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ONTOLOGY REPORT - ANNOTATIONS


Term:tissue remodeling
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Accession:GO:0048771 term browser browse the term
Definition:The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling.


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tissue remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase TAS RGD PMID:16285961 RGD:1579881 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Cela1 chymotrypsin like elastase 1 IEA
ISO
GO_REF:0000107
(MGI:5641427|PMID:24793170)
Ensembl
RGD
PMID:24793170 GO_REF:0000107, MGI:5641427 NCBI chr 7:142,305,337...142,318,621
Ensembl chr 7:142,305,338...142,318,620
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:61,532,465...61,567,510
Ensembl chr 8:61,532,465...61,567,510
JBrowse link
G Gas6 growth arrest specific 6 TAS RGD PMID:16285961 RGD:1579881 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Il23a interleukin 23 subunit alpha IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:2,710,609...2,712,723
Ensembl chr 7:2,710,609...2,712,723
JBrowse link
G Lipa lipase A, lysosomal acid type ISO MGI:2451080 (MGI:3603471|PMID:14644759) RGD PMID:14644759 MGI:3603471 NCBI chr 1:252,816,536...252,959,348
Ensembl chr 1:252,816,527...252,849,904
JBrowse link
G Mir29a microRNA 29a ISO MGI:2676905|MGI:2676906|MGI:3619047 (MGI:3807359|PMID:18723672) RGD PMID:18723672 MGI:3807359 NCBI chr 4:58,343,931...58,344,018 JBrowse link
G Mir29b1 microRNA 29b-1 ISO MGI:2676904|MGI:2676906|MGI:3619047 (MGI:3807359|PMID:18723672) RGD PMID:18723672 MGI:3807359 NCBI chr 4:58,344,310...58,344,390
Ensembl chr 4:58,344,310...58,344,390
JBrowse link
G Mir29b2 microRNA 29b-2 ISO MGI:2676904|MGI:2676905|MGI:2676906 (MGI:3807359|PMID:18723672) RGD PMID:18723672 MGI:3807359 NCBI chr13:113,782,057...113,782,137
Ensembl chr13:113,782,057...113,782,140
JBrowse link
G Mmp14 matrix metallopeptidase 14 IDA RGD PMID:16740171 RGD:1582597 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp2 matrix metallopeptidase 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16740171, PMID:21873635 RGD:1582597, RGD:13792537 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp9 matrix metallopeptidase 9 IDA RGD PMID:16740171 RGD:1582597 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Plg plasminogen IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043, GO_REF:0000104 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Thbs4 thrombospondin 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
atrial ventricular junction remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 ISO MGI:95716 (MGI:3639795|PMID:10969038) RGD PMID:10969038 MGI:3639795 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gja5 gap junction protein, alpha 5 ISO MGI:2445238 (MGI:3639795|PMID:10969038) RGD PMID:10969038 MGI:3639795 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
blood vessel remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071838.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 8:133,195,288...133,197,177 JBrowse link
G Acvr2b activin A receptor type 2B IEA
ISO
GO_REF:0000107
(MGI:4436974|PMID:19903896)
Ensembl
RGD
PMID:19903896 GO_REF:0000107, MGI:4436974 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO (MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:4436974 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Adra1b adrenoceptor alpha 1B ISO MGI:2148638 (MGI:3527315|PMID:15231500) RGD PMID:15231500 MGI:3527315 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:1889403 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Atg5 autophagy related 5 IEA
ISO
GO_REF:0000107
MGI:3050453|MGI:3663625 (MGI:3711608|PMID:17450150)
Ensembl
RGD
PMID:17450150 GO_REF:0000107, MGI:3711608 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atp7a ATPase copper transporting alpha ISO MGI:3588774 (MGI:3616522|PMID:16338116) RGD PMID:16338116 MGI:3616522 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Axl Axl receptor tyrosine kinase ISO MGI:2387750 (MGI:3714893|PMID:16627783) RGD PMID:16627783 MGI:3714893 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Bak1 BCL2-antagonist/killer 1 ISO MGI:99702 (MGI:3692135|PMID:15955981) RGD PMID:15955981 MGI:3692135 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1097161 (MGI:3692135|PMID:15955981)
Ensembl
RGD
PMID:15955981 GO_REF:0000107, MGI:3692135 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bgn biglycan IEP RGD PMID:11728008 RGD:631310 NCBI chr  X:157,319,042...157,331,204
Ensembl chr  X:157,319,046...157,331,204
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:4436974 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cbs cystathionine beta synthase ISO MGI:1857139 (MGI:3625574|PMID:12433838) RGD PMID:12433838 MGI:3625574 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 IEP RGD PMID:15178559 RGD:1582349
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5608935|PMID:25147295) RGD PMID:25147295 MGI:5608935 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 IEP RGD PMID:16519896 RGD:1598504 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Cts8 cathepsin 8 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:3,385,851...3,397,621
Ensembl chr17:3,385,851...3,397,621
JBrowse link
G Dbh dopamine beta-hydroxylase IEA
ISO
GO_REF:0000107
MGI:1857556 (MGI:3527315|PMID:15231500), (MGI:3587974|PMID:15849236)
Ensembl
RGD
PMID:15231500, PMID:15849236 GO_REF:0000107, MGI:3527315, MGI:3587974 NCBI chr 3:5,709,236...5,731,895
Ensembl chr 3:5,709,236...5,731,898
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Eln elastin IDA RGD PMID:12844513 RGD:1580324 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEA
ISO
GO_REF:0000107
MGI:2386334 (MGI:1860986|PMID:10880563)
Ensembl
RGD
PMID:10880563 GO_REF:0000107, MGI:1860986 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:5907444|PMID:26295701) RGD PMID:26295701 MGI:5907444 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:98493|MGI:99604 (MGI:3690261|PMID:17000704) RGD PMID:17000704 MGI:3690261 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:1099809|MGI:98493 (MGI:3690261|PMID:17000704) RGD PMID:17000704 MGI:3690261 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Flna filamin A ISO (MGI:3699024|PMID:17172441) RGD PMID:17172441 MGI:3699024 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1347481 (MGI:2150572|PMID:11562355), (MGI:3701373|PMID:16678147) RGD PMID:11562355, PMID:16678147 MGI:2150572, MGI:3701373 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1347466 (MGI:2150572|PMID:11562355), (MGI:3701373|PMID:16678147) RGD PMID:11562355, PMID:16678147 MGI:2150572, MGI:3701373 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Hoxa3 homeobox A3 ISO MGI:1857992 (MGI:3613407|PMID:15714286) RGD PMID:15714286 MGI:3613407 NCBI chr 4:82,137,802...82,181,836
Ensembl chr 4:82,138,683...82,141,385
JBrowse link
G Igf1 insulin-like growth factor 1 ISO MGI:1926485|MGI:96787 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Itga4 integrin subunit alpha 4 ISO MGI:1857206 (MGI:3624077|PMID:16529735) RGD PMID:16529735 MGI:3624077 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO
GO_REF:0000107
MGI:1857713 (MGI:1336582|PMID:10196361)
Ensembl
RGD
PMID:10196361 GO_REF:0000107, MGI:1336582 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Lif LIF, interleukin 6 family cytokine IEA
ISO
GO_REF:0000107
MGI:96432 (MGI:3640953|PMID:16691571)
Ensembl
RGD
PMID:16691571 GO_REF:0000107, MGI:3640953 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO MGI:2385439 (MGI:5440773|PMID:22821713) RGD PMID:22821713 MGI:5440773 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
GO_REF:0000107
MGI:1857491 (MGI:1340946|PMID:10395786), (MGI:892058|PMID:9162005)
Ensembl
RGD
PMID:9162005, PMID:10395786 GO_REF:0000107, MGI:1340946, MGI:892058 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO MGI:2182778 (MGI:3714698|PMID:17403661) RGD PMID:17403661 MGI:3714698 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nol3 nucleolar protein 3 IEA
ISO
GO_REF:0000107
(MGI:5469572|PMID:22082675)
Ensembl
RGD
PMID:22082675 GO_REF:0000107, MGI:5469572 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Nos2 nitric oxide synthase 2 IMP RGD PMID:15800493 RGD:1580261 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Nos3 nitric oxide synthase 3 IEA
ISO
GO_REF:0000107
(MGI:3702849|PMID:9466966)
Ensembl
RGD
PMID:9466966 GO_REF:0000107, MGI:3702849 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Rspo3 R-spondin 3 ISO (MGI:5751613|PMID:26766444) RGD PMID:26766444 MGI:5751613 NCBI chr 1:30,681,648...30,768,038
Ensembl chr 1:30,681,681...30,766,860
JBrowse link
G Sema3c semaphorin 3C ISO MGI:2150759 (MGI:2149435|PMID:11688556) RGD PMID:11688556 MGI:2149435 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446
JBrowse link
G Tbx1 T-box transcription factor 1 ISO MGI:1099809|MGI:99604 (MGI:3690261|PMID:17000704) RGD PMID:17000704 MGI:3690261 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO MGI:1888389 (MGI:3608105|PMID:12393102) RGD PMID:12393102 MGI:3608105 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO (MGI:5617089|PMID:25382630) RGD PMID:25382630 MGI:5617089 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Tgm2 transglutaminase 2 IMP RGD PMID:15550691 RGD:1579986 NCBI chr 3:154,597,165...154,627,257
Ensembl chr 3:154,597,168...154,627,257
JBrowse link
G Vegfa vascular endothelial growth factor A IMP RGD PMID:16203926 RGD:1580556 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
bone remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:29224185 RGD:13792728 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Efna2 ephrin A2 IBA
ISO
PMID:21873635
(MGI:5284751|PMID:19299512)
RGD PMID:19299512, PMID:21873635 MGI:5284751, RGD:13792537 NCBI chr 7:12,382,636...12,393,266
Ensembl chr 7:12,382,636...12,393,266
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO MGI:1857079 (MGI:1333398|PMID:10024383) RGD PMID:10024383 MGI:1333398 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Epha2 Eph receptor A2 ISO (MGI:5284751|PMID:19299512) RGD PMID:19299512 MGI:5284751 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Gja1 gap junction protein, alpha 1 ISS
ISO
GO_REF:0000024
(MGI:6274948|PMID:25270829)
UniProt
RGD
PMID:25270829 GO_REF:0000024, MGI:6274948 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IDA RGD PMID:29224185 RGD:13792728 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B ISO MGI:1278315|MGI:98796 (MGI:3836667|PMID:19041748) RGD PMID:19041748 MGI:3836667 NCBI chr 8:89,113,984...89,130,830
Ensembl chr 8:89,129,453...89,130,991
JBrowse link
G Il6 interleukin 6 IEP RGD PMID:16193234 RGD:1601024 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISS
ISO
GO_REF:0000024
(MGI:4360132|PMID:19605502)
UniProt
RGD
PMID:19605502 GO_REF:0000024, MGI:4360132 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G LOC24906 RoBo-1 IEP PMID:9461570 UniProt PMID:9461570 RGD:1299027 NCBI chr10:43,871,628...43,880,549
Ensembl chr10:43,871,613...43,880,055
JBrowse link
G Lrp5 LDL receptor related protein 5 IBA
ISO
PMID:21873635
MGI:1298218|MGI:2183279|MGI:3530598|MGI:3612485|MGI:96274|MGI:98796 (MGI:2178168|PMID:11956231), (MGI:3653806|PMID:15537447), (MGI:3654194|PMID:12817748), (MGI:3694400|PMID:16790443), (MGI:3762069|PMID:17627087), (MGI:3768210|PMID:15207752), (MGI:3777913|PMID:17147489), (MGI:3836667|PMID:19041748)
RGD PMID:11956231, PMID:12817748, PMID:15207752, PMID:15537447, PMID:16790443, PMID:17147489, PMID:17627087, PMID:19041748, PMID:21873635 MGI:2178168, MGI:3653806, MGI:3654194, MGI:3694400, MGI:3762069, MGI:3768210, MGI:3777913, MGI:3836667, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 IBA
ISO
PMID:21873635
MGI:1278315 (MGI:3653806|PMID:15537447)
RGD PMID:15537447, PMID:21873635 MGI:3653806, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO MGI:2180017 (MGI:2178869|PMID:11790802) RGD PMID:11790802 MGI:2178869 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Mitf melanocyte inducing transcription factor ISO MGI:1856095 (MGI:2180980|PMID:12086670) RGD PMID:12086670 MGI:2180980 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532
JBrowse link
G Notch2 notch receptor 2 IEA
ISO
GO_REF:0000107
(PMID:21378985), (PMID:21378989)
Ensembl
RGD
PMID:21378985, PMID:21378989 GO_REF:0000107 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 ISS
ISO
GO_REF:0000024
(MGI:5779580|PMID:27119146), (MGI:5897747|PMID:23959653)
UniProt
RGD
PMID:23959653, PMID:27119146 GO_REF:0000024, MGI:5779580, MGI:5897747 NCBI chr10:88,318,231...88,325,326
Ensembl chr10:88,318,817...88,325,326
JBrowse link
G Ptprv protein tyrosine phosphatase, receptor type, V IEP RGD PMID:7527035 RGD:632779 NCBI chr13:51,935,239...51,956,262
Ensembl chr13:51,935,243...51,955,735
JBrowse link
G Rassf2 Ras association domain family member 2 IEA
ISO
GO_REF:0000107
MGI:5314787 (MGI:5314467|PMID:22227519)
Ensembl
RGD
PMID:22227519 GO_REF:0000107, MGI:5314467 NCBI chr 3:124,574,088...124,610,267
Ensembl chr 3:124,575,621...124,610,267
JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO MGI:2386786 (MGI:1203877|PMID:9560283) RGD PMID:9560283 MGI:1203877 NCBI chr17:9,747,766...9,762,739
Ensembl chr17:9,747,752...9,762,813
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:5690193 (MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
G Spp2 secreted phosphoprotein 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:95,501,512...95,509,646
Ensembl chr 9:95,501,778...95,506,365
JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO MGI:1278315|MGI:96274 (MGI:3836667|PMID:19041748) RGD PMID:19041748 MGI:3836667 NCBI chr 1:102,669,868...102,699,442
Ensembl chr 1:102,669,868...102,699,442
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (MGI:2181820|PMID:10421844) RGD PMID:10421844 MGI:2181820 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
G Wnt16 Wnt family member 16 ISO MGI:5467557 (MGI:5439244|PMID:22792071) RGD PMID:22792071 MGI:5439244 NCBI chr 4:49,369,246...49,388,156
Ensembl chr 4:49,369,296...49,379,703
JBrowse link
bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant TAS
ISO
IBA
IEA
IEP
MGI:2180086 (MGI:83673|PMID:8898228)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:8898228, PMID:1722212, PMID:21873635, PMID:20069278 GO_REF:0000107, MGI:83673, RGD:1298628, RGD:13792537, RGD:2315871 NCBI chr 8:23,142,733...23,149,067
Ensembl chr 8:23,142,734...23,148,396
JBrowse link
G Adrb2 adrenoceptor beta 2 IEA
ISO
GO_REF:0000107
MGI:1859675 (MGI:3575849|PMID:15724149)
Ensembl
RGD
PMID:15724149 GO_REF:0000107, MGI:3575849 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Ccdc154 coiled-coil domain containing 154 ISO MGI:5702426 (MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:5697796 NCBI chr10:14,518,240...14,529,920
Ensembl chr10:14,519,164...14,528,277
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:1858008|MGI:2148567|MGI:3041864|MGI:98504 (MGI:3578468|PMID:15866165)
Ensembl
RGD
PMID:15866165 GO_REF:0000107, MGI:3578468 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctsk cathepsin K IMP
ISO
MGI:2182131 (MGI:4397742|PMID:19834056) RGD PMID:19834056, PMID:10430032 MGI:4397742, RGD:1601030 NCBI chr 2:196,655,469...196,666,447
Ensembl chr 2:196,655,469...196,666,446
JBrowse link
G Ctss cathepsin S IMP RGD PMID:10470376 RGD:5687153 NCBI chr 2:197,655,780...197,679,768
Ensembl chr 2:197,655,786...197,679,458
JBrowse link
G Gpr55 G protein-coupled receptor 55 ISO (PMID:19805329) RGD PMID:19805329 NCBI chr 9:92,961,431...93,011,157
Ensembl chr 9:92,962,738...92,963,697
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:88276 (MGI:3578468|PMID:15866165) RGD PMID:15866165 MGI:3578468 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:1335697|PMID:10208865) RGD PMID:10208865 MGI:1335697 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Il7 interleukin 7 IEA
ISO
ISS
GO_REF:0000107
(MGI:2448204|PMID:12490655)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12490655 GO_REF:0000024, GO_REF:0000107, MGI:2448204 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 ISO MGI:5568128 (MGI:5564766|PMID:23526378) RGD PMID:23526378 MGI:5564766 NCBI chr 1:127,166,866...127,301,053
Ensembl chr 1:127,166,431...127,292,090
JBrowse link
G Mir34a microRNA 34a ISO (MGI:5613071|PMID:25043055) RGD PMID:25043055 MGI:5613071 NCBI chr 5:167,092,491...167,092,592
Ensembl chr 5:167,092,491...167,092,592
JBrowse link
G Ncdn neurochondrin ISO (MGI:1336772|PMID:10231559) RGD PMID:10231559 MGI:1336772 NCBI chr 5:144,769,452...144,779,271
Ensembl chr 5:144,769,452...144,779,212
JBrowse link
G Nox4 NADPH oxidase 4 ISO (MGI:1930898|PMID:11098048) RGD PMID:11098048 MGI:1930898 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
G Pth parathyroid hormone TAS RGD PMID:11145578 RGD:61525 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO MGI:2154519 (MGI:3624906|PMID:9832460) RGD PMID:9832460 MGI:3624906 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISS
ISO
GO_REF:0000024
(MGI:3040548|PMID:14739300)
UniProt
RGD
PMID:14739300 GO_REF:0000024, MGI:3040548 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rab3d RAB3D, member RAS oncogene family ISO (PMID:21262767) RGD PMID:21262767 NCBI chr 8:22,920,238...22,929,368
Ensembl chr 8:22,918,699...22,929,294
JBrowse link
G Rab7a RAB7A, member RAS oncogene family IMP RGD PMID:11514537 RGD:729760 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rac1 Rac family small GTPase 1 IDA RGD PMID:10350213 RGD:1599401 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac2 Rac family small GTPase 2 IDA RGD PMID:10350213 RGD:1599401 NCBI chr 7:119,769,708...119,797,111
Ensembl chr 7:119,783,849...119,797,098
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:5690193 (MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISS
ISO
IBA
GO_REF:0000024
MGI:1857247 (MGI:3040548|PMID:14739300), (MGI:4353464|PMID:19448635)
PMID:21873635
UniProt
RGD
PMID:14739300, PMID:19448635, PMID:21873635 GO_REF:0000024, MGI:3040548, MGI:4353464, RGD:13792537 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:1856973|MGI:5496553 (MGI:3829104|PMID:18768394), (MGI:5308498|PMID:22087326), (MGI:5470331|PMID:23166162), (MGI:5488585|PMID:21305608), (MGI:6296816|PMID:23908015) RGD PMID:18768394, PMID:21305608, PMID:22087326, PMID:23166162, PMID:23908015 MGI:3829104, MGI:5308498, MGI:5470331, MGI:5488585, MGI:6296816 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO (MGI:2448204|PMID:12490655) RGD PMID:12490655 MGI:2448204 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
G Tpp1 tripeptidyl peptidase 1 IEA
ISS
ISO
GO_REF:0000107
PMID:14609438
(PMID:8215436)
Ensembl
RGD
PMID:8215436, PMID:14609438 GO_REF:0000107, RGD:8554137 NCBI chr 1:170,588,036...170,594,159
Ensembl chr 1:170,588,035...170,594,168
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (MGI:1335941|PMID:10215628) RGD PMID:10215628 MGI:1335941 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
connective tissue replacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umod uromodulin IEA
ISO
GO_REF:0000107
(MGI:6094531|PMID:29145399), (MGI:6109043|PMID:28785050)
Ensembl
RGD
PMID:28785050, PMID:29145399 GO_REF:0000107, MGI:6094531, MGI:6109043 NCBI chr 1:189,186,027...189,199,939
Ensembl chr 1:189,186,026...189,199,376
JBrowse link
connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec10a C-type lectin domain containing 10A ISO MGI:2183546 (MGI:3621265|PMID:15784728) RGD PMID:15784728 MGI:3621265 NCBI chr10:56,764,927...56,769,447
Ensembl chr10:56,764,927...56,769,457
JBrowse link
G F2r coagulation factor II (thrombin) receptor ISO
IEA
ISS
(PMID:9639571)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9639571 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:26,118,760...26,135,340
Ensembl chr 2:26,118,760...26,135,340
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO
GO_REF:0000107
(MGI:3772289|PMID:18037992)
Ensembl
RGD
PMID:18037992 GO_REF:0000107, MGI:3772289 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Il1a interleukin 1 alpha IEA
ISO
GO_REF:0000107
(MGI:3621265|PMID:15784728)
Ensembl
RGD
PMID:15784728 GO_REF:0000107, MGI:3621265 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO (MGI:5462501|PMID:23100531) RGD PMID:23100531 MGI:5462501 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 IEP RGD PMID:20110414 RGD:4142798 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Bsx brain specific homeobox ISO MGI:3719242|MGI:3719245 (MGI:3718939|PMID:17485440) RGD PMID:17485440 MGI:3718939 NCBI chr 8:45,061,670...45,065,430
Ensembl chr 8:45,061,670...45,065,430
JBrowse link
G Capn1 calpain 1 IEA
ISO
GO_REF:0000107
(MGI:5543358|PMID:22555453)
Ensembl
RGD
PMID:22555453 GO_REF:0000107, MGI:5543358 NCBI chr 1:221,346,081...221,370,965
Ensembl chr 1:221,346,066...221,370,322
JBrowse link
G Cav1 caveolin 1 IEA
ISO
GO_REF:0000107
MGI:2180364 (MGI:3703676|PMID:12388746)
Ensembl
RGD
PMID:12388746 GO_REF:0000107, MGI:3703676 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cp ceruloplasmin IEP RGD PMID:28089327 RGD:25671605 NCBI chr 2:104,744,249...104,803,034
Ensembl chr 2:104,744,461...104,799,853
JBrowse link
G Elf3 E74 like ETS transcription factor 3 ISO (MGI:3715065|PMID:9806763) RGD PMID:9806763 MGI:3715065 NCBI chr13:52,083,873...52,088,798
Ensembl chr13:52,083,859...52,088,780
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:10653587 RGD:2290014 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:10653587 RGD:2290014 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 ISO MGI:3663363 (MGI:3713633|PMID:17255210) RGD PMID:17255210 MGI:3713633 NCBI chr 9:80,154,230...80,166,813
Ensembl chr 9:80,150,211...80,167,033
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IEP RGD PMID:9409757 RGD:4107723 NCBI chr17:47,383,983...47,394,065
Ensembl chr17:47,297,489...47,394,328
JBrowse link
G Stat5a signal transducer and activator of transcription 5A IDA RGD PMID:16227201 RGD:2291942 NCBI chr10:88,764,732...88,789,060
Ensembl chr10:88,764,732...88,789,057
JBrowse link
negative regulation of blood vessel remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase IEA
ISO
GO_REF:0000107
(MGI:5475443|PMID:23152932)
Ensembl
RGD
PMID:23152932 GO_REF:0000107, MGI:5475443 NCBI chr10:64,565,121...64,657,079
Ensembl chr10:64,567,268...64,657,089
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO (MGI:5475443|PMID:23152932) RGD PMID:23152932 MGI:5475443 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G Cst3 cystatin C ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
negative regulation of bone remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
(PMID:19072540)
Ensembl
RGD
PMID:19072540 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
negative regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin-related polypeptide alpha ISO (PMID:10822112), (PMID:17241109) RGD PMID:10822112, PMID:17241109 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Cartpt CART prepropeptide ISO (PMID:16614075)
UniProtKB:P56450 (MGI:3696590|PMID:16614075)
RGD PMID:16614075 MGI:3696590 NCBI chr 2:30,125,249...30,127,408
Ensembl chr 2:30,125,249...30,127,269
JBrowse link
G Cd38 CD38 molecule IDA RGD PMID:10477767 RGD:2307268 NCBI chr14:71,714,768...71,754,990
Ensembl chr14:71,715,269...71,754,672
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:5560663 (MGI:5691608|PMID:25490771) RGD PMID:25490771 MGI:5691608 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cldn18 claudin 18 ISO MGI:5007067 (MGI:5489769|PMID:22437732) RGD PMID:22437732 MGI:5489769 NCBI chr 8:107,933,725...107,960,656
Ensembl chr 8:107,934,860...107,952,530
JBrowse link
G Csk C-terminal Src kinase IDA RGD PMID:10411542 RGD:5134371 NCBI chr 8:62,405,714...62,424,707
Ensembl chr 8:62,405,715...62,424,303
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IMP RGD PMID:8694895 RGD:7257714 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Fshr follicle stimulating hormone receptor ISO MGI:2384087 (MGI:1926755|PMID:11089565), (MGI:3769858|PMID:17332067) RGD PMID:11089565, PMID:17332067 MGI:1926755, MGI:3769858 NCBI chr 6:12,796,383...12,997,817
Ensembl chr 6:12,796,383...12,997,817
JBrowse link
G Gpr137 G protein-coupled receptor 137 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,194,266...222,197,252
Ensembl chr 1:222,194,266...222,197,252
JBrowse link
G Gpr137b G protein-coupled receptor 137B IBA
ISO
PMID:21873635
(MGI:6362357|PMID:31173907)
RGD PMID:31173907, PMID:21873635 MGI:6362357, RGD:13792537 NCBI chr17:90,670,852...90,709,003
Ensembl chr17:90,670,872...90,746,804
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO MGI:4351741 (MGI:5581387|PMID:24561287) RGD PMID:24561287 MGI:5581387 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Iapp islet amyloid polypeptide ISO MGI:2656235 (MGI:3037515|PMID:14970190) RGD PMID:14970190 MGI:3037515 NCBI chr 4:176,509,863...176,517,903
Ensembl chr 4:176,510,696...176,516,083
JBrowse link
G Il6 interleukin 6 ISO (MGI:5795829|PMID:11159963) RGD PMID:11159963 MGI:5795829 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IEA
ISO
GO_REF:0000107
MGI:2386884 (MGI:2386137|PMID:12161749)
Ensembl
RGD
PMID:12161749 GO_REF:0000107, MGI:2386137 NCBI chr 9:94,745,220...94,850,778
Ensembl chr 9:94,745,217...94,850,771
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:2667237|PMID:12677010) RGD PMID:12677010 MGI:2667237 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Tmem119 transmembrane protein 119 ISO (MGI:5543589|PMID:22416756) RGD PMID:22416756 MGI:5543589 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B IMP
IDA
RGD PMID:11839361, PMID:16912914 RGD:730196, RGD:1624170 NCBI chr 7:93,798,580...93,826,586
Ensembl chr 7:93,798,545...93,826,665
JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing, B IBA
ISO
PMID:21873635
(MGI:5619442|PMID:23149425)
RGD PMID:23149425, PMID:21873635 MGI:5619442, RGD:13792537 NCBI chr 8:45,224,053...45,375,450
Ensembl chr 8:45,223,992...45,375,435
JBrowse link
G Vegfa vascular endothelial growth factor A IMP RGD PMID:15312247 RGD:1580559 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
negative regulation of connective tissue replacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 ISO (MGI:5780531|PMID:25590961) RGD PMID:25590961 MGI:5780531 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
negative regulation of connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IEA
ISO
GO_REF:0000107
MGI:2451038 (MGI:3774727|PMID:18245812)
Ensembl
RGD
PMID:18245812 GO_REF:0000107, MGI:3774727 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
negative regulation of erythrocyte clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule ISO MGI:2179996 (MGI:2179980|PMID:9028339) RGD PMID:9028339 MGI:2179980 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
negative regulation of tissue remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21167013 RGD:5129191 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
ossification involved in bone remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:3830252 (MGI:3829514|PMID:18779865) RGD PMID:18779865 MGI:3829514 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Gdf5 growth differentiation factor 5 IEP RGD PMID:10404008 RGD:2289026 NCBI chr 3:151,482,672...151,487,129
Ensembl chr 3:151,483,249...151,486,693
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(PMID:19442624)
UniProt
RGD
PMID:19442624 GO_REF:0000024 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
positive regulation of apoptotic process involved in mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 ISO MGI:2178779 (MGI:3052392|PMID:15282149) RGD PMID:15282149 MGI:3052392 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857429 (MGI:1337911|PMID:10363969)
Ensembl
RGD
PMID:10363969 GO_REF:0000107, MGI:1337911 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO MGI:1926877 (MGI:3047035|PMID:15105443) RGD PMID:15105443 MGI:3047035 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:11080164) RGD PMID:11080164 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Vdr vitamin D receptor IEA
ISO
GO_REF:0000107
MGI:2183404 (MGI:3051725|PMID:15178742)
Ensembl
RGD
PMID:15178742 GO_REF:0000107, MGI:3051725 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
positive regulation of blood vessel remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erg ETS transcription factor ERG NOT ISO MGI:5443838 (MGI:5442628|PMID:22932696)
MGI:5443836 (MGI:5442628|PMID:22932696)
RGD PMID:22932696 MGI:5442628 NCBI chr11:35,645,317...35,749,637
Ensembl chr11:35,646,116...35,749,594
JBrowse link
G Hrg histidine-rich glycoprotein IEA
ISO
ISS
GO_REF:0000107
(MGI:5427055|PMID:22348394)
GO_REF:0000024
(PMID:21215706)
Ensembl
RGD
UniProt
PMID:21215706, PMID:22348394 GO_REF:0000024, GO_REF:0000107, MGI:5427055 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G Il18 interleukin 18 IDA RGD PMID:19717152 RGD:4889401 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Tmbim1 transmembrane BAX inhibitor motif containing 1 ISS
ISO
GO_REF:0000024
(MGI:5572875|PMID:16636500)
UniProt
RGD
PMID:16636500 GO_REF:0000024, MGI:5572875 NCBI chr 9:81,569,289...81,586,469
Ensembl chr 9:81,569,289...81,586,553
JBrowse link
positive regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 ISO (MGI:5009189|PMID:11341326), (MGI:5009349|PMID:20683884) RGD PMID:11341326, PMID:20683884 MGI:5009189, MGI:5009349 NCBI chr 1:212,317,510...212,332,895
Ensembl chr 1:212,317,848...212,330,349
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IMP RGD PMID:10500999 RGD:1625797 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5575464|PMID:22467241)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22467241 GO_REF:0000024, GO_REF:0000107, MGI:5575464 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Car2 carbonic anhydrase 2 IMP RGD PMID:8674544 RGD:1600722 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein ISO (MGI:3588832|PMID:16061724), (MGI:5426134|PMID:17164993), (MGI:5426135|PMID:16937266) RGD PMID:16061724, PMID:16937266, PMID:17164993 MGI:3588832, MGI:5426134, MGI:5426135 NCBI chr 7:78,642,016...78,651,763
Ensembl chr 7:78,649,875...78,650,906
JBrowse link
G Def8 differentially expressed in FDCP 8 homolog ISS
ISO
GO_REF:0000024
(MGI:5806241|PMID:27777970)
UniProt
RGD
PMID:27777970 GO_REF:0000024, MGI:5806241 NCBI chr19:56,238,353...56,259,867
Ensembl chr19:56,243,408...56,259,196
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO MGI:3526402 (MGI:5780798|PMID:21308776) RGD PMID:21308776 MGI:5780798 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Egfr epidermal growth factor receptor IMP RGD PMID:2981075 RGD:10395245 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa ISO (MGI:5641770|PMID:25824719) RGD PMID:25824719 MGI:5641770 NCBI chr13:89,385,775...89,396,047
Ensembl chr13:89,385,859...89,396,051
JBrowse link
G Fshb follicle stimulating hormone subunit beta ISO MGI:1857434 (MGI:3692338|PMID:16630814) RGD PMID:16630814 MGI:3692338 NCBI chr 3:98,088,321...98,092,131
Ensembl chr 3:98,088,324...98,092,131
JBrowse link
G Idua alpha-L-iduronidase ISO MGI:2176236 (MGI:4397742|PMID:19834056) RGD PMID:19834056 MGI:4397742 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Itgb3 integrin subunit beta 3 IMP RGD PMID:8603604 RGD:5024929 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:2673982 (MGI:4365357|PMID:18505367) RGD PMID:18505367 MGI:4365357 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO MGI:2180017 (MGI:3719740|PMID:15878314) RGD PMID:15878314 MGI:3719740 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Mc4r melanocortin 4 receptor ISO (PMID:16614075)
(MGI:3696590|PMID:16614075)
RGD PMID:16614075 MGI:3696590 NCBI chr18:62,612,838...62,614,725
Ensembl chr18:62,612,838...62,614,725
JBrowse link
G Oscar osteoclast associated Ig-like receptor ISO (MGI:2178877|PMID:11805147) RGD PMID:11805147 MGI:2178877 NCBI chr 1:64,182,174...64,188,658
Ensembl chr 1:64,182,422...64,188,658
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 ISS
ISO
GO_REF:0000024
(MGI:5806241|PMID:27777970)
UniProt
RGD
PMID:27777970 GO_REF:0000024, MGI:5806241 NCBI chr10:91,451,890...91,500,675
Ensembl chr10:91,451,865...91,500,661
JBrowse link
G Ppargc1b PPARG coactivator 1 beta ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr18:56,626,725...56,650,524
Ensembl chr18:56,626,712...56,728,968
JBrowse link
G Prkca protein kinase C, alpha ISO (MGI:5284791|PMID:16014375) RGD PMID:16014375 MGI:5284791 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:11792579 RGD:729815 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Spp1 secreted phosphoprotein 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11792563, PMID:21873635 RGD:1581129, RGD:13792537 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Syk spleen associated tyrosine kinase IEA
ISO
ISS
GO_REF:0000107
(MGI:3703840|PMID:17353363)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17353363 GO_REF:0000024, GO_REF:0000107, MGI:3703840 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
G Tf transferrin ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr 8:111,694,570...111,721,275
Ensembl chr 8:111,673,547...111,721,333
JBrowse link
G Tfrc transferrin receptor ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr11:71,397,423...71,419,263
Ensembl chr11:71,397,383...71,419,223
JBrowse link
G Tmem64 transmembrane protein 64 ISO MGI:3880885 (MGI:5495340|PMID:23395171) RGD PMID:23395171 MGI:5495340 NCBI chr 5:28,850,864...28,898,203
Ensembl chr 5:28,850,950...28,867,227
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A IBA
ISO
PMID:21873635
(MGI:2178877|PMID:11805147)
RGD PMID:11805147, PMID:21873635 MGI:2178877, RGD:13792537 NCBI chr13:25,778,306...25,835,802
Ensembl chr13:25,778,317...25,835,957
JBrowse link
G Tnfsf11 TNF superfamily member 11 IMP
ISO
(PMID:17241109) RGD PMID:17241109, PMID:11092398 RGD:730134 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
positive regulation of connective tissue replacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf6 Kruppel-like factor 6 ISO (MGI:5447902|PMID:22820290) RGD PMID:22820290 MGI:5447902 NCBI chr17:67,887,939...67,945,052
Ensembl chr17:67,887,939...67,945,037
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO RNAcentral:URS0000021B51_10090 (MGI:5784969|PMID:24657879) RGD PMID:24657879 MGI:5784969 NCBI chr 2:241,909,332...242,186,861
Ensembl chr 2:241,909,832...242,184,854
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 IEA
ISO
GO_REF:0000107
(PMID:28679962)
Ensembl
RGD
PMID:28679962 GO_REF:0000107 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 IMP
ISO
PMID:28679962
(MGI:6158813|PMID:28679962)
RGD PMID:28679962, PMID:28679962 MGI:6158813, RGD:13601991 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
regulation of blood vessel remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 ISS
ISO
GO_REF:0000024
(MGI:3640069|PMID:16680193)
UniProt
RGD
PMID:16680193 GO_REF:0000024, MGI:3640069 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 IEA
ISO
ISS
GO_REF:0000107
(MGI:1309699|PMID:9794766)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9794766 GO_REF:0000024, GO_REF:0000107, MGI:1309699 NCBI chr10:35,078,782...35,120,296
Ensembl chr10:35,078,726...35,121,599
JBrowse link
regulation of bone remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide ISO MGI:3576858 (MGI:3575849|PMID:15724149) RGD PMID:15724149 MGI:3575849 NCBI chr 2:30,125,249...30,127,408
Ensembl chr 2:30,125,249...30,127,269
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:2135670 (MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:4437389 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO MGI:2445468|MGI:3776013 (MGI:5317265|PMID:21346198) RGD PMID:21346198 MGI:5317265 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B ISO MGI:5297505 (MGI:5295788|PMID:21982707) RGD PMID:21982707 MGI:5295788 NCBI chr19:29,592,889...30,341,528
Ensembl chr19:29,597,905...29,968,424
JBrowse link
G Lep leptin ISS
ISO
GO_REF:0000024
(MGI:1352383|PMID:10660043)
UniProt
RGD
PMID:10660043 GO_REF:0000024, MGI:1352383 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Lepr leptin receptor ISS
ISO
GO_REF:0000024
(MGI:1352383|PMID:10660043)
UniProt
RGD
PMID:10660043 GO_REF:0000024, MGI:1352383 NCBI chr 5:120,503,475...120,682,281
Ensembl chr 5:120,564,645...120,682,221
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(MGI:5008226|PMID:21185956)
UniProt
RGD
PMID:21185956 GO_REF:0000024, MGI:5008226 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mepe matrix extracellular phosphoglycoprotein IEP RGD PMID:10967096 RGD:70633 NCBI chr14:6,782,011...6,793,561
Ensembl chr14:6,782,012...6,793,558
JBrowse link
G Suco SUN domain containing ossification factor IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:4452525|PMID:20440000)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20440000, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:4452525, RGD:13792537 NCBI chr13:79,736,485...79,801,133
Ensembl chr13:79,736,482...79,801,561
JBrowse link
G Syt7 synaptotagmin 7 ISS
ISO
GO_REF:0000024
(MGI:3798323|PMID:18539119)
UniProt
RGD
PMID:18539119 GO_REF:0000024, MGI:3798323 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link
regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calcr calcitonin receptor NOT ISO MGI:3038975 (MGI:3037515|PMID:14970190) RGD PMID:14970190 MGI:3037515 NCBI chr 4:28,627,439...28,702,559
Ensembl chr 4:28,627,442...28,702,559
JBrowse link
G Car2 carbonic anhydrase 2 TAS RGD PMID:9665810 RGD:1342423 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP PMID:17121910 UniProt PMID:17121910 RGD:2293713 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Gpr137 G protein-coupled receptor 137 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,194,266...222,197,252
Ensembl chr 1:222,194,266...222,197,252
JBrowse link
G Il20ra interleukin 20 receptor subunit alpha ISO MGI:5302406 (MGI:5296273|PMID:21844205) RGD PMID:21844205 MGI:5296273 NCBI chr 1:15,180,328...15,222,785
Ensembl chr 1:15,180,328...15,222,785
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS
GO_REF:0000107
MGI:1857478 (MGI:3689489|PMID:17053831)
GO_REF:0000024
Ensembl
RGD
HGNC
PMID:17053831 GO_REF:0000024, GO_REF:0000107, MGI:3689489 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 IEA
ISO
GO_REF:0000107
(MGI:5303050|PMID:21803180)
Ensembl
RGD
PMID:21803180 GO_REF:0000107, MGI:5303050 NCBI chr 4:30,546,772...30,556,774
Ensembl chr 4:30,546,664...30,556,814
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISS
ISO
GO_REF:0000024
(MGI:3839226|PMID:19204730)
UniProt
RGD
PMID:19204730 GO_REF:0000024, MGI:3839226 NCBI chr 2:218,654,406...218,658,761
Ensembl chr 2:218,654,554...218,658,761
JBrowse link
G Siglec15 sialic acid binding Ig-like lectin 15 IBA
ISO
PMID:21873635
(MGI:5467208|PMID:22451653)
RGD PMID:22451653, PMID:21873635 MGI:5467208, RGD:13792537 NCBI chr18:74,403,384...74,417,333
Ensembl chr18:74,403,384...74,417,333
JBrowse link
regulation of tissue remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (PMID:30449416) RGD PMID:30449416 NCBI chr13:88,311,639...88,436,561
Ensembl chr13:88,317,145...88,436,789
JBrowse link
G Gpnmb glycoprotein nmb ISO (PMID:25010402)
(MGI:5605931|PMID:25010402)
RGD PMID:25010402 MGI:5605931 NCBI chr 4:78,694,447...78,715,685
Ensembl chr 4:78,694,447...78,715,683
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO
IEA
(PMID:24161931)
GO_REF:0000107
RGD
Ensembl
PMID:24161931 GO_REF:0000107 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Thbs4 thrombospondin 4 ISS
ISO
GO_REF:0000024
(MGI:5436396|PMID:22362893)
UniProt
RGD
PMID:22362893 GO_REF:0000024, MGI:5436396 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Tp53 tumor protein p53 ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
Sertoli cell barrier remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IMP RGD PMID:28880272 RGD:13703098 NCBI chr 4:22,225,123...22,307,577
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Actr3 actin related protein 3 IEP RGD PMID:20534520 RGD:11530053 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.