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ONTOLOGY REPORT - ANNOTATIONS

Term:smooth muscle tissue development
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Accession:GO:0048745 term browser browse the term
Definition:The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.


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smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841 		JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:17428829) MGI PMID:17428829 NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892 		JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:31,335,102...31,890,523
Ensembl chr18:31,335,264...31,888,845 		JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G ITGA8 integrin subunit alpha 8 involved_in ISO (PMID:21335239) BHF-UCL PMID:21335239 NCBI chr10:46,132,887...46,303,659
Ensembl chr10:46,132,913...46,303,343 		JBrowse link
G LOC100514494 schwannomin-interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:98,858,981...99,633,023
Ensembl chr13:99,067,716...99,633,024 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:7926784) MGI PMID:7926784 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,011...59,347,266 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,745,653...44,774,563
Ensembl chr 7:44,745,827...44,770,606 		JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:96,496,386...96,524,879
Ensembl chr13:96,496,439...96,525,777 		JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO (PMID:18776146) MGI PMID:18776146 NCBI chr 6:41,345,466...41,429,239
Ensembl chr 6:41,345,470...41,423,700 		JBrowse link
G ZFAND5 zinc finger AN1-type containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:225,703,027...225,714,522
Ensembl chr 1:225,703,200...225,714,365 		JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:21071432) BHF-UCL PMID:21071432 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:6,455,155...6,463,493
Ensembl chr 2:6,450,332...6,463,486 		JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (PMID:19816508) MGI PMID:19816508 NCBI chr 2:150,578,738...150,578,817
Ensembl chr 2:150,578,738...150,578,817 		JBrowse link
G MIR145 microRNA mir-145 acts_upstream_of_or_within ISO (PMID:19816508) MGI PMID:19816508 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G MYLK myosin light chain kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:136,509,878...136,809,674
Ensembl chr13:136,509,755...136,809,668 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (PMID:18776146) UniProt PMID:18776146 NCBI chr 6:41,345,466...41,429,239
Ensembl chr 6:41,345,470...41,423,700 		JBrowse link
lung smooth muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932 		JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
regulation of smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNN tenascin N involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:117,174,743...117,244,041
Ensembl chr 9:117,137,250...117,243,815 		JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX1 SIX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (PMID:18776146) UniProt PMID:18776146 NCBI chr 6:41,345,466...41,429,239
Ensembl chr 6:41,345,470...41,423,700 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18944
    developmental process 6794
      anatomical structure development 6375
        tissue development 2241
          muscle tissue development 515
            smooth muscle tissue development 32
              aorta smooth muscle tissue morphogenesis 6
              kidney smooth muscle tissue development + 4
              lung smooth muscle development 2
              negative regulation of smooth muscle tissue development 0
              positive regulation of smooth muscle tissue development 0
              regulation of smooth muscle tissue development + 1
              ureter smooth muscle development + 4
paths to the root