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ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic skeletal system development
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Accession:GO:0048706 term browser browse the term
Definition:The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure.
Synonyms:exact_synonym: embryonic skeletal development


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embryonic skeletal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2A activin A receptor type 2A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:71660|PMID:7885474) MGI
Ensembl		 PMID:7885474 GO_REF:0000107 MGI:71660 NCBI chr2B:11,933,683...12,020,287
Ensembl chr2B:152,253,826...152,288,385 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1932296|PMID:11290297) MGI
Ensembl		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr10:22,477,755...22,487,894
Ensembl chr10:22,857,776...22,863,479 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (MGI:5912686|PMID:28817564) MGI PMID:28817564 MGI:5912686 NCBI chr 9:59,114,640...59,146,438
Ensembl chr 9:87,186,151...87,216,537 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677 		JBrowse link
G DEAF1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chr11:652,337...709,854 JBrowse link
G DLK1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (MGI:3838429|PMID:19247431) MGI PMID:19247431 MGI:3838429 NCBI chr14:81,348,380...81,356,607
Ensembl chr14:100,654,965...100,668,019 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:87771|PMID:9187081) MGI
Ensembl		 PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:87771|PMID:9187081) MGI
Ensembl		 PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DMRT2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3613100|PMID:16387292) MGI
Ensembl		 PMID:16387292 GO_REF:0000107 MGI:3613100 NCBI chr 9:860,271...867,704
Ensembl chr 9:1,055,473...1,060,962 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3716021|PMID:17544391) MGI
Ensembl		 PMID:17544391 GO_REF:0000107 MGI:3716021 NCBI chr13:2,967,713...3,000,554
Ensembl chr13:21,273,333...21,307,198 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3710451|PMID:17504941) MGI PMID:17504941 MGI:3710451 NCBI chr 9:58,079,700...58,082,849
Ensembl chr 9:86,139,009...86,140,045 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in ISO (MGI:5688194|PMID:19017795) MGI PMID:19017795 MGI:5688194 NCBI chr 4:165,755,000...165,758,735 JBrowse link
G HOXA2 homeobox A2 involved_in ISO (MGI:5644573|PMID:25889273) MGI PMID:25889273 MGI:5644573 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G HOXA3 homeobox A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:67616|PMID:7913519) MGI
Ensembl		 PMID:7913519 GO_REF:0000107 MGI:67616 NCBI chr 7:27,750,642...27,767,125
Ensembl chr 7:27,350,491...27,371,169 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3720535|PMID:17626057) Ensembl
MGI		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr 7:27,786,040...27,789,339
Ensembl chr 7:27,385,175...27,388,990 		JBrowse link
G HOXA6 homeobox A6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057) MGI
Ensembl		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr 7:27,790,031...27,792,348
Ensembl chr 7:27,389,679...27,391,997 		JBrowse link
G HOXA9 homeobox A9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:85243|PMID:9013929)
(MGI:3720535|PMID:17626057)
(MGI:78984|PMID:8625797)		 MGI
Ensembl		 PMID:8625797 PMID:9013929 PMID:17626057 GO_REF:0000107 MGI:3720535 MGI:78984 MGI:85243 NCBI chr 7:27,806,942...27,810,304
Ensembl chr 7:27,405,931...27,409,984 		JBrowse link
G HOXB5 homeobox B5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057) MGI
Ensembl		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr17:8,941,990...8,945,512
Ensembl chr17:9,127,630...9,130,616 		JBrowse link
G HOXB6 homeobox B6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:70296|PMID:7828847)
(MGI:3720535|PMID:17626057)		 MGI
Ensembl		 PMID:7828847 PMID:17626057 GO_REF:0000107 MGI:3720535 MGI:70296 NCBI chr17:8,931,773...8,941,024
Ensembl chr17:9,116,886...9,126,150 		JBrowse link
G HOXB9 homeobox B9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:85243|PMID:9013929)
(MGI:1859107|PMID:10885747)
(MGI:3720535|PMID:17626057)		 MGI
Ensembl		 PMID:9013929 PMID:10885747 PMID:17626057 GO_REF:0000107 MGI:1859107 MGI:3720535 MGI:85243 NCBI chr17:8,910,421...8,916,128
Ensembl chr17:9,095,438...9,100,747 		JBrowse link
G HOXC5 homeobox C5 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057) MGI PMID:17626057 MGI:3720535 NCBI chr12:34,720,006...34,722,202
Ensembl chr12:35,508,711...35,510,388 		JBrowse link
G HOXC6 homeobox C6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057) MGI
Ensembl		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr12:34,724,503...34,739,436
Ensembl chr12:35,512,686...35,526,627 		JBrowse link
G HOXC9 homeobox C9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057) MGI
Ensembl		 PMID:17626057 GO_REF:0000107 MGI:3720535 NCBI chr12:34,751,922...34,755,157
Ensembl chr12:35,540,234...35,543,486 		JBrowse link
G HOXD1 homeobox D1 acts_upstream_of_or_within ISO (MGI:2137767|PMID:11511348) MGI PMID:11511348 MGI:2137767 NCBI chr2B:63,468,317...63,470,658 JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3720535|PMID:17626057)
(MGI:78984|PMID:8625797)		 MGI
Ensembl		 PMID:8625797 PMID:17626057 GO_REF:0000107 MGI:3720535 MGI:78984 NCBI chr2B:63,401,813...63,404,731
Ensembl chr2B:181,112,002...181,113,415 		JBrowse link
G KIAA1217 KIAA1217 ortholog involved_in ISO (MGI:3614233|PMID:16204209) UniProt PMID:16204209 MGI:3614233 NCBI chr10:23,870,239...24,725,508
Ensembl chr10:24,754,677...25,093,844 		JBrowse link
G LOC100985156 3-keto-steroid reductase acts_upstream_of_or_within ISO (MGI:5050793|PMID:21515572) MGI PMID:21515572 MGI:5050793 NCBI chr10:38,424,713...38,447,193
Ensembl chr 1:142,001,162...142,022,865 		JBrowse link
G MBTD1 mbt domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4939865|PMID:21252303) MGI
Ensembl		 PMID:21252303 GO_REF:0000107 MGI:4939865 NCBI chr17:45,267,275...45,350,751
Ensembl chr17:50,137,395...50,215,078 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4868517|PMID:21045211) MGI
Ensembl		 PMID:21045211 GO_REF:0000107 MGI:4868517 NCBI chr17:52,281,443...52,295,919
Ensembl chr17:57,137,254...57,151,328 		JBrowse link
G NKX3-2 NK3 homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1343724|PMID:10449756)
(MGI:1347483|PMID:10572046)		 MGI
Ensembl		 PMID:10449756 PMID:10572046 GO_REF:0000107 MGI:1343724 MGI:1347483 NCBI chr 4:7,958,218...7,961,844
Ensembl chr 4:13,258,949...13,262,458 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:79520|PMID:8631261) MGI PMID:8631261 MGI:79520 NCBI chr 1:17,589,513...17,707,442
Ensembl chr 1:18,639,641...18,756,952 		JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151355|PMID:11566859) MGI
Ensembl		 PMID:11566859 GO_REF:0000107 MGI:2151355 NCBI chr 1:139,985,392...140,311,845
Ensembl chr 1:143,778,701...144,104,797 		JBrowse link
G PCGF2 polycomb group ring finger 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1932296|PMID:11290297) MGI
Ensembl		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr17:18,523,859...18,539,794
Ensembl chr17:18,798,917...18,814,838 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,480,607...48,943,331
Ensembl chr 9:74,745,761...75,220,502 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chr10:90,337,879...90,347,530
Ensembl chr10:93,848,166...93,857,887 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:72077|PMID:7743923) UniProt PMID:7743923 MGI:72077 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3710451|PMID:17504941) MGI
Ensembl		 PMID:17504941 GO_REF:0000107 MGI:3710451 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SLC35D1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (MGI:3771453|PMID:17952091) MGI PMID:17952091 MGI:3771453 NCBI chr 1:66,248,462...66,303,630
Ensembl chr 1:68,134,617...68,188,694 		JBrowse link
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356 		JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chr2B:61,185,975...61,243,155
Ensembl chr2B:178,639,677...178,692,848 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 8:65,992,961...66,194,112
Ensembl chr 8:67,744,801...67,848,704 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr20:43,992,927...44,122,598
Ensembl chr20:45,074,069...45,173,893 		JBrowse link
G TAPT1 transmembrane anterior posterior transformation 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3758514|PMID:17151244) MGI
Ensembl		 PMID:17151244 GO_REF:0000107 MGI:3758514 NCBI chr 4:10,589,166...10,654,951
Ensembl chr 4:15,886,080...15,938,594 		JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:64493|PMID:8293872) MGI
Ensembl		 PMID:8293872 GO_REF:0000107 MGI:64493 NCBI chr 6:164,112,117...164,122,253
Ensembl chr 6:169,095,723...169,106,595 		JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISO (MGI:5544658|PMID:24161523) UniProt PMID:24161523 MGI:5544658 NCBI chr16:20,078,904...20,447,268
Ensembl chr16:17,222,447...17,470,818 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095762|PMID:9268572) MGI
Ensembl		 PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:76977|PMID:7590232) MGI
Ensembl		 PMID:7590232 GO_REF:0000107 MGI:76977 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:24360810) UniProt PMID:24360810 NCBI chr17:74,221,793...74,233,738 JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (MGI:86990|PMID:9106663) MGI PMID:9106663 MGI:86990 NCBI chr16:67,237,476...67,239,545 JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3713422|PMID:17525797) MGI PMID:17525797 MGI:3713422 NCBI chr 9:58,079,700...58,082,849
Ensembl chr 9:86,139,009...86,140,045 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4943100|PMID:21377456) MGI
Ensembl		 PMID:21377456 GO_REF:0000107 MGI:4943100 NCBI chr 8:98,129,147...98,308,120
Ensembl chr 8:100,308,575...100,471,830 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5505384|PMID:23469164) MGI
Ensembl		 PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chr16:130,150...232,369
Ensembl chr16:1,566,824...1,658,884 		JBrowse link
G IRX5 iroquois homeobox 5 involved_in ISO (PMID:22581230) UniProt PMID:22581230 NCBI chr16:35,164,884...35,168,189
Ensembl chr16:54,272,412...54,275,124 		JBrowse link
G LOC100978090 protein ALEX involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,204,188...55,206,608
Ensembl chr20:56,474,459...56,621,747 		JBrowse link
G LOC100990650 guanine nucleotide-binding protein G(s) subunit alpha acts_upstream_of_or_within ISO (MGI:3619837|PMID:15797856) MGI PMID:15797856 MGI:3619837 NCBI chr20:55,190,607...55,262,245 JBrowse link
G MMP14 matrix metallopeptidase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3771253|PMID:18022611) MGI
Ensembl		 PMID:18022611 GO_REF:0000107 MGI:3771253 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058 		JBrowse link
G MMP16 matrix metallopeptidase 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3771253|PMID:18022611) MGI
Ensembl		 PMID:18022611 GO_REF:0000107 MGI:3771253 NCBI chr 8:84,736,752...85,026,711
Ensembl chr 8:86,701,882...86,982,518 		JBrowse link
G NIPBL NIPBL cohesin loading factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4367301|PMID:19763162) MGI
Ensembl		 PMID:19763162 GO_REF:0000107 MGI:4367301 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2155575|PMID:11311163) MGI
Ensembl		 PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chr10:66,906,866...66,916,938
Ensembl chr10:69,433,959...69,443,972 		JBrowse link
G PAX5 paired box 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5476374|PMID:23349049) MGI
Ensembl		 PMID:23349049 GO_REF:0000107 MGI:5476374 NCBI chr 9:36,677,369...36,876,678
Ensembl chr 9:37,474,267...37,673,684 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:73363|PMID:7758948)
(MGI:1306737|PMID:9729491)		 MGI
Ensembl		 PMID:7758948 PMID:9729491 GO_REF:0000107 MGI:1306737 MGI:73363 NCBI chr 1:146,151,633...146,227,926
Ensembl chr 1:149,867,634...149,943,810 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491) MGI PMID:9729491 MGI:1306737 NCBI chr 9:100,792,324...100,849,923 JBrowse link
G RUNX2 RUNX family transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042355|PMID:15030764) MGI
Ensembl		 PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4431136|PMID:20133625) MGI
Ensembl		 PMID:20133625 GO_REF:0000107 MGI:4431136 NCBI chr 3:46,916,615...47,064,046
Ensembl chr 3:48,018,517...48,163,999 		JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4822095|PMID:20515681) MGI
Ensembl		 PMID:20515681 GO_REF:0000107 MGI:4822095 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494 		JBrowse link
G SIX2 SIX homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4822095|PMID:20515681) MGI
Ensembl		 PMID:20515681 GO_REF:0000107 MGI:4822095 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035 		JBrowse link
G SIX4 SIX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4822095|PMID:20515681) MGI
Ensembl		 PMID:20515681 GO_REF:0000107 MGI:4822095 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014 		JBrowse link
G SLC39A1 solute carrier family 39 member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624433|PMID:16652366) MGI
Ensembl		 PMID:16652366 GO_REF:0000107 MGI:3624433 NCBI chr 1:129,315,964...129,324,571
Ensembl chr 1:132,944,346...132,952,951 		JBrowse link
G SLC39A3 solute carrier family 39 member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624433|PMID:16652366) MGI
Ensembl		 PMID:16652366 GO_REF:0000107 MGI:3624433 NCBI chr19:1,756,535...1,764,099
Ensembl chr19:2,714,852...2,722,654 		JBrowse link
G SMAD2 SMAD family member 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3618021|PMID:15183723) MGI
Ensembl		 PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr18:41,213,001...41,309,902
Ensembl chr18:44,580,905...44,668,530 		JBrowse link
G SMAD3 SMAD family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3618021|PMID:15183723) MGI
Ensembl		 PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:3050165|PMID:15190012) MGI PMID:15190012 MGI:3050165 NCBI chr22:2,521,080...2,541,267 JBrowse link
G TBX15 T-box transcription factor 15 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3604843|PMID:15728667) MGI
Ensembl		 PMID:15728667 GO_REF:0000107 MGI:3604843 NCBI chr 1:83,556,763...83,663,453
Ensembl chr 1:118,553,638...118,659,379 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within
involved_in		 ISO (MGI:80520|PMID:8622765)
(MGI:80519|PMID:8622766)		 MGI
UniProt		 PMID:8622765 PMID:8622766 MGI:80519 MGI:80520 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3701721|PMID:16806156) MGI
Ensembl		 PMID:16806156 GO_REF:0000107 MGI:3701721 NCBI chr 9:70,195,007...70,243,514
Ensembl chr 9:98,332,739...98,362,748 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:8988166), (PMID:8988167)
(MGI:1100098|PMID:8988167)
(MGI:3042355|PMID:15030764)		 BHF-UCL
MGI		 PMID:8988166 PMID:8988167 PMID:15030764 MGI:1100098 MGI:3042355 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:3042355|PMID:15030764) MGI PMID:15030764 MGI:3042355 NCBI chr2B:126,080,684...126,143,677 JBrowse link
G WDR19 WD repeat domain 19 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5314316|PMID:22228095) MGI
Ensembl		 PMID:22228095 GO_REF:0000107 MGI:5314316 NCBI chr 4:33,511,283...33,616,946
Ensembl chr 4:39,365,276...39,462,903 		JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3588895|PMID:16054034)
(MGI:3696935|PMID:16998816)		 MGI
Ensembl		 PMID:16054034 PMID:16998816 GO_REF:0000107 MGI:3588895 MGI:3696935 NCBI chr17:10,616,957...10,651,954 JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5796907|PMID:27395007) MGI
Ensembl		 PMID:27395007 GO_REF:0000107 MGI:5796907 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:5796907|PMID:27395007) MGI PMID:27395007 MGI:5796907 NCBI chr19:46,819,833...46,826,235
Ensembl chr19:55,736,325...55,742,589 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5796907|PMID:27395007) MGI
Ensembl		 PMID:27395007 GO_REF:0000107 MGI:5796907 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4839544|PMID:20589884) MGI
Ensembl		 PMID:20589884 GO_REF:0000107 MGI:4839544 NCBI chr  X:60,386,820...60,410,730
Ensembl chr  X:70,443,667...70,466,942 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:148,679,587...148,919,002
Ensembl chr 6:153,390,498...153,619,884 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3588476|PMID:16020517) MGI
Ensembl		 PMID:16020517 GO_REF:0000107 MGI:3588476 NCBI chr 5:145,910,993...145,982,933
Ensembl chr 5:151,936,357...151,986,668 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11002343 RGD:1579866 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041 		JBrowse link
G TGFB3 transforming growth factor beta 3 ISO RGD PMID:11002343 RGD:1579866 NCBI chr14:56,516,697...56,542,097
Ensembl chr14:75,359,505...75,382,412 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3841503|PMID:19286674) MGI
Ensembl		 PMID:19286674 GO_REF:0000107 MGI:3841503 NCBI chr12:3,012,890...3,061,831
Ensembl chr12:2,944,769...2,993,278 		JBrowse link
embryonic skeletal joint development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4946896|PMID:21185280) MGI
Ensembl		 PMID:21185280 GO_REF:0000107 MGI:4946896 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851 		JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3695832|PMID:17191253) MGI
Ensembl		 PMID:17191253 GO_REF:0000107 MGI:3695832 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18565096) ARUK-UCL
Ensembl		 PMID:18565096 GO_REF:0000107 NCBI chr20:43,043,801...43,068,304
Ensembl chr20:44,128,837...44,153,148 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN1 axin 1 acts_upstream_of_or_within ISO MGI MGI:48782 Ensembl chr16:278,239...337,891 JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270933|PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270933|PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in ISO (PMID:16752401) BHF-UCL PMID:16752401 NCBI chr12:40,726,137...40,757,690 JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4867119|PMID:20978074) MGI
Ensembl		 PMID:20978074 GO_REF:0000107 MGI:4867119 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103 		JBrowse link
G HOXC11 homeobox C11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4867119|PMID:20978074) MGI
Ensembl		 PMID:20978074 GO_REF:0000107 MGI:4867119 NCBI chr12:34,777,790...34,782,104
Ensembl chr12:35,567,093...35,570,396 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:4867119|PMID:20978074) MGI PMID:20978074 MGI:4867119 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HYAL1 hyaluronidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3836537|PMID:18772348) MGI
Ensembl		 PMID:18772348 GO_REF:0000107 MGI:3836537 NCBI chr 3:50,228,491...50,238,798
Ensembl chr 3:51,463,239...51,467,286 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G SHOX2 short stature homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3805084|PMID:18514492) MGI
Ensembl		 PMID:18514492 GO_REF:0000107 MGI:3805084 NCBI chr 3:155,138,969...155,149,619
Ensembl chr 3:163,190,284...163,199,239 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:1314705|PMID:9847249), (MGI:3604843|PMID:15728667) MGI PMID:9847249 PMID:15728667 MGI:1314705 MGI:3604843 NCBI chr12:82,800,273...82,822,031
Ensembl chr12:85,902,113...85,923,774 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221), (MGI:3604843|PMID:15728667) MGI
Ensembl		 PMID:11641221 PMID:15728667 GO_REF:0000107 MGI:2151109 MGI:3604843 NCBI chr 1:112,706,782...112,717,635
Ensembl chr 1:127,624,197...127,634,004 		JBrowse link
G ALX4 ALX homeobox 4 acts_upstream_of_or_within ISO (MGI:3604843|PMID:15728667)
(MGI:2151109|PMID:11641221)
(MGI:1314705|PMID:9847249)		 MGI PMID:9847249 PMID:11641221 PMID:15728667 MGI:1314705 MGI:2151109 MGI:3604843 NCBI chr11:44,219,865...44,269,597 JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO (MGI:3840399|PMID:19270745) MGI PMID:19270745 MGI:3840399 NCBI chr2A:25,730,155...25,880,089
Ensembl chr2A:25,832,527...25,973,659 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1932296|PMID:11290297) MGI
Ensembl		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr10:22,477,755...22,487,894
Ensembl chr10:22,857,776...22,863,479 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr12:102,035,480...102,340,084
Ensembl chr12:105,431,075...105,731,172 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:53676|PMID:4100752) MGI
Ensembl		 PMID:4100752 GO_REF:0000107 MGI:53676 NCBI chr 1:105,538,215...105,769,973
Ensembl chr 1:104,249,891...104,481,259 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1930428|PMID:11238884) MGI
Ensembl		 PMID:11238884 GO_REF:0000107 MGI:1930428 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987 		JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:112,263,509...112,632,332
Ensembl chr11:116,196,677...116,302,262 		JBrowse link
G DYNC2I1 dynein 2 intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:162,140,534...162,218,224 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1344210|PMID:10471511) MGI
Ensembl		 PMID:10471511 GO_REF:0000107 MGI:1344210 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829 		JBrowse link
G FLVCR1 FLVCR heme transporter 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5471193|PMID:23187127) MGI
Ensembl		 PMID:23187127 GO_REF:0000107 MGI:5471193 NCBI chr 1:188,425,697...188,466,721
Ensembl chr 1:193,284,158...193,320,554 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (MGI:1339313|PMID:9409679) MGI PMID:9409679 MGI:1339313 NCBI chr16:67,237,476...67,239,545 JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr19:46,819,833...46,826,235
Ensembl chr19:55,736,325...55,742,589 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3604843|PMID:15728667) MGI
Ensembl		 PMID:15728667 GO_REF:0000107 MGI:3604843 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GSC goosecoid homeobox acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:76246|PMID:7555726)
(MGI:76955|PMID:7555718)		 MGI
Ensembl		 PMID:7555718 PMID:7555726 GO_REF:0000107 MGI:76246 MGI:76955 NCBI chr14:75,390,119...75,392,050
Ensembl chr14:94,718,269...94,720,404 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (MGI:3525808|PMID:15634706) MGI PMID:15634706 MGI:3525808 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G HOXA3 homeobox A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1195045|PMID:9441667) MGI
Ensembl		 PMID:9441667 GO_REF:0000107 MGI:1195045 NCBI chr 7:27,750,642...27,767,125
Ensembl chr 7:27,350,491...27,371,169 		JBrowse link
G HOXA4 homeobox A4 acts_upstream_of_or_within ISO (MGI:67413|PMID:7918106)
(MGI:74948|PMID:7628700)		 MGI PMID:7628700 PMID:7918106 MGI:67413 MGI:74948 NCBI chr 7:27,773,001...27,775,284 JBrowse link
G HOXA5 homeobox A5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3723390|PMID:17417799)
(MGI:1203259|PMID:9603431), (MGI:63693|PMID:7901120)		 MGI
Ensembl		 PMID:7901120 PMID:9603431 PMID:17417799 GO_REF:0000107 MGI:1203259 MGI:3723390 MGI:63693 NCBI chr 7:27,786,040...27,789,339
Ensembl chr 7:27,385,175...27,388,990 		JBrowse link
G HOXA7 homeobox A7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1313067|PMID:9784603) MGI
Ensembl		 PMID:9784603 GO_REF:0000107 MGI:1313067 NCBI chr 7:27,799,317...27,802,492
Ensembl chr 7:27,396,898...27,402,142 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1859107|PMID:10885747) MGI
Ensembl		 PMID:10885747 GO_REF:0000107 MGI:1859107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1859107|PMID:10885747) MGI
Ensembl		 PMID:10885747 GO_REF:0000107 MGI:1859107 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
G HOXB3 homeobox B3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1195045|PMID:9441667)
(MGI:1859107|PMID:10885747)		 MGI
Ensembl		 PMID:9441667 PMID:10885747 GO_REF:0000107 MGI:1195045 MGI:1859107 NCBI chr17:8,946,441...8,987,876
Ensembl chr17:9,147,784...9,171,021 		JBrowse link
G HOXB4 homeobox B4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:74948|PMID:7628700)
(MGI:1859107|PMID:10885747)		 MGI
Ensembl		 PMID:7628700 PMID:10885747 GO_REF:0000107 MGI:1859107 MGI:74948 NCBI chr17:8,958,253...8,961,261
Ensembl chr17:9,143,173...9,146,161 		JBrowse link
G HOXB5 homeobox B5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:70296|PMID:7828847)
(MGI:1859107|PMID:10885747)		 MGI
Ensembl		 PMID:7828847 PMID:10885747 GO_REF:0000107 MGI:1859107 MGI:70296 NCBI chr17:8,941,990...8,945,512
Ensembl chr17:9,127,630...9,130,616 		JBrowse link
G HOXB6 homeobox B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1859107|PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 MGI:1859107 NCBI chr17:8,931,773...8,941,024
Ensembl chr17:9,116,886...9,126,150 		JBrowse link
G HOXB7 homeobox B7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1313067|PMID:9784603)
(MGI:1859107|PMID:10885747)		 MGI
Ensembl		 PMID:9784603 PMID:10885747 GO_REF:0000107 MGI:1313067 MGI:1859107 NCBI chr17:8,925,717...8,929,523
Ensembl chr17:9,110,864...9,114,639 		JBrowse link
G HOXB8 homeobox B8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1349283|PMID:10559485)
(MGI:1859107|PMID:10885747)		 MGI
Ensembl		 PMID:10559485 PMID:10885747 GO_REF:0000107 MGI:1349283 MGI:1859107 NCBI chr17:8,920,986...8,924,649
Ensembl chr17:9,106,662...9,109,540 		JBrowse link
G HOXC9 homeobox C9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:73980|PMID:7547473) MGI
Ensembl		 PMID:7547473 GO_REF:0000107 MGI:73980 NCBI chr12:34,751,922...34,755,157
Ensembl chr12:35,540,234...35,543,486 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350864|PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr2B:63,395,636...63,399,704
Ensembl chr2B:181,104,876...181,110,963 		JBrowse link
G HOXD3 homeobox D3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:67616|PMID:7913519)
(MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)		 MGI
Ensembl		 PMID:7910549 PMID:7913519 GO_REF:0000107 MGI:63793 MGI:67616 NCBI chr2B:63,432,720...63,452,816
Ensembl chr2B:181,141,538...181,161,604 		JBrowse link
G HOXD4 homeobox D4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:74948|PMID:7628700)
(MGI:72992|PMID:7750651)		 MGI
Ensembl		 PMID:7628700 PMID:7750651 GO_REF:0000107 MGI:72992 MGI:74948 NCBI chr2B:63,429,084...63,432,972
Ensembl chr2B:181,140,175...181,141,484 		JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350864|PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr2B:63,401,813...63,404,731
Ensembl chr2B:181,112,002...181,113,415 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (MGI:1349497|PMID:10579729) MGI PMID:10579729 MGI:1349497 NCBI chr 1:21,014,951...21,129,937
Ensembl chr 1:21,979,504...22,053,400 		JBrowse link
G MDFI MyoD family inhibitor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1312999|PMID:9799236) MGI
Ensembl		 PMID:9799236 GO_REF:0000107 MGI:1312999 NCBI chr 6:41,222,123...41,239,474
Ensembl chr 6:42,527,805...42,545,030 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3714538|PMID:17420000) MGI PMID:17420000 MGI:3714538 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:39,213,339...39,265,391
Ensembl chr19:47,805,307...47,858,636 		JBrowse link
G MEN1 menin 1 acts_upstream_of_or_within ISO (MGI:3763871|PMID:17927973) MGI PMID:17927973 MGI:3763871 NCBI chr11:60,159,009...60,166,222
Ensembl chr11:63,499,962...63,507,164 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chr2A:15,925,130...15,931,605 JBrowse link
G MYF5 myogenic factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1861090|PMID:10929709) MGI
Ensembl		 PMID:10929709 GO_REF:0000107 MGI:1861090 NCBI chr12:78,236,945...78,239,701
Ensembl chr12:81,347,324...81,350,389 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3513962|PMID:15175245) MGI
Ensembl		 PMID:15175245 GO_REF:0000107 MGI:3513962 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G PCGF2 polycomb group ring finger 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1932296|PMID:11290297) MGI
Ensembl		 PMID:11290297 GO_REF:0000107 MGI:1932296 NCBI chr17:18,523,859...18,539,794
Ensembl chr17:18,798,917...18,814,838 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:73363|PMID:7758948)
(MGI:1306737|PMID:9729491), (MGI:1321048|PMID:9876178), (MGI:2149056|PMID:11532916)		 MGI
Ensembl		 PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 GO_REF:0000107 MGI:1306737 MGI:1321048 MGI:2149056 MGI:73363 NCBI chr 1:146,151,633...146,227,926
Ensembl chr 1:149,867,634...149,943,810 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491), (MGI:1321048|PMID:9876178), (MGI:2149056|PMID:11532916) MGI PMID:9729491 PMID:9876178 PMID:11532916 MGI:1306737 MGI:1321048 MGI:2149056 NCBI chr 9:100,792,324...100,849,923 JBrowse link
G SATB2 SATB homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3695004|PMID:16960803)
(MGI:3692344|PMID:16751105)		 MGI
Ensembl		 PMID:16751105 PMID:16960803 GO_REF:0000107 MGI:3692344 MGI:3695004 NCBI chr2B:86,518,043...86,720,212
Ensembl chr2B:204,406,887...204,599,539 		JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3578604|PMID:15788460) MGI
Ensembl		 PMID:15788460 GO_REF:0000107 MGI:3578604 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494 		JBrowse link
G SIX2 SIX homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3525808|PMID:15634706) MGI
Ensembl		 PMID:15634706 GO_REF:0000107 MGI:3525808 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035 		JBrowse link
G SIX4 SIX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3578604|PMID:15788460) MGI
Ensembl		 PMID:15788460 GO_REF:0000107 MGI:3578604 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISO (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G TBX15 T-box transcription factor 15 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3604843|PMID:15728667) MGI
Ensembl		 PMID:15728667 GO_REF:0000107 MGI:3604843 NCBI chr 1:83,556,763...83,663,453
Ensembl chr 1:118,553,638...118,659,379 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3042355|PMID:15030764) MGI PMID:15030764 MGI:3042355 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3701031|PMID:16818445) MGI PMID:16818445 MGI:3701031 NCBI chr 1:203,320,990...203,350,599
Ensembl chr 1:208,300,609...208,327,191 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1195626|PMID:9389660) MGI
Ensembl		 PMID:9389660 GO_REF:0000107 MGI:1195626 NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr12:102,035,480...102,340,084
Ensembl chr12:105,431,075...105,731,172 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (MGI:1339313|PMID:9409679) MGI PMID:9409679 MGI:1339313 NCBI chr16:67,237,476...67,239,545 JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (MGI:3608156|PMID:16221728) MGI PMID:16221728 MGI:3608156 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3714538|PMID:17420000) MGI PMID:17420000 MGI:3714538 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:148,679,587...148,919,002
Ensembl chr 6:153,390,498...153,619,884 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3588476|PMID:16020517) MGI
Ensembl		 PMID:16020517 GO_REF:0000107 MGI:3588476 NCBI chr 5:145,910,993...145,982,933
Ensembl chr 5:151,936,357...151,986,668 		JBrowse link
G NIPBL NIPBL cohesin loading factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4367301|PMID:19763162) MGI
Ensembl		 PMID:19763162 GO_REF:0000107 MGI:4367301 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G RDH10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3709664|PMID:17473173) MGI
Ensembl		 PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:69,833,320...69,863,536
Ensembl chr 8:71,481,089...71,510,689 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in ISO (PMID:14585638) UniProt PMID:14585638 NCBI chr22:2,521,080...2,541,267 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15348
    multicellular organismal process 7107
      multicellular organism development 4708
        system development 4055
          skeletal system development 567
            embryonic skeletal system development 144
              embryonic skeletal joint development + 16
              embryonic skeletal system morphogenesis + 104
Path 2
Term Annotations click to browse term
  biological_process 15348
    developmental process 6172
      anatomical structure development 5756
        multicellular organism development 4708
          embryo development 1281
            embryo development ending in birth or egg hatching 854
              chordate embryonic development 837
                embryonic skeletal system development 144
                  embryonic skeletal joint development + 16
                  embryonic skeletal system morphogenesis + 104
paths to the root