ONTOLOGY REPORT - ANNOTATIONS |
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Term: | embryonic cranial skeleton morphogenesis |
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Accession: | GO:0048701
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browse the term
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Definition: | The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase. |
Synonyms: | exact_synonym: | embryonic cranium morphogenesis |
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Alx3 |
ALX homeobox 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:210,376,510...210,386,928
Ensembl chr 2:210,381,829...210,386,928
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Bmp4 |
bone morphogenetic protein 4 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:1857137 (MGI:1095762|PMID:9268572) |
Ensembl RGD |
PMID:9268572 |
GO_REF:0000107 MGI:1095762 |
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Dlx2 |
distal-less homeobox 2 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:1857828 (MGI:76977|PMID:7590232) |
Ensembl RGD |
PMID:7590232 |
GO_REF:0000107 MGI:76977 |
NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
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Eif4a3 |
eukaryotic translation initiation factor 4A3 |
involved_in |
ISO ISS |
(PMID:24360810) GO_REF:0000024 |
RGD UniProt |
PMID:24360810 |
GO_REF:0000024 |
NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
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Fgfr2 |
fibroblast growth factor receptor 2 |
involved_in |
ISO |
(PMID:7874170), (PMID:7987400) |
RGD |
PMID:7874170 PMID:7987400 |
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NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
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Foxc2 |
forkhead box C2 |
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ISO |
MGI:1857865 (MGI:86990|PMID:9106663) |
RGD |
PMID:9106663 |
MGI:86990 |
NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
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Gas1 |
growth arrest-specific 1 |
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ISO |
MGI:2388397|MGI:98297 (MGI:3713422|PMID:17525797) |
RGD |
PMID:17525797 |
MGI:3713422 |
NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
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Gnas |
GNAS complex locus |
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ISO |
MGI:3043361 (MGI:3619837|PMID:15797856) |
RGD |
PMID:15797856 |
MGI:3619837 |
NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483 Ensembl chr 3:172,374,957...172,428,483
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Grhl2 |
grainyhead-like transcription factor 2 |
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ISO |
MGI:4942413 (MGI:4943100|PMID:21377456) |
RGD |
PMID:21377456 |
MGI:4943100 |
NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
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Ift140 |
intraflagellar transport 140 |
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ISO |
MGI:4458412 (MGI:5505384|PMID:23469164) |
RGD |
PMID:23469164 |
MGI:5505384 |
NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
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Irx5 |
iroquois homeobox 5 |
involved_in |
ISO |
(PMID:22581230) |
RGD |
PMID:22581230 |
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NCBI chr19:16,415,813...16,421,088
Ensembl chr19:16,415,636...16,421,191
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Mmp14 |
matrix metallopeptidase 14 |
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ISO |
MGI:1276107 (MGI:3771253|PMID:18022611) |
RGD |
PMID:18022611 |
MGI:3771253 |
NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
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Mmp16 |
matrix metallopeptidase 16 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:2445723 (MGI:3771253|PMID:18022611) |
Ensembl RGD |
PMID:18022611 |
GO_REF:0000107 MGI:3771253 |
NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
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Nipbl |
NIPBL, cohesin loading factor |
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ISO |
MGI:4332250 (MGI:4367301|PMID:19763162) |
RGD |
PMID:19763162 |
MGI:4367301 |
NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
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Nodal |
nodal growth differentiation factor |
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ISO |
MGI:2158732 (MGI:2155575|PMID:11311163) |
RGD |
PMID:11311163 |
MGI:2155575 |
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
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Pax5 |
paired box 5 |
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ISO |
MGI:2386577 (MGI:5476374|PMID:23349049) |
RGD |
PMID:23349049 |
MGI:5476374 |
NCBI chr 5:60,007,587...60,191,973
Ensembl chr 5:60,007,587...60,191,941
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Pdgfra |
platelet derived growth factor receptor alpha |
involved_in |
IEA ISS IBA ISO |
GO_REF:0000107 GO_REF:0000024 PMID:21873635 (MGI:894516|PMID:9226440) |
Ensembl UniProt RGD |
PMID:9226440, PMID:21873635, PMID:21873635 |
GO_REF:0000024 GO_REF:0000107 MGI:894516, RGD:13792537, RGD:13792537 |
NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
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Prrx1 |
paired related homeobox 1 |
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ISO |
MGI:1857640|MGI:98218 (MGI:1306737|PMID:9729491), (MGI:73363|PMID:7758948) |
RGD |
PMID:7758948 PMID:9729491 |
MGI:1306737 MGI:73363 |
NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
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Prrx2 |
paired related homeobox 2 |
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ISO |
MGI:97712 (MGI:1306737|PMID:9729491) |
RGD |
PMID:9729491 |
MGI:1306737 |
NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
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Runx2 |
RUNX family transcription factor 2 |
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ISO IEA |
MGI:104685|MGI:98872 (MGI:3042355|PMID:15030764) GO_REF:0000107 |
RGD Ensembl |
PMID:15030764 |
GO_REF:0000107 MGI:3042355 |
NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
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Setd2 |
SET domain containing 2, histone lysine methyltransferase |
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ISO |
MGI:4437211 (MGI:4431136|PMID:20133625) |
RGD |
PMID:20133625 |
MGI:4431136 |
NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
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Six1 |
SIX homeobox 1 |
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ISO |
MGI:106034 (MGI:4822095|PMID:20515681) |
RGD |
PMID:20515681 |
MGI:4822095 |
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
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Six2 |
SIX homeobox 2 |
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ISO |
MGI:3691857 (MGI:4822095|PMID:20515681) |
RGD |
PMID:20515681 |
MGI:4822095 |
NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
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Six4 |
SIX homeobox 4 |
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ISO |
MGI:102780 (MGI:4822095|PMID:20515681) |
RGD |
PMID:20515681 |
MGI:4822095 |
NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
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Slc39a1 |
solute carrier family 39 member 1 |
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ISO |
MGI:2147269|MGI:3625131 (MGI:3624433|PMID:16652366) |
RGD |
PMID:16652366 |
MGI:3624433 |
NCBI chr 2:189,609,766...189,615,367
Ensembl chr 2:189,609,800...189,615,366
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Slc39a3 |
solute carrier family 39 member 3 |
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ISO |
MGI:1353474 (MGI:3624433|PMID:16652366) |
RGD |
PMID:16652366 |
MGI:3624433 |
NCBI chr 7:11,545,073...11,551,074
Ensembl chr 7:11,545,024...11,553,370
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Smad2 |
SMAD family member 2 |
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ISO |
MGI:1201674 (MGI:3618021|PMID:15183723) |
RGD |
PMID:15183723 |
MGI:3618021 |
NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
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Smad3 |
SMAD family member 3 |
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ISO |
MGI:108051 (MGI:3618021|PMID:15183723) |
RGD |
PMID:15183723 |
MGI:3618021 |
NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
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Tbx1 |
T-box transcription factor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 MGI:2179191 (MGI:3050165|PMID:15190012) |
UniProt RGD |
PMID:15190012 |
GO_REF:0000024 MGI:3050165 |
NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
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Tbx15 |
T-box transcription factor 15 |
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ISO |
MGI:1856015 (MGI:3604843|PMID:15728667) |
RGD |
PMID:15728667 |
MGI:3604843 |
NCBI chr 2:201,289,042...201,390,752
Ensembl chr 2:201,289,357...201,390,745
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Tfap2a |
transcription factor AP-2 alpha |
involved_in |
ISS ISO |
GO_REF:0000024 MGI:1888387 (MGI:80519|PMID:8622766), (MGI:80520|PMID:8622765) |
UniProt RGD |
PMID:8622765 PMID:8622766 |
GO_REF:0000024 MGI:80519 MGI:80520 |
NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
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Tgfbr1 |
transforming growth factor, beta receptor 1 |
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ISO |
MGI:2680164 (MGI:3701721|PMID:16806156) |
RGD |
PMID:16806156 |
MGI:3701721 |
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
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Tgfbr2 |
transforming growth factor, beta receptor 2 |
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ISO |
(MGI:2678274|PMID:12975342) |
RGD |
PMID:12975342 |
MGI:2678274 |
NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
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Twist1 |
twist family bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:8988166), (PMID:8988167) MGI:99829 (MGI:1100098|PMID:8988167), (MGI:3042355|PMID:15030764) |
RGD |
PMID:8988166 PMID:8988167 PMID:15030764 |
MGI:1100098 MGI:3042355 |
NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
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Twist2 |
twist family bHLH transcription factor 2 |
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ISO |
MGI:99829 (MGI:3042355|PMID:15030764) |
RGD |
PMID:15030764 |
MGI:3042355 |
NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510
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Wdr19 |
WD repeat domain 19 |
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ISO |
MGI:5315747 (MGI:5314316|PMID:22228095) |
RGD |
PMID:22228095 |
MGI:5314316 |
NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
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Wnt9b |
Wnt family member 9B |
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ISO |
MGI:1856821|MGI:3526437 (MGI:3588895|PMID:16054034), (MGI:3696935|PMID:16998816) |
RGD |
PMID:16054034 PMID:16998816 |
MGI:3588895 MGI:3696935 |
NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
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Fgf8 |
fibroblast growth factor 8 |
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ISO |
MGI:1917550 (MGI:5796907|PMID:27395007) |
RGD |
PMID:27395007 |
MGI:5796907 |
NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
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Fuz |
fuzzy planar cell polarity protein |
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ISO |
MGI:3531090|MGI:99604 (MGI:5796907|PMID:27395007) |
RGD |
PMID:27395007 |
MGI:5796907 |
NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
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Gli3 |
GLI family zinc finger 3 |
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ISO |
MGI:1856276 (MGI:5796907|PMID:27395007) |
RGD |
PMID:27395007 |
MGI:5796907 |
NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
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Hoxa1 |
homeobox A1 |
involved_in |
ISO |
(PMID:16155570) |
RGD |
PMID:16155570 |
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NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
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Med12 |
mediator complex subunit 12 |
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ISO |
MGI:4839485 (MGI:4839544|PMID:20589884) |
RGD |
PMID:20589884 |
MGI:4839544 |
NCBI chr X:71,174,653...71,197,812
Ensembl chr X:71,174,699...71,197,812
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Mthfd1l |
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like |
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ISO |
(MGI:5468075|PMID:23267094) |
RGD |
PMID:23267094 |
MGI:5468075 |
NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
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Ndst1 |
N-deacetylase and N-sulfotransferase 1 |
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ISO |
MGI:3589383 (MGI:3588476|PMID:16020517) |
RGD |
PMID:16020517 |
MGI:3588476 |
NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
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Tgfb2 |
transforming growth factor, beta 2 |
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IDA |
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RGD |
PMID:11002343 |
RGD:1579866 |
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
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Tgfb3 |
transforming growth factor, beta 3 |
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IDA |
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RGD |
PMID:11002343 |
RGD:1579866 |
NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
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Tulp3 |
TUB like protein 3 |
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ISO |
MGI:2388066 (MGI:3841503|PMID:19286674) |
RGD |
PMID:19286674 |
MGI:3841503 |
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
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Chst11 |
carbohydrate sulfotransferase 11 |
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ISO |
MGI:3768254 (MGI:3767479|PMID:16079159) |
RGD |
PMID:16079159 |
MGI:3767479 |
NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
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Foxc2 |
forkhead box C2 |
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ISO |
MGI:1857740 (MGI:1339313|PMID:9409679) |
RGD |
PMID:9409679 |
MGI:1339313 |
NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
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Hoxa2 |
homeobox A2 |
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ISO |
MGI:2385711 (MGI:3608156|PMID:16221728) |
RGD |
PMID:16221728 |
MGI:3608156 |
NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
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Lhx1 |
LIM homeobox 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3777712|PMID:14695376) |
UniProt RGD |
PMID:14695376 |
GO_REF:0000024 MGI:3777712 |
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Mef2c |
myocyte enhancer factor 2C |
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ISO |
MGI:3603182 (MGI:3714538|PMID:17420000) |
RGD |
PMID:17420000 |
MGI:3714538 |
NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
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Mthfd1l |
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like |
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ISO |
(MGI:5468075|PMID:23267094) |
RGD |
PMID:23267094 |
MGI:5468075 |
NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
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Ndst1 |
N-deacetylase and N-sulfotransferase 1 |
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ISO |
MGI:3589383 (MGI:3588476|PMID:16020517) |
RGD |
PMID:16020517 |
MGI:3588476 |
NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
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Nipbl |
NIPBL, cohesin loading factor |
involved_in |
ISO IBA |
MGI:4332250 (MGI:4367301|PMID:19763162) PMID:21873635 |
RGD |
PMID:19763162, PMID:21873635, PMID:21873635 |
MGI:4367301, RGD:13792537, RGD:13792537 |
NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
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Rdh10 |
retinol dehydrogenase 10 |
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ISO |
(MGI:3709664|PMID:17473173) |
RGD |
PMID:17473173 |
MGI:3709664 |
NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
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Tbx1 |
T-box transcription factor 1 |
involved_in |
ISO ISS |
(PMID:14585638) GO_REF:0000024 |
RGD UniProt |
PMID:14585638 |
GO_REF:0000024 |
NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
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Term paths to the root
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