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ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle tissue development
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Accession:GO:0048745 term browser browse the term
Definition:The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.



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smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3699022|PMID:17172448) MGI
Ensembl
PMID:17172448 GO_REF:0000107 MGI:3699022 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987
JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,934,080...98,973,862
Ensembl chr 9:127,605,608...127,644,641
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6453688|PMID:30233597) MGI
Ensembl
PMID:30233597 GO_REF:0000107 MGI:6453688 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397
JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893
JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1858523|PMID:10821773) MGI
Ensembl
PMID:10821773 GO_REF:0000107 MGI:1858523 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
JBrowse link
G ITGA8 integrin subunit alpha 8 involved_in ISO (MGI:4947862|PMID:21335239) BHF-UCL PMID:21335239 MGI:4947862 NCBI chr10:15,838,320...16,045,206
Ensembl chr10:16,114,999...16,321,360
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:66069|PMID:7926784) MGI
Ensembl
PMID:7926784 GO_REF:0000107 MGI:66069 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295
JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,642,534...35,660,210
Ensembl chr 9:36,445,576...36,462,637
JBrowse link
G PDGFRB platelet derived growth factor receptor beta acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453
JBrowse link
G SCHIP1 schwannomin interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3696608|PMID:17143286) MGI
Ensembl
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr 3:156,307,829...156,919,728
Ensembl chr 3:164,837,723...164,968,769
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:53,117,891...53,150,790
Ensembl chr15:72,741,482...72,770,876
JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,376,157...50,406,740
Ensembl chr 6:51,635,899...51,664,691
JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3696608|PMID:17143286) MGI
Ensembl
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr 3:153,730,307...153,762,442
Ensembl chr 3:161,783,999...161,816,525
JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:3703103|PMID:17079275) MGI PMID:17079275 MGI:3703103 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO (MGI:3806378|PMID:18776146) MGI PMID:18776146 MGI:3806378 NCBI chr19:28,195,740...28,270,265
Ensembl chr19:36,946,685...37,021,531
JBrowse link
G ZFAND5 zinc finger AN1-type containing 5 acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr 9:52,446,788...52,457,527
Ensembl chr 9:71,144,900...71,154,869
JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain involved_in ISO (MGI:5307011|PMID:21071432) BHF-UCL PMID:21071432 MGI:5307011 NCBI chr2B:76,285,115...76,322,703
Ensembl chr2B:194,204,613...194,242,956
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:6158865|PMID:26711913) UniProt PMID:26178373 PMID:26711913 MGI:5660411 MGI:6158865 NCBI chr11:61,226,755...61,233,181
Ensembl chr11:64,555,877...64,561,950
JBrowse link
G MYLK myosin light chain kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:120,711,705...120,983,432
Ensembl chr 3:127,614,173...127,793,261
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr19:28,195,740...28,270,265
Ensembl chr19:36,946,685...37,021,531
JBrowse link
lung smooth muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:5524169|PMID:24218621) MGI PMID:24218621 MGI:5524169 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SRF serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5524169|PMID:24218621) MGI
Ensembl
PMID:24218621 GO_REF:0000107 MGI:5524169 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768
JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
regulation of smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNN tenascin N involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:150,580,248...150,661,687
Ensembl chr 1:154,278,714...154,357,823
JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4437379|PMID:20110314) MGI
Ensembl
PMID:20110314 GO_REF:0000107 MGI:4437379 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:4848001|PMID:20881014) MGI PMID:20881014 MGI:4848001 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr19:28,195,740...28,270,265
Ensembl chr19:36,946,685...37,021,531
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16295
    developmental process 6526
      anatomical structure development 6136
        tissue development 2182
          muscle tissue development 497
            smooth muscle tissue development 31
              aorta smooth muscle tissue morphogenesis 4
              kidney smooth muscle tissue development + 4
              lung smooth muscle development 2
              negative regulation of smooth muscle tissue development 0
              positive regulation of smooth muscle tissue development 0
              regulation of smooth muscle tissue development + 1
              ureter smooth muscle development + 4
paths to the root