,338...63,921,709
Ensembl chr10:63,884,338...63,921,709
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Ywhah
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr14:83,053,041...83,062,424
Ensembl chr14:83,053,041...83,062,424
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Ywhaq
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:43,463,294...43,493,816
Ensembl chr 6:43,463,294...43,493,816
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Zfp148
zinc finger protein 148
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr11:70,509,909...70,618,422
Ensembl chr11:70,514,750...70,618,347
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Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857846 (MGI:3790896|PMID:18206388)
RGD
PMID:18206388
MGI:3790896
NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
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Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:1330828 (MGI:2149271|PMID:11517264)
RGD
PMID:11517264
MGI:2149271
NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
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Cdk5r2
cyclin-dependent kinase 5 regulatory subunit 2
acts_upstream_of_or_within
ISO
MGI:101764 (MGI:2149271|PMID:11517264)
RGD
PMID:11517264
MGI:2149271
NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527
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Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (MGI:3621705|PMID:12885554)
RGD
PMID:12885554
MGI:3621705
NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
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Cacna1a
calcium voltage-gated channel subunit alpha1 A
acts_upstream_of_or_within
ISO
MGI:1856210 (MGI:77774|PMID:8719615)
RGD
PMID:8719615
MGI:77774
NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
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Kcne1
potassium voltage-gated channel subfamily E regulatory subunit 1
involved_in
ISO
MGI:1857442 (MGI:3625254|PMID:11223304)
RGD
PMID:11223304
MGI:3625254
NCBI chr11:32,498,260...32,511,202
Ensembl chr11:32,498,261...32,508,420
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all