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ONTOLOGY REPORT - ANNOTATIONS

Term:diencephalon morphogenesis
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Accession:GO:0048852 term browser browse the term
Definition:The process in which the anatomical structures of the diencephalon are generated and organized. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.

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diencephalon morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chrNW_004955424:21,140,038...21,147,268
Ensembl chrNW_004955424:21,140,038...21,146,694 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934 		JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chrNW_004955409:8,270,657...8,288,201
Ensembl chrNW_004955409:8,271,164...8,287,096 		JBrowse link
hypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:15037319) MGI PMID:15037319 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12321
    developmental process 5848
      anatomical structure morphogenesis 2556
        diencephalon morphogenesis 5
          hypophysis morphogenesis + 2
Path 2
Term Annotations click to browse term
  biological_process 12321
    developmental process 5848
      anatomical structure development 5535
        multicellular organism development 4546
          system development 3948
            nervous system development 2459
              central nervous system development 1090
                brain development 829
                  forebrain development 529
                    forebrain morphogenesis 16
                      diencephalon morphogenesis 5
                        hypophysis morphogenesis + 2
paths to the root