Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle tissue development
go back to main search page
Accession:GO:0048745 term browser browse the term
Definition:The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.



show annotations for term's descendants           Sort by:
 
smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:3794480|PMID:16443691) DFLAT PMID:16443691 MGI:3794480 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO (PMID:17850284)
(MGI:2655937|PMID:12631064)
UniProt PMID:12631064 PMID:17850284 MGI:2655937 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (MGI:3699022|PMID:17172448) MGI PMID:17172448 MGI:3699022 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397
JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655
JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1858523|PMID:10821773) MGI PMID:10821773 MGI:1858523 NCBI chr37:25,616,942...25,622,989 JBrowse link
G ITGA8 integrin subunit alpha 8 involved_in ISO (MGI:4947862|PMID:21335239) BHF-UCL PMID:21335239 MGI:4947862 NCBI chr 2:21,034,630...21,244,304
Ensembl chr 2:21,075,653...21,241,951
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382
JBrowse link
G PDGFRB platelet derived growth factor receptor beta acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283
JBrowse link
G PTCH1 patched 1 involved_in ISO (PMID:17850284) UniProt PMID:17850284 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISO (PMID:17850284) UniProt PMID:17850284 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) DFLAT PMID:17273977 NCBI chr30:37,331,834...37,359,449
Ensembl chr30:37,331,832...37,353,529
JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in ISO (MGI:4359353|PMID:18635823) MGI PMID:18635823 MGI:4359353 NCBI chr12:18,544,176...18,574,300
Ensembl chr12:18,544,446...18,572,902
JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr23:50,253,645...50,279,615
Ensembl chr23:50,249,327...50,280,144
JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:3703103|PMID:17079275) MGI PMID:17079275 MGI:3703103 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO (MGI:3806378|PMID:18776146) MGI PMID:18776146 MGI:3806378 NCBI chr 1:120,388,125...120,471,185
Ensembl chr 1:120,388,107...120,456,185
JBrowse link
G ZFAND5 zinc finger AN1-type containing 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3696608|PMID:17143286) Ensembl
MGI
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr 1:85,420,091...85,429,843
Ensembl chr 1:85,420,127...85,428,424
JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain involved_in ISO (MGI:5307011|PMID:21071432) BHF-UCL PMID:21071432 MGI:5307011 NCBI chr36:30,488,250...30,526,367
Ensembl chr36:30,488,488...30,536,765
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:6158865|PMID:26711913) UniProt PMID:26178373 PMID:26711913 MGI:5660411 MGI:6158865 NCBI chr18:51,389,797...51,396,109
Ensembl chr18:51,389,824...51,396,107
JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (MGI:4443305|PMID:19816508) MGI PMID:19816508 MGI:4443305 NCBI chr 4:59,534,535...59,534,589
Ensembl chr 4:59,534,535...59,534,594
JBrowse link
G MIR145 microRNA mir-145 acts_upstream_of_or_within ISO (MGI:4443305|PMID:19816508) MGI PMID:19816508 MGI:4443305 NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210
JBrowse link
G MYLK myosin light chain kinase involved_in ISO (PMID:21055718) BHF-UCL PMID:21055718 NCBI chr33:26,663,991...26,867,370
Ensembl chr33:26,664,800...26,843,181
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr 1:120,388,125...120,471,185
Ensembl chr 1:120,388,107...120,456,185
JBrowse link
lung smooth muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:5524169|PMID:24218621) MGI PMID:24218621 MGI:5524169 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5524169|PMID:24218621) Ensembl
MGI
PMID:24218621 GO_REF:0000107 MGI:5524169 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437379|PMID:20110314) Ensembl
MGI
PMID:20110314 GO_REF:0000107 MGI:4437379 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:4848001|PMID:20881014) MGI PMID:20881014 MGI:4848001 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr 1:120,388,125...120,471,185
Ensembl chr 1:120,388,107...120,456,185
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13875
    developmental process 6148
      anatomical structure development 5720
        tissue development 1966
          muscle tissue development 470
            smooth muscle tissue development 30
              aorta smooth muscle tissue morphogenesis 6
              kidney smooth muscle tissue development + 4
              lung smooth muscle development 2
              negative regulation of smooth muscle tissue development 0
              positive regulation of smooth muscle tissue development 0
              regulation of smooth muscle tissue development + 0
              ureter smooth muscle development + 5
paths to the root