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ONTOLOGY REPORT - ANNOTATIONS

Term:smooth muscle tissue development
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Accession:GO:0048745 term browser browse the term
Definition:The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.


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smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
IEA
ISS		 (PMID:17850284)
(PMID:12631064)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12631064 PMID:17850284 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3699270 (PMID:17172448)
GO_REF:0000107		 RGD
Ensembl		 PMID:17172448 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Eng endoglin involved_in ISO (PMID:10348742) RGD PMID:10348742 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO
IEA		 (PMID:30233597)
GO_REF:0000107		 RGD
Ensembl		 PMID:30233597 GO_REF:0000107 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:2148705 (PMID:17428829) RGD PMID:17428829 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO
IEA		 MGI:1914004 (PMID:17428829)
GO_REF:0000107		 RGD
Ensembl		 PMID:17428829 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1934258 (PMID:10821773)
GO_REF:0000107		 RGD
Ensembl		 PMID:10821773 GO_REF:0000107 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Itga8 integrin subunit alpha 8 involved_in ISO
IEA		 (PMID:21335239)
GO_REF:0000107		 RGD
Ensembl		 PMID:21335239 GO_REF:0000107 NCBI chr17:80,213,139...80,410,633
Ensembl chr17:75,304,008...75,501,510 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:1857444 (PMID:7926784)		 HGNC-UCL
Ensembl
RGD		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3774275 (PMID:32901096)		 Ensembl
RGD		 PMID:32901096 GO_REF:0000107 NCBI chr 5:62,678,197...62,697,360
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta acts_upstream_of_or_within ISO MGI:2135508 (PMID:17143286) RGD PMID:17143286 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Ptch1 patched 1 involved_in ISO
IEA		 (PMID:17850284)
GO_REF:0000107		 RGD
Ensembl		 PMID:17850284 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3526869 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 2:152,127,171...152,888,587
Ensembl chr 2:152,126,953...152,888,585 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO		 GO_REF:0000107
(PMID:17850284)		 Ensembl
RGD		 PMID:17850284 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO
IEA		 (PMID:17850284)
GO_REF:0000107		 RGD
Ensembl		 PMID:17850284 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA		 (PMID:17273977)
GO_REF:0000107		 RGD
Ensembl		 PMID:17273977 GO_REF:0000107 NCBI chr 8:67,444,757...67,464,719
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISO
IEA		 MGI:2180473 (PMID:18635823)
GO_REF:0000107		 RGD
Ensembl		 PMID:18635823 GO_REF:0000107 NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO
IEA		 MGI:3526866 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 2:152,063,769...152,090,414
Ensembl chr 2:149,753,682...149,780,327 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO MGI:3810527 (PMID:18776146) RGD PMID:18776146 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
G Zfand5 zinc finger AN1-type containing 5 acts_upstream_of_or_within ISO
IEA		 MGI:3526860 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:218,765,735...218,780,391
Ensembl chr 1:218,766,614...218,775,843 		JBrowse link
G Zfp950 zinc finger protein 950 acts_upstream_of_or_within ISO
IEA		 MGI:3526859 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:260,248,231...260,265,211
Ensembl chr 1:260,236,599...260,265,254 		JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:21071432) RGD PMID:21071432 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO
IEA		 (PMID:26178373), (PMID:26711913)
GO_REF:0000107		 RGD
Ensembl		 PMID:26178373 PMID:26711913 GO_REF:0000107 NCBI chr 1:212,211,057...212,218,739
Ensembl chr 1:202,781,665...202,789,414 		JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO MGI:2676830 (PMID:19816508) RGD PMID:19816508 NCBI chr18:57,371,349...57,371,453
Ensembl chr18:55,101,006...55,101,110 		JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO MGI:2676828 (PMID:19816508) RGD PMID:19816508 NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
G Mylk myosin light chain kinase involved_in ISO
IEA		 (PMID:21055718)
GO_REF:0000107		 RGD
Ensembl		 PMID:21055718 GO_REF:0000107 NCBI chr11:79,288,243...79,535,450
Ensembl chr11:65,783,008...66,030,261 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:19091769)
GO_REF:0000107		 RGD
Ensembl		 PMID:19091769 GO_REF:0000107 NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (PMID:18776146) RGD PMID:18776146 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
lung smooth muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO
IEA		 MGI:2429649 (PMID:24218621)
GO_REF:0000107		 RGD
Ensembl		 PMID:24218621 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO
IEA		 MGI:3522206 (PMID:24218621)
GO_REF:0000107		 RGD
Ensembl		 PMID:24218621 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12399320)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12399320)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:12399320)		 Ensembl
UniProt
RGD		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12399320)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
regulation of smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnn tenascin N involved_in ISO
IEA		 (PMID:14709716)
GO_REF:0000107		 RGD
Ensembl		 PMID:14709716 GO_REF:0000107 NCBI chr13:74,852,586...74,919,789
Ensembl chr13:72,319,155...72,408,156 		JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:2655195 (PMID:20110314)
GO_REF:0000107		 RGD
Ensembl		 PMID:20110314 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO
IEA		 MGI:2176205|MGI:2385468 (PMID:20881014)
GO_REF:0000107		 RGD
Ensembl		 PMID:20881014 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (PMID:18776146) RGD PMID:18776146 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        tissue development 2321
          muscle tissue development 536
            smooth muscle tissue development 33
              aorta smooth muscle tissue morphogenesis 6
              kidney smooth muscle tissue development + 4
              lung smooth muscle development 2
              negative regulation of smooth muscle tissue development 0
              positive regulation of smooth muscle tissue development 0
              regulation of smooth muscle tissue development + 1
              ureter smooth muscle development + 4
paths to the root