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ONTOLOGY REPORT - ANNOTATIONS


Term:response to axon injury
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Accession:GO:0048678 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus.



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response to axon injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:19331524 RGD:2313010 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Apod apolipoprotein D involved_in IEP PMID:2120218 UniProt PMID:2120218 RGD:2311210 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Arf4 ADP-ribosylation factor 4 IEP RGD PMID:11295238 RGD:2316175 NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261
JBrowse link
G Arg1 arginase 1 IEP unilateral vestibular deafferentation RGD PMID:15735325 RGD:4143237 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arg2 arginase 2 IEP unilateral vestibular deafferentation RGD PMID:15735325 RGD:4143237 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Axl Axl receptor tyrosine kinase IEP RGD PMID:20187850 RGD:151665810 NCBI chr 1:81,265,656...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (MGI:3586962|PMID:16103918) RGD PMID:16103918 MGI:3586962 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP RGD PMID:22639046 RGD:14398458 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:17200138 RGD:2316482 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEP RGD PMID:16495484 RGD:1600854 NCBI chr20:28,114,387...28,152,046
Ensembl chr20:28,114,404...28,121,807
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEP RGD PMID:20187850 RGD:151665810 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Cst3 cystatin C IEP Optic nerve axotomy
Entorhinal deafferentation
Facial nerve axotomy
Hypophysectomy
RGD PMID:14745560 PMID:12044447 PMID:8738161 PMID:9147287 RGD:2306507, RGD:2306510, RGD:2306509, RGD:2306508 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
G Cyss cystatin S IEP Sympathectomy, parasympathectomy
Glossopharyngeal denervation
RGD PMID:12005263 PMID:7878088 RGD:2306751, RGD:2306752 NCBI chr 3:137,432,272...137,436,610
Ensembl chr 3:137,432,049...137,436,610
JBrowse link
G Dpysl3 dihydropyrimidinase-like 3 involved_in IEP
IEA
PMID:20800647
GO_REF:0000002
InterPro PMID:20800647 GO_REF:0000002, RGD:8554592 NCBI chr18:35,374,429...35,480,462
Ensembl chr18:35,377,181...35,480,157
JBrowse link
G Drd2 dopamine receptor D2 IEP RGD PMID:19500946 RGD:2311554 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Epo erythropoietin IEP RGD PMID:15470751 RGD:1601067 NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IDA RGD PMID:15800203 RGD:1582139 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO MGI:1857458 (MGI:3611962|PMID:16009496) RGD PMID:16009496 MGI:3611962 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:3611962|PMID:16009496) RGD PMID:16009496 MGI:3611962 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in IMP PMID:15485775 UniProt PMID:15485775 RGD:1579783 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:4460071|PMID:20424322) RGD PMID:20424322 MGI:4460071 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Gip gastric inhibitory polypeptide IEP RGD PMID:19170165 RGD:2312528 NCBI chr10:80,968,410...80,976,506
Ensembl chr10:80,968,352...80,976,503
JBrowse link
G Gipr gastric inhibitory polypeptide receptor IEP RGD PMID:19170165 RGD:2312528 NCBI chr 1:78,804,287...78,814,462
Ensembl chr 1:78,805,593...78,814,462
JBrowse link
G Gstm1 glutathione S-transferase mu 1 IEP RGD PMID:20298122 RGD:7771530 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 IEP RGD PMID:24355600 RGD:126908004 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:10790857 RGD:9831168 NCBI chr13:100,766,101...100,963,435
Ensembl chr13:100,766,113...100,963,435
JBrowse link
G Kdr kinase insert domain receptor IEP RGD PMID:20187850 RGD:151665810 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lgals1 galectin 1 IEP RGD PMID:18850073 RGD:2316527 NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:19908283 RGD:2316612 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IEP RGD PMID:17918263 RGD:2303707 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:17880387 RGD:2304007 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IMP protection from axon degeneration following transection or NGF deprivation RGD PMID:15737734 RGD:2293210 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Matn2 matrilin 2 acts_upstream_of_or_within ISO MGI:3050541 (MGI:3850905|PMID:19295126) RGD PMID:19295126 MGI:3850905 NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
JBrowse link
G Matn4 matrilin 4 acts_upstream_of_or_within ISO (MGI:3850905|PMID:19295126) RGD PMID:19295126 MGI:3850905 NCBI chr 3:153,120,605...153,135,628
Ensembl chr 3:153,120,632...153,135,865
JBrowse link
G Max MYC associated factor X IEP RGD PMID:14603520 RGD:2316820 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23220115 RGD:12738219 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Morn4 MORN repeat containing 4 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5908332|PMID:22496551)
UniProt
RGD
PMID:22496551 PMID:21873635 GO_REF:0000024 MGI:5908332, RGD:13792537 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IDA PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
G Musk muscle associated receptor tyrosine kinase IEP RGD PMID:9698449 RGD:2317114 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Naip6 NLR family, apoptosis inhibitory protein 6 IEP RGD PMID:12617963 RGD:1299309 NCBI chr 2:31,507,423...31,559,098
Ensembl chr 2:31,507,424...31,570,542
JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:15735325 RGD:4143237 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Nppc natriuretic peptide C involved_in ISO MGI:2388899 (MGI:6271658|PMID:29501420) RGD PMID:29501420 MGI:6271658 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IEP RGD PMID:21456016 RGD:5684341 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:17532148 RGD:2325627 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Nts neurotensin IEP RGD PMID:8866516 RGD:9743915 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in IMP PMID:12917686 ARUK-UCL PMID:12917686 RGD:13673840 NCBI chr12:33,844,609...33,862,265
Ensembl chr12:33,844,396...33,862,253
JBrowse link
G P2ry12 purinergic receptor P2Y12 involved_in IDA PMID:14603465 ARUK-UCL PMID:14603465 RGD:13673748 NCBI chr 2:143,481,468...143,523,340
Ensembl chr 2:143,481,430...143,523,361
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP RGD PMID:18585435 RGD:2308892 NCBI chr 2:4,395,543...4,442,434
Ensembl chr 2:4,395,543...4,442,434
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEP RGD PMID:7922556 RGD:10449483 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO
IEA
(PMID:32514138)
GO_REF:0000107
RGD
Ensembl
PMID:32514138 GO_REF:0000107 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Pros1 protein S IEP RGD PMID:20187850 RGD:151665810 NCBI chr11:230,597...311,288
Ensembl chr11:230,696...311,286
JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 IEP RGD PMID:11157073 RGD:1302222 NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984
JBrowse link
G Rangap1 RAN GTPase activating protein 1 IEP RGD PMID:18667152 RGD:9835000 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438
JBrowse link
G Reln reelin IEP RGD PMID:18625290 RGD:2317775 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in ISO
IEA
(PMID:25908823)
GO_REF:0000002
RGD
InterPro
PMID:25908823 GO_REF:0000002 NCBI chr10:63,369,456...63,393,016
Ensembl chr10:63,369,456...63,392,822
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15356205 RGD:1580344 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in
ISO MGI:2655190 (MGI:5508628|PMID:16858406), (MGI:6478087|PMID:22575539)
(MGI:6478088|PMID:23827345), (MGI:6501071|PMID:27040821)
RGD PMID:16858406 PMID:22575539 PMID:23827345 PMID:27040821 MGI:5508628 MGI:6478087 MGI:6478088 MGI:6501071 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857872 (MGI:80951|PMID:8673102)
UniProt
RGD
PMID:8673102 GO_REF:0000024 MGI:80951 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:2447406|MGI:2679331 (MGI:3653322|PMID:16677818) RGD PMID:16677818 MGI:3653322 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
G Thy1 Thy-1 cell surface antigen IEP RGD PMID:20187850 RGD:151665810 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6378367|PMID:31235932), (MGI:6448697|PMID:31902528)
(PMID:31235932), (PMID:32514138)
RGD PMID:31235932 PMID:31902528 PMID:32514138 MGI:6378367 MGI:6448697 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Tspo translocator protein IEP RGD PMID:15255978 RGD:2317154 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
G Txn1 thioredoxin 1 IEP RGD PMID:19833109 RGD:5133729 NCBI chr 5:72,712,334...72,724,564
Ensembl chr 5:72,711,933...72,724,629
JBrowse link
G Txn2 thioredoxin 2 IEP RGD PMID:18441302 RGD:2306158 NCBI chr 7:109,496,772...109,510,378
Ensembl chr 7:109,496,761...109,510,359
JBrowse link
G Txnrd1 thioredoxin reductase 1 IEP RGD PMID:19833109 RGD:5133729 NCBI chr 7:20,830,042...20,914,990
Ensembl chr 7:20,830,045...20,907,863
JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp involved_in ISO (MGI:5638298|PMID:25690660) RGD PMID:25690660 MGI:5638298 NCBI chr 1:85,672,931...85,676,856
Ensembl chr 1:85,672,994...85,676,848
JBrowse link
G Uck2 uridine-cytidine kinase 2 IEP RGD PMID:10581173 RGD:634248 NCBI chr13:79,380,807...79,438,352
Ensembl chr13:79,383,846...79,438,352
JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856026 (MGI:1101275|PMID:9396756)
Ensembl
RGD
PMID:9396756 GO_REF:0000107 MGI:1101275 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of ISO MGI:97380 (MGI:3604840|PMID:16142215) RGD PMID:16142215 MGI:3604840 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Tnr tenascin R acts_upstream_of
involved_in
ISO
IEA
MGI:2154583 (MGI:3652670|PMID:16870730)
GO_REF:0000107
RGD
Ensembl
PMID:16870730 GO_REF:0000107 MGI:3652670 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT|acts_upstream_of_or_within ISO MGI:88057 (MGI:70238|PMID:7798939) RGD PMID:7798939 MGI:70238 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoe apolipoprotein E NOT|acts_upstream_of_or_within ISO MGI:88049 (MGI:70238|PMID:7798939) RGD PMID:7798939 MGI:70238 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO (MGI:85682|PMID:9009190) RGD PMID:9009190 MGI:85682 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bex2 brain expressed X-linked 2 acts_upstream_of_or_within ISO (MGI:4845807|PMID:20731761) RGD PMID:20731761 MGI:4845807 NCBI chr  X:99,219,015...99,220,411
Ensembl chr  X:99,219,014...99,220,958
JBrowse link
G Chl1 cell adhesion molecule L1-like IEP
NAS
RGD PMID:14707551 PMID:14707551 RGD:1303346, RGD:1303346 NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 IEP RGD PMID:11069908 RGD:1298825 NCBI chr 8:110,220,653...110,234,750
Ensembl chr 8:110,220,653...110,234,758
JBrowse link
G Ctnna1 catenin alpha 1 IEP RGD PMID:12387456 RGD:632464 NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:16228655 RGD:11537480 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dhfr dihydrofolate reductase involved_in IMP PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (MGI:6391459|PMID:21935678) RGD PMID:21935678 MGI:6391459 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:4460071|PMID:20424322) RGD PMID:20424322 MGI:4460071 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Gap43 growth associated protein 43 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
JBrowse link
G Isl1 ISL LIM homeobox 1 IEP RGD PMID:10363827 RGD:2311122 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Jak2 Janus kinase 2 IMP RGD PMID:15716400 RGD:1641846 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jam3 junctional adhesion molecule 3 IEP RGD PMID:22950044 RGD:7488944 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2445420 (MGI:3772001|PMID:15233917) RGD PMID:15233917 MGI:3772001 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G LOC100912195 protein BEX1-like acts_upstream_of_or_within ISO (MGI:4845807|PMID:20731761) RGD PMID:20731761 MGI:4845807 NCBI chr 1:110,047,861...110,051,812 JBrowse link
G Mag myelin-associated glycoprotein acts_upstream_of_or_within ISO MGI:1328321 (MGI:4845807|PMID:20731761) RGD PMID:20731761 MGI:4845807 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IMP PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
G Nefh neurofilament heavy chain IDA RGD PMID:10646539 RGD:9698439 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:15206821 RGD:9698447 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
JBrowse link
G Nrep neuronal regeneration related protein involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15485502 PMID:21873635 RGD:1540387, RGD:13792537 NCBI chr18:25,017,069...25,046,564
Ensembl chr18:25,017,083...25,046,591
JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:16782282 RGD:1643108 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Vcan versican IEP RGD PMID:12526031 RGD:632591 NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
JBrowse link
negative regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGD1307443 similar to mKIAA0319 protein acts_upstream_of_or_within ISO MGI:4362922 (MGI:5904726|PMID:28334068)
(PMID:28334068)
RGD PMID:28334068 MGI:5904726 NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154583 (MGI:3652670|PMID:16870730)
Ensembl
RGD
PMID:16870730 GO_REF:0000107 MGI:3652670 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
negative regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers2 ceramide synthase 2 involved_in IMP PMID:22393241 BHF-UCL PMID:22393241 RGD:11041067 NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
JBrowse link
G Epha4 Eph receptor A4 involved_in
NOT
IMP
ISO
ISS
(MGI:3530975|PMID:15537875)
GO_REF:0000024
RGD
UniProt
PMID:15537875 PMID:17970742 PMID:17418490 GO_REF:0000024 MGI:3530975, RGD:5688750, RGD:5688782 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F involved_in ISO (MGI:5694525|PMID:26203138) RGD PMID:26203138 MGI:5694525 NCBI chr 1:183,190,480...183,270,276
Ensembl chr 1:183,190,480...183,270,276
JBrowse link
G Klk8 kallikrein related-peptidase 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3766680|PMID:17629414)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17629414 GO_REF:0000024 GO_REF:0000107 MGI:3766680 NCBI chr 1:94,251,803...94,258,646
Ensembl chr 1:94,251,803...94,258,646
JBrowse link
G Kremen1 kringle containing transmembrane protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6274963|PMID:24167472)
Ensembl
RGD
PMID:24167472 GO_REF:0000107 MGI:6274963 NCBI chr14:80,081,870...80,147,489
Ensembl chr14:80,084,403...80,147,516
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO (MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:5702499 NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO (MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:5702499 NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:5694525|PMID:26203138) RGD PMID:26203138 MGI:5694525 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in ISS
ISO
GO_REF:0000024
(MGI:4880863|PMID:19780196), (MGI:5461303|PMID:22406547)
UniProt
RGD
PMID:19780196 PMID:22406547 GO_REF:0000024 MGI:4880863 MGI:5461303 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a IMP RGD PMID:16585268 RGD:9850138 NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:5461303|PMID:22406547)
UniProt
RGD
PMID:22406547 GO_REF:0000024 MGI:5461303 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5461303|PMID:22406547)
UniProt
RGD
PMID:22406547 GO_REF:0000024 MGI:5461303 NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
JBrowse link
G Xylt1 xylosyltransferase 1 IMP RGD PMID:18765417 RGD:2313145 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783
JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 IEP RGD PMID:15625076 RGD:1581125 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
JBrowse link
negative regulation of formation of growth cone in injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtn4 reticulon 4 acts_upstream_of_or_within ISO MGI:3623522 (MGI:3621687|PMID:12718855) RGD PMID:12718855 MGI:3621687 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
negative regulation of Schwann cell proliferation involved in axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers2 ceramide synthase 2 involved_in IMP PMID:22393241 BHF-UCL PMID:22393241 RGD:11041067 NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
JBrowse link
peripheral nervous system axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 IEP RGD PMID:2120218 RGD:2311210 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa4 apolipoprotein A4 IEP RGD PMID:2120218 RGD:2311210 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apod apolipoprotein D IEP RGD PMID:2120218 RGD:2311210 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Apoe apolipoprotein E IEP RGD PMID:2120218 RGD:2311210 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Calu calumenin IEP sciatic nerve RGD PMID:15509515 RGD:2316214 NCBI chr 4:57,949,086...57,976,589
Ensembl chr 4:57,948,997...57,976,593
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEP RGD PMID:16495484 RGD:1600854 NCBI chr20:28,114,387...28,152,046
Ensembl chr20:28,114,404...28,121,807
JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:10924960 RGD:2304028 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
JBrowse link
G Mmp2 matrix metallopeptidase 2 IDA RGD PMID:15026117 RGD:1582605 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:15679872 RGD:2326091 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Nefl neurofilament light chain acts_upstream_of_or_within ISO MGI:2180095 (MGI:1100197|PMID:9398473) RGD PMID:9398473 MGI:1100197 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link
G Tnc tenascin C acts_upstream_of_or_within ISO MGI:2388370 (MGI:3611659|PMID:16262655) RGD PMID:16262655 MGI:3611659 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
JBrowse link
G Tspo translocator protein IEP RGD PMID:8977149 RGD:2317177 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
positive regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntf ciliary neurotrophic factor involved_in IDA PMID:16699509 CAFA PMID:16699509 RGD:12793002 NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
JBrowse link
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO MGI:97380 (MGI:3604840|PMID:16142215) RGD PMID:16142215 MGI:3604840 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Ocm oncomodulin involved_in IDA PMID:16699509 CAFA PMID:16699509 RGD:12793002 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
JBrowse link
positive regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:5582953|PMID:24733831) RGD PMID:24733831 MGI:5582953 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Cntf ciliary neurotrophic factor involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15574731 PMID:21873635 RGD:1626128, RGD:13792537 NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B IDA RGD PMID:9512405 RGD:7205517 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653
JBrowse link
G Flna filamin A involved_in ISO (MGI:6378072|PMID:26157139) RGD PMID:26157139 MGI:6378072 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Grn granulin precursor involved_in ISS
ISO
GO_REF:0000024
(MGI:5907533|PMID:28453791)
UniProt
RGD
PMID:28453791 GO_REF:0000024 MGI:5907533 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IMP RGD PMID:23349896 RGD:10046026 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Mif macrophage migration inhibitory factor IMP RGD PMID:12456989 RGD:1642004 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 IMP RGD PMID:18431495 RGD:2306515 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Nrg1 neuregulin 1 IDA RGD PMID:20957456 RGD:10449012 NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Ptn pleiotrophin involved_in IDA PMID:27671118 UniProt PMID:27671118 RGD:14397577 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Scarf1 scavenger receptor class F, member 1 involved_in ISO (MGI:3772611|PMID:18160648) RGD PMID:18160648 MGI:3772611 NCBI chr10:60,359,213...60,371,516
Ensembl chr10:60,359,197...60,371,516
JBrowse link
G Stk24 serine/threonine kinase 24 IMP RGD PMID:19855390 RGD:2317003 NCBI chr15:98,363,707...98,458,940
Ensembl chr15:98,365,791...98,460,553
JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within ISO MGI:3623522 (MGI:3621687|PMID:12718855) RGD PMID:12718855 MGI:3621687 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
positive regulation of optical nerve axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ocm oncomodulin involved_in IDA PMID:16699509 CAFA PMID:16699509 RGD:12793002 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
JBrowse link
regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 acts_upstream_of_or_within ISO MGI:2443718 (MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:5702499 NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:1346866|MGI:1346867 (MGI:5582953|PMID:24733831) RGD PMID:24733831 MGI:5582953 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO MGI:103038 (MGI:5547847|PMID:24129709) RGD PMID:24129709 MGI:5547847 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO MGI:1096335|MGI:1097159 (MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:5702499 NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346867|MGI:88190 (MGI:5582953|PMID:24733831)
Ensembl
RGD
PMID:24733831 GO_REF:0000107 MGI:5582953 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO MGI:1346866|MGI:88190 (MGI:5582953|PMID:24733831) RGD PMID:24733831 MGI:5582953 NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO MGI:2443718 (MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:5702499 NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO MGI:88190 (MGI:5582953|PMID:24733831) RGD PMID:24733831 MGI:5582953 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5294249|PMID:21976490)
Ensembl
RGD
PMID:21976490 GO_REF:0000107 MGI:5294249 NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
JBrowse link
G Stk24 serine/threonine kinase 24 involved_in ISO (PMID:19855390) RGD PMID:19855390 NCBI chr15:98,363,707...98,458,940
Ensembl chr15:98,365,791...98,460,553
JBrowse link
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Omg oligodendrocyte-myelin glycoprotein acts_upstream_of_or_within ISO MGI:3821628 (MGI:3820448|PMID:18692574) RGD PMID:18692574 MGI:3820448 NCBI chr10:64,461,350...64,464,084
Ensembl chr10:64,461,350...64,464,084
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20026
    response to stimulus 10573
      response to stress 4275
        response to wounding 672
          response to axon injury 133
            axon regeneration + 74
paths to the root