Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:generation of neurons
go back to main search page
Accession:GO:0048699 term browser browse the term
Definition:The process in which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons.
Synonyms:exact_synonym: neuron generation


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
 
generation of neurons term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:5490388|PMID:23616538) MGI PMID:23616538 MGI:5490388 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Cit citron rho-interacting serine/threonine kinase involved_in ISO (MGI:2181325|PMID:11086988) UniProt PMID:11086988 MGI:2181325 NCBI chrNW_004936668:991,043...1,146,578 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (PMID:20882566) DFLAT PMID:20882566 NCBI chrNW_004936469:39,794,613...39,798,448 JBrowse link
G Dbn1 drebrin 1 acts_upstream_of_or_within ISO (PMID:20882566) DFLAT PMID:20882566 NCBI chrNW_004936597:1,735,589...1,751,628 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:3608481|PMID:16267092) MGI PMID:16267092 MGI:3608481 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3614329|PMID:16172976) MGI PMID:16172976 MGI:3614329 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3629823|PMID:15342729) MGI PMID:15342729 MGI:3629823 NCBI chrNW_004936587:5,065,200...5,143,029 JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (MGI:3604840|PMID:16142215) MGI PMID:16142215 MGI:3604840 NCBI chrNW_004936709:2,163,510...2,223,429 JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within
ISO (MGI:1859633|PMID:11318877)
(MGI:5490388|PMID:23616538)
UniProt
MGI
PMID:11318877 PMID:23616538 MGI:1859633 MGI:5490388 NCBI chrNW_004936520:4,978,896...4,980,648 JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:3689152|PMID:16938278) UniProt PMID:16938278 MGI:3689152 NCBI chrNW_004936495:4,839,496...4,842,906 JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3689152|PMID:16938278) UniProt PMID:16938278 MGI:3689152 NCBI chrNW_004936495:4,887,718...4,900,198 JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (MGI:3622962|PMID:16623824) MGI PMID:16623824 MGI:3622962 NCBI chrNW_004936474:28,049,326...28,061,495 JBrowse link
G Thoc2 THO complex 2 involved_in ISO (PMID:26166480) UniProt PMID:26166480 NCBI chrNW_004936479:6,855,405...6,972,256 JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 involved_in ISO (MGI:3054139|PMID:15363391) UniProt PMID:15363391 MGI:3054139 NCBI chrNW_004936769:1,061,907...1,081,350 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chrNW_004936686:1,459,582...1,556,478 JBrowse link
G Neurod1 neuronal differentiation 1 involved_in ISO (MGI:2158684|PMID:11861467) UniProt PMID:11861467 MGI:2158684 NCBI chrNW_004936509:10,421,821...10,425,927 JBrowse link
G Neurod4 neuronal differentiation 4 involved_in ISO (MGI:2158684|PMID:11861467) UniProt PMID:11861467 MGI:2158684 NCBI chrNW_004936891:471,576...482,195 JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISO (MGI:3691257|PMID:17075007) UniProt PMID:17075007 MGI:3691257 NCBI chrNW_004936520:4,978,896...4,980,648 JBrowse link
G Rorb RAR related orphan receptor B involved_in ISO (MGI:5546314|PMID:23652001) UniProt PMID:23652001 MGI:5546314 NCBI chrNW_004936503:10,294,530...10,473,070 JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) UniProt PMID:23206892 MGI:5467661 NCBI chrNW_004936474:561,822...571,817 JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO (MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:3849342 NCBI chrNW_004936784:1,162,950...1,177,407 JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chrNW_004936539:7,763,036...8,185,001 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (MGI:2151063|PMID:11997145) MGI PMID:11997145 MGI:2151063 NCBI chrNW_004936564:4,432,556...4,453,056 JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:3578029 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in
ISO (MGI:4848234|PMID:21055390)
(MGI:5467661|PMID:23206892)
MGI
UniProt
PMID:21055390 PMID:23206892 MGI:4848234 MGI:5467661 NCBI chrNW_004936498:5,434,912...5,487,354 JBrowse link
anterior/posterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcc DCC netrin 1 receptor acts_upstream_of_or_within ISO (MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:3807817 NCBI chrNW_004936497:10,122,078...11,169,900 JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:3807817 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Unc5a unc-5 netrin receptor A acts_upstream_of_or_within ISO (MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:3807817 NCBI chrNW_004936597:1,060,496...1,122,832 JBrowse link
G Unc5b unc-5 netrin receptor B acts_upstream_of_or_within ISO (MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:3807817 NCBI chrNW_004936521:7,472,788...7,547,408 JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within ISO (MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:3807817 NCBI chrNW_004936687:2,600,635...2,951,407 JBrowse link
asymmetric neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:28453519)
(MGI:5907381|PMID:28453519)
UniProt PMID:28453519 MGI:5907381 NCBI chrNW_004936580:5,213,323...5,230,861 JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISO (PMID:23946438) UniProt PMID:23946438 NCBI chrNW_004936548:3,213,305...3,599,876 JBrowse link
G Tead3 TEA domain transcription factor 3 involved_in ISO (PMID:23946438) UniProt PMID:23946438 NCBI chrNW_004936476:23,766,021...23,776,785 JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clrn1 clarin 1 acts_upstream_of_or_within ISO (MGI:3849925|PMID:19414487) MGI PMID:19414487 MGI:3849925 NCBI chrNW_004936758:1,250,831...1,286,016 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3527944|PMID:15630379) MGI PMID:15630379 MGI:3527944 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (MGI:5784951|PMID:26084842) MGI PMID:26084842 MGI:5784951 NCBI chrNW_004936794:707,122...994,206 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004936600:4,660,211...4,678,911 JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chrNW_004936473:18,550,489...18,645,470 JBrowse link
G Tmc1 transmembrane channel like 1 acts_upstream_of_or_within ISO (MGI:5320864|PMID:22105175) MGI PMID:22105175 MGI:5320864 NCBI chrNW_004936503:8,669,465...8,826,340 JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (MGI:1332721|PMID:10080181) UniProt PMID:10080181 MGI:1332721 NCBI chrNW_004936621:363,489...380,616 JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:3833041 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:3833041 NCBI chrNW_004936477:3,354,336...3,445,248 JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3611666|PMID:16407553) MGI PMID:16407553 MGI:3611666 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:1339217|PMID:10364557) MGI PMID:10364557 MGI:1339217 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101962840 WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chrNW_004936491:8,238,644...8,749,172 JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:4430014 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004936563:676,564...772,877 JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (MGI:4413621|PMID:19936227) MGI PMID:19936227 MGI:4413621 NCBI chrNW_004936866:412,719...419,381 JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:3709803 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:3663248 NCBI chrNW_004936476:14,234,447...14,381,582 JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within ISO (MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712) MGI PMID:19414487 PMID:19423712 MGI:3849925 MGI:4353469 NCBI chrNW_004936758:1,250,831...1,286,016 JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO (MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:6278501 NCBI chrNW_004936504:8,775,832...8,789,254 JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO (MGI:3578102|PMID:15905332)
(MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710)
MGI PMID:15905332 PMID:17876667 PMID:23217710 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chrNW_004936476:23,479,939...23,491,611 JBrowse link
G LOC101969963 cadherin-23 acts_upstream_of_or_within ISO (MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
(MGI:3526751|PMID:15537665)
(MGI:1933915|PMID:11322776)
(MGI:3625226|PMID:12121736)
(MGI:1929001|PMID:11138008), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710)
MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chrNW_004936521:7,078,874...7,285,361 JBrowse link
G LOC101970726 TRIO and F-actin binding protein acts_upstream_of_or_within ISO (MGI:4881391|PMID:20510926) MGI PMID:20510926 MGI:4881391 NCBI chrNW_004936492:3,337,791...3,390,420 JBrowse link
G Myo3a myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chrNW_004936484:1,509,248...1,723,717 JBrowse link
G Myo3b myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chrNW_004936509:615,958...1,074,742 JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO (MGI:2156358|PMID:11753415)
(MGI:3625226|PMID:12121736)
(MGI:3686545|PMID:17050716)
MGI PMID:11753415 PMID:12121736 PMID:17050716 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chrNW_004936498:5,758,572...5,824,526 JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO (MGI:1928787|PMID:10978835)
(MGI:3619110|PMID:11124469)
(MGI:3654702|PMID:16887306)
(MGI:5468200|PMID:23217710)
(MGI:3526751|PMID:15537665)
MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chrNW_004936910:233,800...602,145 JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004936600:4,660,211...4,678,911 JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chrNW_004936540:4,205,871...4,323,121 JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) UniProt PMID:27269051 MGI:5789047 NCBI chrNW_004936671:1,064,937...1,232,985 JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004936563:676,564...772,877 JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 acts_upstream_of_or_within ISO (MGI:5578076|PMID:24920589) MGI PMID:24920589 MGI:5578076 NCBI chrNW_004936594:119,808...136,620 JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within ISO (MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373) MGI PMID:10464373 PMID:10466888 MGI:1344578 MGI:3700629 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
G Strc stereocilin involved_in
acts_upstream_of_or_within
ISO (MGI:5430850|PMID:21165971)
(MGI:3818235|PMID:18849963)
UniProt
MGI
PMID:18849963 PMID:21165971 MGI:3818235 MGI:5430850 NCBI chrNW_004936471:6,760,289...6,777,425 JBrowse link
G Tprn taperin acts_upstream_of_or_within ISO (MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:6278501 NCBI chrNW_004936669:786,569...794,713 JBrowse link
G Whrn whirlin acts_upstream_of_or_within ISO (MGI:5796227|PMID:27117407) MGI PMID:27117407 MGI:5796227 NCBI chrNW_004936487:3,668,465...3,748,234 JBrowse link
axon choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 acts_upstream_of_or_within ISO (MGI:3026699|PMID:11182083) MGI PMID:11182083 MGI:3026699 NCBI chrNW_004936595:954,383...960,573 JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (MGI:70834|PMID:7859286) MGI PMID:7859286 MGI:70834 NCBI chrNW_004936536:2,995,654...3,091,079 JBrowse link
axon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap2 calmodulin regulated spectrin associated protein family member 2 involved_in ISO (PMID:24908486) UniProt PMID:24908486 RGD:13441206 NCBI chrNW_004936567:3,497,304...3,590,967 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:1889152|PMID:10970885) MGI PMID:10970885 MGI:1889152 NCBI chrNW_004936837:523,227...538,799 JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 ISO RGD PMID:15992542 RGD:8553295 NCBI chrNW_004936489:10,329,223...10,335,758 JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO (MGI:5013978|PMID:21632923) MGI PMID:21632923 MGI:5013978 NCBI chrNW_004936779:962,696...1,106,452 JBrowse link
G Grm7 glutamate metabotropic receptor 7 involved_in ISO (PMID:33500274) UniProt PMID:33500274 NCBI chrNW_004936602:5,111,406...5,488,506 JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO (PMID:20621658) UniProt PMID:20621658 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G LOC101975169 small vasohibin binding protein involved_in ISO (PMID:31324789)
(MGI:6383353|PMID:31324789)
UniProt PMID:31324789 MGI:6383353 NCBI chrNW_004936474:24,128,633...24,135,231 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO PMID:25944905
(MGI:5502974|PMID:23576431), (MGI:6162406|PMID:25944905)
UniProt PMID:23576431 PMID:25944905 MGI:5502974 MGI:6162406 RGD:13673742 RGD:13673780 NCBI chrNW_004936694:2,223,020...2,263,388 JBrowse link
G Mark2 microtubule affinity regulating kinase 2 involved_in ISO PMID:16717194 ARUK-UCL PMID:16717194 RGD:13602002 NCBI chrNW_004936599:5,226,603...5,287,677 JBrowse link
G Nefh neurofilament heavy chain involved_in ISO (PMID:7536898)
(MGI:2183394|PMID:9763431)
BHF-UCL PMID:7536898 PMID:9763431 MGI:2183394 NCBI chrNW_004936657:3,443,406...3,453,096 JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (MGI:5511081|PMID:24038504) MGI PMID:24038504 MGI:5511081 NCBI chrNW_004936499:10,534,953...10,553,411 JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:4436804|PMID:20071523) MGI PMID:20071523 MGI:4436804 NCBI chrNW_004936724:1,747,015...1,780,298 JBrowse link
G Tbc1d24 TBC1 domain family member 24 acts_upstream_of_or_within ISO (MGI:6279048|PMID:30335140) MGI PMID:30335140 MGI:6279048 NCBI chrNW_004936694:1,556,717...1,582,019 JBrowse link
G Trim32 tripartite motif containing 32 acts_upstream_of_or_within ISO (MGI:3836840|PMID:19155210) MGI PMID:19155210 MGI:3836840 NCBI chrNW_004936487:5,606,690...5,619,856 JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO (MGI:5511081|PMID:24038504) MGI PMID:24038504 MGI:5511081 NCBI chrNW_004936627:410,280...438,922 JBrowse link
G Vash2 vasohibin 2 involved_in ISO (PMID:31324789) UniProt PMID:31324789 NCBI chrNW_004936557:622,947...661,495 JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:22422766)
(MGI:3575865|PMID:15767679), (MGI:3629480|PMID:16648254), (MGI:5424069|PMID:22422766)
UniProt PMID:15767679 PMID:16648254 PMID:22422766 MGI:3575865 MGI:3629480 MGI:5424069 NCBI chrNW_004936542:2,058,048...2,067,468 JBrowse link
axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 involved_in ISO (MGI:5908783|PMID:25533347) UniProt PMID:25533347 MGI:5908783 NCBI chrNW_004936543:5,146,961...6,187,634 JBrowse link
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:5515840|PMID:24035762) MGI PMID:24035762 MGI:5515840 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in ISO (PMID:27723745)
(MGI:5818605|PMID:27723745)
UniProt PMID:27723745 MGI:5818605 NCBI chrNW_004936611:2,074,655...2,101,846 JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (PMID:16260607) UniProt PMID:16260607 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:3614628 NCBI chrNW_004936472:29,958,716...30,287,798 JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:3614628 NCBI chrNW_004936499:3,905,262...4,004,457 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Edn1 endothelin 1 involved_in ISO (MGI:3784120|PMID:18401410) MGI PMID:18401410 MGI:3784120 NCBI chrNW_004936534:885,489...892,292 JBrowse link
G Edn2 endothelin 2 involved_in ISO (MGI:3784120|PMID:18401410) MGI PMID:18401410 MGI:3784120 NCBI chrNW_004936474:23,061,219...23,064,525 JBrowse link
G Edn3 endothelin 3 involved_in ISO (MGI:3784120|PMID:18401410) MGI PMID:18401410 MGI:3784120 NCBI chrNW_004936530:1,744,216...1,766,602 JBrowse link
G Ednra endothelin receptor type A involved_in ISO (MGI:3784120|PMID:18401410) MGI PMID:18401410 MGI:3784120 NCBI chrNW_004936535:1,950,117...2,005,786 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:6148478 NCBI chrNW_004936835:316,767...321,999 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:6148478 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO (MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:2683853 NCBI chrNW_004936574:1,465,981...1,495,717 JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:5303045 NCBI chrNW_004936487:12,395,817...12,413,860 JBrowse link
G Map1b microtubule associated protein 1B acts_upstream_of_or_within ISO (MGI:3694279|PMID:16536727) MGI PMID:16536727 MGI:3694279 NCBI chrNW_004936549:4,266,371...4,371,579 JBrowse link
G Mapt microtubule associated protein tau acts_upstream_of_or_within ISO (MGI:3694279|PMID:16536727), (MGI:4454362|PMID:20338169)
(MGI:3614337|PMID:11891784)
MGI PMID:11891784 PMID:16536727 PMID:20338169 MGI:3614337 MGI:3694279 MGI:4454362 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO (MGI:3582873|PMID:15972963) MGI PMID:15972963 MGI:3582873 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:19406211 BHF-UCL PMID:19406211 RGD:8554851 NCBI chrNW_004936762:435,729...458,261 JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO (MGI:2156641|PMID:11807038) MGI PMID:11807038 MGI:2156641 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO (MGI:2156641|PMID:11807038) MGI PMID:11807038 MGI:2156641 NCBI chrNW_004936504:8,348,460...8,351,246 JBrowse link
G Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 acts_upstream_of_or_within ISO (MGI:4462113|PMID:20417104) MGI PMID:20417104 MGI:4462113 NCBI chrNW_004936631:100,072...196,557 JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004936725:2,229,772...2,270,458 JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) acts_upstream_of_or_within ISO (MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:2683853 NCBI chrNW_004936471:33,430,589...33,454,353 JBrowse link
G Slc9a6 solute carrier family 9 member A6 acts_upstream_of_or_within ISO (PMID:24035762) MGI PMID:24035762 NCBI chrNW_004936513:11,158,609...11,215,477 JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (MGI:5585364|PMID:24794856) MGI PMID:24794856 MGI:5585364 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:3706258 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 acts_upstream_of_or_within ISO (MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:3706258 NCBI chrNW_004936821:1,051,247...1,162,500 JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in
acts_upstream_of_or_within
ISO (PMID:24607389)
(MGI:5574428|PMID:24607389)
(MGI:5532214|PMID:23861879)
UniProt
MGI
PMID:23861879 PMID:24607389 MGI:5532214 MGI:5574428 NCBI chrNW_004936502:7,649,808...7,732,731 JBrowse link
G Vcl vinculin acts_upstream_of_or_within ISO (MGI:5568171|PMID:24623780) MGI PMID:24623780 MGI:5568171 NCBI chrNW_004936521:5,051,077...5,163,036 JBrowse link
axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:5437554 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Nrp2 neuropilin 2 involved_in ISO (MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:5437554 NCBI chrNW_004936631:2,106,378...2,222,082 JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:5437554 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISO (PMID:16840550) UniProt PMID:16840550 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:16840550) UniProt PMID:16840550 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slit3 slit guidance ligand 3 involved_in ISO (PMID:16840550) UniProt PMID:16840550 NCBI chrNW_004936622:191,165...756,552 JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:19447091 RGD:2324988 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (MGI:1101275|PMID:9396756) MGI PMID:9396756 MGI:1101275 NCBI chrNW_004936529:826,178...841,304 JBrowse link
axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ablim1 actin binding LIM protein 1 acts_upstream_of_or_within ISO (MGI:1928568|PMID:11163266) MGI PMID:11163266 MGI:1928568 NCBI chrNW_004936486:4,720,643...4,906,460 JBrowse link
G Alcam activated leukocyte cell adhesion molecule acts_upstream_of_or_within ISO (MGI:3056232|PMID:15345243) MGI PMID:15345243 MGI:3056232 NCBI chrNW_004936701:895,414...1,084,155 JBrowse link
G Ank3 ankyrin 3 acts_upstream_of_or_within ISO (MGI:3510083|PMID:15479642) MGI PMID:15479642 MGI:3510083 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:3614238 NCBI chrNW_004936842:452,682...476,533 JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO (MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:3614238 NCBI chrNW_004936482:8,166,380...8,489,489 JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Artn artemin acts_upstream_of_or_within ISO (MGI:2183092|PMID:12160745) MGI PMID:12160745 MGI:2183092 NCBI chrNW_004936474:25,252,510...25,254,221 JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (MGI:3709215|PMID:17460091)
(MGI:3574008|PMID:15677725)
MGI PMID:15677725 PMID:17460091 MGI:3574008 MGI:3709215 NCBI chrNW_004936836:295,090...306,756 JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3607238|PMID:16145671) MGI PMID:16145671 MGI:3607238 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 acts_upstream_of_or_within ISO (MGI:3575344|PMID:15728829), (MGI:5528450|PMID:23006775) MGI PMID:15728829 PMID:23006775 MGI:3575344 MGI:5528450 NCBI chrNW_004936491:7,482,226...7,511,419 JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 acts_upstream_of_or_within ISO (MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:5470500 NCBI chrNW_004936599:3,257,329...3,259,614 JBrowse link
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3629534|PMID:15014133) MGI PMID:15014133 MGI:3629534 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:2662055|PMID:12741987) MGI PMID:12741987 MGI:2662055 NCBI chrNW_004936530:71,965...143,940 JBrowse link
G Boc BOC cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:3691957|PMID:17086203) MGI PMID:17086203 MGI:3691957 NCBI chrNW_004936536:813,984...890,766 JBrowse link
G Cdh4 cadherin 4 acts_upstream_of_or_within ISO (MGI:2679739|PMID:14586016) MGI PMID:14586016 MGI:2679739 NCBI chrNW_004936514:9,284,385...9,679,036 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:1347398|PMID:10545161) UniProt PMID:10545161 MGI:1347398 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Chl1 cell adhesion molecule L1 like acts_upstream_of_or_within ISO (MGI:2389546|PMID:12391163) MGI PMID:12391163 MGI:2389546 NCBI chrNW_004936577:471,766...547,769 JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (MGI:3801368|PMID:18550718) MGI PMID:18550718 MGI:3801368 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A acts_upstream_of_or_within ISO (MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:5470500 NCBI chrNW_004936546:2,658,195...2,945,542 JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO (MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:5430247 NCBI chrNW_004936504:4,898,947...4,927,195 JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:8861902 RGD:729062 NCBI chrNW_004936497:10,122,078...11,169,900 JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO (MGI:3722740|PMID:17804636) MGI PMID:17804636 MGI:3722740 NCBI chrNW_004936585:3,462,063...3,466,641 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:3832346|PMID:19150847) UniProt PMID:19150847 MGI:3832346 NCBI chrNW_004936474:561,822...571,817 JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO (MGI:2670488|PMID:12917357) MGI PMID:12917357 MGI:2670488 NCBI chrNW_004936728:892,814...923,089 JBrowse link
G Dscam DS cell adhesion molecule involved_in ISO (MGI:6274971|PMID:22685302) UniProt PMID:22685302 MGI:6274971 NCBI chrNW_004936500:2,686,847...3,339,110 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Edn3 endothelin 3 involved_in ISO (MGI:3784120|PMID:18401410) MGI PMID:18401410 MGI:3784120 NCBI chrNW_004936530:1,744,216...1,766,602 JBrowse link
G Ednra endothelin receptor type A involved_in ISO (MGI:3784120|PMID:18401410) MGI PMID:18401410 MGI:3784120 NCBI chrNW_004936535:1,950,117...2,005,786 JBrowse link
G Efna2 ephrin A2 ISO RGD PMID:17328773 RGD:2301727 NCBI chrNW_004936588:648,336...657,768 JBrowse link
G Efna5 ephrin A5 acts_upstream_of_or_within ISO (MGI:1931133|PMID:11222144)
(MGI:1261388|PMID:9614241)
MGI PMID:9614241 PMID:11222144 MGI:1261388 MGI:1931133 NCBI chrNW_004936531:2,217,467...2,267,265 JBrowse link
G Efnb1 ephrin B1 acts_upstream_of_or_within ISO (MGI:2153438|PMID:11731465) MGI PMID:11731465 MGI:2153438 NCBI chrNW_004936777:434,729...447,778 JBrowse link
G Efnb3 ephrin B3 acts_upstream_of_or_within ISO (MGI:2653388|PMID:12649481)
(MGI:2153438|PMID:11731465)
MGI PMID:11731465 PMID:12649481 MGI:2153438 MGI:2653388 NCBI chrNW_004936595:954,383...960,573 JBrowse link
G Enah ENAH actin regulator acts_upstream_of_or_within ISO (MGI:3054149|PMID:15371503)
(MGI:1331576|PMID:10069337), (MGI:3054149|PMID:15371503)
MGI PMID:10069337 PMID:15371503 MGI:1331576 MGI:3054149 NCBI chrNW_004936526:2,332,344...2,477,827 JBrowse link
G Epha4 EPH receptor A4 acts_upstream_of_or_within ISO (MGI:5464968|PMID:23144223)
(MGI:2653388|PMID:12649481)
MGI PMID:12649481 PMID:23144223 MGI:2653388 MGI:5464968 NCBI chrNW_004936569:3,539,269...3,670,322 JBrowse link
G Epha5 EPH receptor A5 involved_in ISO (MGI:2384261|PMID:12124402) UniProt PMID:12124402 MGI:2384261 NCBI chrNW_004936582:2,503,546...2,832,950 JBrowse link
G Epha8 EPH receptor A8 involved_in ISO (MGI:892883|PMID:9214628) UniProt PMID:9214628 MGI:892883 NCBI chrNW_004936474:7,928,700...7,981,961 JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within ISO (MGI:5604297|PMID:24997765)
(MGI:2675767|PMID:12971893)
(MGI:3716012|PMID:16701205)
(MGI:2149059|PMID:11532925)
MGI PMID:11532925 PMID:12971893 PMID:16701205 PMID:24997765 MGI:2149059 MGI:2675767 MGI:3716012 MGI:5604297 NCBI chrNW_004936529:8,006,780...8,261,923 JBrowse link
G Ephb2 EPH receptor B2 involved_in
acts_upstream_of_or_within
ISO (MGI:1859095|PMID:10839360), (MGI:84499|PMID:8947026)
(MGI:2149059|PMID:11532925)
UniProt
MGI
PMID:8947026 PMID:10839360 PMID:11532925 MGI:1859095 MGI:2149059 MGI:84499 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 acts_upstream_of_or_within
involved_in
ISO (MGI:2149059|PMID:11532925)
(MGI:1859095|PMID:10839360), (MGI:84499|PMID:8947026)
MGI
UniProt
PMID:8947026 PMID:10839360 PMID:11532925 MGI:1859095 MGI:2149059 MGI:84499 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Etv1 ETS variant transcription factor 1 acts_upstream_of_or_within ISO (MGI:2183841|PMID:10850491) MGI PMID:10850491 MGI:2183841 NCBI chrNW_004936546:742,586...832,972 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (MGI:2679928|PMID:14605369)
(MGI:5311271|PMID:21743013)
MGI PMID:14605369 PMID:21743013 MGI:2679928 MGI:5311271 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Fezf1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (MGI:3621093|PMID:16540508) MGI PMID:16540508 MGI:3621093 NCBI chrNW_004936605:3,027,138...3,030,442 JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (MGI:5486433|PMID:21673655) MGI PMID:21673655 MGI:5486433 NCBI chrNW_004936488:13,372,889...13,457,586 JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5688822|PMID:24560577)
PMID:21673655
UniProt
MGI
PMID:21673655 PMID:24560577 MGI:5688822 RGD:8554719 NCBI chrNW_004936485:5,532,554...5,547,430 JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (MGI:1353240|PMID:10662636) MGI PMID:10662636 MGI:1353240 NCBI chrNW_004936536:2,995,654...3,091,079 JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (MGI:1928163|PMID:11135239) MGI PMID:11135239 MGI:1928163 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (MGI:2179161|PMID:11967891) MGI PMID:11967891 MGI:2179161 NCBI chrNW_004936525:1,870,211...1,873,536 JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO (MGI:2662801|PMID:12639970) MGI PMID:12639970 MGI:2662801 NCBI chrNW_004936493:10,808,714...10,812,761 JBrowse link
G Gfra3 GDNF family receptor alpha 3 acts_upstream_of_or_within ISO (MGI:1344239|PMID:10482239)
(MGI:2183092|PMID:12160745)
MGI PMID:10482239 PMID:12160745 MGI:1344239 MGI:2183092 NCBI chrNW_004936531:7,443,842...7,457,518 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (MGI:1340208|PMID:10409510) MGI PMID:10409510 MGI:1340208 NCBI chrNW_004936469:49,616,552...49,788,760 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:3628676|PMID:15065125)
(MGI:4837563|PMID:20943929)
MGI PMID:15065125 PMID:20943929 MGI:3628676 MGI:4837563 NCBI chrNW_004936478:17,129,922...17,403,630 JBrowse link
G Klf7 Kruppel like factor 7 acts_upstream_of_or_within ISO (MGI:3581378|PMID:15964824) MGI PMID:15964824 MGI:3581378 NCBI chrNW_004936631:3,327,555...3,412,206 JBrowse link
G L1cam L1 cell adhesion molecule involved_in
acts_upstream_of_or_within
ISO (PMID:24155914)
(MGI:3801368|PMID:18550718)
(MGI:3804601|PMID:18650339)
(MGI:2449891|PMID:12533613), (MGI:3801368|PMID:18550718)
UniProt
MGI
PMID:12533613 PMID:18550718 PMID:18650339 PMID:24155914 MGI:2449891 MGI:3801368 MGI:3804601 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Lama2 laminin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:3850905 NCBI chrNW_004936639:259,662...825,170 JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:3850905 NCBI chrNW_004936529:826,178...841,304 JBrowse link
G Lgi1 leucine rich glioma inactivated 1 involved_in ISO (PMID:20463223) DFLAT PMID:20463223 NCBI chrNW_004936601:1,242,022...1,275,842 JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
ISO (MGI:5319439|PMID:22457488)
(MGI:3714686|PMID:17493606)
CACAO
MGI
PMID:17493606 PMID:22457488 MGI:3714686 MGI:5319439 NCBI chrNW_004936487:12,395,817...12,413,860 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO (MGI:3051929|PMID:15183721) MGI PMID:15183721 MGI:3051929 NCBI chrNW_004936481:19,863,487...19,984,299 JBrowse link
G LOC101960864 group 10 secretory phospholipase A2 acts_upstream_of_or_within ISO (PMID:15927955) MGI PMID:15927955 NCBI chrNW_004936501:2,841,209...2,857,570 JBrowse link
G LOC101973767 vasodilator stimulated phosphoprotein acts_upstream_of_or_within ISO (MGI:3054149|PMID:15371503) MGI PMID:15371503 MGI:3054149 NCBI chrNW_004936706:1,923,172...1,945,046 JBrowse link
G LOC101976516 olfactory receptor 10A4 acts_upstream_of_or_within ISO (MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:5014119 NCBI chrNW_004936841:254,035...255,004 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO (MGI:3527288|PMID:15572149) MGI PMID:15572149 MGI:3527288 NCBI chrNW_004936694:2,223,020...2,263,388 JBrowse link
G Matn2 matrilin 2 acts_upstream_of_or_within ISO (MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:3850905 NCBI chrNW_004936470:44,768,048...44,905,204 JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:3581503|PMID:15880105) MGI PMID:15880105 MGI:3581503 NCBI chrNW_004936595:1,697,283...1,832,571 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:15328010 RGD:1599806 NCBI chrNW_004936542:4,501,081...4,602,338 JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (MGI:2670323|PMID:12895419), (MGI:3056020|PMID:15328020) MGI PMID:12895419 PMID:15328020 MGI:2670323 MGI:3056020 NCBI chrNW_004936563:3,348,052...3,350,623 JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within ISO (MGI:3510083|PMID:15479642) MGI PMID:15479642 MGI:3510083 NCBI chrNW_004936557:7,345,813...7,437,654 JBrowse link
G Ngfr nerve growth factor receptor acts_upstream_of_or_within ISO (MGI:2178912|PMID:11978834) MGI PMID:11978834 MGI:2178912 NCBI chrNW_004936490:12,038,500...12,057,257 JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (MGI:2157787|PMID:11830575) MGI PMID:11830575 MGI:2157787 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (MGI:3653290|PMID:12435358) MGI PMID:12435358 MGI:3653290 NCBI chrNW_004936490:6,262,651...6,264,069 JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (MGI:3056852|PMID:15456880) MGI PMID:15456880 MGI:3056852 NCBI chrNW_004936524:8,252,321...8,290,747 JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISO (MGI:2447374|PMID:12182881) UniProt PMID:12182881 MGI:2447374 NCBI chrNW_004936653:1,167,055...1,238,241 JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within ISO (MGI:3578029|PMID:15814794)
(MGI:3525900|PMID:15604101), (MGI:3578029|PMID:15814794)
(MGI:3505728|PMID:12852851)
MGI PMID:12852851 PMID:15604101 PMID:15814794 MGI:3505728 MGI:3525900 MGI:3578029 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Nrp2 neuropilin 2 acts_upstream_of_or_within ISO (MGI:3578029|PMID:15814794) RGD
MGI
PMID:9288754 PMID:15814794 MGI:3578029 RGD:633436 NCBI chrNW_004936631:2,106,378...2,222,082 JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (MGI:3576404|PMID:15550985)
(MGI:80051|PMID:8861722)
MGI PMID:8861722 PMID:15550985 MGI:3576404 MGI:80051 NCBI chrNW_004936709:2,163,510...2,223,429 JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (MGI:1861288|PMID:10908620), (MGI:3616408|PMID:16481423), (MGI:3758130|PMID:17898206)
(MGI:2181259|PMID:12051827), (MGI:2654974|PMID:12679031), (MGI:3691957|PMID:17086203)
MGI PMID:10908620 PMID:12051827 PMID:12679031 PMID:16481423 PMID:17086203 More... MGI:1861288 MGI:2181259 MGI:2654974 MGI:3616408 MGI:3691957 MGI:3758130 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18344912 RGD:5684394 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO (PMID:16267555) UniProt PMID:16267555 NCBI chrNW_004936495:1,433,124...1,449,409 JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO (MGI:2179161|PMID:11967891), (MGI:2679739|PMID:14586016) MGI PMID:11967891 PMID:14586016 MGI:2179161 MGI:2679739 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 ISO RGD PMID:10656251 RGD:727289 NCBI chrNW_004936479:10,625,989...10,634,058 JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO (MGI:2152659|PMID:11683995) MGI PMID:11683995 MGI:2152659 NCBI chrNW_004936809:1,209,787...1,226,726 JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:3578029 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO (MGI:1928568|PMID:11163266) MGI PMID:11163266 MGI:1928568 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Ptpro protein tyrosine phosphatase receptor type O involved_in ISO (MGI:5306568|PMID:19800005) UniProt PMID:19800005 MGI:5306568 NCBI chrNW_004936587:1,967,079...2,188,651 JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:3709518 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (MGI:3611655|PMID:16324103) MGI PMID:16324103 MGI:3611655 NCBI chrNW_004936479:19,628,488...20,088,278 JBrowse link
G Robo1 roundabout guidance receptor 1 acts_upstream_of_or_within ISO (MGI:3041390|PMID:15091338)
(MGI:3040153|PMID:15084255)
RGD
MGI
PMID:9458045 PMID:15084255 PMID:15091338 MGI:3040153 MGI:3041390 RGD:61733 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Robo2 roundabout guidance receptor 2 acts_upstream_of_or_within ISO (MGI:3041390|PMID:15091338) RGD
MGI
PMID:10102268 PMID:15091338 MGI:3041390 RGD:68763 NCBI chrNW_004936505:5,544,011...6,747,417 JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within
involved_in
ISO (MGI:3040153|PMID:15084255), (MGI:3047174|PMID:15233918)
(MGI:6316558|PMID:30843071)
MGI
UniProt
PMID:15084255 PMID:15233918 PMID:30843071 MGI:3040153 MGI:3047174 MGI:6316558 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
G Runx3 RUNX family transcription factor 3 acts_upstream_of_or_within ISO (MGI:2387717|PMID:12352981) MGI PMID:12352981 MGI:2387717 NCBI chrNW_004936474:9,751,946...9,802,910 JBrowse link
G Ryk receptor like tyrosine kinase involved_in ISO (MGI:3625635|PMID:16723543)
(MGI:4887339|PMID:16116452)
UniProt PMID:16116452 PMID:16723543 MGI:3625635 MGI:4887339 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within ISO (MGI:3778100|PMID:18354028) MGI PMID:18354028 MGI:3778100 NCBI chrNW_004936570:1,187,916...1,195,423 JBrowse link
G Sema3c semaphorin 3C involved_in ISO (MGI:5315341|PMID:17021275) UniProt PMID:17021275 MGI:5315341 NCBI chrNW_004936810:903,306...1,063,024 JBrowse link
G Sema3f semaphorin 3F acts_upstream_of_or_within ISO (MGI:3653290|PMID:12435358)
(PMID:15814794)
MGI PMID:12435358 PMID:15814794 MGI:3653290 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
G Sema4f ssemaphorin 4F ISO RGD PMID:10051670 RGD:69991 NCBI chrNW_004936556:873,669...899,400 JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO (MGI:2447390|PMID:12506007) MGI PMID:12506007 MGI:2447390 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sema6a semaphorin 6A involved_in ISO (MGI:3607683|PMID:16205717) UniProt PMID:16205717 MGI:3607683 NCBI chrNW_004936742:1,599,725...1,726,084 JBrowse link
G Sema6b semaphorin 6B involved_in ISO (MGI:4454564|PMID:20484647) UniProt PMID:20484647 MGI:4454564 NCBI chrNW_004936588:2,642,730...2,654,520 JBrowse link
G Sema6c semaphorin 6C ISO RGD PMID:10049528 RGD:69992 NCBI chrNW_004936580:1,331,950...1,347,327 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:2654974|PMID:12679031)
(MGI:2662556|PMID:12756179), (MGI:3628676|PMID:15065125)
MGI PMID:12679031 PMID:12756179 PMID:15065125 MGI:2654974 MGI:2662556 MGI:3628676 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Slit1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11748139)
(MGI:3041390|PMID:15091338)
(MGI:2181259|PMID:12051827)
(MGI:3621682|PMID:11804571)
(MGI:2678272|PMID:12954717)
UniProt
MGI
PMID:11748139 PMID:11804571 PMID:12051827 PMID:12954717 PMID:15091338 MGI:2181259 MGI:2678272 MGI:3041390 MGI:3621682 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 involved_in
acts_upstream_of_or_within
ISO (PMID:11748139)
(MGI:3041390|PMID:15091338)
(MGI:3621682|PMID:11804571)
(MGI:2679928|PMID:14605369)
(MGI:2678272|PMID:12954717), (MGI:2683853|PMID:12879062)
UniProt
MGI
PMID:11748139 PMID:11804571 PMID:12879062 PMID:12954717 PMID:14605369 More... MGI:2678272 MGI:2679928 MGI:2683853 MGI:3041390 MGI:3621682 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slit3 slit guidance ligand 3 involved_in
acts_upstream_of_or_within
ISO (PMID:11748139)
(MGI:2678272|PMID:12954717)
UniProt
MGI
PMID:11748139 PMID:12954717 MGI:2678272 NCBI chrNW_004936622:191,165...756,552 JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO (MGI:4940418|PMID:21300867) MGI PMID:21300867 MGI:4940418 NCBI chrNW_004936497:12,242,869...12,278,012 JBrowse link
G Tenm2 teneurin transmembrane protein 2 involved_in ISO (PMID:21724987) UniProt PMID:21724987 NCBI chrNW_004936622:1,101,587...1,983,816 JBrowse link
G Tgfb2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (MGI:3522686|PMID:15528466) MGI PMID:15528466 MGI:3522686 NCBI chrNW_004936628:310,720...394,002 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO (MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:5014119 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
G Tubb3 tubulin beta 3 class III involved_in ISO (PMID:20074521)
(MGI:4441021|PMID:20074521), (MGI:5906064|PMID:28483977)
UniProt PMID:20074521 PMID:28483977 MGI:4441021 MGI:5906064 NCBI chrNW_004936641:184,736...193,835 JBrowse link
G Unc5a unc-5 netrin receptor A ISO RGD PMID:9126742 RGD:634450 NCBI chrNW_004936597:1,060,496...1,122,832 JBrowse link
G Unc5b unc-5 netrin receptor B acts_upstream_of_or_within ISO PMID:21673655 RGD
MGI
PMID:9126742 PMID:21673655 RGD:634450 RGD:8554719 NCBI chrNW_004936521:7,472,788...7,547,408 JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within
involved_in
ISO (MGI:5464968|PMID:23144223)
(MGI:6274971|PMID:22685302)
MGI
UniProt
PMID:22685302 PMID:23144223 MGI:5464968 MGI:6274971 NCBI chrNW_004936687:2,600,635...2,951,407 JBrowse link
G Unc5d unc-5 netrin receptor D acts_upstream_of_or_within ISO (MGI:5486433|PMID:21673655) MGI PMID:21673655 MGI:5486433 NCBI chrNW_004936973:28,551...71,710 JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (MGI:4418596|PMID:19706539) UniProt PMID:19706539 MGI:4418596 NCBI chrNW_004936571:4,537,461...4,600,238 JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (MGI:1350761|PMID:10601035) MGI PMID:10601035 MGI:1350761 NCBI chrNW_004936486:6,972,972...6,978,544 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4949958|PMID:21483795) UniProt PMID:21483795 MGI:4949958 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
axon midline choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:3051707|PMID:15240555) MGI PMID:15240555 MGI:3051707 NCBI chrNW_004936494:3,738,419...3,740,419 JBrowse link
G LOC101959175 amyloid beta precursor protein acts_upstream_of_or_within ISO (MGI:69837|PMID:8001115) MGI PMID:8001115 MGI:69837 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO PMID:18986510
(MGI:3823169|PMID:18986510)
UniProt PMID:18986510 MGI:3823169 RGD:2314842 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (MGI:3823169|PMID:18986510) UniProt PMID:18986510 MGI:3823169 NCBI chrNW_004936505:5,544,011...6,747,417 JBrowse link
G Robo3 roundabout guidance receptor 3 involved_in
acts_upstream_of_or_within
ISO (MGI:3823169|PMID:18986510)
(MGI:3834283|PMID:18466743)
UniProt
MGI
PMID:18466743 PMID:18986510 MGI:3823169 MGI:3834283 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT|acts_upstream_of_or_within ISO (MGI:70238|PMID:7798939) MGI PMID:7798939 MGI:70238 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoe apolipoprotein E NOT|acts_upstream_of_or_within ISO (MGI:70238|PMID:7798939) MGI PMID:7798939 MGI:70238 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:85682|PMID:9009190) MGI PMID:9009190 MGI:85682 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Chl1 cell adhesion molecule L1 like ISO RGD PMID:14707551 RGD:1303346 NCBI chrNW_004936577:471,766...547,769 JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 ISO RGD PMID:11069908 RGD:1298825 NCBI chrNW_004936596:1,235,550...1,251,100 JBrowse link
G Ctnna1 catenin alpha 1 ISO RGD PMID:12387456 RGD:632464 NCBI chrNW_004936531:7,865,907...8,036,020 JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:16228655 RGD:11537480 NCBI chrNW_004936529:1,099,510...1,171,587 JBrowse link
G Dhfr dihydrofolate reductase involved_in ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:4460071|PMID:20424322) BHF-UCL PMID:20424322 MGI:4460071 NCBI chrNW_004936498:1,489,916...1,497,200 JBrowse link
G Isl1 ISL LIM homeobox 1 ISO RGD PMID:10363827 RGD:2311122 NCBI chrNW_004936480:15,805,259...15,817,854 JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:15716400 RGD:1641846 NCBI chrNW_004936503:111,722...243,627 JBrowse link
G Jam3 junctional adhesion molecule 3 ISO RGD PMID:22950044 RGD:7488944 NCBI chrNW_004936684:1,689,594...1,762,066 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3772001|PMID:15233917) MGI PMID:15233917 MGI:3772001 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G LOC101956757 neuronal regeneration related protein ISO RGD PMID:15485502 RGD:1540387 NCBI chrNW_004936531:6,077,691...6,105,517 JBrowse link
G Mag myelin associated glycoprotein acts_upstream_of_or_within ISO (MGI:4845807|PMID:20731761) MGI PMID:20731761 MGI:4845807 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chrNW_004936694:2,223,020...2,263,388 JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004936484:16,087,924...16,180,089 JBrowse link
G Nefh neurofilament heavy chain ISO RGD PMID:10646539 RGD:9698439 NCBI chrNW_004936657:3,443,406...3,453,096 JBrowse link
G Nefm neurofilament medium chain ISO RGD PMID:15206821 RGD:9698447 NCBI chrNW_004936757:1,662,905...1,668,707 JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:16782282 RGD:1643108 NCBI chrNW_004936669:2,735,111...2,763,060 JBrowse link
G Vcan versican ISO RGD PMID:12526031 RGD:632591 NCBI chrNW_004936469:2,585,142...2,688,029 JBrowse link
axon target recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3511733|PMID:15464571) MGI PMID:15464571 MGI:3511733 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:1352733|PMID:10662642), (MGI:1931655|PMID:11170346) UniProt PMID:10662642 PMID:11170346 MGI:1352733 MGI:1931655 NCBI chrNW_004936471:20,934,524...20,935,584 JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (MGI:3046454|PMID:15182301) MGI PMID:15182301 MGI:3046454 NCBI chrNW_004936487:15,300,758...15,367,475 JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 acts_upstream_of_or_within ISO (MGI:66533|PMID:8474599) MGI PMID:8474599 MGI:66533 NCBI chrNW_004936482:8,551,749...8,563,586 JBrowse link
axonal fasciculation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amigo1 adhesion molecule with Ig like domain 1 involved_in ISO PMID:12629050 UniProt PMID:12629050 RGD:634626 NCBI chrNW_004936704:992,858...998,200 JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp6 caspase 6 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004936563:912,502...920,025 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:1347398|PMID:10545161) UniProt PMID:10545161 MGI:1347398 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 acts_upstream_of_or_within ISO (MGI:3578066|PMID:15778712) MGI PMID:15778712 MGI:3578066 NCBI chrNW_004936529:437,476...464,012 JBrowse link
G Cnr1 cannabinoid receptor 1 acts_upstream_of_or_within ISO (MGI:4837552|PMID:20962221) MGI PMID:20962221 MGI:4837552 NCBI chrNW_004936510:3,779,930...3,806,615 JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (MGI:3804601|PMID:18650339) MGI PMID:18650339 MGI:3804601 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within ISO (MGI:5086019|PMID:21817055) MGI PMID:21817055 MGI:5086019 NCBI chrNW_004936636:1,748,883...1,883,958 JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (MGI:84499|PMID:8947026) UniProt PMID:8947026 MGI:84499 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 involved_in ISO (MGI:84499|PMID:8947026) UniProt PMID:8947026 MGI:84499 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (MGI:3610776|PMID:16284245) MGI PMID:16284245 MGI:3610776 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004936612:1,262,557...1,556,281 JBrowse link
G Ncam2 neural cell adhesion molecule 2 ISO RGD PMID:15174086 RGD:1303997 NCBI chrNW_004936822:1,033,660...1,189,131 JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO (MGI:3582873|PMID:15972963) MGI PMID:15972963 MGI:3582873 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within ISO (MGI:3710026|PMID:17428830) MGI PMID:17428830 MGI:3710026 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:16150606 RGD:9590115 NCBI chrNW_004936605:3,195,893...3,368,102 JBrowse link
G Rtn4 reticulon 4 involved_in ISO PMID:20573699
(MGI:4830045|PMID:20573699)
UniProt PMID:20573699 MGI:4830045 RGD:8554113 NCBI chrNW_004936491:1,407,414...1,474,031 JBrowse link
G Sema5a semaphorin 5A involved_in ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004936476:13,125,269...13,194,205 JBrowse link
axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta ISO RGD PMID:12504890 RGD:728124 NCBI chrNW_004936765:667,107...670,627 JBrowse link
G Adcy1 adenylate cyclase 1 acts_upstream_of_or_within ISO (MGI:3699973|PMID:17229090) MGI PMID:17229090 MGI:3699973 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:27642048)
(MGI:3618456|PMID:2917690)
UniProt
MGI
PMID:2917690 PMID:27642048 MGI:3618456 NCBI chrNW_004936626:150,953...189,980 JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO RGD PMID:16802292 RGD:1599082 NCBI chrNW_004936726:940,696...1,015,771 JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 ISO RGD PMID:12629050 RGD:634626 NCBI chrNW_004936704:992,858...998,200 JBrowse link
G Ank3 ankyrin 3 involved_in ISO (MGI:5426783|PMID:11724816) BHF-UCL PMID:11724816 MGI:5426783 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223)
(MGI:3047466|PMID:15207235), (MGI:3806438|PMID:18716223)
MGI PMID:15207235 PMID:18716223 MGI:3047466 MGI:3806438 NCBI chrNW_004936531:6,899,580...7,019,016 JBrowse link
G Atl1 atlastin GTPase 1 involved_in ISO PMID:16537571 UniProt PMID:16537571 RGD:8553504 NCBI chrNW_004936495:14,984,761...15,053,188 JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO (MGI:3578473|PMID:15664173) MGI PMID:15664173 MGI:3578473 NCBI chrNW_004936604:3,023,781...3,110,104 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:85682|PMID:9009190) MGI PMID:9009190 MGI:85682 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (MGI:4462353|PMID:17482548) UniProt PMID:17482548 MGI:4462353 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO (MGI:4462353|PMID:17482548) UniProt PMID:17482548 MGI:4462353 NCBI chrNW_004936816:307,736...335,953 JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO (MGI:3608035|PMID:16155113) MGI PMID:16155113 MGI:3608035 NCBI chrNW_004936721:1,078,570...1,106,153 JBrowse link
G Cck cholecystokinin acts_upstream_of_or_within ISO (MGI:3573824|PMID:15152034) MGI PMID:15152034 MGI:3573824 NCBI chrNW_004936695:2,776,705...2,782,280 JBrowse link
G Cckar cholecystokinin A receptor acts_upstream_of_or_within ISO (MGI:3573824|PMID:15152034) MGI PMID:15152034 MGI:3573824 NCBI chrNW_004936477:3,306,898...3,314,659 JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (MGI:1928548|PMID:11163260) MGI PMID:11163260 MGI:1928548 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Cntn2 contactin 2 ISO RGD PMID:2317872 RGD:727707 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO (MGI:6269164|PMID:28370195) MGI PMID:28370195 MGI:6269164 NCBI chrNW_004936490:17,412,837...17,430,123 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6269164|PMID:28370195) MGI PMID:28370195 MGI:6269164 NCBI chrNW_004936527:2,859,442...4,748,885 JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (MGI:2179186|PMID:11988169) MGI PMID:11988169 MGI:2179186 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:3654578|PMID:16691566) UniProt PMID:16691566 MGI:3654578 NCBI chrNW_004936556:5,205,481...6,271,304 JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (MGI:3614627|PMID:16387639) MGI PMID:16387639 MGI:3614627 NCBI chrNW_004936472:29,958,716...30,287,798 JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO (MGI:2449888|PMID:12533617) MGI PMID:12533617 MGI:2449888 NCBI chrNW_004936585:3,462,063...3,466,641 JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (PMID:16982419) BHF-UCL PMID:16982419 NCBI chrNW_004936692:161,979...354,028 JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (MGI:2136539|PMID:11438590) MGI PMID:11438590 MGI:2136539 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO (MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:2137781 NCBI chrNW_004936728:892,814...923,089 JBrowse link
G Dst dystonin acts_upstream_of_or_within ISO (MGI:60062|PMID:1634998) MGI PMID:1634998 MGI:60062 NCBI chrNW_004936476:4,344,673...4,772,892 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3028427|PMID:14734535) MGI PMID:14734535 MGI:3028427 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:9030624 RGD:68774 NCBI chrNW_004936646:497,783...515,247 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:3763776|PMID:17951031) MGI PMID:17951031 MGI:3763776 NCBI chrNW_004936486:10,506,680...10,606,272 JBrowse link
G Flot1 flotillin 1 acts_upstream_of_or_within ISO (MGI:3847013|PMID:19458231) MGI PMID:19458231 MGI:3847013 NCBI chrNW_004936837:387,012...401,076 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:16845384 RGD:1624300 NCBI chrNW_004936483:4,563,995...4,860,231 JBrowse link
G Kalrn kalirin RhoGEF kinase ISO RGD PMID:12177196 RGD:628431 NCBI chrNW_004936725:749,382...1,020,702 JBrowse link
G Klf7 Kruppel like factor 7 acts_upstream_of_or_within ISO (MGI:3581378|PMID:15964824) MGI PMID:15964824 MGI:3581378 NCBI chrNW_004936631:3,327,555...3,412,206 JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936741:1,770,797...1,784,716 JBrowse link
G LOC101959175 amyloid beta precursor protein acts_upstream_of_or_within ISO (MGI:3606204|PMID:9390996) MGI PMID:9390996 MGI:3606204 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G LOC101962838 2',3'-cyclic nucleotide 3' phosphodiesterase acts_upstream_of_or_within ISO (MGI:3050897|PMID:12590258) MGI PMID:12590258 MGI:3050897 NCBI chrNW_004936490:16,834,570...16,841,734 JBrowse link
G Map1b microtubule associated protein 1B acts_upstream_of_or_within ISO (MGI:3614337|PMID:11891784) MGI PMID:11891784 MGI:3614337 NCBI chrNW_004936549:4,266,371...4,371,579 JBrowse link
G Map2 microtubule associated protein 2 acts_upstream_of_or_within ISO (MGI:3614337|PMID:11891784), (MGI:4836447|PMID:20600662) MGI PMID:11891784 PMID:20600662 MGI:3614337 MGI:4836447 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Mapt microtubule associated protein tau acts_upstream_of_or_within ISO (MGI:3614337|PMID:11891784) MGI PMID:11891784 MGI:3614337 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1933038|PMID:11283949) MGI PMID:11283949 MGI:1933038 NCBI chrNW_004936595:1,697,283...1,832,571 JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO (MGI:3530392|PMID:15649943), (MGI:3582873|PMID:15972963) MGI PMID:15649943 PMID:15972963 MGI:3530392 MGI:3582873 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Nkx2-8 NK2 homeobox 8 acts_upstream_of_or_within ISO (MGI:3607408|PMID:16267219) MGI PMID:16267219 MGI:3607408 NCBI chrNW_004936494:10,580,445...10,581,798 JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:3526784|PMID:15598981)
(MGI:3604921|PMID:16120638)
MGI PMID:15598981 PMID:16120638 MGI:3526784 MGI:3604921 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (MGI:1861288|PMID:10908620) MGI PMID:10908620 MGI:1861288 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Ntng1 netrin G1 acts_upstream_of_or_within ISO (MGI:2158548|PMID:11804778) MGI PMID:11804778 MGI:2158548 NCBI chrNW_004936731:844,718...1,184,179 JBrowse link
G Ntng2 netrin G2 acts_upstream_of_or_within ISO (MGI:2158548|PMID:11804778) MGI PMID:11804778 MGI:2158548 NCBI chrNW_004936487:18,779,470...18,838,245 JBrowse link
G Numb NUMB endocytic adaptor protein acts_upstream_of_or_within ISO (MGI:3526784|PMID:15598981) MGI PMID:15598981 MGI:3526784 NCBI chrNW_004936488:2,579,017...2,742,961 JBrowse link
G Numbl NUMB like endocytic adaptor protein acts_upstream_of_or_within ISO (MGI:3526784|PMID:15598981) MGI PMID:15598981 MGI:3526784 NCBI chrNW_004936661:2,962,741...2,984,763 JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in ISO (MGI:4940954|PMID:21115725) UniProt PMID:21115725 MGI:4940954 NCBI chrNW_004936499:4,079,127...4,328,580 JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO (MGI:3513567|PMID:15514979) MGI PMID:15514979 MGI:3513567 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO PMID:18842885
(MGI:4418607|PMID:18842885)
BHF-UCL PMID:18842885 MGI:4418607 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO (MGI:3037391|PMID:14741049) MGI PMID:14741049 MGI:3037391 NCBI chrNW_004936588:2,070,873...2,088,144 JBrowse link
G Pitpna phosphatidylinositol transfer protein alpha involved_in ISO (MGI:4839451|PMID:16244667) BHF-UCL PMID:16244667 MGI:4839451 NCBI chrNW_004936538:7,663,457...7,704,484 JBrowse link
G Plppr4 phospholipid phosphatase related 4 ISO RGD PMID:12730698 RGD:1299556 NCBI chrNW_004936537:462,595...503,770 JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO (MGI:2429619|PMID:10357904) MGI PMID:10357904 MGI:2429619 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (MGI:2447085|PMID:12482708) MGI PMID:12482708 MGI:2447085 NCBI chrNW_004936668:2,602,261...2,687,903 JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 acts_upstream_of_or_within ISO (MGI:1336768|PMID:10234020), (MGI:2665215|PMID:12700241) MGI PMID:10234020 PMID:12700241 MGI:1336768 MGI:2665215 NCBI chrNW_004936605:3,195,893...3,368,102 JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936493:6,263,870...6,351,327 JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3762126|PMID:11359932) MGI PMID:11359932 MGI:3762126 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936596:4,385,788...4,403,393 JBrowse link
G Rnf165 ring finger protein 165 acts_upstream_of_or_within ISO (MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:5499270 NCBI chrNW_004936517:428,689...531,360 JBrowse link
G Rtn4r reticulon 4 receptor acts_upstream_of_or_within ISO (MGI:1933685|PMID:11201742) MGI PMID:11201742 MGI:1933685 NCBI chrNW_004936619:4,130,757...4,155,885 JBrowse link
G Ryk receptor like tyrosine kinase acts_upstream_of_or_within ISO (MGI:3510085|PMID:15454084) MGI PMID:15454084 MGI:3510085 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Sema4a semaphorin 4A involved_in ISO (MGI:5315684|PMID:20043131) UniProt PMID:20043131 MGI:5315684 NCBI chrNW_004936580:5,404,380...5,431,183 JBrowse link
G Shtn1 shootin 1 involved_in
acts_upstream_of_or_within
ISO PMID:17439943
PMID:17030985
HGNC-UCL
MGI
PMID:17030985 PMID:17439943 RGD:8554246 RGD:8554472 NCBI chrNW_004936486:6,786,037...6,867,221 JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO (MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:3626138 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:3626138 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:2677606 NCBI chrNW_004936696:1,447,644...1,452,612 JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:2677606 NCBI chrNW_004936513:2,961,842...2,969,938 JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:2677606 NCBI chrNW_004936707:1,315,267...1,324,793 JBrowse link
G Slitrk4 SLIT and NTRK like family member 4 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:2677606 NCBI chrNW_004936513:4,742,743...4,750,633 JBrowse link
G Slitrk5 SLIT and NTRK like family member 5 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:2677606 NCBI chrNW_004936472:20,698,334...20,706,161 JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:2677606 NCBI chrNW_004936866:412,719...419,381 JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:15478103 RGD:1581079 NCBI chrNW_004936485:9,198,744...9,279,854 JBrowse link
G Snap91 synaptosome associated protein 91 involved_in ISO PMID:18842885 BHF-UCL PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within ISO (MGI:60062|PMID:1634998) MGI PMID:1634998 MGI:60062 NCBI chrNW_004936661:2,831,132...2,903,619 JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (MGI:4462353|PMID:17482548) RGD
UniProt
PMID:12114407 PMID:17482548 MGI:4462353 RGD:2291948 NCBI chrNW_004936588:579,816...601,033 JBrowse link
G Stmn1 stathmin 1 acts_upstream_of_or_within ISO (MGI:2158550|PMID:11839567) MGI PMID:11839567 MGI:2158550 NCBI chrNW_004936474:10,470,006...10,475,557 JBrowse link
G Taok2 TAO kinase 2 involved_in ISO (PMID:22683681)
(MGI:5462161|PMID:22683681)
ARUK-UCL PMID:22683681 MGI:5462161 NCBI chrNW_004936501:12,477,032...12,495,298 JBrowse link
G Tbce tubulin folding cofactor E acts_upstream_of_or_within ISO (MGI:2446402|PMID:12446740) MGI PMID:12446740 MGI:2446402 NCBI chrNW_004936484:17,048,187...17,097,414 JBrowse link
G Tnn tenascin N acts_upstream_of_or_within ISO (MGI:2664472|PMID:12812753) MGI PMID:12812753 MGI:2664472 NCBI chrNW_004936481:13,085,325...13,149,840 JBrowse link
G Top2b DNA topoisomerase II beta acts_upstream_of_or_within ISO (MGI:2178151|PMID:10615047) MGI PMID:10615047 MGI:2178151 NCBI chrNW_004936473:17,146,576...17,189,589 JBrowse link
G Trim46 tripartite motif containing 46 acts_upstream_of_or_within ISO (MGI:5708763|PMID:26671463) MGI PMID:26671463 MGI:5708763 NCBI chrNW_004936580:4,678,855...4,690,222 JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 acts_upstream_of_or_within ISO (MGI:50250|PMID:1630580) MGI PMID:1630580 MGI:50250 NCBI chrNW_004936482:8,551,749...8,563,586 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:3037621|PMID:15014045) MGI PMID:15014045 MGI:3037621 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Vax2 ventral anterior homeobox 2 acts_upstream_of_or_within ISO (MGI:2157790|PMID:11830579) MGI PMID:11830579 MGI:2157790 NCBI chrNW_004936491:15,079,446...15,110,238 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3510085|PMID:15454084) MGI PMID:15454084 MGI:3510085 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:23517308 MGI:5707582 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 involved_in ISO (MGI:5775247|PMID:26232532) UniProt PMID:26232532 MGI:5775247 NCBI chrNW_004936568:4,959,796...5,052,254 JBrowse link
axonogenesis involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col25a1 collagen type XXV alpha 1 chain acts_upstream_of_or_within ISO (MGI:5553181|PMID:24453327) MGI PMID:24453327 MGI:5553181 NCBI chrNW_004936563:105,551...557,682 JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO (MGI:6304148|PMID:30735130) MGI PMID:30735130 MGI:6304148 NCBI chrNW_004936474:7,034,134...7,083,005 JBrowse link
G Edn1 endothelin 1 involved_in ISO (MGI:6304148|PMID:30735130)
(MGI:6100594|PMID:24875861)
MGI PMID:24875861 PMID:30735130 MGI:6100594 MGI:6304148 NCBI chrNW_004936534:885,489...892,292 JBrowse link
G Ednra endothelin receptor type A involved_in ISO (MGI:6100594|PMID:24875861)
(MGI:6100594|PMID:24875861), (MGI:6304148|PMID:30735130)
MGI PMID:24875861 PMID:30735130 MGI:6100594 MGI:6304148 NCBI chrNW_004936535:1,950,117...2,005,786 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:3714212|PMID:17557302) MGI PMID:17557302 MGI:3714212 NCBI chrNW_004936477:21,591,772...21,606,289 JBrowse link
G Itga4 integrin subunit alpha 4 ISO RGD PMID:16181811 RGD:13593536 NCBI chrNW_004936509:10,215,283...10,293,653 JBrowse link
G Nptx1 neuronal pentraxin 1 acts_upstream_of_or_within ISO (MGI:3626127|PMID:16763034) MGI PMID:16763034 MGI:3626127 NCBI chrNW_004936594:4,373,500...4,384,394 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:5437554 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISO (MGI:83009|PMID:8815902) UniProt PMID:8815902 MGI:83009 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
basal dendrite arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:5462161 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Taok2 TAO kinase 2 involved_in ISO PMID:22683681
(MGI:5462161|PMID:22683681)
ARUK-UCL PMID:22683681 MGI:5462161 RGD:13461760 NCBI chrNW_004936501:12,477,032...12,495,298 JBrowse link
basal dendrite development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:5462161 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
basal dendrite morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taok2 TAO kinase 2 involved_in ISO PMID:22683681
(MGI:5462161|PMID:22683681)
ARUK-UCL PMID:22683681 MGI:5462161 RGD:13461760 NCBI chrNW_004936501:12,477,032...12,495,298 JBrowse link
branchiomotor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO (MGI:3776727|PMID:18031680) MGI PMID:18031680 MGI:3776727 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Plxna3 plexin A3 involved_in ISO (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chrNW_004936809:1,209,787...1,226,726 JBrowse link
G Plxna4 plexin A4 involved_in ISO (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (MGI:3603707|PMID:15548218) MGI PMID:15548218 MGI:3603707 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prom1 prominin 1 involved_in ISO (PMID:18654668)
(MGI:3838023|PMID:19228982)
BHF-UCL
UniProt
PMID:18654668 PMID:19228982 MGI:3838023 NCBI chrNW_004936477:11,878,261...12,017,228 JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO (MGI:4437581|PMID:20300562) MGI PMID:20300562 MGI:4437581 NCBI chrNW_004936581:642,322...644,286 JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in ISO (MGI:5693671|PMID:26287463) UniProt PMID:26287463 MGI:5693671 NCBI chrNW_004936655:682,132...928,886 JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chrNW_004936473:18,550,489...18,645,470 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO (MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:5014119 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chrNW_004936569:1,474,693...1,480,562 JBrowse link
canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (MGI:5705221|PMID:19951692) ParkinsonsUK-UCL PMID:19951692 MGI:5705221 NCBI chrNW_004936512:6,781,001...6,785,358 JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874) ParkinsonsUK-UCL PMID:20018874 NCBI chrNW_004936589:1,825,209...1,866,898 JBrowse link
cardiac neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:12486170 RGD:628409 NCBI chrNW_004936748:785,491...802,791 JBrowse link
cell morphogenesis involved in neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:3654570|PMID:16691564) MGI PMID:16691564 MGI:3654570 NCBI chrNW_004936494:3,738,419...3,740,419 JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:2149154|PMID:11500373) MGI PMID:11500373 MGI:2149154 NCBI chrNW_004936711:640,002...642,580 JBrowse link
G Hexa hexosaminidase subunit alpha acts_upstream_of_or_within ISO (MGI:3033296|PMID:14972652) MGI PMID:14972652 MGI:3033296 NCBI chrNW_004936471:31,712,485...31,738,273 JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:5487734|PMID:23264561) MGI PMID:23264561 MGI:5487734 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3804505|PMID:18599437) Alzheimers_University_of_Toronto PMID:18599437 MGI:3804505 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:1344237 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO (MGI:3776727|PMID:18031680) MGI PMID:18031680 MGI:3776727 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (MGI:3664376|PMID:7958874) MGI PMID:7958874 MGI:3664376 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
G Slc1a3 solute carrier family 1 member 3 acts_upstream_of_or_within ISO (MGI:1202024|PMID:9753165) MGI PMID:9753165 MGI:1202024 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
G Spr sepiapterin reductase acts_upstream_of_or_within ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link
G Tbcd tubulin folding cofactor D involved_in ISO (PMID:27666374) UniProt PMID:27666374 NCBI chrNW_004936923:239,029...366,503 JBrowse link
G Unk unk zinc finger involved_in
acts_upstream_of_or_within
ISO (PMID:25737280)
(MGI:5630004|PMID:25737280)
UniProt
MGI
PMID:25737280 MGI:5630004 NCBI chrNW_004936594:967,386...1,005,085 JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO (MGI:3610767|PMID:16357211) MGI PMID:16357211 MGI:3610767 NCBI chrNW_004936558:3,552,909...3,581,212 JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within ISO (MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:3056242 NCBI chrNW_004936549:2,685,953...2,977,754 JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:4829568|PMID:20577052) MGI PMID:20577052 MGI:4829568 NCBI chrNW_004936602:1,938,720...2,179,239 JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004936514:4,719,198...4,736,638 JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004936682:1,535,617...1,590,723 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3721829|PMID:12097474) MGI PMID:12097474 MGI:3721829 NCBI chrNW_004936580:4,165,255...4,179,285 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:6148478 NCBI chrNW_004936835:316,767...321,999 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:6148478 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (MGI:3047464|PMID:15208636) MGI PMID:15208636 MGI:3047464 NCBI chrNW_004936595:1,656,956...1,692,775 JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004936541:6,231,604...6,488,201 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:3056242 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3615742|PMID:15169849)
(MGI:3639051|PMID:16469766)
MGI PMID:15169849 PMID:16469766 MGI:3615742 MGI:3639051 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:65000|PMID:8174230) MGI PMID:8174230 MGI:65000 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:4418391|PMID:20020054) MGI PMID:20020054 MGI:4418391 NCBI chrNW_004936567:1,310,525...1,314,469 JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (MGI:1889058|PMID:8855328) MGI PMID:8855328 MGI:1889058 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:3639840|PMID:16680166) MGI PMID:16680166 MGI:3639840 NCBI chrNW_004936494:3,738,419...3,740,419 JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004936482:13,219,962...13,593,868 JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO (MGI:1339230|PMID:10357893) MGI PMID:10357893 MGI:1339230 NCBI chrNW_004936798:406,258...414,785 JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISO (PMID:23332916) UniProt PMID:23332916 NCBI chrNW_004936524:3,730,833...3,742,526 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (MGI:1321418|PMID:9886073) MGI PMID:9886073 MGI:1321418 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (MGI:3722980|PMID:17726113) MGI PMID:17726113 MGI:3722980 NCBI chrNW_004936471:34,657,073...34,729,662 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (MGI:3694852|PMID:17151281) MGI PMID:17151281 MGI:3694852 NCBI chrNW_004936487:14,513,303...14,587,771 JBrowse link
G LOC101968976 leptin acts_upstream_of_or_within ISO (MGI:1351081|PMID:10592285) MGI PMID:10592285 MGI:1351081 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G Map2 microtubule associated protein 2 involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (MGI:3612224|PMID:16410412) MGI PMID:16410412 MGI:3612224 NCBI chrNW_004936563:3,348,052...3,350,623 JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO (MGI:5789071|PMID:27223325) UniProt PMID:27223325 MGI:5789071 NCBI chrNW_004936706:2,261,737...2,282,922 JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004936478:1,289,437...1,296,819 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:1343962|PMID:8402890) UniProt PMID:8402890 MGI:1343962 NCBI chrNW_004936680:267,850...621,467 JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISO (MGI:4454735|PMID:20399730) UniProt PMID:20399730 MGI:4454735 NCBI chrNW_004936495:10,636,762...10,729,060 JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chrNW_004936542:3,567,469...3,571,393 JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO (MGI:3790890|PMID:18215621) MGI PMID:18215621 MGI:3790890 NCBI chrNW_004936604:3,023,781...3,110,104 JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO (MGI:1306866|PMID:9806922) MGI PMID:9806922 MGI:1306866 NCBI chrNW_004936478:3,721,662...3,724,471 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO (MGI:3721195|PMID:17670789) MGI PMID:17670789 MGI:3721195 NCBI chrNW_004936481:19,863,487...19,984,299 JBrowse link
G LOC101960999 voltage-dependent P/Q-type calcium channel subunit alpha-1A acts_upstream_of_or_within ISO (MGI:55090|PMID:6945603) MGI PMID:6945603 MGI:55090 NCBI chrNW_004936659:2,201,606...2,269,625 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chrNW_004936589:2,280,803...2,390,179 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:1344237 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (MGI:4360136|PMID:19592574) MGI PMID:19592574 MGI:4360136 NCBI chrNW_004936738:318,020...322,869 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within ISO (MGI:1928583|PMID:11113533) MGI PMID:11113533 MGI:1928583 NCBI chrNW_004936469:21,912,118...21,920,486 JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (MGI:84546|PMID:8955272)
(MGI:83320|PMID:8876243)
MGI PMID:8876243 PMID:8955272 MGI:83320 MGI:84546 NCBI chrNW_004936511:2,857,017...2,859,705 JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:3624182|PMID:16571630) MGI PMID:16571630 MGI:3624182 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (MGI:3790890|PMID:18215621) MGI PMID:18215621 MGI:3790890 NCBI chrNW_004936548:3,213,305...3,599,876 JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 acts_upstream_of_or_within ISO (PMID:10640720) UniProt PMID:10640720 NCBI chrNW_004936597:4,000,433...4,493,920 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (MGI:3841503|PMID:19286674) MGI PMID:19286674 MGI:3841503 NCBI chrNW_004936606:3,209,170...3,278,809 JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3527366|PMID:15608630)
(MGI:2181503|PMID:11344259), (MGI:2683795|PMID:14687550)
MGI PMID:11344259 PMID:14687550 PMID:15608630 MGI:2181503 MGI:2683795 MGI:3527366 NCBI chrNW_004936580:4,165,255...4,179,285 JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:3614628 NCBI chrNW_004936472:29,958,716...30,287,798 JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:3614628 NCBI chrNW_004936499:3,905,262...4,004,457 JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within ISO (MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:2675767 NCBI chrNW_004936529:8,006,780...8,261,923 JBrowse link
G Ephb2 EPH receptor B2 acts_upstream_of_or_within ISO (MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:2675767 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 acts_upstream_of_or_within ISO (MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:2675767 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3759703|PMID:17901218)
(MGI:3776727|PMID:18031680)
UniProt
MGI
PMID:17901218 PMID:18031680 MGI:3759703 MGI:3776727 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within ISO (MGI:1350702|PMID:10585298) MGI PMID:10585298 MGI:1350702 NCBI chrNW_004936469:21,912,118...21,920,486 JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chrNW_004936749:1,819,491...1,827,440 JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within ISO (MGI:3708238|PMID:17197442) MGI PMID:17197442 MGI:3708238 NCBI chrNW_004936661:2,831,132...2,903,619 JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:1275896 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004936475:2,493,280...2,496,738 JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004936687:20,126...1,421,075 JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (MGI:3769586|PMID:17984326) MGI PMID:17984326 MGI:3769586 NCBI chrNW_004936486:19,287,468...19,341,127 JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004936592:644,618...679,615 JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (MGI:5436217|PMID:21800304) MGI PMID:21800304 MGI:5436217 NCBI chrNW_004936659:2,065,410...2,136,898 JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chrNW_004936628:4,185,712...4,240,680 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) MGI PMID:10624947 MGI:1351063 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (MGI:1195230|PMID:9405095) MGI PMID:9405095 MGI:1195230 NCBI chrNW_004936898:45,903...70,313 JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (MGI:3822695|PMID:19074029) MGI PMID:19074029 MGI:3822695 NCBI chrNW_004936538:7,581,453...7,609,543 JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (MGI:3822695|PMID:19074029) MGI PMID:19074029 MGI:3822695 NCBI chrNW_004936619:2,447,686...2,479,589 JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (MGI:5703669|PMID:26609159) MGI PMID:26609159 MGI:5703669 NCBI chrNW_004936661:2,208,852...2,234,660 JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:1275896 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:71790|PMID:2473662) MGI PMID:2473662 MGI:71790 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO (MGI:3510013|PMID:10973246) MGI PMID:10973246 MGI:3510013 NCBI chrNW_004936558:4,127,477...4,188,307 JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO (MGI:4830814|PMID:20153830) MGI PMID:20153830 MGI:4830814 NCBI chrNW_004936888:554,859...557,759 JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004936512:7,544,047...7,575,922 JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (MGI:5306536|PMID:22133810) MGI PMID:22133810 MGI:5306536 NCBI chrNW_004936589:4,120,162...4,661,258 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (MGI:4461108|PMID:20041218) MGI PMID:20041218 MGI:4461108 NCBI chrNW_004936471:24,142,227...24,330,966 JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO (MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:3718715 NCBI chrNW_004936600:3,714,630...3,728,813 JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:3718715 NCBI chrNW_004936490:1,324,378...1,332,177 JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO (MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:3718715 NCBI chrNW_004936668:3,246,456...3,255,353 JBrowse link
G LOC101960999 voltage-dependent P/Q-type calcium channel subunit alpha-1A acts_upstream_of_or_within ISO (MGI:62667|PMID:1306163)
(MGI:1347769|PMID:10630211)
(MGI:68980|PMID:7834360)
MGI PMID:1306163 PMID:7834360 PMID:10630211 MGI:1347769 MGI:62667 MGI:68980 NCBI chrNW_004936659:2,201,606...2,269,625 JBrowse link
G LOC101976627 prosaposin acts_upstream_of_or_within ISO (MGI:3512714|PMID:15345707) MGI PMID:15345707 MGI:3512714 NCBI chrNW_004936521:6,975,844...7,009,460 JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within ISO (MGI:86446|PMID:8996814) MGI PMID:8996814 MGI:86446 NCBI chrNW_004936471:21,402,056...21,567,908 JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (MGI:5565016|PMID:24491816)
(MGI:5300220|PMID:21937600)
MGI PMID:21937600 PMID:24491816 MGI:5300220 MGI:5565016 NCBI chrNW_004936983:156,466...197,281 JBrowse link
G Slc25a46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (MGI:5921109|PMID:28934388) MGI PMID:28934388 MGI:5921109 NCBI chrNW_004936531:5,177,750...5,201,362 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (MGI:6152587|PMID:29615573) MGI PMID:29615573 MGI:6152587 NCBI chrNW_004936469:13,365,168...13,454,340 JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 acts_upstream_of_or_within ISO (MGI:6269036|PMID:30420556) MGI PMID:30420556 MGI:6269036 NCBI chrNW_004936718:869,901...884,708 JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:5569596|PMID:23258346) MGI PMID:23258346 MGI:5569596 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within ISO (MGI:5569596|PMID:23258346) MGI PMID:23258346 MGI:5569596 NCBI chrNW_004936594:5,527,788...5,530,694 JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO (PMID:12050665) UniProt PMID:12050665 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within ISO (MGI:3574146|PMID:15028753) MGI PMID:15028753 MGI:3574146 NCBI chrNW_004936509:2,248,181...2,250,991 JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO (MGI:3574146|PMID:15028753) MGI PMID:15028753 MGI:3574146 NCBI chrNW_004936509:2,262,873...2,265,391 JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (MGI:3834782|PMID:18786356)
(MGI:3574146|PMID:15028753)
MGI PMID:15028753 PMID:18786356 MGI:3574146 MGI:3834782 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within ISO (MGI:3775335|PMID:17678855) MGI PMID:17678855 MGI:3775335 NCBI chrNW_004936509:2,248,181...2,250,991 JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO (MGI:3775335|PMID:17678855) MGI PMID:17678855 MGI:3775335 NCBI chrNW_004936509:2,262,873...2,265,391 JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (MGI:3709215|PMID:17460091) MGI PMID:17460091 MGI:3709215 NCBI chrNW_004936836:295,090...306,756 JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (MGI:2155629|PMID:11714688) MGI PMID:11714688 MGI:2155629 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO (MGI:3709536|PMID:17409246) MGI PMID:17409246 MGI:3709536 NCBI chrNW_004936609:790,647...795,187 JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (MGI:3709536|PMID:17409246) MGI PMID:17409246 MGI:3709536 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (MGI:5140686|PMID:21338885) MGI PMID:21338885 MGI:5140686 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO (MGI:3702257|PMID:17376969) MGI PMID:17376969 MGI:3702257 NCBI chrNW_004936487:10,591,532...10,616,017 JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in ISO (MGI:5823288|PMID:27719760) MGI PMID:27719760 MGI:5823288 NCBI chrNW_004939661:2,128...6,384 JBrowse link
G Celf1 CUGBP Elav-like family member 1 acts_upstream_of_or_within ISO (MGI:6405956|PMID:32245946) MGI PMID:32245946 MGI:6405956 NCBI chrNW_004936562:1,699,774...1,785,285 JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 involved_in ISO (MGI:5532595|PMID:23948251) UniProt PMID:23948251 MGI:5532595 NCBI chrNW_004936623:988,423...1,046,969 JBrowse link
G CUNH21orf91 chromosome unknown C21orf91 homolog involved_in ISO (MGI:5908509|PMID:27404227) UniProt PMID:27404227 MGI:5908509 NCBI chrNW_004936505:10,190,248...10,219,502 JBrowse link
G Elavl4 ELAV like RNA binding protein 4 acts_upstream_of_or_within ISO (MGI:6405956|PMID:32245946) MGI PMID:32245946 MGI:6405956 NCBI chrNW_004936522:10,349,684...10,435,963 JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (MGI:5468205|PMID:23178126) MGI PMID:23178126 MGI:5468205 NCBI chrNW_004936491:16,745,310...16,762,422 JBrowse link
G Eomes eomesodermin involved_in ISO (MGI:3831469|PMID:18940588) UniProt PMID:18940588 MGI:3831469 NCBI chrNW_004936473:18,825,969...18,833,179 JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (MGI:5140686|PMID:21338885) MGI PMID:21338885 MGI:5140686 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO (MGI:5437785|PMID:22951639) MGI PMID:22951639 MGI:5437785 NCBI chrNW_004936498:4,225,855...4,288,082 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (MGI:3622601|PMID:11297820) MGI PMID:11297820 MGI:3622601 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO (MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:3794908 NCBI chrNW_004936487:10,591,532...10,616,017 JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:3794908 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (MGI:3588942|PMID:15950290), (MGI:3607388|PMID:12902391) MGI PMID:12902391 PMID:15950290 MGI:3588942 MGI:3607388 NCBI chrNW_004936564:4,432,556...4,453,056 JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO RGD PMID:16144905 RGD:1601501 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO (MGI:1096198|PMID:9288097) MGI PMID:9288097 MGI:1096198 NCBI chrNW_004936709:587,296...606,085 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:6152283|PMID:27399968) UniProt PMID:27399968 MGI:6152283 NCBI chrNW_004936471:34,206,084...34,260,538 JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:5632052|PMID:25527292) UniProt PMID:25527292 MGI:5632052 NCBI chrNW_004936496:13,847,210...14,146,110 JBrowse link
G Znf335 zinc finger protein 335 acts_upstream_of_or_within ISO (MGI:5468205|PMID:23178126) MGI PMID:23178126 MGI:5468205 NCBI chrNW_004936514:7,070,030...7,090,466 JBrowse link
chemoattraction of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:26598525 RGD:11097297 NCBI chrNW_004936646:1,326,900...1,407,236 JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:26598525 RGD:11097297 NCBI chrNW_004936469:10,245,001...10,438,933 JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within ISO (MGI:3834283|PMID:18466743) MGI PMID:18466743 MGI:3834283 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
chemoattraction of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt7b Wnt family member 7B involved_in ISO (MGI:4866939|PMID:21106844) ParkinsonsUK-UCL PMID:21106844 MGI:4866939 NCBI chrNW_004936629:3,869,976...3,907,932 JBrowse link
chemoattraction of serotonergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4866939|PMID:21106844) ParkinsonsUK-UCL PMID:21106844 MGI:4866939 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chrNW_004936622:191,165...756,552 JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:15207848) UniProt PMID:15207848 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:15207848) UniProt PMID:15207848 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
chemorepulsion of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntn1 netrin 1 involved_in ISO (MGI:5906064|PMID:28483977) UniProt PMID:28483977 MGI:5906064 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within ISO (MGI:3834283|PMID:18466743) MGI PMID:18466743 MGI:3834283 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
G Unc5c unc-5 netrin receptor C involved_in ISO (MGI:5906064|PMID:28483977) UniProt PMID:28483977 MGI:5906064 NCBI chrNW_004936687:2,600,635...2,951,407 JBrowse link
chemorepulsion of branchiomotor axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:3578029 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
chemorepulsion of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ryk receptor like tyrosine kinase involved_in ISO (MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:23517308 MGI:5707582 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4866939|PMID:21106844), (MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:21106844 PMID:23517308 MGI:4866939 MGI:5707582 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
clustering of voltage-gated calcium channels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in ISO (MGI:6378147|PMID:27693258) CACAO PMID:27693258 MGI:6378147 NCBI chrNW_004936495:8,173,521...8,179,249 JBrowse link
clustering of voltage-gated potassium channels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in ISO (MGI:6378147|PMID:27693258) CACAO PMID:27693258 MGI:6378147 NCBI chrNW_004936495:8,173,521...8,179,249 JBrowse link
G Cntn2 contactin 2 involved_in ISO (MGI:2675531|PMID:12963709) BHF-UCL PMID:12963709 MGI:2675531 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:2675531|PMID:12963709)
(MGI:6392103|PMID:29300891)
BHF-UCL
MGI
PMID:12963709 PMID:29300891 MGI:2675531 MGI:6392103 NCBI chrNW_004936527:2,859,442...4,748,885 JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (MGI:3848609|PMID:18509034) MGI PMID:18509034 MGI:3848609 NCBI chrNW_004936498:11,549,526...13,519,638 JBrowse link
G Kcnip2 potassium voltage-gated channel interacting protein 2 involved_in ISO (PMID:11287421) RGD
UniProt
PMID:11287421 PMID:12006572 PMID:12967630 RGD:625553 RGD:7207200 NCBI chrNW_004936600:3,940,806...3,974,455 JBrowse link
clustering of voltage-gated sodium channels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 ISO RGD PMID:17709431 RGD:14392774 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Gldn gliomedin acts_upstream_of_or_within ISO (MGI:4839704|PMID:20188654) MGI PMID:20188654 MGI:4839704 NCBI chrNW_004936471:13,234,478...13,294,306 JBrowse link
G Myoc myocilin involved_in ISO (MGI:5527213|PMID:23897819) UniProt PMID:23897819 MGI:5527213 NCBI chrNW_004936481:15,544,733...15,556,813 JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within ISO (MGI:4839704|PMID:20188654) MGI PMID:20188654 MGI:4839704 NCBI chrNW_004936557:7,345,813...7,437,654 JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in
acts_upstream_of_or_within
ISO (PMID:14602817)
(MGI:4839704|PMID:20188654)
UniProt
MGI
PMID:14602817 PMID:20188654 MGI:4839704 NCBI chrNW_004936653:1,167,055...1,238,241 JBrowse link
G Sclt1 sodium channel and clathrin linker 1 ISO RGD PMID:15797711 RGD:1359053 NCBI chrNW_004936642:1,984,936...2,146,707 JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within
ISO (MGI:2181223|PMID:11807096)
(MGI:3708238|PMID:17197442)
BHF-UCL
MGI
PMID:11807096 PMID:17197442 MGI:2181223 MGI:3708238 NCBI chrNW_004936661:2,831,132...2,903,619 JBrowse link
collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:2175933|PMID:11864995) MGI PMID:11864995 MGI:2175933 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:3806438 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Efna5 ephrin A5 involved_in ISO (MGI:5426777|PMID:19036963) BHF-UCL PMID:19036963 MGI:5426777 NCBI chrNW_004936531:2,217,467...2,267,265 JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (MGI:5547631|PMID:24113571) MGI PMID:24113571 MGI:5547631 NCBI chrNW_004936721:757,500...778,416 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO (MGI:5629993|PMID:25741725) MGI PMID:25741725 MGI:5629993 NCBI chrNW_004936495:14,791,246...14,897,454 JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within ISO (MGI:5547631|PMID:24113571) MGI PMID:24113571 MGI:5547631 NCBI chrNW_004936478:11,419,334...11,528,954 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:5629993|PMID:25741725) MGI PMID:25741725 MGI:5629993 NCBI chrNW_004936469:32,240,730...32,372,413 JBrowse link
collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:3765263|PMID:17956734) BHF-UCL PMID:17956734 MGI:3765263 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G LOC101959175 amyloid beta precursor protein acts_upstream_of_or_within ISO (MGI:3577153|PMID:15689559) MGI PMID:15689559 MGI:3577153 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
commissural neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO (MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:5470500 NCBI chrNW_004936529:1,099,510...1,171,587 JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (MGI:81675|PMID:8689685) UniProt PMID:8689685 MGI:81675 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO (MGI:2682446|PMID:14671310) MGI PMID:14671310 MGI:2682446 NCBI chrNW_004936675:1,275,500...1,334,878 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO (MGI:5440338|PMID:22998873) ARUK-UCL PMID:22998873 MGI:5440338 NCBI chrNW_004936518:4,291,391...4,310,752 JBrowse link
G Ncam1 neural cell adhesion molecule 1 involved_in ISO (MGI:5440338|PMID:22998873) ARUK-UCL PMID:22998873 MGI:5440338 NCBI chrNW_004936612:1,262,557...1,556,281 JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chrNW_004936539:7,763,036...8,185,001 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5141569|PMID:21658587) BHF-UCL PMID:21658587 MGI:5141569 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Ptch1 patched 1 ISO RGD PMID:19946319 RGD:12879429 NCBI chrNW_004936626:4,241,993...4,301,919 JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within ISO (MGI:3834283|PMID:18466743) MGI PMID:18466743 MGI:3834283 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
G Ryk receptor like tyrosine kinase acts_upstream_of_or_within ISO (MGI:3625635|PMID:16723543) MGI PMID:16723543 MGI:3625635 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:19946319 RGD:12879429 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:19946319 RGD:12879429 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
NOT|involved_in
ISO (MGI:5141569|PMID:21658587) BHF-UCL PMID:21658587 MGI:5141569 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
commissural neuron differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:3832346|PMID:19150847) UniProt PMID:19150847 MGI:3832346 NCBI chrNW_004936474:561,822...571,817 JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:5439194|PMID:22991444) MGI PMID:22991444 MGI:5439194 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO (MGI:5464968|PMID:23144223) MGI PMID:23144223 MGI:5464968 NCBI chrNW_004936604:3,023,781...3,110,104 JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (MGI:5464968|PMID:23144223)
(MGI:5140686|PMID:21338885)
MGI PMID:21338885 PMID:23144223 MGI:5140686 MGI:5464968 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO (MGI:5439194|PMID:22991444) MGI PMID:22991444 MGI:5439194 NCBI chrNW_004936798:406,258...414,785 JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO (MGI:1928687|PMID:11124115) MGI PMID:11124115 MGI:1928687 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO (MGI:5464968|PMID:23144223) MGI PMID:23144223 MGI:5464968 NCBI chrNW_004936506:34,968...206,432 JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (MGI:5464968|PMID:23144223) MGI PMID:23144223 MGI:5464968 NCBI chrNW_004936469:17,481,049...17,489,535 JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G CUNH12orf57 chromosome unknown C12orf57 homolog involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) UniProt PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chrNW_004936709:884,741...886,617 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO (MGI:5629993|PMID:25741725) MGI PMID:25741725 MGI:5629993 NCBI chrNW_004936495:14,791,246...14,897,454 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (PMID:9063735) BHF-UCL PMID:9063735 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO (MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:5315201 NCBI chrNW_004936749:1,819,491...1,827,440 JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:23932106) UniProt PMID:23932106 NCBI chrNW_004936474:24,788,175...24,837,471 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within ISO (MGI:4848234|PMID:21055390) MGI PMID:21055390 MGI:4848234 NCBI chrNW_004936498:5,434,912...5,487,354 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:5629993|PMID:25741725) MGI PMID:25741725 MGI:5629993 NCBI chrNW_004936469:32,240,730...32,372,413 JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within ISO (MGI:3778100|PMID:18354028) MGI PMID:18354028 MGI:3778100 NCBI chrNW_004936570:1,187,916...1,195,423 JBrowse link
corticospinal neuron axon guidance through spinal cord term browser