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ONTOLOGY REPORT - ANNOTATIONS


Term:branching morphogenesis of an epithelial tube
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Accession:GO:0048754 term browser browse the term
Definition:The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
Synonyms:related_synonym: tubulogenesis



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branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:3052392|PMID:15282149)
(MGI:2178150|PMID:11900463)
MGI PMID:11900463 PMID:15282149 MGI:2178150 MGI:3052392 NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,104,082...33,167,356
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10706139) UniProt
UniProt
PMID:10706139 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G CASR calcium sensing receptor involved_in ISO
IEA
positive regulation RGD
Ensembl
Ensembl
PMID:20117086 GO_REF:0000107 RGD:7206840 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3837628|PMID:19197003) Ensembl
Ensembl
MGI
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 1:24,745,447...24,844,321
Ensembl chr 1:24,745,382...24,844,321
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:3617296 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IDA (PMID:17959718) UniProt
UniProt
PMID:17959718 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G GDF7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934988|PMID:11356025) Ensembl
Ensembl
MGI
PMID:11356025 GO_REF:0000107 MGI:1934988 NCBI chr 2:20,667,144...20,679,243
Ensembl chr 2:20,667,144...20,679,243
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1277743|PMID:9731531) UniProt
UniProt
Ensembl
Ensembl
MGI
PMID:9731531 GO_REF:0000024 GO_REF:0000107 MGI:1277743 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608164|PMID:16247775) MGI
Ensembl
PMID:16247775 GO_REF:0000107 MGI:3608164 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:3616136 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613102|PMID:16375885) MGI
Ensembl
PMID:16375885 GO_REF:0000107 MGI:3613102 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2678847|PMID:14568553) MGI
Ensembl
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IMP (PMID:16153003) UniProt
UniProt
PMID:16153003 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MGP matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857
JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:58,205,441...58,219,255
Ensembl chr17:58,205,441...58,219,605
JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3527919|PMID:15572153) Ensembl
Ensembl
MGI
PMID:15572153 GO_REF:0000107 MGI:3527919 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3574742|PMID:15716345) MGI PMID:15716345 MGI:3574742 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1891543|PMID:11002344) UniProt
Ensembl
UniProt
MGI
PMID:11002344 GO_REF:0000024 GO_REF:0000107 MGI:1891543 NCBI chr 8:23,678,693...23,682,938
Ensembl chr 8:23,678,697...23,682,938
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3529381|PMID:15064243) Ensembl
Ensembl
MGI
PMID:15064243 GO_REF:0000107 MGI:3529381 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IMP (PMID:20457839) UniProt
UniProt
PMID:20457839 NCBI chr11:77,322,017...77,530,009
Ensembl chr11:77,322,017...77,474,635
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IDA
IEA
(PMID:12482949) UniProt
Ensembl
UniProt
PMID:12482949 GO_REF:0000107 NCBI chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_positive_effect
involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4880601|PMID:20875407) UniProt
Ensembl
UniProt
UniProt
PMID:20875407 GO_REF:0000024 GO_REF:0000107 MGI:4880601 NCBI chr 6:51,615,299...52,087,615
Ensembl chr 6:51,615,299...52,087,613
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3039057|PMID:15042703) Ensembl
Ensembl
MGI
PMID:15042703 GO_REF:0000107 MGI:3039057 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PXN paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:2680875 NCBI chr12:120,210,447...120,265,730
Ensembl chr12:120,210,439...120,265,771
JBrowse link
G RASIP1 Ras interacting protein 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:48,720,585...48,740,610
Ensembl chr19:48,720,585...48,740,610
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1289788|PMID:9768363)
(MGI:3050270|PMID:15305287)
(MGI:3039063|PMID:15042696)
UniProt
Ensembl
UniProt
MGI
PMID:9768363 PMID:15042696 PMID:15305287 GO_REF:0000024 GO_REF:0000107 MGI:1289788 MGI:3039063 MGI:3050270 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IDA
IMP
(PMID:18345009)
(PMID:19005219)
UniProt
UniProt
PMID:18345009 PMID:19005219 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331548|PMID:10074434) MGI
Ensembl
PMID:10074434 GO_REF:0000107 MGI:1331548 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675515|PMID:12950082) MGI
Ensembl
Ensembl
PMID:12950082 GO_REF:0000107 MGI:2675515 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM67 transmembrane protein 67 involved_in ISO (MGI:4441259|PMID:17185389) UniProt PMID:17185389 MGI:4441259 NCBI chr 8:93,754,844...93,832,653
Ensembl chr 8:93,754,844...93,819,234
JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:3613102 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178881|PMID:11948913) MGI
Ensembl
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3814777|PMID:18614704) Ensembl
Ensembl
MGI
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IDA (PMID:11731227) UniProt
UniProt
PMID:11731227 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703113|PMID:17078885) Ensembl
MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IMP (PMID:20818663) BHF-UCL
BHF-UCL
PMID:20818663 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,157
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IC
IMP
IEA
ISO
(PMID:20123964)
(MGI:3833040|PMID:19154719)
(MGI:2675534|PMID:12975353)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:12975353 PMID:19154719 PMID:20123964 GO_REF:0000107 MGI:2675534 MGI:3833040 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177
JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G EDN1 endothelin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74210|PMID:7615798) Ensembl
Ensembl
MGI
PMID:7615798 GO_REF:0000107 MGI:74210 NCBI chr 6:12,256,484...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EDNRA endothelin receptor type A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3606840|PMID:15664398) Ensembl
Ensembl
MGI
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
JBrowse link
G ENG endoglin involved_in ISS
IEA
(PMID:8194490) BHF-UCL
BHF-UCL
Ensembl
PMID:8194490 GO_REF:0000107 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588904|PMID:15996652) Ensembl
Ensembl
MGI
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:3045573 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3606840|PMID:15664398) Ensembl
Ensembl
MGI
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588904|PMID:15996652) Ensembl
Ensembl
MGI
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr 2:236,161,340...236,168,386
Ensembl chr 2:236,165,236...236,168,386
JBrowse link
G GDF2 growth differentiation factor 2 involved_in IDA
IEA
(PMID:20406889) DFLAT
Ensembl
DFLAT
PMID:20406889 GO_REF:0000107 NCBI chr10:47,322,454...47,327,588
Ensembl chr10:47,322,454...47,327,588
JBrowse link
G GNA13 G protein subunit alpha 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583513|PMID:15919816) Ensembl
MGI
Ensembl
PMID:15919816 GO_REF:0000107 MGI:3583513 NCBI chr17:65,009,289...65,056,740
Ensembl chr17:65,009,289...65,056,740
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3574706|PMID:15689378) Ensembl
Ensembl
MGI
PMID:15689378 GO_REF:0000107 MGI:3574706 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within IMP (PMID:23688497) BHF-UCL
BHF-UCL
PMID:23688497 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833040|PMID:19154719) Ensembl
Ensembl
MGI
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956
JBrowse link
G MIR15B microRNA 15b acts_upstream_of IMP (PMID:23688497) BHF-UCL PMID:23688497 NCBI chr 3:160,404,588...160,404,685
Ensembl chr 3:160,404,588...160,404,685
JBrowse link
G MIR16-1 microRNA 16-1 acts_upstream_of IDA (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr13:50,048,973...50,049,061
Ensembl chr13:50,048,973...50,049,061
JBrowse link
G MIR16-2 microRNA 16-2 acts_upstream_of IDA (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2136698|PMID:11439183) Ensembl
Ensembl
MGI
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G NOTCH4 notch receptor 4 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3833040|PMID:19154719)
GO_Central
Ensembl
GO_Central
MGI
PMID:19154719 PMID:21873635 GO_REF:0000107 MGI:3833040 NCBI chr 9:137,299,631...137,302,271
Ensembl chr 9:137,299,631...137,302,271
JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:24401374)
(MGI:3710026|PMID:17428830)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:17428830 PMID:24401374 GO_REF:0000024 GO_REF:0000107 MGI:3710026 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:2389284 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G PLXND1 plexin D1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3050159|PMID:15239958)
(MGI:5509072|PMID:23918385)
Ensembl
Ensembl
MGI
PMID:15239958 PMID:23918385 GO_REF:0000107 MGI:3050159 MGI:5509072 NCBI chr 3:129,555,214...129,606,676
Ensembl chr 3:129,555,214...129,606,676
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr 2:68,178,857...68,252,532
Ensembl chr 2:68,178,857...68,256,237
JBrowse link
G RBM15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833189|PMID:18981216) Ensembl
Ensembl
MGI
PMID:18981216 GO_REF:0000107 MGI:3833189 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681
JBrowse link
G SEMA3E semaphorin 3E involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:83,363,238...83,649,139
Ensembl chr 7:83,363,238...83,649,139
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3583396|PMID:15936751) UniProt
UniProt
Ensembl
MGI
PMID:15936751 GO_REF:0000024 GO_REF:0000107 MGI:3583396 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3811944|PMID:18804439) Ensembl
Ensembl
MGI
PMID:18804439 GO_REF:0000107 MGI:3811944 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STK4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412133|PMID:19786569) Ensembl
Ensembl
MGI
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr20:44,966,512...45,080,021
Ensembl chr20:44,966,479...45,080,021
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578574|PMID:15843414) Ensembl
Ensembl
MGI
PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3703113|PMID:17078885) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:17078885 GO_REF:0000024 GO_REF:0000107 MGI:3703113 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
IMP (PMID:23083510)
(PMID:23688497)
BHF-UCL
BHF-UCL
PMID:23083510 PMID:23688497 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:3848105 NCBI chr18:79,395,930...79,529,323
Ensembl chr18:79,395,856...79,529,325
JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:43,300,982...43,323,108
Ensembl chr 1:43,300,982...43,323,108
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3054694|PMID:15340078) Ensembl
Ensembl
MGI
PMID:15340078 GO_REF:0000107 MGI:3054694 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CCL11 C-C motif chemokine ligand 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CSF1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1932625|PMID:11283268) Ensembl
Ensembl
MGI
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr 6:30,880,970...30,900,156
Ensembl chr 6:30,876,421...30,900,156
JBrowse link
G EPHA2 EPH receptor A2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G ETV4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO (MGI:2667785|PMID:12871699)
(MGI:3828920|PMID:18977342)
MGI PMID:12871699 PMID:18977342 MGI:2667785 MGI:3828920 NCBI chr17:43,527,846...43,546,340
Ensembl chr17:43,527,844...43,579,620
JBrowse link
G KDM5B lysine demethylase 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5619178|PMID:24802759) Ensembl
Ensembl
MGI
PMID:24802759 GO_REF:0000107 MGI:5619178 NCBI chr 1:202,724,495...202,808,421
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3692480|PMID:16973609)
GO_Central
Ensembl
GO_Central
MGI
PMID:16973609 PMID:21873635 GO_REF:0000107 MGI:3692480 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275
JBrowse link
G LRP5L LDL receptor related protein 5 like (pseudogene) involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:25,351,418...25,405,408
Ensembl chr22:25,351,418...25,405,377
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1355063|PMID:10742104) MGI
Ensembl
Ensembl
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr 5:174,724,582...174,730,896
Ensembl chr 5:174,724,582...174,730,896
JBrowse link
G PML PML nuclear body scaffold involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839212|PMID:19261859) Ensembl
Ensembl
MGI
PMID:19261859 GO_REF:0000107 MGI:3839212 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:2180693 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589531|PMID:16007215) Ensembl
Ensembl
MGI
PMID:16007215 GO_REF:0000107 MGI:3589531 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3608166|PMID:16222716) Ensembl
Ensembl
MGI
PMID:16222716 GO_REF:0000107 MGI:3608166 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5504318|PMID:23661704) Ensembl
Ensembl
MGI
PMID:23661704 GO_REF:0000107 MGI:5504318 NCBI chr 5:5,140,330...5,320,304
Ensembl chr 5:5,140,330...5,320,304
JBrowse link
G AGT angiotensinogen NOT|acts_upstream_of_or_within ISO (MGI:77583|PMID:8675666)
(MGI:2655949|PMID:12657564)
MGI PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3036971|PMID:14699151)
(MGI:3768986|PMID:16672320)
Ensembl
Ensembl
MGI
PMID:14699151 PMID:16672320 GO_REF:0000107 MGI:3036971 MGI:3768986 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3583399|PMID:15925496) UniProt
Ensembl
UniProt
MGI
PMID:15925496 GO_REF:0000024 GO_REF:0000107 MGI:3583399 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
(PMID:12631064)
(MGI:3714585|PMID:17522159)
UniProt
UniProt
Ensembl
MGI
PMID:12631064 PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CD44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:2449954 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISS
ISO
(MGI:3717986|PMID:17615577) UniProt
UniProt
UniProt
PMID:17615577 GO_REF:0000024 MGI:3717986 NCBI chr  X:72,301,646...72,307,157
Ensembl chr  X:72,301,638...72,307,187
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714576|PMID:17537789) Ensembl
Ensembl
MGI
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3757813|PMID:17803964) Ensembl
Ensembl
MGI
PMID:17803964 GO_REF:0000107 MGI:3757813 NCBI chr 1:9,848,276...9,910,269
Ensembl chr 1:9,848,276...9,910,336
JBrowse link
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4939936|PMID:21303848) Ensembl
Ensembl
MGI
PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr11:6,621,330...6,655,809
Ensembl chr11:6,621,330...6,655,809
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709697|PMID:17435047)
(MGI:3699022|PMID:17172448)
(MGI:3688770|PMID:16105026)
Ensembl
Ensembl
MGI
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:3686561 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662002|PMID:12783782) Ensembl
Ensembl
MGI
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4939936|PMID:21303848) Ensembl
Ensembl
MGI
PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,918...125,492,932
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:12631064) UniProt
UniProt
PMID:12631064 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603080|PMID:16049111) Ensembl
Ensembl
MGI
PMID:16049111 GO_REF:0000107 MGI:3603080 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675756|PMID:13678594) MGI
Ensembl
PMID:13678594 GO_REF:0000107 MGI:2675756 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623) UniProt
Ensembl
UniProt
MGI
PMID:13678594 PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:2675756 MGI:4949995 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611729|PMID:16396903) Ensembl
Ensembl
MGI
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
Ensembl
MGI
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:133,535,745...133,985,594
Ensembl chr  X:133,535,745...133,987,100
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6094060|PMID:29100091) MGI
Ensembl
Ensembl
PMID:29100091 GO_REF:0000107 MGI:6094060 NCBI chr18:21,242,232...21,526,112
Ensembl chr18:21,242,232...21,526,112
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683817|PMID:14522971) Ensembl
Ensembl
MGI
PMID:14522971 GO_REF:0000107 MGI:2683817 NCBI chr20:23,361,127...23,373,062
Ensembl chr20:23,362,182...23,373,062
JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2135652|PMID:11493536) UniProt
UniProt
Ensembl
MGI
PMID:11493536 GO_REF:0000024 GO_REF:0000107 MGI:2135652 NCBI chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232
JBrowse link
G HOXD11 homeobox D11 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2135652|PMID:11493536) UniProt
UniProt
MGI
PMID:11493536 GO_REF:0000024 MGI:2135652 NCBI chr 2:176,107,280...176,115,679
Ensembl chr 2:176,104,216...176,109,754
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,494,032...13,601,929
Ensembl chr17:13,494,032...13,601,929
JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,301,081...14,349,404
Ensembl chr17:14,301,081...14,349,404
JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr11:6,603,774...6,610,870
Ensembl chr11:6,603,708...6,610,874
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2678847|PMID:14568553) Ensembl
Ensembl
MGI
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7909549) Ensembl
Ensembl
UniProt
PMID:7909549 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:15754038)
(MGI:3714574|PMID:17537792)
BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:15754038 PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
IEP
ISO
(PMID:1337742)
(MGI:3768986|PMID:16672320)
UniProt
UniProt
MGI
PMID:1337742 PMID:16672320 GO_REF:0000024 MGI:3768986 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX8 paired box 8 involved_in IEP (PMID:1337742) UniProt
UniProt
PMID:1337742 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2451200|PMID:12591246) Ensembl
Ensembl
MGI
PMID:12591246 GO_REF:0000107 MGI:2451200 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEP (PMID:11891195) UniProt
UniProt
PMID:11891195 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:1196665 NCBI chr19:6,375,148...6,375,933
Ensembl chr19:6,375,148...6,379,058
JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367286|PMID:19809516) Ensembl
Ensembl
MGI
PMID:19809516 GO_REF:0000107 MGI:4367286 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISS
ISO
(MGI:5563280|PMID:24550112) UniProt
MGI
UniProt
PMID:24550112 GO_REF:0000024 MGI:5563280 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3611729|PMID:16396903) UniProt
Ensembl
UniProt
MGI
PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2662002|PMID:12783782) UniProt
UniProt
Ensembl
MGI
PMID:12783782 GO_REF:0000024 GO_REF:0000107 MGI:2662002 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8787755) Ensembl
Ensembl
UniProt
PMID:8787755 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1347485|PMID:10572052)
(MGI:1202620|PMID:9507058)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:9507058 PMID:10572052 GO_REF:0000024 GO_REF:0000107 MGI:1202620 MGI:1347485 NCBI chr 6:133,889,113...133,895,537
Ensembl chr 6:133,889,113...133,895,553
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI
PMID:10963667 RGD:2308864 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,612,870...18,621,039
Ensembl chr19:18,607,430...18,621,039
JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2178881|PMID:11948913) Ensembl
Ensembl
MGI
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
G WT1 WT1 transcription factor involved_in IGI (PMID:10101119) UniProt
UniProt
PMID:10101119 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (PMID:8674409) MGI
MGI
PMID:8674409 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3788965|PMID:18367557) Ensembl
Ensembl
MGI
PMID:18367557 GO_REF:0000107 MGI:3788965 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3688953|PMID:16989802) UniProt
UniProt
MGI
PMID:16989802 GO_REF:0000024 MGI:3688953 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709664|PMID:17473173) Ensembl
Ensembl
MGI
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5586932|PMID:25043473) Ensembl
MGI
Ensembl
PMID:25043473 GO_REF:0000107 MGI:5586932 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IDA (PMID:9740653) MGI
MGI
PMID:9740653 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1277744|PMID:9731532) Ensembl
Ensembl
MGI
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:5300435 NCBI chr12:88,142,307...88,199,887
Ensembl chr12:88,142,296...88,199,887
JBrowse link
G TNC tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,257
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:78,921,058...78,945,046
Ensembl chr15:78,921,058...78,949,574
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703920|PMID:17369357) Ensembl
Ensembl
MGI
PMID:17369357 GO_REF:0000107 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703920|PMID:17369357) Ensembl
Ensembl
MGI
PMID:17369357 GO_REF:0000107 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3629536|PMID:12021201) Ensembl
Ensembl
MGI
PMID:12021201 GO_REF:0000107 MGI:3629536 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO
IDA
(PMID:8674409) RGD
MGI
MGI
PMID:8674409 PMID:8769111 RGD:2306315 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:3801531|PMID:18533146)
(MGI:3773938|PMID:18231602)
Ensembl
MGI
Ensembl
PMID:18231602 PMID:18533146 GO_REF:0000107 MGI:3773938 MGI:3801531 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTSD cathepsin D NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr11:1,752,755...1,763,927
Ensembl chr11:1,752,752...1,764,573
JBrowse link
G CTSL cathepsin L NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CTSZ cathepsin Z acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500053) UniProt
Ensembl
Ensembl
PMID:17500053 GO_REF:0000107 NCBI chr20:58,995,185...59,007,254
Ensembl chr20:58,985,686...59,008,238
JBrowse link
G DAG1 dystroglycan 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2156962|PMID:11798066) Ensembl
Ensembl
MGI
PMID:11798066 GO_REF:0000107 MGI:2156962 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5487693|PMID:23466739) Ensembl
Ensembl
MGI
PMID:23466739 GO_REF:0000107 MGI:5487693 NCBI chr10:77,790,791...77,940,736
Ensembl chr10:77,790,791...77,926,755
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO (MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:5699497 NCBI chr 8:94,641,174...94,707,466
Ensembl chr 8:94,641,074...94,707,466
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699497|PMID:26371508) Ensembl
Ensembl
MGI
PMID:26371508 GO_REF:0000107 MGI:5699497 NCBI chr16:68,229,033...68,236,127
Ensembl chr16:68,229,033...68,238,102
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5912649|PMID:28859094) Ensembl
Ensembl
MGI
PMID:28859094 GO_REF:0000107 MGI:5912649 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826
JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1309706|PMID:9784490)
(MGI:3578606|PMID:15800000)
(MGI:3716020|PMID:17560563)
(MGI:1101385|PMID:9428423), (MGI:3609523|PMID:16169547), (MGI:3613102|PMID:16375885)
(MGI:1327513|PMID:9916808)
MGI
Ensembl
PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 More... GO_REF:0000107 MGI:1101385 MGI:1309706 MGI:1327513 MGI:3578606 MGI:3609523 MGI:3613102 MGI:3716020 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:5523405 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3579763|PMID:15668254) Ensembl
Ensembl
MGI
PMID:15668254 GO_REF:0000107 MGI:3579763 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:3579763 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,580,998...22,585,455
JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2135612|PMID:11493558) Ensembl
Ensembl
MGI
PMID:11493558 GO_REF:0000107 MGI:2135612 NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422
JBrowse link
G HHIP hedgehog interacting protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450020|PMID:12569124) Ensembl
Ensembl
MGI
PMID:12569124 GO_REF:0000107 MGI:2450020 NCBI chr 4:144,646,156...144,745,271
Ensembl chr 4:144,646,156...144,745,271
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:5638831 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1195049|PMID:9441679) Ensembl
Ensembl
MGI
PMID:9441679 GO_REF:0000107 MGI:1195049 NCBI chr 7:27,141,052...27,143,681
Ensembl chr 7:27,141,052...27,143,681
JBrowse link
G KRAS KRAS proto-oncogene, GTPase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5523405|PMID:24058167) Ensembl
Ensembl
MGI
PMID:24058167 GO_REF:0000107 MGI:5523405 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2156962|PMID:11798066), (MGI:80991|PMID:1907584) Ensembl
Ensembl
MGI
PMID:1907584 PMID:11798066 GO_REF:0000107 MGI:2156962 MGI:80991 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEP (PMID:8675988) UniProt
UniProt
PMID:8675988 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3774879|PMID:18256198) Ensembl
Ensembl
MGI
PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr 8:107,899,316...108,083,620
Ensembl chr 8:107,899,316...108,083,642
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1277744|PMID:9731532), (MGI:1346236|PMID:10500184) RGD
Ensembl
MGI
PMID:8769111 PMID:9731532 PMID:10500184 GO_REF:0000107 MGI:1277744 MGI:1346236 RGD:2306315 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:3795352 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5523405|PMID:24058167) Ensembl
Ensembl
MGI
PMID:24058167 GO_REF:0000107 MGI:5523405 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within
involved_in
ISS
IEA
UniProt
Ensembl
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683859|PMID:14676301) Ensembl
Ensembl
MGI
PMID:14676301 GO_REF:0000107 MGI:2683859 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4361775|PMID:19805295)
(MGI:4360856|PMID:19686689)
Ensembl
Ensembl
MGI
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSMD1 CUB and Sushi multiple domains 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6369467|PMID:31604923) Ensembl
Ensembl
MGI
PMID:31604923 GO_REF:0000107 MGI:6369467 NCBI chr 8:2,935,361...4,994,914
Ensembl chr 8:2,935,353...4,994,972
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1926565|PMID:10919287) Ensembl
Ensembl
MGI
PMID:10919287 GO_REF:0000107 MGI:1926565 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G VDR vitamin D receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3051725|PMID:15178742) Ensembl
Ensembl
MGI
PMID:15178742 GO_REF:0000107 MGI:3051725 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1336843|PMID:10331984), (MGI:3703920|PMID:17369357) Ensembl
Ensembl
MGI
PMID:10331984 PMID:17369357 GO_REF:0000107 MGI:1336843 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (MGI:1859522|PMID:11015591) MGI PMID:11015591 MGI:1859522 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877
JBrowse link
G PHB2 prohibitin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3695669|PMID:17065319) Ensembl
Ensembl
MGI
PMID:17065319 GO_REF:0000107 MGI:3695669 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,780
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3814777|PMID:18614704) Ensembl
Ensembl
MGI
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10706139), (PMID:17118062) UniProt
UniProt
PMID:10706139 PMID:17118062 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNF tumor necrosis factor involved_in IDA (PMID:17350185) UniProt
UniProt
PMID:17350185 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
(PMID:12141440), (PMID:17118062)
(MGI:4949995|PMID:21281623)
UniProt
Ensembl
UniProt
MGI
PMID:12141440 PMID:17118062 PMID:21281623 GO_REF:0000107 MGI:4949995 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISS
Ensembl
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISS
Ensembl
Ensembl
UniProt
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
positive regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G MDK midkine involved_in IMP (PMID:19060126) UniProt
UniProt
PMID:19060126 NCBI chr11:46,380,784...46,383,837
Ensembl chr11:46,380,756...46,383,837
JBrowse link
G SIRT6 sirtuin 6 involved_in IMP (PMID:23201774) BHF-UCL
BHF-UCL
PMID:23201774 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3801531|PMID:18533146) Ensembl
Ensembl
MGI
PMID:18533146 GO_REF:0000107 MGI:3801531 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chr 4:54,229,293...54,298,245
Ensembl chr 4:54,229,280...54,298,245
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IDA (PMID:18607644) UniProt
UniProt
PMID:18607644 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IBA
IEA
IDA
(PMID:21873635)
(PMID:17229286), (PMID:8657307)
GO_Central
Ensembl
GO_Central
UniProt
UniProt
PMID:8657307 PMID:17229286 PMID:21873635 GO_REF:0000107 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714585|PMID:17522159)
(MGI:4949995|PMID:21281623)
Ensembl
Ensembl
MGI
PMID:17522159 PMID:21281623 GO_REF:0000107 MGI:3714585 MGI:4949995 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106
JBrowse link
G HOXB7 homeobox B7 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:48,607,232...48,611,017
Ensembl chr17:48,607,232...48,633,572
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G MAGED1 MAGE family member D1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:51,803,076...51,902,354
Ensembl chr  X:51,803,007...51,902,354
JBrowse link
G NOG noggin involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611
JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4949995|PMID:21281623) UniProt
Ensembl
UniProt
MGI
PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:4949995 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SIX4 SIX homeobox 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351
JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr16:981,770...986,979
Ensembl chr16:981,770...986,979
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2150217|PMID:11507767) Ensembl
Ensembl
MGI
PMID:11507767 GO_REF:0000107 MGI:2150217 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3703395|PMID:16364283) MGI PMID:16364283 MGI:3703395 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709664|PMID:17473173) Ensembl
Ensembl
MGI
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKBPL FKBP prolyl isomerase like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699248|PMID:25767277) Ensembl
MGI
Ensembl
PMID:25767277 GO_REF:0000107 MGI:5699248 NCBI chr 6:32,128,707...32,130,288
Ensembl chr 6:32,128,707...32,130,288
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SIX4 SIX homeobox 4 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5523731|PMID:24191021) Ensembl
Ensembl
MGI
PMID:24191021 GO_REF:0000107 MGI:5523731 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3830397|PMID:19164602) Ensembl
Ensembl
MGI
PMID:19164602 GO_REF:0000107 MGI:3830397 NCBI chr 3:8,733,802...8,746,758
Ensembl chr 3:8,733,802...8,841,808
JBrowse link
G ETV5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO (MGI:2667785|PMID:12871699) MGI PMID:12871699 MGI:2667785 NCBI chr 3:186,046,314...186,109,089
Ensembl chr 3:186,046,314...186,110,318
JBrowse link
G PHB2 prohibitin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3695669|PMID:17065319) Ensembl
Ensembl
MGI
PMID:17065319 GO_REF:0000107 MGI:3695669 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,780
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:45,005,182...45,009,452
Ensembl chr 2:45,005,182...45,009,452
JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683859|PMID:14676301) Ensembl
Ensembl
MGI
PMID:14676301 GO_REF:0000107 MGI:2683859 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G PGR progesterone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1354852|PMID:10733525) Ensembl
Ensembl
MGI
PMID:10733525 GO_REF:0000107 MGI:1354852 NCBI chr11:101,029,624...101,129,813
Ensembl chr11:101,029,624...101,129,813
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1354852|PMID:10733525) Ensembl
Ensembl
MGI
PMID:10733525 GO_REF:0000107 MGI:1354852 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19643
    developmental process 7530
      anatomical structure morphogenesis 3224
        tube morphogenesis 1099
          branching morphogenesis of an epithelial tube 198
            branching involved in blood vessel morphogenesis + 44
            branching involved in lymph vessel morphogenesis 2
            branching involved in mammary gland duct morphogenesis + 30
            branching involved in open tracheal system development + 0
            branching involved in ureteric bud morphogenesis + 69
            epithelial tube branching involved in lung morphogenesis + 40
            tube fusion + 0
Path 2
Term Annotations click to browse term
  biological_process 19643
    developmental process 7530
      anatomical structure development 6889
        tissue development 2398
          epithelium development 1481
            morphogenesis of an epithelium 651
              epithelial tube morphogenesis 419
                branching morphogenesis of an epithelial tube 198
                  branching involved in blood vessel morphogenesis + 44
                  branching involved in lymph vessel morphogenesis 2
                  branching involved in mammary gland duct morphogenesis + 30
                  branching involved in open tracheal system development + 0
                  branching involved in ureteric bud morphogenesis + 69
                  epithelial tube branching involved in lung morphogenesis + 40
                  tube fusion + 0
paths to the root