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ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic skeletal system development
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Accession:GO:0048706 term browser browse the term
Definition:The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure.
Synonyms:exact_synonym: embryonic skeletal development


show annotations for term's descendants           Sort by:
embryonic skeletal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2A activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:71660|PMID:7885474) Ensembl
Ensembl
MGI		 PMID:7885474 GO_REF:0000107 MGI:71660 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1932296|PMID:11290297) MGI
Ensembl		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr10:52,586,089...52,596,154
Ensembl chr10:52,586,509...52,596,564 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (MGI:5912686|PMID:28817564) MGI PMID:28817564 MGI:5912686 NCBI chr14:15,582...24,102 JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G DEAF1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chr 2:404,514...427,584
Ensembl chr 2:404,533...427,542 		JBrowse link
G DLK1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (MGI:3838429|PMID:19247431) MGI PMID:19247431 MGI:3838429 NCBI chr 7:121,565,844...121,577,493
Ensembl chr 7:121,565,854...121,576,654 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:87771|PMID:9187081) Ensembl
Ensembl
MGI		 PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr15:78,186,667...78,191,788
Ensembl chr15:78,185,790...78,191,226 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:87771|PMID:9187081) MGI
Ensembl		 PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr15:78,200,696...78,204,264
Ensembl chr15:78,200,916...78,204,112 		JBrowse link
G DMRT2 doublesex and mab-3 related transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3613100|PMID:16387292) Ensembl
Ensembl
MGI		 PMID:16387292 GO_REF:0000107 MGI:3613100 NCBI chr 1:220,745,493...220,799,779
Ensembl chr 1:220,745,502...220,757,324 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 8:81,210,750...81,279,053
Ensembl chr 8:81,209,327...81,276,853 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3716021|PMID:17544391) MGI
Ensembl
Ensembl		 PMID:17544391 GO_REF:0000107 MGI:3716021 NCBI chr11:1,554,648...1,581,938
Ensembl chr11:1,554,763...1,582,408 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3710451|PMID:17504941) MGI PMID:17504941 MGI:3710451 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,459,971...16,462,207 		JBrowse link
G HOXA2 homeobox A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G HOXA3 homeobox A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:67616|PMID:7913519) MGI
Ensembl		 PMID:7913519 GO_REF:0000107 MGI:67616 NCBI chr18:45,421,542...45,467,803
Ensembl chr18:45,454,213...45,466,537 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3720535|PMID:17626057) Ensembl
MGI		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G HOXA6 homeobox A6 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057) MGI PMID:17626057 MGI:3720535 NCBI chr18:45,423,530...45,429,947 JBrowse link
G HOXA9 homeobox A9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78984|PMID:8625797)
(MGI:85243|PMID:9013929)
(MGI:3720535|PMID:17626057)		 MGI
Ensembl		 PMID:8625797 PMID:9013929 PMID:17626057 GO_REF:0000107 MGI:3720535 MGI:78984 MGI:85243 NCBI chr18:45,404,594...45,411,512
Ensembl chr18:45,408,375...45,411,509 		JBrowse link
G HOXB5 homeobox B5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057) MGI
Ensembl		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr12:24,845,224...24,849,639
Ensembl chr12:24,845,225...24,847,918 		JBrowse link
G HOXB6 homeobox B6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:70296|PMID:7828847)
(MGI:3720535|PMID:17626057)		 MGI
Ensembl		 PMID:7828847 PMID:17626057 GO_REF:0000107 MGI:3720535 MGI:70296 NCBI chr12:24,849,741...24,853,494
Ensembl chr12:24,849,742...24,852,286 		JBrowse link
G HOXB9 homeobox B9 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:24,875,723...24,880,333 JBrowse link
G HOXC5 homeobox C5 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057) MGI PMID:17626057 MGI:3720535 NCBI chr 5:19,245,857...19,248,183
Ensembl chr 5:19,245,851...19,248,172 		JBrowse link
G HOXC6 homeobox C6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3720535|PMID:17626057) Ensembl
Ensembl
MGI		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr 5:19,230,227...19,243,522
Ensembl chr 5:19,229,594...19,243,652 		JBrowse link
G HOXC9 homeobox C9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057) MGI
Ensembl		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr 5:19,212,490...19,215,859
Ensembl chr 5:19,212,905...19,215,984 		JBrowse link
G HOXD1 homeobox D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2137767|PMID:11511348) Ensembl
Ensembl
MGI		 PMID:11511348 GO_REF:0000107 MGI:2137767 NCBI chr15:81,987,618...81,990,026
Ensembl chr15:81,987,769...81,990,134 		JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78984|PMID:8625797)
(MGI:3720535|PMID:17626057)		 MGI
Ensembl		 PMID:8625797 PMID:17626057 GO_REF:0000107 MGI:3720535 MGI:78984 NCBI chr15:81,910,415...81,926,276
Ensembl chr15:81,924,142...81,926,274 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 acts_upstream_of_or_within ISO (MGI:5050793|PMID:21515572) MGI PMID:21515572 MGI:5050793 NCBI chr 4:87,720,747...87,743,037
Ensembl chr 4:87,720,118...87,742,992 		JBrowse link
G KIAA1217 KIAA1217 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:50,706,713...51,032,010
Ensembl chr10:50,707,054...51,205,619 		JBrowse link
G MBTD1 mbt domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4939865|PMID:21252303) Ensembl
Ensembl
MGI		 PMID:21252303 GO_REF:0000107 MGI:4939865 NCBI chr12:27,450,809...27,526,412
Ensembl chr12:27,450,806...27,526,194 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4868517|PMID:21045211) Ensembl
Ensembl
MGI		 PMID:21045211 GO_REF:0000107 MGI:4868517 NCBI chr12:34,499,139...34,512,191
Ensembl chr12:34,499,142...34,512,187 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1347483|PMID:10572046)
(MGI:1343724|PMID:10449756)		 Ensembl
Ensembl
MGI		 PMID:10449756 PMID:10572046 GO_REF:0000107 MGI:1343724 MGI:1347483 NCBI chr 8:9,179,061...9,183,340
Ensembl chr 8:9,179,232...9,182,892 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:79520|PMID:8631261) MGI PMID:8631261 MGI:79520 NCBI chr 6:77,160,827...77,268,626
Ensembl chr 6:77,161,097...77,267,415 		JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2151355|PMID:11566859) Ensembl
MGI		 PMID:11566859 GO_REF:0000107 MGI:2151355 NCBI chr 4:85,824,590...86,170,328
Ensembl chr 4:85,824,666...86,170,191 		JBrowse link
G PCGF2 polycomb group ring finger 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1932296|PMID:11290297) MGI
Ensembl		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr12:23,362,631...23,375,779
Ensembl chr12:23,362,654...23,375,775 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:228,854,587...229,308,054
Ensembl chr 1:228,854,595...229,308,906 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,037,464...105,044,765 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:72077|PMID:7743923) UniProt PMID:7743923 MGI:72077 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3710451|PMID:17504941) Ensembl
MGI		 PMID:17504941 GO_REF:0000107 MGI:3710451 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SLC35D1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (MGI:3771453|PMID:17952091) MGI PMID:17952091 MGI:3771453 NCBI chr 6:145,532,600...145,596,069
Ensembl chr 6:145,533,537...145,596,066 		JBrowse link
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chr 5:18,588,763...18,633,177
Ensembl chr 5:18,588,758...18,630,089 		JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3717030|PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 MGI:3717030 NCBI chr15:79,935,986...79,990,139
Ensembl chr15:79,935,994...80,025,850 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA
ISS		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr17:49,663,721...49,805,118
Ensembl chr17:49,663,731...49,804,577 		JBrowse link
G TAPT1 transmembrane anterior posterior transformation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3758514|PMID:17151244) Ensembl
Ensembl
MGI		 PMID:17151244 GO_REF:0000107 MGI:3758514 NCBI chr 8:11,365,423...11,415,699
Ensembl chr 8:11,365,432...11,416,488 		JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:64493|PMID:8293872) Ensembl
MGI		 PMID:8293872 GO_REF:0000107 MGI:64493 NCBI chr 1:2,717,165...2,725,561
Ensembl chr 1:2,717,165...2,725,601 		JBrowse link
G UCMA upper zone of growth plate and cartilage matrix associated involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr10:48,460,713...48,471,213
Ensembl chr10:48,460,688...48,471,286 		JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:10,413,182...10,435,158
Ensembl chr 9:10,413,263...10,435,100 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISO (MGI:5544658|PMID:24161523) UniProt PMID:24161523 MGI:5544658 NCBI chr 3:27,158,438...27,492,629
Ensembl chr 3:27,158,878...27,492,762 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX3 ALX homeobox 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:110,047,254...110,058,205
Ensembl chr 4:110,047,116...110,057,872 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1095762|PMID:9268572) Ensembl
Ensembl
MGI		 PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:76977|PMID:7590232) Ensembl
Ensembl
MGI		 PMID:7590232 GO_REF:0000107 MGI:76977 NCBI chr15:78,200,696...78,204,264
Ensembl chr15:78,200,916...78,204,112 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IEA
ISS		 Ensembl
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:2,285,679...2,311,750
Ensembl chr12:2,285,579...2,313,874 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:86990|PMID:9106663) MGI
Ensembl		 PMID:9106663 GO_REF:0000107 MGI:86990 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3713422|PMID:17525797) MGI PMID:17525797 MGI:3713422 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G GNAS GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3619837|PMID:15797856) Ensembl
Ensembl
MGI		 PMID:15797856 GO_REF:0000107 MGI:3619837 NCBI chr17:58,985,580...59,053,022
Ensembl chr17:58,998,981...59,053,021 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4943100|PMID:21377456) Ensembl
Ensembl
MGI		 PMID:21377456 GO_REF:0000107 MGI:4943100 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5505384|PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chr 3:40,309,298...40,372,139
Ensembl chr 3:40,309,635...40,372,135 		JBrowse link
G IRX5 iroquois homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,511,263...30,515,015
Ensembl chr 6:30,511,894...30,514,808 		JBrowse link
G MMP14 matrix metallopeptidase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3771253|PMID:18022611) MGI
Ensembl		 PMID:18022611 GO_REF:0000107 MGI:3771253 NCBI chr 7:76,174,502...76,185,931
Ensembl chr 7:76,172,971...76,185,928 		JBrowse link
G MMP16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3771253|PMID:18022611) Ensembl
Ensembl
MGI		 PMID:18022611 GO_REF:0000107 MGI:3771253 NCBI chr 4:48,556,826...48,867,959
Ensembl chr 4:48,556,967...48,862,985 		JBrowse link
G NIPBL NIPBL cohesin loading factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4367301|PMID:19763162) MGI
Ensembl		 PMID:19763162 GO_REF:0000107 MGI:4367301 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,469...22,363,821 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2155575|PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G PAX5 paired box 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5476374|PMID:23349049) Ensembl
Ensembl
MGI		 PMID:23349049 GO_REF:0000107 MGI:5476374 NCBI chr 1:237,574,938...237,785,454
Ensembl chr 1:237,575,061...237,785,413 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IBA
IEA		 (PMID:21873635) GO_Central
GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within ISO (MGI:73363|PMID:7758948)
(MGI:1306737|PMID:9729491)		 MGI PMID:7758948 PMID:9729491 MGI:1306737 MGI:73363 NCBI chr 4:80,427,682...80,502,689
Ensembl chr 4:80,427,687...80,501,646 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491) MGI PMID:9729491 MGI:1306737 NCBI chr 1:269,853,134...269,902,808
Ensembl chr 1:269,853,200...269,903,469 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3042355|PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4431136|PMID:20133625) Ensembl
Ensembl
MGI		 PMID:20133625 GO_REF:0000107 MGI:4431136 NCBI chr13:29,884,708...29,996,285
Ensembl chr13:29,884,719...29,996,359 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:4822095|PMID:20515681) UniProt
UniProt
Ensembl
MGI		 PMID:20515681 GO_REF:0000024 GO_REF:0000107 MGI:4822095 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G SIX2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4822095|PMID:20515681) Ensembl
Ensembl
MGI		 PMID:20515681 GO_REF:0000107 MGI:4822095 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,945...95,463,251 		JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4822095|PMID:20515681) Ensembl
Ensembl
MGI		 PMID:20515681 GO_REF:0000107 MGI:4822095 NCBI chr 1:189,670,390...189,682,378
Ensembl chr 1:189,670,390...189,682,577 		JBrowse link
G SLC39A1 solute carrier family 39 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3624433|PMID:16652366) Ensembl
Ensembl
MGI		 PMID:16652366 GO_REF:0000107 MGI:3624433 NCBI chr 4:95,729,480...95,733,824
Ensembl chr 4:95,729,347...95,733,819 		JBrowse link
G SLC39A3 solute carrier family 39 member 3 acts_upstream_of_or_within ISO (MGI:3624433|PMID:16652366) MGI PMID:16652366 MGI:3624433 NCBI chr 2:75,908,451...75,916,877 JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3618021|PMID:15183723) Ensembl
Ensembl
MGI		 PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3618021|PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:3050165|PMID:15190012) MGI PMID:15190012 MGI:3050165 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G TBX15 T-box transcription factor 15 acts_upstream_of_or_within ISO (MGI:3604843|PMID:15728667) MGI PMID:15728667 MGI:3604843 NCBI chr 4:101,918,891...102,032,280 JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within
involved_in		 ISO
ISS		 (MGI:80520|PMID:8622765) MGI
UniProt		 PMID:8622765 GO_REF:0000024 MGI:80520 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3701721|PMID:16806156) Ensembl
Ensembl
MGI		 PMID:16806156 GO_REF:0000107 MGI:3701721 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042355|PMID:15030764) MGI
Ensembl		 PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:3042355|PMID:15030764) MGI PMID:15030764 MGI:3042355 NCBI chr15:138,228,640...138,276,341
Ensembl chr15:138,228,807...138,229,289 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5314316|PMID:22228095) Ensembl
Ensembl
MGI		 PMID:22228095 GO_REF:0000107 MGI:5314316 NCBI chr 8:30,453,969...30,553,699
Ensembl chr 8:30,463,862...30,553,703 		JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3696935|PMID:16998816)
(MGI:3588895|PMID:16054034)		 Ensembl
MGI
Ensembl		 PMID:16054034 PMID:16998816 GO_REF:0000107 MGI:3588895 MGI:3696935 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,046...17,733,431 		JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5796907|PMID:27395007) Ensembl
Ensembl
MGI		 PMID:27395007 GO_REF:0000107 MGI:5796907 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:5796907|PMID:27395007) MGI PMID:27395007 MGI:5796907 NCBI chr 6:54,823,680...54,830,425
Ensembl chr 6:54,823,668...54,829,506 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5796907|PMID:27395007) Ensembl
Ensembl
MGI		 PMID:27395007 GO_REF:0000107 MGI:5796907 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr18:45,477,561...45,480,306
Ensembl chr18:45,477,461...45,480,152 		JBrowse link
G MED12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4839544|PMID:20589884) Ensembl
MGI		 PMID:20589884 GO_REF:0000107 MGI:4839544 NCBI chr  X:57,150,884...57,174,367
Ensembl chr  X:57,150,919...57,175,333 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,899...15,329,986 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588476|PMID:16020517) Ensembl
Ensembl
MGI		 PMID:16020517 GO_REF:0000107 MGI:3588476 NCBI chr 2:151,433,925...151,525,909
Ensembl chr 2:151,489,521...151,522,749 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11002343 RGD:1579866 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TGFB3 transforming growth factor beta 3 ISO RGD PMID:11002343 RGD:1579866 NCBI chr 7:99,133,873...99,162,239
Ensembl chr 7:99,133,879...99,162,232 		JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3841503|PMID:19286674) Ensembl
Ensembl
MGI		 PMID:19286674 GO_REF:0000107 MGI:3841503 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322 		JBrowse link
embryonic skeletal joint development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4946896|PMID:21185280) Ensembl
MGI
Ensembl		 PMID:21185280 GO_REF:0000107 MGI:4946896 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3695832|PMID:17191253) Ensembl
Ensembl
MGI		 PMID:17191253 GO_REF:0000107 MGI:3695832 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18565096) Ensembl
Ensembl
ARUK-UCL		 PMID:18565096 GO_REF:0000107 NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN1 axin 1 acts_upstream_of_or_within ISO MGI MGI:48782 NCBI chr 3:41,344,908...41,393,999
Ensembl chr 3:41,337,071...41,393,997 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1270933|PMID:9664686) Ensembl
Ensembl
MGI		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1270933|PMID:9664686) Ensembl
Ensembl
MGI		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4867119|PMID:20978074) Ensembl
Ensembl
MGI		 PMID:20978074 GO_REF:0000107 MGI:4867119 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXC11 homeobox C11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4867119|PMID:20978074) Ensembl
Ensembl
MGI		 PMID:20978074 GO_REF:0000107 MGI:4867119 NCBI chr 5:19,181,580...19,189,031
Ensembl chr 5:19,178,619...19,189,013 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:4867119|PMID:20978074) MGI PMID:20978074 MGI:4867119 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HYAL1 hyaluronidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3836537|PMID:18772348) MGI
Ensembl		 PMID:18772348 GO_REF:0000107 MGI:3836537 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G NOG noggin involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G SHOX2 short stature homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3805084|PMID:18514492) Ensembl
Ensembl
MGI		 PMID:18514492 GO_REF:0000107 MGI:3805084 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX1 ALX homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21873635)
(MGI:1314705|PMID:9847249), (MGI:3604843|PMID:15728667)		 GO_Central
GO_Central
MGI		 PMID:9847249 PMID:15728667 PMID:21873635 MGI:1314705 MGI:3604843 NCBI chr 5:96,761,683...96,785,125
Ensembl chr 5:96,763,685...96,785,165 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221), (MGI:3604843|PMID:15728667) MGI
Ensembl		 PMID:11641221 PMID:15728667 GO_REF:0000107 MGI:2151109 MGI:3604843 NCBI chr 4:110,047,254...110,058,205
Ensembl chr 4:110,047,116...110,057,872 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3604843|PMID:15728667)
(MGI:2151109|PMID:11641221)
(MGI:1314705|PMID:9847249)		 Ensembl
Ensembl
MGI		 PMID:9847249 PMID:11641221 PMID:15728667 GO_REF:0000107 MGI:1314705 MGI:2151109 MGI:3604843 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO (MGI:3840399|PMID:19270745) MGI PMID:19270745 MGI:3840399 NCBI chr 3:113,044,788...113,184,809
Ensembl chr 3:113,044,836...113,180,742 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1932296|PMID:11290297) Ensembl
Ensembl
MGI		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr10:52,586,089...52,596,154
Ensembl chr10:52,586,509...52,596,564 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:53676|PMID:4100752) Ensembl
Ensembl
MGI		 PMID:4100752 GO_REF:0000107 MGI:53676 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1930428|PMID:11238884) Ensembl
Ensembl
MGI		 PMID:11238884 GO_REF:0000107 MGI:1930428 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841 		JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:44,785,142...45,153,256
Ensembl chr 9:44,785,701...45,147,140 		JBrowse link
G DYNC2I1 dynein 2 intermediate chain 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr18:507,163...555,142
Ensembl chr18:508,276...553,968 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1344210|PMID:10471511) Ensembl
Ensembl
MGI		 PMID:10471511 GO_REF:0000107 MGI:1344210 NCBI chr 4:63,970,939...64,328,107
Ensembl chr 4:63,970,807...64,328,105 		JBrowse link
G FLVCR1 FLVCR heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5471193|PMID:23187127) Ensembl
Ensembl
MGI		 PMID:23187127 GO_REF:0000107 MGI:5471193 NCBI chr 9:130,543,911...130,570,486
Ensembl chr 9:130,541,660...130,570,702 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1339313|PMID:9409679) MGI
Ensembl		 PMID:9409679 GO_REF:0000107 MGI:1339313 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 6:54,823,680...54,830,425
Ensembl chr 6:54,823,668...54,829,506 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3604843|PMID:15728667) MGI
Ensembl		 PMID:15728667 GO_REF:0000107 MGI:3604843 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GSC goosecoid homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:76955|PMID:7555718)
(MGI:76246|PMID:7555726)		 Ensembl
MGI		 PMID:7555718 PMID:7555726 GO_REF:0000107 MGI:76246 MGI:76955 NCBI chr 7:116,099,053...116,101,153
Ensembl chr 7:116,098,327...116,101,338 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3525808|PMID:15634706) MGI
Ensembl		 PMID:15634706 GO_REF:0000107 MGI:3525808 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:21873635)
(MGI:1195045|PMID:9441667)		 GO_Central
GO_Central
Ensembl
MGI		 PMID:9441667 PMID:21873635 GO_REF:0000107 MGI:1195045 NCBI chr18:45,421,542...45,467,803
Ensembl chr18:45,454,213...45,466,537 		JBrowse link
G HOXA4 homeobox A4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21873635)
(MGI:74948|PMID:7628700)
(MGI:67413|PMID:7918106)		 GO_Central
MGI
GO_Central		 PMID:7628700 PMID:7918106 PMID:21873635 MGI:67413 MGI:74948 NCBI chr18:45,443,268...45,445,662 JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3723390|PMID:17417799)
(MGI:1203259|PMID:9603431), (MGI:63693|PMID:7901120)		 Ensembl
Ensembl
MGI		 PMID:7901120 PMID:9603431 PMID:17417799 GO_REF:0000107 MGI:1203259 MGI:3723390 MGI:63693 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G HOXA7 homeobox A7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1313067|PMID:9784603) Ensembl
Ensembl
MGI		 PMID:9784603 GO_REF:0000107 MGI:1313067 NCBI chr18:45,417,137...45,419,113
Ensembl chr18:45,417,203...45,419,101 		JBrowse link
G HOXA9 homeobox A9 involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr18:45,404,594...45,411,512
Ensembl chr18:45,408,375...45,411,509 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747) Ensembl
Ensembl
MGI		 PMID:10885747 GO_REF:0000107 MGI:1859107 NCBI chr12:24,784,953...24,786,377
Ensembl chr12:24,784,594...24,786,576 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747) Ensembl
Ensembl
MGI		 PMID:10885747 GO_REF:0000107 MGI:1859107 NCBI chr12:24,796,786...24,800,499
Ensembl chr12:24,797,225...24,799,303 		JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:21873635)
(MGI:1859107|PMID:10885747)
(MGI:1195045|PMID:9441667)		 GO_Central
GO_Central
MGI
Ensembl		 PMID:9441667 PMID:10885747 PMID:21873635 GO_REF:0000107 MGI:1195045 MGI:1859107 NCBI chr12:24,803,119...24,827,557
Ensembl chr12:24,804,647...24,809,937 		JBrowse link
G HOXB4 homeobox B4 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 Ensembl chr12:24,829,452...24,832,318 JBrowse link
G HOXB5 homeobox B5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747)
(MGI:70296|PMID:7828847)		 Ensembl
MGI
Ensembl		 PMID:7828847 PMID:10885747 GO_REF:0000107 MGI:1859107 MGI:70296 NCBI chr12:24,845,224...24,849,639
Ensembl chr12:24,845,225...24,847,918 		JBrowse link
G HOXB6 homeobox B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747) Ensembl
MGI
Ensembl		 PMID:10885747 GO_REF:0000107 MGI:1859107 NCBI chr12:24,849,741...24,853,494
Ensembl chr12:24,849,742...24,852,286 		JBrowse link
G HOXB7 homeobox B7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747)
(MGI:1313067|PMID:9784603)		 Ensembl
MGI
Ensembl		 PMID:9784603 PMID:10885747 GO_REF:0000107 MGI:1313067 MGI:1859107 NCBI chr12:24,861,165...24,864,675
Ensembl chr12:24,861,174...24,864,620 		JBrowse link
G HOXB8 homeobox B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747)
(MGI:1349283|PMID:10559485)		 Ensembl
MGI
Ensembl		 PMID:10559485 PMID:10885747 GO_REF:0000107 MGI:1349283 MGI:1859107 NCBI chr12:24,865,985...24,879,706
Ensembl chr12:24,865,984...24,868,930 		JBrowse link
G HOXB9 homeobox B9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr12:24,872,662...24,880,134 JBrowse link
G HOXB9 homeobox B9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr12:24,875,723...24,880,333 JBrowse link
G HOXC4 homeobox C4 involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr 5:19,250,411...19,268,267
Ensembl chr 5:19,265,081...19,268,257 		JBrowse link
G HOXC9 homeobox C9 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:21873635)
(MGI:73980|PMID:7547473)		 GO_Central
Ensembl
GO_Central
MGI		 PMID:7547473 PMID:21873635 GO_REF:0000107 MGI:73980 NCBI chr 5:19,212,490...19,215,859
Ensembl chr 5:19,212,905...19,215,984 		JBrowse link
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1350864|PMID:10642795) Ensembl
Ensembl
MGI		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr15:81,911,372...81,921,164
Ensembl chr15:81,917,637...81,921,461 		JBrowse link
G HOXD3 homeobox D3 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:21873635)
(MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)
(MGI:67616|PMID:7913519)		 GO_Central
GO_Central
Ensembl
MGI		 PMID:7910549 PMID:7913519 PMID:21873635 GO_REF:0000107 MGI:63793 MGI:67616 NCBI chr15:81,969,482...81,974,893
Ensembl chr15:81,958,701...81,973,673 		JBrowse link
G HOXD4 homeobox D4 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 Ensembl chr15:81,952,660...81,955,172 JBrowse link
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:21873635)
(MGI:1350864|PMID:10642795)		 GO_Central
GO_Central
Ensembl
MGI		 PMID:10642795 PMID:21873635 GO_REF:0000107 MGI:1350864 NCBI chr15:81,910,415...81,926,276
Ensembl chr15:81,924,142...81,926,274 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (MGI:1349497|PMID:10579729) MGI PMID:10579729 MGI:1349497 NCBI chr 6:79,849,691...79,958,283
Ensembl chr 6:79,849,698...79,958,334 		JBrowse link
G MDFI MyoD family inhibitor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1312999|PMID:9799236) Ensembl
Ensembl
MGI		 PMID:9799236 GO_REF:0000107 MGI:1312999 NCBI chr 7:36,829,060...36,846,995
Ensembl chr 7:36,830,394...36,846,993 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3714538|PMID:17420000) MGI PMID:17420000 MGI:3714538 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G MEN1 menin 1 acts_upstream_of_or_within ISO (MGI:3763871|PMID:17927973) MGI PMID:17927973 MGI:3763871 NCBI chr 2:7,358,130...7,364,952
Ensembl chr 2:7,358,218...7,364,952 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chr 3:121,543,201...121,549,678
Ensembl chr 3:121,543,109...121,549,046 		JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1861090|PMID:10929709) Ensembl
Ensembl
MGI		 PMID:10929709 GO_REF:0000107 MGI:1861090 NCBI chr 5:100,753,440...100,755,558
Ensembl chr 5:100,752,890...100,755,494 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3513962|PMID:15175245) MGI
Ensembl		 PMID:15175245 GO_REF:0000107 MGI:3513962 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G PCGF2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1932296|PMID:11290297) Ensembl
Ensembl
MGI		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr12:23,362,631...23,375,779
Ensembl chr12:23,362,654...23,375,775 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within ISO (MGI:73363|PMID:7758948)
(MGI:1306737|PMID:9729491), (MGI:1321048|PMID:9876178), (MGI:2149056|PMID:11532916)		 MGI PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 MGI:1306737 MGI:1321048 MGI:2149056 MGI:73363 NCBI chr 4:80,427,682...80,502,689
Ensembl chr 4:80,427,687...80,501,646 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491), (MGI:1321048|PMID:9876178), (MGI:2149056|PMID:11532916) MGI PMID:9729491 PMID:9876178 PMID:11532916 MGI:1306737 MGI:1321048 MGI:2149056 NCBI chr 1:269,853,134...269,902,808
Ensembl chr 1:269,853,200...269,903,469 		JBrowse link
G SATB2 SATB homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3692344|PMID:16751105)
(MGI:3695004|PMID:16960803)		 Ensembl
Ensembl
MGI		 PMID:16751105 PMID:16960803 GO_REF:0000107 MGI:3692344 MGI:3695004 NCBI chr15:102,962,635...103,172,224
Ensembl chr15:102,964,417...103,158,232 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:3578604|PMID:15788460) UniProt
UniProt
Ensembl
MGI		 PMID:15788460 GO_REF:0000024 GO_REF:0000107 MGI:3578604 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G SIX2 SIX homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3525808|PMID:15634706) MGI
Ensembl		 PMID:15634706 GO_REF:0000107 MGI:3525808 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,945...95,463,251 		JBrowse link
G SIX4 SIX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3578604|PMID:15788460) MGI
Ensembl		 PMID:15788460 GO_REF:0000107 MGI:3578604 NCBI chr 1:189,670,390...189,682,378
Ensembl chr 1:189,670,390...189,682,577 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G TBX15 T-box transcription factor 15 acts_upstream_of_or_within ISO (MGI:3604843|PMID:15728667) MGI PMID:15728667 MGI:3604843 NCBI chr 4:101,918,891...102,032,280 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042355|PMID:15030764) MGI
Ensembl		 PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3701031|PMID:16818445) MGI PMID:16818445 MGI:3701031 NCBI chr 2:51,102,757...51,128,346
Ensembl chr 2:51,102,763...51,128,346 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1195626|PMID:9389660) Ensembl
Ensembl
MGI		 PMID:9389660 GO_REF:0000107 MGI:1195626 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3767479|PMID:16079159) Ensembl
Ensembl
MGI		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1339313|PMID:9409679) Ensembl
Ensembl
MGI		 PMID:9409679 GO_REF:0000107 MGI:1339313 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3608156|PMID:16221728) Ensembl
Ensembl
MGI		 PMID:16221728 GO_REF:0000107 MGI:3608156 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3714538|PMID:17420000) MGI PMID:17420000 MGI:3714538 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,899...15,329,986 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588476|PMID:16020517) Ensembl
Ensembl
MGI		 PMID:16020517 GO_REF:0000107 MGI:3588476 NCBI chr 2:151,433,925...151,525,909
Ensembl chr 2:151,489,521...151,522,749 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:21873635)
(MGI:4367301|PMID:19763162)		 Ensembl
Ensembl
GO_Central
MGI
GO_Central		 PMID:19763162 PMID:21873635 GO_REF:0000107 MGI:4367301 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,469...22,363,821 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3709664|PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 4:62,569,877...62,600,981
Ensembl chr 4:62,569,885...62,601,439 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in ISO (PMID:14585638) UniProt PMID:14585638 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17625
    multicellular organismal process 8693
      multicellular organism development 4996
        system development 4321
          skeletal system development 581
            embryonic skeletal system development 146
              embryonic skeletal joint development + 16
              embryonic skeletal system morphogenesis + 107
Path 2
Term Annotations click to browse term
  biological_process 17625
    developmental process 6641
      anatomical structure development 6168
        multicellular organism development 4996
          embryo development 1343
            embryo development ending in birth or egg hatching 876
              chordate embryonic development 859
                embryonic skeletal system development 146
                  embryonic skeletal joint development + 16
                  embryonic skeletal system morphogenesis + 107
paths to the root