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ONTOLOGY REPORT - ANNOTATIONS


Term:pronephros development
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Accession:GO:0048793 term browser browse the term
Definition:The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.
Synonyms:exact_synonym: pronephric kidney development


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pronephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in ISO (PMID:15355349) RGD PMID:15355349 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:7909549) RGD PMID:7909549 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
ISS
(PMID:21281489)
GO_REF:0000024
RGD
UniProt
PMID:21281489 GO_REF:0000024 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO (MGI:5009762|PMID:21281489) RGD PMID:21281489 MGI:5009762 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:2445273|PMID:12435636)
UniProt
RGD
PMID:12435636 GO_REF:0000024 MGI:2445273 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:2445273|PMID:12435636)
UniProt
RGD
PMID:12435636 GO_REF:0000024 MGI:2445273 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
pronephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO
ISS
(PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 involved_in ISO
ISS
(PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
pronephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5816639|PMID:27392076)
UniProt
RGD
PMID:27392076 GO_REF:0000024 MGI:5816639 NCBI chr 4:120,453,577...120,467,932
Ensembl chr 4:120,453,581...120,467,932
JBrowse link
pronephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in ISO UniProtKB:P29674|UniProtKB:Q9PUK5 (PMID:15355349) RGD PMID:15355349 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
pronephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)
UniProt
RGD
PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link
regulation of pronephros size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1a HNF1 homeobox A NOT
NOT|involved_in
ISO (PMID:15355349) RGD PMID:15355349 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B involved_in ISO (PMID:15355349) RGD PMID:15355349 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20078
    developmental process 6848
      anatomical structure development 6308
        animal organ development 4062
          kidney development 370
            pronephros development 9
              cell differentiation involved in pronephros development + 0
              cell proliferation involved in pronephros development 0
              cell-cell signaling involved in pronephros development 0
              glomus development 0
              head kidney development + 0
              nephrostome development 0
              pattern specification involved in pronephros development + 2
              pronephric duct development + 1
              pronephric nephron development + 3
              pronephric sinus development 0
              pronephros maturation + 0
              pronephros morphogenesis + 3
              rectal diverticulum development 0
Path 2
Term Annotations click to browse term
  biological_process 20078
    developmental process 6848
      anatomical structure development 6308
        multicellular organism development 5783
          system development 5311
            urogenital system development 434
              renal system development 384
                kidney development 370
                  pronephros development 9
                    cell differentiation involved in pronephros development + 0
                    cell proliferation involved in pronephros development 0
                    cell-cell signaling involved in pronephros development 0
                    glomus development 0
                    head kidney development + 0
                    nephrostome development 0
                    pattern specification involved in pronephros development + 2
                    pronephric duct development + 1
                    pronephric nephron development + 3
                    pronephric sinus development 0
                    pronephros maturation + 0
                    pronephros morphogenesis + 3
                    rectal diverticulum development 0
paths to the root