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ONTOLOGY REPORT - ANNOTATIONS


Term:embryonic skeletal system development
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Accession:GO:0048706 term browser browse the term
Definition:The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure.
Synonyms:exact_synonym: embryonic skeletal development


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embryonic skeletal system development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A IEA
ISO
GO_REF:0000107
MGI:1861779 (MGI:71660|PMID:7885474)
Ensembl
RGD
PMID:7885474 GO_REF:0000107 MGI:71660 NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO MGI:99161 (MGI:1932296|PMID:11290297) RGD PMID:11290297 MGI:1932296 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:2158495 (MGI:3640733|PMID:16712836) RGD PMID:16712836 MGI:3640733 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cdk20 cyclin-dependent kinase 20 ISO MGI:6113512 (MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO (PMID:18553566) RGD PMID:18553566 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Deaf1 DEAF1 transcription factor ISS
ISO
GO_REF:0000024
(MGI:3029622|PMID:14966286)
UniProt
RGD
PMID:14966286 GO_REF:0000024 MGI:3029622 NCBI chr 1:214,283,787...214,317,466
Ensembl chr 1:214,283,790...214,317,466
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO (MGI:3838429|PMID:19247431) RGD PMID:19247431 MGI:3838429 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Dlx1 distal-less homeobox 1 IEA
ISO
GO_REF:0000107
MGI:1857826|MGI:94902 (MGI:87771|PMID:9187081)
Ensembl
RGD
PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 ISO MGI:1857828|MGI:94901 (MGI:87771|PMID:9187081) RGD PMID:9187081 MGI:87771 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 ISO MGI:3512139 (MGI:3613100|PMID:16387292) RGD PMID:16387292 MGI:3613100 NCBI chr 1:243,662,819...243,669,312
Ensembl chr 1:243,662,823...243,669,312
JBrowse link
G Etl4 enhancer trap locus 4 ISO (MGI:3614233|PMID:16204209) RGD PMID:16204209 MGI:3614233 NCBI chr17:87,173,265...87,681,268
Ensembl chr17:87,274,944...87,681,317
JBrowse link
G Fgf9 fibroblast growth factor 9 ISO MGI:2135961 (MGI:3716021|PMID:17544391) RGD PMID:17544391 MGI:3716021 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:3711070|MGI:98297 (MGI:3710451|PMID:17504941) RGD PMID:17504941 MGI:3710451 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Hoxa3 homeobox A3 ISO MGI:96207 (MGI:67616|PMID:7913519) RGD PMID:7913519 MGI:67616 NCBI chr 4:82,137,802...82,181,836
Ensembl chr 4:82,138,683...82,141,385
JBrowse link
G Hoxa5 homeo box A5 ISO MGI:96186|MGI:96196 (MGI:3720535|PMID:17626057) RGD PMID:17626057 MGI:3720535
G Hoxa6 homeobox A6 ISO MGI:96187|MGI:96197 (MGI:3720535|PMID:17626057) RGD PMID:17626057 MGI:3720535 NCBI chr 4:82,173,478...82,183,597
Ensembl chr 4:82,173,293...82,263,302
JBrowse link
G Hoxa9 homeobox A9 ISO MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797), (MGI:85243|PMID:9013929) RGD PMID:8625797 PMID:9013929 PMID:17626057 MGI:3720535 MGI:78984 MGI:85243
G Hoxb5 homeo box B5 ISO MGI:96177|MGI:96196 (MGI:3720535|PMID:17626057) RGD PMID:17626057 MGI:3720535 NCBI chr10:84,152,152...84,154,360
Ensembl chr10:84,152,152...84,154,360
JBrowse link
G Hoxb6 homeo box B6 ISO MGI:2151485|MGI:96178|MGI:96197 (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847) RGD PMID:7828847 PMID:17626057 MGI:3720535 MGI:70296 NCBI chr10:84,147,331...84,150,238
Ensembl chr10:84,147,836...84,149,600
JBrowse link
G Hoxb9 homeo box B9 ISO MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:85243|PMID:9013929) RGD PMID:9013929 PMID:10885747 PMID:17626057 MGI:1859107 MGI:3720535 MGI:85243 NCBI chr10:84,119,772...84,124,963
Ensembl chr10:84,119,884...84,123,390
JBrowse link
G Hoxc5 homeo box C5 ISO MGI:96177|MGI:96186 (MGI:3720535|PMID:17626057) RGD PMID:17626057 MGI:3720535 NCBI chr 7:144,628,120...144,631,542
Ensembl chr 7:144,628,120...144,631,542
JBrowse link
G Hoxc6 homeo box C6 ISO MGI:96178|MGI:96187 (MGI:3720535|PMID:17626057) RGD PMID:17626057 MGI:3720535 NCBI chr 7:144,612,230...144,626,036
Ensembl chr 7:144,623,555...144,625,516
JBrowse link
G Hoxc9 homeobox C9 ISO MGI:96180|MGI:96190|MGI:96210 (MGI:3720535|PMID:17626057) RGD PMID:17626057 MGI:3720535 NCBI chr 7:144,592,462...144,598,807
Ensembl chr 7:144,595,960...144,598,632
JBrowse link
G Hoxd1 homeo box D1 ISO MGI:3616015 (MGI:2137767|PMID:11511348) RGD PMID:11511348 MGI:2137767 NCBI chr 3:61,685,619...61,687,758
Ensembl chr 3:61,685,619...61,687,758
JBrowse link
G Hoxd9 homeo box D9 ISO MGI:2150414|MGI:96180|MGI:96190|MGI:96199 (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797) RGD PMID:8625797 PMID:17626057 MGI:3720535 MGI:78984 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 ISO MGI:5056371 (MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:5050793 NCBI chr13:88,288,116...88,308,019
Ensembl chr13:88,288,046...88,307,988
JBrowse link
G Mbtd1 mbt domain containing 1 ISO MGI:4940055 (MGI:4939865|PMID:21252303) RGD PMID:21252303 MGI:4939865 NCBI chr10:81,588,233...81,645,532
Ensembl chr10:81,592,114...81,642,663
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
MGI:4887578 (MGI:4868517|PMID:21045211)
Ensembl
RGD
PMID:21045211 GO_REF:0000107 MGI:4868517 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Nkx3-2 NK3 homeobox 2 ISO MGI:1857926|MGI:1931319 (MGI:1343724|PMID:10449756), (MGI:1347483|PMID:10572046) RGD PMID:10449756 PMID:10572046 MGI:1343724 MGI:1347483 NCBI chr14:73,813,531...73,818,489
Ensembl chr14:73,813,528...73,815,757
JBrowse link
G Nog noggin ISO (PMID:10080184) RGD PMID:10080184 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pax7 paired box 7 ISO MGI:1857831 (MGI:79520|PMID:8631261) RGD PMID:8631261 MGI:79520 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Pbx1 PBX homeobox 1 ISO MGI:2155612 (MGI:2151355|PMID:11566859) RGD PMID:11566859 MGI:2151355 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO MGI:88174 (MGI:1932296|PMID:11290297) RGD PMID:11290297 MGI:1932296 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 ISO (PMID:18519639)
(MGI:3795695|PMID:18519639)
RGD PMID:18519639 MGI:3795695 NCBI chr 1:236,031,988...236,313,858
Ensembl chr 1:236,031,988...236,313,858
JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Scx scleraxis bHLH transcription factor ISO (PMID:7743923) RGD PMID:7743923 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:95655 (MGI:3710451|PMID:17504941)
Ensembl
RGD
PMID:17504941 GO_REF:0000107 MGI:3710451 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Slc35d1 solute carrier family 35 member D1 ISO MGI:3774133 (MGI:3771453|PMID:17952091) RGD PMID:17952091 MGI:3771453 NCBI chr 5:122,700,396...122,746,815
Ensembl chr 5:122,699,587...122,746,839
JBrowse link
G Sp1 Sp1 transcription factor ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Sulf1 sulfatase 1 ISS
ISO
IEA
GO_REF:0000024
UniProtKB:Q8CFG0 (MGI:3771123|PMID:18213582)
GO_REF:0000104
UniProt
RGD
PMID:18213582 GO_REF:0000024 GO_REF:0000104 MGI:3771123 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Sulf2 sulfatase 2 ISO UniProtKB:Q8CFG0 (MGI:3771123|PMID:18213582) RGD PMID:18213582 MGI:3771123 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 ISO MGI:1857317 (MGI:3758514|PMID:17151244) RGD PMID:17151244 MGI:3758514 NCBI chr14:71,416,153...71,462,646
Ensembl chr14:71,424,083...71,462,618
JBrowse link
G Tbxt T-box transcription factor T ISO MGI:1857760 (MGI:64493|PMID:8293872) RGD PMID:8293872 MGI:64493 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,252,099...77,262,301
Ensembl chr17:77,252,100...77,261,731
JBrowse link
G Wnt11 Wnt family member 11 ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(PMID:19918918)
GO_REF:0000107
RGD
Ensembl
PMID:19918918 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Xylt1 xylosyltransferase 1 ISS
ISO
GO_REF:0000024
(MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000024 MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx3 ALX homeobox 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:210,376,510...210,386,928
Ensembl chr 2:210,381,829...210,386,928
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:1857137 (MGI:1095762|PMID:9268572)
Ensembl
RGD
PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Dlx2 distal-less homeobox 2 IEA
ISO
GO_REF:0000107
MGI:1857828 (MGI:76977|PMID:7590232)
Ensembl
RGD
PMID:7590232 GO_REF:0000107 MGI:76977 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO
ISS
(PMID:24360810)
GO_REF:0000024
RGD
UniProt
PMID:24360810 GO_REF:0000024 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (PMID:7874170), (PMID:7987400) RGD PMID:7874170 PMID:7987400 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857865 (MGI:86990|PMID:9106663) RGD PMID:9106663 MGI:86990 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:2388397|MGI:98297 (MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:3713422 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Gnas GNAS complex locus ISO MGI:3043361 (MGI:3619837|PMID:15797856) RGD PMID:15797856 MGI:3619837 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4942413 (MGI:4943100|PMID:21377456) RGD PMID:21377456 MGI:4943100 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Ift140 intraflagellar transport 140 ISO MGI:4458412 (MGI:5505384|PMID:23469164) RGD PMID:23469164 MGI:5505384 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
JBrowse link
G Irx5 iroquois homeobox 5 ISO (PMID:22581230) RGD PMID:22581230 NCBI chr19:16,415,813...16,421,088
Ensembl chr19:16,415,636...16,421,191
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:1276107 (MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:3771253 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp16 matrix metallopeptidase 16 IEA
ISO
GO_REF:0000107
MGI:2445723 (MGI:3771253|PMID:18022611)
Ensembl
RGD
PMID:18022611 GO_REF:0000107 MGI:3771253 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO MGI:4332250 (MGI:4367301|PMID:19763162) RGD PMID:19763162 MGI:4367301 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Pax5 paired box 5 ISO MGI:2386577 (MGI:5476374|PMID:23349049) RGD PMID:23349049 MGI:5476374 NCBI chr 5:60,007,587...60,191,973
Ensembl chr 5:60,007,587...60,191,941
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(MGI:894516|PMID:9226440)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9226440, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:894516, RGD:13792537 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:1857640|MGI:98218 (MGI:1306737|PMID:9729491), (MGI:73363|PMID:7758948) RGD PMID:7758948 PMID:9729491 MGI:1306737 MGI:73363 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:97712 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Runx2 RUNX family transcription factor 2 ISO
IEA
MGI:104685|MGI:98872 (MGI:3042355|PMID:15030764)
GO_REF:0000107
RGD
Ensembl
PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO MGI:4437211 (MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:4431136 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:106034 (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six2 SIX homeobox 2 ISO MGI:3691857 (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Six4 SIX homeobox 4 ISO MGI:102780 (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Slc39a1 solute carrier family 39 member 1 ISO MGI:2147269|MGI:3625131 (MGI:3624433|PMID:16652366) RGD PMID:16652366 MGI:3624433 NCBI chr 2:189,609,766...189,615,367
Ensembl chr 2:189,609,800...189,615,366
JBrowse link
G Slc39a3 solute carrier family 39 member 3 ISO MGI:1353474 (MGI:3624433|PMID:16652366) RGD PMID:16652366 MGI:3624433 NCBI chr 7:11,545,073...11,551,074
Ensembl chr 7:11,545,024...11,553,370
JBrowse link
G Smad2 SMAD family member 2 ISO MGI:1201674 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:108051 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179191 (MGI:3050165|PMID:15190012)
UniProt
RGD
PMID:15190012 GO_REF:0000024 MGI:3050165 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tbx15 T-box transcription factor 15 ISO MGI:1856015 (MGI:3604843|PMID:15728667) RGD PMID:15728667 MGI:3604843 NCBI chr 2:201,289,042...201,390,752
Ensembl chr 2:201,289,357...201,390,745
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISS
ISO
GO_REF:0000024
MGI:1888387 (MGI:80519|PMID:8622766), (MGI:80520|PMID:8622765)
UniProt
RGD
PMID:8622765 PMID:8622766 GO_REF:0000024 MGI:80519 MGI:80520 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ISO MGI:2680164 (MGI:3701721|PMID:16806156) RGD PMID:16806156 MGI:3701721 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO (MGI:2678274|PMID:12975342) RGD PMID:12975342 MGI:2678274 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:8988166), (PMID:8988167)
MGI:99829 (MGI:1100098|PMID:8988167), (MGI:3042355|PMID:15030764)
RGD PMID:8988166 PMID:8988167 PMID:15030764 MGI:1100098 MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO MGI:99829 (MGI:3042355|PMID:15030764) RGD PMID:15030764 MGI:3042355 NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510
JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:5315747 (MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:5314316 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:1856821|MGI:3526437 (MGI:3588895|PMID:16054034), (MGI:3696935|PMID:16998816) RGD PMID:16054034 PMID:16998816 MGI:3588895 MGI:3696935 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 ISO MGI:1917550 (MGI:5796907|PMID:27395007) RGD PMID:27395007 MGI:5796907 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fuz fuzzy planar cell polarity protein ISO MGI:3531090|MGI:99604 (MGI:5796907|PMID:27395007) RGD PMID:27395007 MGI:5796907 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1856276 (MGI:5796907|PMID:27395007) RGD PMID:27395007 MGI:5796907 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Med12 mediator complex subunit 12 ISO MGI:4839485 (MGI:4839544|PMID:20589884) RGD PMID:20589884 MGI:4839544 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO (MGI:5468075|PMID:23267094) RGD PMID:23267094 MGI:5468075 NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 ISO MGI:3589383 (MGI:3588476|PMID:16020517) RGD PMID:16020517 MGI:3588476 NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IDA RGD PMID:11002343 RGD:1579866 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IDA RGD PMID:11002343 RGD:1579866 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
embryonic skeletal joint development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 ISO MGI:2682061 (MGI:4946896|PMID:21185280) RGD PMID:21185280 MGI:4946896 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3695832|PMID:17191253) RGD PMID:17191253 MGI:3695832 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Slc2a10 solute carrier family 2 member 10 ISO (PMID:18565096) RGD PMID:18565096 NCBI chr 3:162,182,156...162,194,610
Ensembl chr 3:162,181,974...162,194,804
JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 ISO MGI:1856035|MGI:1856036 RGD MGI:48782
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:103302|MGI:1857137 (MGI:1270933|PMID:9664686)
Ensembl
RGD
PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO MGI:1934010|MGI:88180 (MGI:1270933|PMID:9664686) RGD PMID:9664686 MGI:1270933 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO
IEA
(PMID:16752401)
GO_REF:0000107
RGD
Ensembl
PMID:16752401 GO_REF:0000107 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:96193|MGI:96203 (MGI:4867119|PMID:20978074) RGD PMID:20978074 MGI:4867119 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxc11 homeobox C11 ISO MGI:96172|MGI:96203 (MGI:4867119|PMID:20978074) RGD PMID:20978074 MGI:4867119 NCBI chr 7:144,565,392...144,568,580
Ensembl chr 7:144,565,392...144,567,580
JBrowse link
G Hoxd11 homeobox D11 ISO MGI:96172|MGI:96193 (MGI:4867119|PMID:20978074) RGD PMID:20978074 MGI:4867119 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Hyal1 hyaluronidase 1 IEA
ISO
GO_REF:0000107
MGI:2658730 (MGI:3836537|PMID:18772348)
Ensembl
RGD
PMID:18772348 GO_REF:0000107 MGI:3836537 NCBI chr 8:116,332,834...116,337,522
Ensembl chr 8:116,332,796...116,335,435
JBrowse link
G Nog noggin ISO
IEA
(PMID:16151340)
GO_REF:0000107
RGD
Ensembl
PMID:16151340 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Shox2 short stature homeobox 2 ISO MGI:3626291 (MGI:3805084|PMID:18514492) RGD PMID:18514492 MGI:3805084 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216)
Ensembl
RGD
PMID:21262216 GO_REF:0000107 MGI:4950000 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 ISO
IBA
MGI:108359 (MGI:1314705|PMID:9847249), (MGI:3604843|PMID:15728667)
PMID:21873635
RGD PMID:9847249 PMID:15728667, PMID:21873635 MGI:1314705 MGI:3604843, RGD:13792537 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
JBrowse link
G Alx3 ALX homeobox 3 ISO MGI:108359 (MGI:2151109|PMID:11641221), (MGI:3604843|PMID:15728667) RGD PMID:11641221 PMID:15728667 MGI:2151109 MGI:3604843 NCBI chr 2:210,376,510...210,386,928
Ensembl chr 2:210,381,829...210,386,928
JBrowse link
G Alx4 ALX homeobox 4 ISO MGI:104621|MGI:1277097|MGI:1856069 (MGI:1314705|PMID:9847249), (MGI:2151109|PMID:11641221), (MGI:3604843|PMID:15728667) RGD PMID:9847249 PMID:11641221 PMID:15728667 MGI:1314705 MGI:2151109 MGI:3604843 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Asxl2 ASXL transcriptional regulator 2 ISO MGI:3840841 (MGI:3840399|PMID:19270745) RGD PMID:19270745 MGI:3840399 NCBI chr 6:27,835,346...27,919,285
Ensembl chr 6:27,887,797...27,915,563
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO MGI:99161 (MGI:1932296|PMID:11290297) RGD PMID:11290297 MGI:1932296 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:2158495 (MGI:3640733|PMID:16712836) RGD PMID:16712836 MGI:3640733 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO MGI:3768254 (MGI:3767479|PMID:16079159) RGD PMID:16079159 MGI:3767479 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO MGI:1856399 (MGI:53676|PMID:4100752) RGD PMID:4100752 MGI:53676 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEA
ISO
GO_REF:0000107
MGI:2680670 (MGI:1930428|PMID:11238884)
Ensembl
RGD
PMID:11238884 GO_REF:0000107 MGI:1930428 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 ISO (PMID:12051741) RGD PMID:12051741 NCBI chr 8:49,733,835...50,056,115
Ensembl chr 8:49,737,798...50,055,560
JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 ISO (PMID:23910462) RGD PMID:23910462 NCBI chr 6:144,069,077...144,124,975
Ensembl chr 6:144,069,022...144,123,729
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:2150426 (MGI:1344210|PMID:10471511) RGD PMID:10471511 MGI:1344210 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Flvcr1 FLVCR heme transporter 1 ISO MGI:5474636 (MGI:5471193|PMID:23187127) RGD PMID:23187127 MGI:5471193 NCBI chr13:109,624,167...109,629,609
Ensembl chr13:109,578,074...109,629,482
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857740 (MGI:1339313|PMID:9409679) RGD PMID:9409679 MGI:1339313 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Fuz fuzzy planar cell polarity protein ISS
ISO
GO_REF:0000024
(MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618)
UniProt
RGD
PMID:19767740 PMID:21935430 PMID:23806618 GO_REF:0000024 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1277234 (MGI:3604843|PMID:15728667) RGD PMID:15728667 MGI:3604843 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gsc goosecoid homeobox ISO MGI:1857496|MGI:1857726 (MGI:76246|PMID:7555726), (MGI:76955|PMID:7555718) RGD PMID:7555718 PMID:7555726 MGI:76246 MGI:76955 NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:102778 (MGI:3525808|PMID:15634706) RGD PMID:15634706 MGI:3525808 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Hoxa3 homeobox A3 ISO
IBA
MGI:96184|MGI:96207 (MGI:1195045|PMID:9441667)
PMID:21873635
RGD PMID:9441667, PMID:21873635 MGI:1195045, RGD:13792537 NCBI chr 4:82,137,802...82,181,836
Ensembl chr 4:82,138,683...82,141,385
JBrowse link
G Hoxa4 homeo box A4 ISO
IBA
MGI:2150391|MGI:96185|MGI:96208 (MGI:67413|PMID:7918106), (MGI:74948|PMID:7628700)
PMID:21873635
RGD PMID:7628700 PMID:7918106, PMID:21873635 MGI:67413 MGI:74948, RGD:13792537 NCBI chr 4:82,158,234...82,160,317
Ensembl chr 4:82,158,892...82,160,240
JBrowse link
G Hoxa5 homeo box A5 ISO MGI:2150397|MGI:3723623 (MGI:1203259|PMID:9603431), (MGI:3723390|PMID:17417799), (MGI:63693|PMID:7901120) RGD PMID:7901120 PMID:9603431 PMID:17417799 MGI:1203259 MGI:3723390 MGI:63693
G Hoxa6 homeobox A6 ISO MGI:2150392 (MGI:67413|PMID:7918106) RGD PMID:7918106 MGI:67413 NCBI chr 4:82,173,478...82,183,597
Ensembl chr 4:82,173,293...82,263,302
JBrowse link
G Hoxa7 homeobox A7 ISO MGI:96188 (MGI:1313067|PMID:9784603) RGD PMID:9784603 MGI:1313067 NCBI chr 4:82,184,299...82,187,890
Ensembl chr 4:82,183,196...82,186,190
JBrowse link
G Hoxa9 homeobox A9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Hoxb1 homeo box B1 ISO MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747) RGD PMID:10885747 MGI:1859107 NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687
JBrowse link
G Hoxb2 homeobox B2 ISO MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747) RGD PMID:10885747 MGI:1859107 NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688
JBrowse link
G Hoxb3 homeo box B3 ISO
IBA
MGI:2151773|MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:1859107|PMID:10885747)
PMID:21873635
RGD PMID:9441667 PMID:10885747, PMID:21873635 MGI:1195045 MGI:1859107, RGD:13792537 NCBI chr10:84,170,629...84,196,823
Ensembl chr10:84,182,118...84,195,796
JBrowse link
G Hoxb4 homeo box B4 ISO
IBA
MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:74948|PMID:7628700)
PMID:21873635
RGD PMID:7628700 PMID:10885747, PMID:21873635 MGI:1859107 MGI:74948, RGD:13792537 NCBI chr10:84,167,331...84,169,913
Ensembl chr10:84,167,331...84,169,907
JBrowse link
G Hoxb5 homeo box B5 ISO MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:70296|PMID:7828847) RGD PMID:7828847 PMID:10885747 MGI:1859107 MGI:70296 NCBI chr10:84,152,152...84,154,360
Ensembl chr10:84,152,152...84,154,360
JBrowse link
G Hoxb6 homeo box B6 ISO MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747) RGD PMID:10885747 MGI:1859107 NCBI chr10:84,147,331...84,150,238
Ensembl chr10:84,147,836...84,149,600
JBrowse link
G Hoxb7 homeo box B7 ISO MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (MGI:1313067|PMID:9784603), (MGI:1859107|PMID:10885747) RGD PMID:9784603 PMID:10885747 MGI:1313067 MGI:1859107 NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
JBrowse link
G Hoxb8 homeo box B8 IEA
ISO
GO_REF:0000107
MGI:1934178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190 (MGI:1349283|PMID:10559485), (MGI:1859107|PMID:10885747)
Ensembl
RGD
PMID:10559485 PMID:10885747 GO_REF:0000107 MGI:1349283 MGI:1859107 NCBI chr10:84,131,484...84,133,874
Ensembl chr10:84,131,495...84,133,246
JBrowse link
G Hoxb9 homeo box B9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:84,119,772...84,124,963
Ensembl chr10:84,119,884...84,123,390
JBrowse link
G Hoxc4 homeo box C4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:144,646,605...144,652,589
Ensembl chr 7:144,647,587...144,650,129
JBrowse link
G Hoxc9 homeobox C9 ISO MGI:2150685 (MGI:73980|PMID:7547473) RGD PMID:7547473 MGI:73980 NCBI chr 7:144,592,462...144,598,807
Ensembl chr 7:144,595,960...144,598,632
JBrowse link
G Hoxd10 homeo box D10 ISO MGI:96210 (MGI:1350864|PMID:10642795) RGD PMID:10642795 MGI:1350864 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
JBrowse link
G Hoxd3 homeo box D3 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:1857959|MGI:96175 (MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)
Ensembl
RGD
PMID:7910549 PMID:7913519, PMID:21873635 GO_REF:0000107 MGI:63793 MGI:67616, RGD:13792537 NCBI chr 3:61,650,569...61,670,285
Ensembl chr 3:61,658,245...61,670,282
JBrowse link
G Hoxd4 homeo box D4 ISO
IBA
MGI:2151488|MGI:96176 (MGI:72992|PMID:7750651), (MGI:74948|PMID:7628700)
PMID:21873635
RGD PMID:7628700 PMID:7750651, PMID:21873635 MGI:72992 MGI:74948, RGD:13792537 NCBI chr 3:61,634,005...61,653,581
Ensembl chr 3:61,634,005...61,651,056
JBrowse link
G Hoxd9 homeo box D9 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:96202 (MGI:1350864|PMID:10642795)
Ensembl
RGD
PMID:10642795, PMID:21873635 GO_REF:0000107 MGI:1350864, RGD:13792537 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO MGI:1934892 (MGI:1349497|PMID:10579729) RGD PMID:10579729 MGI:1349497 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G LOC103689925 homeobox protein Hox-A9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,191,804...82,199,025
Ensembl chr 4:82,192,963...82,194,927
JBrowse link
G LOC103692128 homeobox protein Hox-A9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,277,599...82,284,820
Ensembl chr 4:82,192,963...82,194,927
Ensembl chr 4:82,192,963...82,194,927
JBrowse link
G LOC108348320 homeobox protein Hox-A3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Mdfi MyoD family inhibitor ISO MGI:2155446 (MGI:1312999|PMID:9799236) RGD PMID:9799236 MGI:1312999 NCBI chr 9:15,166,118...15,184,469
Ensembl chr 9:15,166,118...15,184,468
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO MGI:3603182 (MGI:3714538|PMID:17420000) RGD PMID:17420000 MGI:3714538 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Megf8 multiple EGF-like-domains 8 IEA
ISO
ISS
GO_REF:0000107
(MGI:5551355|PMID:24052814)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045
JBrowse link
G Men1 menin 1 ISO MGI:2683274|MGI:3573783 (MGI:3763871|PMID:17927973) RGD PMID:17927973 MGI:3763871 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor IEA
ISO
GO_REF:0000107
(MGI:3790402|PMID:17360777)
Ensembl
RGD
PMID:17360777 GO_REF:0000107 MGI:3790402 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Myf5 myogenic factor 5 ISO MGI:1857219 (MGI:1861090|PMID:10929709) RGD PMID:10929709 MGI:1861090 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISS
ISO
GO_REF:0000024
MGI:3033240 (MGI:3513962|PMID:15175245)
UniProt
RGD
PMID:15175245 GO_REF:0000024 MGI:3513962 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO MGI:88174 (MGI:1932296|PMID:11290297) RGD PMID:11290297 MGI:1932296 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:1857640|MGI:98218 (MGI:1306737|PMID:9729491), (MGI:1321048|PMID:9876178), (MGI:2149056|PMID:11532916), (MGI:73363|PMID:7758948) RGD PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 MGI:1306737 MGI:1321048 MGI:2149056 MGI:73363 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:97712 (MGI:1306737|PMID:9729491), (MGI:1321048|PMID:9876178), (MGI:2149056|PMID:11532916) RGD PMID:9729491 PMID:9876178 PMID:11532916 MGI:1306737 MGI:1321048 MGI:2149056 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Satb2 SATB homeobox 2 ISO MGI:3692768|MGI:3695425 (MGI:3692344|PMID:16751105), (MGI:3695004|PMID:16960803) RGD PMID:16751105 PMID:16960803 MGI:3692344 MGI:3695004 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:106034 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six2 SIX homeobox 2 ISO MGI:96174 (MGI:3525808|PMID:15634706) RGD PMID:15634706 MGI:3525808 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Six4 SIX homeobox 4 ISO MGI:102780 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO
GO_REF:0000024
(MGI:3052265|PMID:15254231)
UniProt
RGD
PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Tbx15 T-box transcription factor 15 ISO MGI:1856015|MGI:95729 (MGI:3604843|PMID:15728667) RGD PMID:15728667 MGI:3604843 NCBI chr 2:201,289,042...201,390,752
Ensembl chr 2:201,289,357...201,390,745
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:3038818 (MGI:3042355|PMID:15030764) RGD PMID:15030764 MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Wnt9a Wnt family member 9A ISO MGI:3701350 (MGI:3701031|PMID:16818445) RGD PMID:16818445 MGI:3701031 NCBI chr10:45,659,045...45,686,103
Ensembl chr10:45,659,143...45,681,393
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IEA
ISO
GO_REF:0000107
MGI:1857799 (MGI:1195626|PMID:9389660)
Ensembl
RGD
PMID:9389660 GO_REF:0000107 MGI:1195626 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst11 carbohydrate sulfotransferase 11 ISO MGI:3768254 (MGI:3767479|PMID:16079159) RGD PMID:16079159 MGI:3767479 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857740 (MGI:1339313|PMID:9409679) RGD PMID:9409679 MGI:1339313 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:2385711 (MGI:3608156|PMID:16221728) RGD PMID:16221728 MGI:3608156 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO
GO_REF:0000024
(MGI:3777712|PMID:14695376)
UniProt
RGD
PMID:14695376 GO_REF:0000024 MGI:3777712 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO MGI:3603182 (MGI:3714538|PMID:17420000) RGD PMID:17420000 MGI:3714538 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO (MGI:5468075|PMID:23267094) RGD PMID:23267094 MGI:5468075 NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 ISO MGI:3589383 (MGI:3588476|PMID:16020517) RGD PMID:16020517 MGI:3588476 NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO
IBA
MGI:4332250 (MGI:4367301|PMID:19763162)
PMID:21873635
RGD PMID:19763162, PMID:21873635 MGI:4367301, RGD:13792537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Tbx1 T-box transcription factor 1 ISO
ISS
(PMID:14585638)
GO_REF:0000024
RGD
UniProt
PMID:14585638 GO_REF:0000024 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    multicellular organismal process 9042
      multicellular organism development 5766
        system development 5298
          skeletal system development 555
            embryonic skeletal system development 146
              embryonic skeletal joint development + 16
              embryonic skeletal system morphogenesis + 110
Path 2
Term Annotations click to browse term
  biological_process 20045
    developmental process 6824
      anatomical structure development 6290
        multicellular organism development 5766
          embryo development 1310
            embryo development ending in birth or egg hatching 863
              chordate embryonic development 847
                embryonic skeletal system development 146
                  embryonic skeletal joint development + 16
                  embryonic skeletal system morphogenesis + 110
paths to the root