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ONTOLOGY REPORT - ANNOTATIONS


Term:inner ear development
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Accession:GO:0048839 term browser browse the term
Definition:The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure.



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inner ear development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within ISO MGI:3046273 (MGI:3629345|PMID:16775142) RGD PMID:16775142 MGI:3629345 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B acts_upstream_of_or_within ISO MGI:5003050 (MGI:5003056|PMID:21636789) RGD PMID:21636789 MGI:5003056 NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3767172 (MGI:4939574|PMID:21146598) RGD PMID:21146598 MGI:4939574 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO MGI:1857136 (MGI:74182|PMID:7605630) RGD PMID:7605630 MGI:74182 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmper BMP-binding endothelial regulator acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 8:21,732,225...21,977,261
Ensembl chr 8:21,732,225...21,977,256
JBrowse link
G C1qb complement C1q B chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 5:149,118,843...149,124,394
Ensembl chr 5:149,118,846...149,124,407
JBrowse link
G C1qtnf5 C1q and TNF related 5 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 8:44,450,934...44,453,075
Ensembl chr 8:44,451,154...44,453,074
JBrowse link
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116
JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856228|MGI:1856681|MGI:3028349 (MGI:3027690|PMID:14759567), (MGI:61338|PMID:13336002), (MGI:81497|PMID:8790740) RGD PMID:8790740 PMID:13336002 PMID:14759567 MGI:3027690 MGI:61338 MGI:79257 MGI:81497 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B acts_upstream_of_or_within ISO MGI:1857146 (MGI:1332249|PMID:10079221) RGD PMID:10079221 MGI:1332249 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO (MGI:1334159|PMID:10100048) RGD PMID:10100048 MGI:1334159 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Cxcl14 C-X-C motif chemokine ligand 14 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr17:8,317,933...8,325,956
Ensembl chr17:8,317,933...8,324,839
JBrowse link
G Cys1 cystin 1 acts_upstream_of_or_within ISO MGI:1856831 (MGI:49533|PMID:1952600) RGD PMID:1952600 MGI:49533 NCBI chr 6:41,300,836...41,318,071
Ensembl chr 6:41,300,836...41,318,071
JBrowse link
G Cytl1 cytokine like 1 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr14:73,053,876...73,058,886
Ensembl chr14:73,053,877...73,058,886
JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:3044907 (MGI:3621102|PMID:16495313) RGD PMID:16495313 MGI:3621102 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Duox2 dual oxidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3712359 (MGI:3712355|PMID:17440044)
Ensembl
RGD
PMID:17440044 GO_REF:0000107 MGI:3712355 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
JBrowse link
G Esrrb estrogen-related receptor beta involved_in ISS
ISO
GO_REF:0000024
(MGI:3722975|PMID:17765677)
UniProt
RGD
PMID:17765677 GO_REF:0000024 MGI:3722975 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 IEP RGD PMID:11159937 RGD:1598918 NCBI chr 1:22,172,275...22,415,978
Ensembl chr 1:22,172,275...22,415,976
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:3695846|PMID:17117437) RGD PMID:17117437 MGI:3695846 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785
JBrowse link
G Gjb2 gap junction protein, beta 2 IEP RGD PMID:10570462 RGD:1599834 NCBI chr15:31,260,390...31,278,222
Ensembl chr15:31,260,357...31,278,177
JBrowse link
G Gjb6 gap junction protein, beta 6 IEP RGD PMID:10570462 RGD:1599834 NCBI chr15:31,284,562...31,295,010
Ensembl chr15:31,284,419...31,294,582
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:98297 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 acts_upstream_of_or_within ISO MGI:1856991 (MGI:61338|PMID:13336002) RGD PMID:13336002 MGI:61338 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Hpca hippocalcin acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr14:30,737,414...30,797,317
Ensembl chr14:30,737,164...30,797,314
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISO (MGI:3848573|PMID:19389353) RGD PMID:19389353 MGI:3848573 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1928449|PMID:11120752), (MGI:3056224|PMID:15498462)
UniProt
RGD
PMID:11120752 PMID:15498462 GO_REF:0000024 MGI:1928449 MGI:3056224 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 7:51,087,059...51,221,882
Ensembl chr 7:51,088,239...51,222,446
JBrowse link
G Lhx3 LIM homeobox 3 involved_in ISO (PMID:18407919) RGD PMID:18407919 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 7:42,586,704...42,742,609
Ensembl chr 7:42,586,719...42,730,550
JBrowse link
G LOC100909593 class II histocompatibility antigen, M alpha chain-like acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238
G Lrp10 LDL receptor related protein 10 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr15:27,921,105...27,927,507
Ensembl chr15:27,920,259...27,927,505
JBrowse link
G Maf MAF bZIP transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Mnda myeloid cell nuclear differentiation antigen acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201
JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO (MGI:3776221|PMID:16041630) RGD PMID:16041630 MGI:3776221 NCBI chr 6:25,221,668...25,236,241
Ensembl chr 6:25,222,896...25,236,244
JBrowse link
G Myo3a myosin IIIA acts_upstream_of_or_within ISO MGI:4849286 (MGI:4849846|PMID:21165622) RGD PMID:21165622 MGI:4849846 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO MGI:1856555 (MGI:1346380|PMID:10525338), (MGI:53523|PMID:5980120), (MGI:77423|PMID:7493015) RGD PMID:5980120 PMID:7493015 PMID:10525338 MGI:1346380 MGI:53523 MGI:77423 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:1860092|MGI:2155423 (MGI:1197790|PMID:9435277), (MGI:61338|PMID:13336002), (MGI:63018|PMID:14198707), (MGI:76086|PMID:6627025) RGD PMID:6627025 PMID:9435277 PMID:13336002 PMID:14198707 MGI:1197790 MGI:61338 MGI:63006 MGI:63018 MGI:76086 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1929186|PMID:11152640)
UniProt
RGD
PMID:11152640 GO_REF:0000024 MGI:1929186 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1855958|MGI:2151877|MGI:2183469 (MGI:1928787|PMID:10978835), (MGI:3574187|PMID:15811708) RGD PMID:10978835 PMID:15811708 MGI:1928787 MGI:3574187 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pdgfa platelet derived growth factor subunit A IEP RGD PMID:15267171 RGD:2292167 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEP RGD PMID:15267171 RGD:2292167 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta IEP RGD PMID:15267171 RGD:2292167 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1926861 (MGI:3621705|PMID:12885554) RGD PMID:12885554 MGI:3621705 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
G Plppr4 phospholipid phosphatase related 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302
JBrowse link
G Pou3f4 POU class 3 homeobox 4 acts_upstream_of_or_within ISO MGI:1856631|MGI:1857990 (MGI:1351526|PMID:10587581), (MGI:3656465|PMID:15655183) RGD PMID:10587581 PMID:15655183 MGI:1351526 MGI:3656465 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923
JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425 (MGI:1095801|PMID:9256502), (MGI:1277883|PMID:9735355) RGD PMID:9256502 PMID:9735355 MGI:1095801 MGI:1277883 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO MGI:2386336 (MGI:4437346|PMID:20186345) RGD PMID:20186345 MGI:4437346 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO (PMID:12058348) RGD PMID:12058348 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 involved_in ISO (MGI:5776284|PMID:27162350) RGD PMID:27162350 MGI:5776284 NCBI chr 5:114,744,311...115,088,155
Ensembl chr 5:114,744,304...115,088,155
JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 acts_upstream_of_or_within ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934261|MGI:95729 (MGI:3709667|PMID:17395647)
Ensembl
RGD
PMID:17395647 GO_REF:0000107 MGI:3709667 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:3848573|PMID:19389353) RGD PMID:19389353 MGI:3848573 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Slc25a27 solute carrier family 25, member 27 IEP RGD PMID:21397696 RGD:6482846 NCBI chr 9:17,306,898...17,333,942
Ensembl chr 9:17,307,023...17,332,731
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 IEP RGD PMID:16160858 RGD:1643220 NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049
JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO
IBA
(PMID:18407919)
PMID:21873635
RGD PMID:18407919 PMID:21873635 RGD:13792537 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP RGD PMID:11335086 RGD:2300061 NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
JBrowse link
G Stox1 storkhead box 1 involved_in ISO (MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:5635320 NCBI chr20:30,598,656...30,666,371
Ensembl chr20:30,598,168...30,666,939
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:16479080 RGD:2302094 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IEP
ISO
(MGI:894212|PMID:9217007) RGD PMID:9217007 PMID:16479080 MGI:894212, RGD:2302094 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IEP RGD PMID:16479080 RGD:2302094 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592
JBrowse link
anterior semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase acts_upstream_of_or_within ISO MGI:2671810 (MGI:5568671|PMID:24303013) RGD PMID:24303013 MGI:5568671 NCBI chr 7:121,335,042...121,340,308
Ensembl chr 7:121,335,042...121,340,308
JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within ISO MGI:3850171 (MGI:3849925|PMID:19414487) RGD PMID:19414487 MGI:3849925 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (MGI:3527944|PMID:15630379) RGD PMID:15630379 MGI:3527944 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
MGI:2680653 (MGI:5784951|PMID:26084842)
GO_REF:0000107
RGD
Ensembl
PMID:26084842 GO_REF:0000107 MGI:5784951 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in ISO (MGI:3799635|PMID:18794526) RGD PMID:18794526 MGI:3799635 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO MGI:4433578 (MGI:5565635|PMID:24334608) RGD PMID:24334608 MGI:5565635 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2682641 (MGI:2680888|PMID:12808454)
RGD PMID:12808454 PMID:21873635 MGI:2680888, RGD:13792537 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Tmc1 transmembrane channel-like 1 acts_upstream_of_or_within ISO MGI:5427097 (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 1:218,275,262...218,445,955
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISS
ISO
IEA
PMID:10080181
(MGI:1332721|PMID:10080181)
GO_REF:0000107
RGD
Ensembl
PMID:10080181 PMID:10080181 GO_REF:0000107 MGI:1332721, RGD:8553713 NCBI chr 6:131,983,056...132,005,359
Ensembl chr 6:131,983,056...132,005,818
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585|MGI:3046196 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3046196|MGI:3583755 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3611666|PMID:16407553) RGD PMID:16407553 MGI:3611666 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (MGI:1339217|PMID:10364557) RGD PMID:10364557 MGI:1339217 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within ISO MGI:4354110 (MGI:4353582|PMID:19363478) RGD PMID:19363478 MGI:4353582 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO MGI:5558098 (MGI:5544506|PMID:24302887) RGD PMID:24302887 MGI:5544506 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856228|MGI:1856681|MGI:1891428|MGI:2154548|MGI:2154549 (MGI:1929001|PMID:11138008), (MGI:1933915|PMID:11322776), (MGI:3526751|PMID:15537665), (MGI:3625226|PMID:12121736), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710), (MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
GO_REF:0000107
RGD
Ensembl
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO MGI:3663254 (MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:3663248 NCBI chr 9:16,710,980...16,813,427
Ensembl chr 9:16,710,980...16,813,427
JBrowse link
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3850171 (MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712)
Ensembl
RGD
PMID:19414487 PMID:19423712 GO_REF:0000107 MGI:3849925 MGI:4353469 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Clrn2 clarin 2 involved_in ISO (MGI:6810803|PMID:33496845) RGD PMID:33496845 MGI:6810803 NCBI chr14:65,656,550...65,666,193
Ensembl chr14:65,656,550...65,666,193
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO MGI:2139535|MGI:6281113|MGI:6281114 (MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:6278501 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO MGI:3055797|MGI:3718054 (MGI:3578102|PMID:15905332), (MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710) RGD PMID:15905332 PMID:17876667 PMID:23217710 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Myo3a myosin IIIA involved_in ISO MGI:2448580 (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB involved_in ISO MGI:2183924 (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422 (MGI:2156358|PMID:11753415), (MGI:3625226|PMID:12121736), (MGI:3686545|PMID:17050716) RGD PMID:11753415 PMID:12121736 PMID:17050716 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1855958|MGI:1856394|MGI:1856396|MGI:1890219|MGI:2151877|MGI:3505691 (MGI:1928787|PMID:10978835), (MGI:3526751|PMID:15537665), (MGI:3619110|PMID:11124469), (MGI:3654702|PMID:16887306), (MGI:5468200|PMID:23217710) RGD PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4433578 (MGI:5565635|PMID:24334608)
RGD PMID:24334608 PMID:21873635 MGI:5565635, RGD:13792537 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 acts_upstream_of_or_within ISO MGI:3526430 (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within
involved_in
ISO
ISS
MGI:1857872 (MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373)
GO_REF:0000024
RGD
UniProt
PMID:10464373 PMID:10466888 GO_REF:0000024 MGI:1344578 MGI:3700629 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Strc stereocilin acts_upstream_of_or_within
involved_in
ISO MGI:3818633 (MGI:3818235|PMID:18849963)
(MGI:5430850|PMID:21165971)
RGD PMID:18849963 PMID:21165971 MGI:3818235 MGI:5430850 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tprn taperin acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2685697 (MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417 PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO MGI:4881773 (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:4432119 (MGI:5796227|PMID:27117407)
GO_REF:0000107
RGD
Ensembl
PMID:27117407 PMID:21873635 GO_REF:0000107 MGI:5796227, RGD:13792537 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
cochlea development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 involved_in ISO (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Calb1 calbindin 1 IEP RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:19429027 RGD:10054469 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within
involved_in
ISO MGI:2389021|MGI:3841145 (MGI:5297632|PMID:21925491)
(MGI:6316556|PMID:30639848)
RGD PMID:21925491 PMID:30639848 MGI:5297632 MGI:6316556 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader acts_upstream_of_or_within ISO MGI:3574034 (MGI:4880797|PMID:21246654) RGD PMID:21246654 MGI:4880797 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451
JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO MGI:4867020 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 1:160,104,931...160,138,958
Ensembl chr 1:160,104,931...160,124,808
JBrowse link
G Epha4 Eph receptor A4 involved_in ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:3714212|PMID:17557302) RGD PMID:17557302 MGI:3714212 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 involved_in ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:108,268,728...108,381,670
Ensembl chr 1:108,268,776...108,380,917
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr10:26,936,592...27,156,141
Ensembl chr10:26,936,551...27,151,251
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Gata2 GATA binding protein 2 IEP RGD PMID:20006695 RGD:9479067 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:20006695 RGD:9479067 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1341884|MGI:2149672 (MGI:3794221|PMID:18302773)
Ensembl
RGD
PMID:18302773 GO_REF:0000107 MGI:3794221 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:104853|MGI:104876|MGI:2447620 (MGI:3794221|PMID:18302773) RGD PMID:18302773 MGI:3794221 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Ift27 intraflagellar transport 27 acts_upstream_of_or_within ISO MGI:4461616 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 7:109,738,622...109,754,416
Ensembl chr 7:109,738,622...109,754,416
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2135272 (MGI:3773480|PMID:18066062) RGD PMID:18066062 MGI:3773480 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:15094499 RGD:2316534 NCBI chr13:100,766,101...100,963,435
Ensembl chr13:100,766,113...100,963,435
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IEP RGD PMID:15094499 RGD:2316534 NCBI chr 6:25,761,487...25,799,153
Ensembl chr 6:25,763,228...25,799,153
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
MGI:1931858 (MGI:3641254|PMID:15891643)
GO_REF:0000107
RGD
Ensembl
PMID:15891643 GO_REF:0000107 MGI:3641254 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in ISO (PMID:26196677) RGD PMID:26196677 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
JBrowse link
G Musk muscle associated receptor tyrosine kinase IEP RGD PMID:18420419 RGD:2317082 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:10494076 RGD:2325650 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Ocm oncomodulin IEP RGD PMID:16120789 RGD:7175527 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:17828551 RGD:13208944 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
JBrowse link
G Otof otoferlin IEP RGD PMID:17229086 RGD:2316502 NCBI chr 6:25,928,018...26,024,631
Ensembl chr 6:25,928,055...26,024,631
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:1888378 (MGI:3694123|PMID:17167097) RGD PMID:17167097 MGI:3694123 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Pvalb parvalbumin IEP RGD PMID:16120789 RGD:7175527 NCBI chr 7:109,772,939...109,787,954
Ensembl chr 7:109,772,593...109,784,561
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:5449641|PMID:22927466) RGD PMID:22927466 MGI:5449641 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Slc17a8 solute carrier family 17 member 8 IEP RGD PMID:24064385 RGD:9999152 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
JBrowse link
G Slc26a5 solute carrier family 26 member 5 IEP RGD PMID:20006695 RGD:9479067 NCBI chr 4:13,210,260...13,249,289
Ensembl chr 4:13,210,260...13,249,289
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Sobp sine oculis binding protein homolog involved_in ISO (MGI:3801556|PMID:18579736) RGD PMID:18579736 MGI:3801556 NCBI chr20:46,482,265...46,661,452
Ensembl chr20:46,482,765...46,663,541
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:98715 (MGI:3773480|PMID:18066062) RGD PMID:18066062 MGI:3773480 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within ISO MGI:1915838 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613 (MGI:3589836|PMID:16116426) RGD PMID:16116426 MGI:3589836 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:108100|MGI:94941 (MGI:3589836|PMID:16116426), (MGI:3821448|PMID:19008950) RGD PMID:16116426 PMID:19008950 MGI:3589836 MGI:3821448 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within ISO MGI:106613|MGI:2135272 (MGI:3821448|PMID:19008950) RGD PMID:19008950 MGI:3821448 NCBI chr11:80,365,446...80,382,641
Ensembl chr11:80,366,117...80,382,462
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:1335261 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (MGI:3714704|PMID:17433286) RGD PMID:17433286 MGI:3714704 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 acts_upstream_of_or_within ISO MGI:2135272 (MGI:4819429|PMID:20643356) RGD PMID:20643356 MGI:4819429 NCBI chr 5:147,774,160...147,806,338
Ensembl chr 5:147,774,160...147,806,160
JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hpn hepsin involved_in ISS
ISO
GO_REF:0000024
(MGI:5306554|PMID:20683358)
UniProt
RGD
PMID:20683358 GO_REF:0000024 MGI:5306554 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
JBrowse link
G Myo3a myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857673 (MGI:3702803|PMID:16916509)
UniProtKB:Q00288 (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:3702803 MGI:4822275 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pou3f4 POU class 3 homeobox 4 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P70323 (MGI:5284768|PMID:18231833)
UniProt
RGD
PMID:18231833 GO_REF:0000024 MGI:5284768 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923
JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3640803 (MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:4830023 NCBI chr 9:14,352,155...14,418,494
Ensembl chr 9:14,351,202...14,418,494
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (MGI:2671031|PMID:12874121) RGD PMID:12874121 MGI:2671031 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2385468|MGI:3841145 (MGI:4454502|PMID:20346939)
UniProt
RGD
PMID:20346939 GO_REF:0000024 MGI:4454502 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136 (MGI:3765363|PMID:17825816)
UniProtKB:P62515 (MGI:5284768|PMID:18231833)
UniProt
RGD
PMID:17825816 PMID:18231833 GO_REF:0000024 MGI:3765363 MGI:5284768 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3044915 (MGI:3788971|PMID:18353863) RGD PMID:18353863 MGI:3788971 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592
JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 6:110,341,585...110,475,297
Ensembl chr 6:110,341,581...110,474,538
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 acts_upstream_of_or_within ISO (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 4:92,142,656...92,143,138 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:108100|MGI:1857642|MGI:1888513|MGI:2655333|MGI:98958 (MGI:3589836|PMID:16116426), (MGI:3714704|PMID:17433286), (MGI:3814781|PMID:18606138), (MGI:3821448|PMID:19008950), (MGI:4819429|PMID:20643356), (MGI:4837757|PMID:20940229) RGD PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 More... MGI:3589836 MGI:3714704 MGI:3814781 MGI:3821448 MGI:4819429 MGI:4837757 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617|MGI:2135272 (MGI:3714704|PMID:17433286) RGD PMID:17433286 MGI:3714704 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861230 (MGI:5294688|PMID:21980308)
Ensembl
RGD
PMID:21980308 GO_REF:0000107 MGI:5294688 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
JBrowse link
inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983|MGI:2155984 (MGI:2178088|PMID:11973280), (MGI:3525036|PMID:15543141)
(MGI:3833041|PMID:19154718)
RGD PMID:11973280 PMID:15543141 PMID:19154718 MGI:2178088 MGI:3525036 MGI:3833041 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:95524 (MGI:3714221|PMID:17555714)
GO_REF:0000107
RGD
Ensembl
PMID:17555714 GO_REF:0000107 MGI:3714221 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856228 (MGI:3625226|PMID:12121736) RGD PMID:12121736 MGI:3625226 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Clrn2 clarin 2 acts_upstream_of_or_within ISO MGI:5792002|MGI:6458758 (MGI:6376373|PMID:31448880) RGD PMID:31448880 MGI:6376373 NCBI chr14:65,656,550...65,666,193
Ensembl chr14:65,656,550...65,666,193
JBrowse link
G Cux1 cut-like homeobox 1 acts_upstream_of_or_within ISO MGI:2388352 (MGI:2149924|PMID:11544187) RGD PMID:11544187 MGI:2149924 NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866
JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of
involved_in
ISO
IEA
MGI:1932522|MGI:3044907 (MGI:3621102|PMID:16495313)
GO_REF:0000107
RGD
Ensembl
PMID:16495313 GO_REF:0000107 MGI:3621102 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:2429373|PMID:12417662)
GO_REF:0000107
RGD
Ensembl
PMID:12417662 GO_REF:0000107 MGI:2429373 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Fgf20 fibroblast growth factor 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3798124|PMID:18524904)
GO_REF:0000107
RGD
Ensembl
PMID:18524904 GO_REF:0000107 MGI:3798124 NCBI chr16:52,030,853...52,037,612
Ensembl chr16:52,010,194...52,038,204
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521|MGI:88180 (MGI:3695846|PMID:17117437), (MGI:3714212|PMID:17557302), (MGI:3714221|PMID:17555714)
MGI:1931521 (MGI:3695846|PMID:17117437)
RGD PMID:17117437 PMID:17555714 PMID:17557302 MGI:3695846 MGI:3714212 MGI:3714221 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO MGI:2449921 (MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:2429425 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 acts_upstream_of_or_within ISO MGI:2681910 (MGI:2680830|PMID:12405956) RGD PMID:12405956 MGI:2680830 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Gsdme gasdermin E acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3583715 (MGI:3583372|PMID:16023581)
GO_REF:0000107
RGD
Ensembl
PMID:16023581 GO_REF:0000107 MGI:3583372 NCBI chr 4:79,258,799...79,321,129
Ensembl chr 4:79,257,804...79,320,806
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of
involved_in
ISO
IEA
MGI:104876|MGI:1341800 (MGI:4949990|PMID:21300049)
GO_REF:0000107
RGD
Ensembl
PMID:21300049 GO_REF:0000107 MGI:4949990 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of
involved_in
ISO
IEA
MGI:104853|MGI:1341800 (MGI:4949990|PMID:21300049)
GO_REF:0000107
RGD
Ensembl
PMID:21300049 GO_REF:0000107 MGI:4949990 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Jag1 jagged canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
MGI:1932522|MGI:3623344 (MGI:3621102|PMID:16495313)
GO_REF:0000107
RGD
Ensembl
PMID:16495313 PMID:10887092 GO_REF:0000107 MGI:3621102, RGD:1582345 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3050114 (MGI:3052624|PMID:15328414), (MGI:3697555|PMID:17074442) RGD PMID:15328414 PMID:17074442 MGI:3052624 MGI:3697555 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Mcoln3 mucolipin TRP cation channel 3 acts_upstream_of_or_within ISO MGI:1856230 (MGI:2445676|PMID:12403827) RGD PMID:12403827 MGI:2445676 NCBI chr 2:234,966,010...235,043,047
Ensembl chr 2:234,966,010...235,043,047
JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1856555 (MGI:1346380|PMID:10525338), (MGI:53523|PMID:5980120), (MGI:77423|PMID:7493015)
RGD PMID:5980120 PMID:7493015 PMID:10525338 PMID:21873635 MGI:1346380 MGI:53523 MGI:77423, RGD:13792537 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422|MGI:3511858 (MGI:2156358|PMID:11753415), (MGI:3510503|PMID:15389316), (MGI:3625226|PMID:12121736) RGD PMID:11753415 PMID:12121736 PMID:15389316 MGI:2156358 MGI:3510503 MGI:3625226 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1856394 (MGI:3616414|PMID:16481439) RGD PMID:16481439 MGI:3616414 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pls3 plastin 3 IEP RGD PMID:12378542 RGD:731234 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891
JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425|MGI:2176270 (MGI:2451279|PMID:12585968), (MGI:80981|PMID:8637595) RGD PMID:8637595 PMID:12585968 MGI:2451279 MGI:80981 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2651858|MGI:2651859 (MGI:2675093|PMID:14519688)
RGD PMID:14519688 PMID:21873635 MGI:2675093, RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush2a usherin acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3702040 (MGI:3700725|PMID:17360538)
GO_REF:0000107
RGD
Ensembl
PMID:17360538 GO_REF:0000107 MGI:3700725 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:88141 (MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:3622851 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3043947 (MGI:5488831|PMID:23536097)
Ensembl
RGD
PMID:23536097 GO_REF:0000107 MGI:5488831 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983|MGI:2155984 (MGI:3525036|PMID:15543141), (MGI:3607238|PMID:16145671) RGD PMID:15543141 PMID:16145671 MGI:3525036 MGI:3607238 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in
NOT|involved_in
ISS
ISO
GO_REF:0000024
(MGI:2669353|PMID:12782355)
(PMID:19639346)
UniProt
RGD
PMID:12782355 PMID:19639346 GO_REF:0000024 MGI:2669353 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:107771 (MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:3622851 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856229|MGI:1856681|MGI:2665714 (MGI:3579755|PMID:15925194), (MGI:75953|PMID:7610888) RGD PMID:7610888 PMID:15925194 MGI:3579755 MGI:61210 MGI:75953 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:1862019|MGI:2668337 (MGI:2667273|PMID:12842012) RGD PMID:12842012 MGI:2667273 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15300250)
PMID:21873635
MGI:3511552 (MGI:3056111|PMID:15353999)
RGD PMID:15300250 PMID:15353999 PMID:21873635 MGI:3056111, RGD:13792537 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit acts_upstream_of_or_within ISO MGI:3774038 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr 1:156,487,279...156,494,277
Ensembl chr 1:156,487,279...156,491,476
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit acts_upstream_of_or_within ISO MGI:2158742 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr14:42,235,218...42,241,939
Ensembl chr14:42,235,226...42,242,192
JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (MGI:49531|PMID:1952599) RGD PMID:1952599 MGI:49531 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO MGI:1857275 (MGI:892501|PMID:9165353) RGD PMID:9165353 MGI:892501 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101927|MGI:2180474 (MGI:2384365|PMID:12142028), (MGI:3689133|PMID:16900517)
Ensembl
RGD
PMID:12142028 PMID:16900517 GO_REF:0000107 MGI:2384365 MGI:3689133 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926 (MGI:3689133|PMID:16900517) RGD PMID:16900517 MGI:3689133 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343
JBrowse link
G Efna2 ephrin A2 TAS RGD PMID:10792438 RGD:1300471 NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:1859095|PMID:10839360) RGD PMID:10839360 MGI:1859095 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803|MGI:2150426|MGI:97486 (MGI:1344210|PMID:10471511), (MGI:3577160|PMID:15817220), (MGI:3702803|PMID:16916509) RGD PMID:10471511 PMID:15817220 PMID:16916509 MGI:1344210 MGI:3577160 MGI:3702803 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1347464|MGI:1859647 (MGI:3654570|PMID:16691564), (MGI:3688470|PMID:11062007) RGD PMID:11062007 PMID:16691564 MGI:3654570 MGI:3688470 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1345138 (MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:3577817 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (MGI:3056034|PMID:15328018) RGD PMID:15328018 MGI:3056034 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2153351 (MGI:2386422|PMID:12194867) RGD PMID:12194867 MGI:2386422 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:2153190|PMID:10934262) RGD PMID:10934262 MGI:2153190 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1099809|MGI:2388671 (MGI:3654570|PMID:16691564) RGD PMID:16691564 MGI:3654570 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
JBrowse link
G Foxi1 forkhead box I1 acts_upstream_of_or_within ISO MGI:2448634 (MGI:2652196|PMID:12642503) RGD PMID:12642503 MGI:2652196 NCBI chr10:18,806,292...18,810,231
Ensembl chr10:18,806,308...18,810,231
JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:3823145 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:3616416 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:3616416 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (MGI:4821520|PMID:20652952) RGD PMID:20652952 MGI:4821520 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2153826|MGI:2181200 (MGI:1928163|PMID:11135239), (MGI:5013488|PMID:21553382) RGD PMID:11135239 PMID:21553382 MGI:1928163 MGI:5013488 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3578572|PMID:15829521), (MGI:3588904|PMID:15996652) RGD PMID:15829521 PMID:15996652 MGI:3578572 MGI:3588904 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO MGI:2449921 (MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:2429425 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO MGI:107160|MGI:2154542 (MGI:2154463|PMID:11748138), (MGI:3055237|PMID:15363417) RGD PMID:11748138 PMID:15363417 MGI:2154463 MGI:3055237 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771
JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:107159|MGI:1857577 (MGI:1197796|PMID:9435283), (MGI:3055237|PMID:15363417) RGD PMID:9435283 PMID:15363417 MGI:1197796 MGI:3055237 NCBI chr 1:186,313,237...186,315,201
Ensembl chr 1:186,313,063...186,315,201
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069 (MGI:3055618|PMID:15367676) RGD PMID:15367676 MGI:3055618 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923
JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO MGI:2181699 (MGI:1355040|PMID:10742111) RGD PMID:10742111 MGI:1355040 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
MGI:2680653 (MGI:1931646|PMID:11226272)
GO_REF:0000107
RGD
Ensembl
PMID:11226272 GO_REF:0000107 MGI:1931646 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3618993 (MGI:3617033|PMID:16437162)
Ensembl
RGD
PMID:16437162 GO_REF:0000107 MGI:3617033 NCBI chr 5:134,275,145...134,326,992
Ensembl chr 5:134,275,934...134,326,932
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (MGI:3611672|PMID:16325169) RGD PMID:16325169 MGI:3611672 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
JBrowse link
G Myo15a myosin XVA acts_upstream_of_or_within ISO MGI:1857036 (MGI:3041655|PMID:14724386), (MGI:3054106|PMID:11718241) RGD PMID:11718241 PMID:14724386 MGI:3041655 MGI:3054106 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340
JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1856555 (MGI:77423|PMID:7493015)
RGD PMID:7493015 PMID:21873635 MGI:77423, RGD:13792537 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:1860092|MGI:2155422|MGI:3511858 (MGI:2156358|PMID:11753415), (MGI:3510503|PMID:15389316), (MGI:53596|PMID:5795329) RGD PMID:5795329 PMID:11753415 PMID:15389316 MGI:2156358 MGI:3510503 MGI:53596 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Neurog1 neurogenin 1 involved_in
acts_upstream_of_or_within
ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067)
MGI:2183171 (MGI:3607238|PMID:16145671)
RGD PMID:16145671 PMID:23419067 MGI:3607238 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:2157256 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Ntn1 netrin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137018 (MGI:3718276|PMID:17616930)
Ensembl
RGD
PMID:17616930 GO_REF:0000107 MGI:3718276 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Otop1 otopetrin 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1856638|MGI:2655558 (MGI:2654297|PMID:12651873)
PMID:21873635
RGD PMID:12651873 PMID:21873635 MGI:2654297, RGD:13792537 NCBI chr14:72,505,036...72,532,497
Ensembl chr14:72,503,592...72,532,497
JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO MGI:2136272|MGI:97451 (MGI:1335816|PMID:10225993) RGD PMID:10225993 MGI:1335816 NCBI chr14:96,082,151...96,089,161
Ensembl chr14:96,082,151...96,089,086
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (MGI:1335816|PMID:10225993) RGD PMID:10225993 MGI:1335816 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
UniProtKB:Q00288 (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)
MGI:109344|MGI:1857673 (MGI:3052393|PMID:15242798), (MGI:3702803|PMID:16916509)
UniProt
RGD
PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:3052393 MGI:3702803 MGI:4822275 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISO UniProtKB:P32114 (MGI:4822275|PMID:20727173) RGD PMID:20727173 MGI:4822275 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425 (MGI:2451279|PMID:12585968) RGD PMID:12585968 MGI:2451279 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:98218 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866
JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr 3:14,132,511...14,168,535
Ensembl chr 3:14,094,004...14,168,535
JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q acts_upstream_of_or_within ISO MGI:2679316 (MGI:2677560|PMID:14534255) RGD PMID:14534255 MGI:2677560 NCBI chr 7:42,837,109...43,016,917
Ensembl chr 7:42,837,109...43,016,917
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Sobp sine oculis binding protein homolog acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1856614 (MGI:3664354|PMID:16962269)
PMID:21873635
RGD PMID:16962269 PMID:21873635 MGI:3664354, RGD:13792537 NCBI chr20:46,482,265...46,661,452
Ensembl chr20:46,482,765...46,663,541
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO MGI:3578633|MGI:99604 (MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:3577817 NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136|MGI:2179190|MGI:2179191|MGI:3046196|MGI:3619149 (MGI:2671642|PMID:12913075), (MGI:3039048|PMID:15084464), (MGI:3530686|PMID:15652707), (MGI:3629255|PMID:16600992)
UniProt
RGD
PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 GO_REF:0000024 MGI:2671642 MGI:3039048 MGI:3530686 MGI:3629255 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO UniProtKB:Q60707 (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:21204207)
UniProt
RGD
PMID:21204207 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592
JBrowse link
G Tmie transmembrane inner ear involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857053 (MGI:2183496|PMID:12140191)
RGD PMID:12140191 PMID:21873635 MGI:2183496, RGD:13792537 NCBI chr 8:110,849,713...110,864,803
Ensembl chr 8:110,850,034...110,864,803
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2651858|MGI:2651859 (MGI:2675093|PMID:14519688)
RGD PMID:14519688 PMID:21873635 MGI:2675093, RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within ISO MGI:2450561 (MGI:2450572|PMID:12588793), (MGI:49706|PMID:1927362) RGD PMID:1927362 PMID:12588793 MGI:2450572 MGI:49706 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:98956 (MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:3582112 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:98953 (MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:3582112 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:3823145 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
inner ear receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8b1 ATPase phospholipid transporting 8B1 involved_in ISO (MGI:3849653|PMID:19478059) RGD PMID:19478059 MGI:3849653 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (MGI:3844748|PMID:19416898) RGD PMID:19416898 MGI:3844748 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 involved_in ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:108,268,728...108,381,670
Ensembl chr 1:108,268,776...108,380,917
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr10:26,936,592...27,156,141
Ensembl chr10:26,936,551...27,151,251
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 involved_in ISO (MGI:3512691|PMID:11276175) RGD PMID:11276175 MGI:3512691 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO MGI:1856914 (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 6:110,341,585...110,475,297
Ensembl chr 6:110,341,581...110,474,538
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 acts_upstream_of_or_within ISO MGI:1856914 (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 4:92,142,656...92,143,138 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1888513 (MGI:4837757|PMID:20940229) RGD PMID:20940229 MGI:4837757 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
inner ear receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:95524 (MGI:3714221|PMID:17555714) RGD PMID:17555714 MGI:3714221 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Fgf20 fibroblast growth factor 20 acts_upstream_of_or_within ISO (MGI:3798124|PMID:18524904) RGD PMID:18524904 MGI:3798124 NCBI chr16:52,030,853...52,037,612
Ensembl chr16:52,010,194...52,038,204
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521|MGI:88180 (MGI:3695846|PMID:17117437), (MGI:3714221|PMID:17555714) RGD PMID:17117437 PMID:17555714 MGI:3695846 MGI:3714221 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Gsdme gasdermin E acts_upstream_of_or_within ISO MGI:3583715 (MGI:3583372|PMID:16023581) RGD PMID:16023581 MGI:3583372 NCBI chr 4:79,258,799...79,321,129
Ensembl chr 4:79,257,804...79,320,806
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:1860092|MGI:2155417|MGI:2155420|MGI:2155421|MGI:2155422|MGI:2155423 (MGI:1197790|PMID:9435277), (MGI:1289591|PMID:9680294) RGD PMID:9435277 PMID:9680294 MGI:1197790 MGI:1289591 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425 (MGI:1095801|PMID:9256502), (MGI:1277883|PMID:9735355) RGD PMID:9256502 PMID:9735355 MGI:1095801 MGI:1277883 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within ISO MGI:1856575|MGI:2450561 (MGI:2450572|PMID:12588793), (MGI:49706|PMID:1927362), (MGI:50720|PMID:1442008), (MGI:59980|PMID:1763621) RGD PMID:1442008 PMID:1763621 PMID:1927362 PMID:12588793 MGI:2450572 MGI:49706 MGI:50720 MGI:59980 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590
JBrowse link
G Ush2a usherin acts_upstream_of_or_within ISO MGI:3702040 (MGI:3700725|PMID:17360538) RGD PMID:17360538 MGI:3700725 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
inner ear receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within ISO MGI:3718538 (MGI:3718182|PMID:17295842)
MGI:3527179 (MGI:3714249|PMID:17567809)
RGD PMID:17295842 PMID:17567809 MGI:3714249 MGI:3718182 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein acts_upstream_of_or_within ISO MGI:3576051 (MGI:4867594|PMID:21071598) RGD PMID:21071598 MGI:4867594 NCBI chr 4:118,125,581...118,226,005
Ensembl chr 4:118,125,607...118,226,005
JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:2154548 (MGI:3794916|PMID:18339676) RGD PMID:18339676 MGI:3794916 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader acts_upstream_of_or_within ISO MGI:3574034|MGI:4829945 (MGI:4880797|PMID:21246654) RGD PMID:21246654 MGI:4880797 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within ISO MGI:1915838 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756
JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO MGI:3846573 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 2:121,928,188...122,056,711
Ensembl chr 2:121,927,942...122,056,707
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 involved_in IBA
ISO
PMID:21873635
(MGI:4421424|PMID:20137774)
RGD PMID:20137774 PMID:21873635 MGI:4421424, RGD:13792537 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO MGI:6281113|MGI:6281114 (MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:6278501 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104876|MGI:1341800 (MGI:4949990|PMID:21300049)
Ensembl
RGD
PMID:21300049 GO_REF:0000107 MGI:4949990 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853|MGI:1341800 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:104853|MGI:104876 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Ift27 intraflagellar transport 27 acts_upstream_of_or_within ISO MGI:4461616 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 7:109,738,622...109,754,416
Ensembl chr 7:109,738,622...109,754,416
JBrowse link
G Ift88 intraflagellar transport 88 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1932522|MGI:2135272|MGI:3710185 (MGI:3773480|PMID:18066062)
RGD PMID:18066062 PMID:21873635 MGI:3773480, RGD:13792537 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2386464 (MGI:3773480|PMID:18066062) RGD PMID:18066062 MGI:3773480 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4887578 (MGI:4868517|PMID:21045211)
Ensembl
RGD
PMID:21045211 GO_REF:0000107 MGI:4868517 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:2155422 (MGI:3794916|PMID:18339676) RGD PMID:18339676 MGI:3794916 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1856394 (MGI:3794916|PMID:18339676) RGD PMID:18339676 MGI:3794916 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:5056373 (MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:5050793 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sdc4 syndecan 4 acts_upstream_of_or_within ISO MGI:2135272 (MGI:5498591|PMID:23760952) RGD PMID:23760952 MGI:5498591 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within ISO MGI:3836913 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781
JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 6:110,341,585...110,475,297
Ensembl chr 6:110,341,581...110,474,538
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 acts_upstream_of_or_within ISO (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 4:92,142,656...92,143,138 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6416702|PMID:32127020)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:32127020 GO_REF:0000024 GO_REF:0000107 MGI:6416702 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3757683 (MGI:3794916|PMID:18339676)
RGD PMID:18339676 PMID:21873635 MGI:3794916, RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within ISO MGI:1856575 (MGI:3794916|PMID:18339676) RGD PMID:18339676 MGI:3794916 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1349164|MGI:1857642|MGI:98715 (MGI:3773480|PMID:18066062), (MGI:3814781|PMID:18606138), (MGI:5498591|PMID:23760952) RGD PMID:18066062 PMID:18606138 PMID:23760952 MGI:3773480 MGI:3814781 MGI:5498591 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Whrn whirlin involved_in ISS
ISO
GO_REF:0000024
(MGI:2182951|PMID:12124769), (MGI:3714804|PMID:17326148)
UniProt
RGD
PMID:12124769 PMID:17326148 GO_REF:0000024 MGI:2182951 MGI:3714804 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
lateral semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
negative regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1932522|MGI:3044907 (MGI:3621102|PMID:16495313)
Ensembl
RGD
PMID:16495313 GO_REF:0000107 MGI:3621102 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:3695846|PMID:17117437) RGD PMID:17117437 MGI:3695846 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104876|MGI:1341800|MGI:2149672 (MGI:1889857|PMID:11023859), (MGI:2136156|PMID:11425898), (MGI:4949990|PMID:21300049)
Ensembl
RGD
PMID:11023859 PMID:11425898 PMID:21300049 GO_REF:0000107 MGI:1889857 MGI:2136156 MGI:4949990 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853|MGI:1341800|MGI:2149674 (MGI:2136156|PMID:11425898), (MGI:4949990|PMID:21300049) RGD PMID:11425898 PMID:21300049 MGI:2136156 MGI:4949990 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585 (MGI:5617067|PMID:25535395) RGD PMID:25535395 MGI:5617067 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
negative regulation of inner ear receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in ISO (MGI:3625195|PMID:12208538) RGD PMID:12208538 MGI:3625195 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3625195|PMID:12208538) RGD PMID:12208538 MGI:3625195 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
otic vesicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)
UniProt
RGD
PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO (PMID:9119111) RGD PMID:9119111 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780 (MGI:5319720|PMID:22513373) RGD PMID:22513373 MGI:5319720 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2181200 (MGI:1928163|PMID:11135239) RGD PMID:11135239 MGI:1928163 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Get1 guided entry of tail-anchored proteins factor 1 acts_upstream_of_or_within ISO MGI:5911419|MGI:6117117 (MGI:5817553|PMID:27458190) RGD PMID:27458190 MGI:5817553 NCBI chr11:35,438,555...35,460,156
Ensembl chr11:35,445,815...35,459,973
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:15494458) RGD PMID:15494458 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:109344|MGI:2655195 (MGI:3702803|PMID:16916509), (MGI:5319720|PMID:22513373) RGD PMID:16916509 PMID:22513373 MGI:3702803 MGI:5319720 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:9119111) RGD PMID:9119111 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (MGI:2683889|PMID:14623822) RGD PMID:14623822 MGI:2683889 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809|MGI:99604 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:200,001,261...200,005,187
Ensembl chr 1:200,001,261...200,005,187
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:95517 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (MGI:1197797|PMID:9435295) RGD PMID:9435295 MGI:1197797 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (MGI:1206234|PMID:9620767) RGD PMID:9620767 MGI:1206234 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1932522|MGI:2385468 (MGI:3795349|PMID:18377888)
UniProt
RGD
PMID:18377888 GO_REF:0000024 MGI:3795349 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tcap titin-cap acts_upstream_of_or_within ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (MGI:3702803|PMID:16916509) RGD PMID:16916509 MGI:3702803 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO MGI:3046793 (MGI:3703494|PMID:17074316) RGD PMID:17074316 MGI:3703494 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
otolith development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3612279 (MGI:4829568|PMID:20577052)
Ensembl
RGD
PMID:20577052 GO_REF:0000107 MGI:4829568 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Nox3 NADPH oxidase 3 acts_upstream_of_or_within ISO MGI:1856606 (MGI:1351720|PMID:10491954) RGD PMID:10491954 MGI:1351720 NCBI chr 1:44,238,012...44,302,851
Ensembl chr 1:44,236,992...44,302,851
JBrowse link
otolith formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc44a4 solute carrier family 44, member 4 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:3,903,099...3,919,215
Ensembl chr20:3,903,099...3,919,215
JBrowse link
otolith mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Oc90 otoconin 90 involved_in ISO (MGI:5896790|PMID:21655225), (MGI:6189500|PMID:24748133) RGD PMID:21655225 PMID:24748133 MGI:5896790 MGI:6189500 NCBI chr 7:97,635,890...97,669,416
Ensembl chr 7:97,635,890...97,669,416
JBrowse link
G Otol1 otolin 1 involved_in ISO (MGI:5896790|PMID:21655225), (MGI:6189500|PMID:24748133), (MGI:6189669|PMID:29076638) RGD PMID:21655225 PMID:24748133 PMID:29076638 MGI:5896790 MGI:6189500 MGI:6189669 NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023
JBrowse link
otolith mineralization completed early in development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO (MGI:4829568|PMID:20577052) RGD PMID:20577052 MGI:4829568 NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 acts_upstream_of_or_within ISO MGI:1856106 (MGI:53623|PMID:5367369) RGD PMID:5367369 MGI:53623 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251
JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 acts_upstream_of_or_within ISO MGI:2443955 (MGI:5519140|PMID:24086156) RGD PMID:24086156 MGI:5519140 NCBI chr 4:127,130,899...127,230,956
Ensembl chr 4:127,130,898...127,231,513
JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 acts_upstream_of_or_within ISO MGI:107935 (MGI:5519140|PMID:24086156) RGD PMID:24086156 MGI:5519140 NCBI chr 7:61,816,313...61,866,275
Ensembl chr 7:61,816,342...61,866,481
JBrowse link
G Tlr13 toll-like receptor 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:71,220,288...71,242,074
Ensembl chr  X:71,220,367...71,242,376
JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:3,768,802...3,887,932
Ensembl chr18:3,805,183...3,887,930
JBrowse link
positive regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:1889857|PMID:11023859), (MGI:3833041|PMID:19154718) RGD PMID:11023859 PMID:19154718 MGI:1889857 MGI:3833041 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2429373|PMID:12417662)
GO_REF:0000107
RGD
Ensembl
PMID:12417662 GO_REF:0000107 MGI:2429373 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
positive regulation of inner ear receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3625195|PMID:12208538)
MGI:3767172 (MGI:4939574|PMID:21146598)
RGD PMID:12208538 PMID:21146598 MGI:3625195 MGI:4939574 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 involved_in ISO (MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:5635320 NCBI chr20:30,598,656...30,666,371
Ensembl chr20:30,598,168...30,666,939
JBrowse link
regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:104853|MGI:104876 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:104654 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Mycl MYCL proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:97357 (MGI:5468771|PMID:23022312) RGD PMID:23022312 MGI:5468771 NCBI chr 5:135,274,713...135,281,584
Ensembl chr 5:135,274,748...135,281,582
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:96799 (MGI:5468771|PMID:23022312) RGD PMID:23022312 MGI:5468771 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585 (MGI:5617067|PMID:25535395) RGD PMID:25535395 MGI:5617067 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5915403|PMID:29107558)
UniProt
RGD
PMID:29107558 GO_REF:0000024 MGI:5915403 NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
JBrowse link
semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (MGI:4821520|PMID:20652952) RGD PMID:20652952 MGI:4821520 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3575490|PMID:15765517) RGD PMID:15765517 MGI:3575490 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:98493 (MGI:4397600|PMID:19855134) RGD PMID:19855134 MGI:4397600 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:1335261 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:200,001,261...200,005,187
Ensembl chr 1:200,001,261...200,005,187
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:2157256 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2444748 (MGI:4397600|PMID:19855134)
UniProt
RGD
PMID:19855134 GO_REF:0000024 MGI:4397600 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861230 (MGI:5294688|PMID:21980308)
Ensembl
RGD
PMID:21980308 GO_REF:0000107 MGI:5294688 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
JBrowse link
stereocilium maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clrn2 clarin 2 acts_upstream_of_or_within
involved_in
ISO MGI:5792002|MGI:6458758 (MGI:6376373|PMID:31448880)
(MGI:6810803|PMID:33496845)
RGD PMID:31448880 PMID:33496845 MGI:6376373 MGI:6810803 NCBI chr14:65,656,550...65,666,193
Ensembl chr14:65,656,550...65,666,193
JBrowse link
G Pjvk pejvakin acts_upstream_of_or_within ISO MGI:5014098|MGI:5925280 (MGI:5887150|PMID:28209736) RGD PMID:28209736 MGI:5887150 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
G Tprn taperin involved_in ISO
IBA
MGI:5897817 (MGI:5887167|PMID:27693694)
PMID:21873635
RGD PMID:27693694 PMID:21873635 MGI:5887167, RGD:13792537 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
vestibular receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 involved_in ISO (MGI:3512691|PMID:11276175) RGD PMID:11276175 MGI:3512691 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase, receptor type, Q involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679316 (MGI:5315778|PMID:22357859)
Ensembl
RGD
PMID:22357859 GO_REF:0000107 MGI:5315778 NCBI chr 7:42,837,109...43,016,917
Ensembl chr 7:42,837,109...43,016,917
JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    developmental process 6897
      anatomical structure development 6372
        inner ear development 248
          cochlea development + 65
          inner ear morphogenesis + 123
          inner ear receptor cell differentiation + 89
          otic vesicle development + 16
          otolith development + 12
          semicircular canal development + 11
Path 2
Term Annotations click to browse term
  biological_process 18737
    developmental process 6897
      anatomical structure development 6372
        animal organ development 4165
          sensory organ development 710
            ear development 278
              inner ear development 248
                cochlea development + 65
                inner ear morphogenesis + 123
                inner ear receptor cell differentiation + 89
                otic vesicle development + 16
                otolith development + 12
                semicircular canal development + 11
paths to the root