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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of collateral sprouting
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Accession:GO:0048670 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of collateral sprouting.



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regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO MGI:2443199 (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Fstl4 follistatin-like 4 acts_upstream_of_or_within ISO MGI:88145 (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:36,911,228...37,338,665
Ensembl chr10:36,911,420...37,338,588
JBrowse link
negative regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A involved_in ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Epha7 Eph receptor A7 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Fstl4 follistatin-like 4 acts_upstream_of_or_within ISO (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:36,911,228...37,338,665
Ensembl chr10:36,911,420...37,338,588
JBrowse link
G Ifrd1 interferon-related developmental regulator 1 acts_upstream_of_or_within ISO MGI:97321 (MGI:3771687|PMID:18052984) RGD PMID:18052984 MGI:3771687 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in ISS
ISO
GO_REF:0000024
(MGI:5431284|PMID:22519304)
UniProt
RGD
PMID:22519304 GO_REF:0000024 MGI:5431284 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a IMP RGD PMID:23744345 RGD:9850124 NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3706258|PMID:17389358)
PMID:21873635
RGD PMID:17389358 PMID:21873635 MGI:3706258, RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3706258|PMID:17389358)
PMID:21873635
RGD PMID:17389358 PMID:21873635 MGI:3706258, RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
negative regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spart spartin acts_upstream_of_or_within ISO MGI:1919205|MGI:5430946 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 IEP RGD PMID:15625076 RGD:1581125 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
JBrowse link
positive regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A involved_in ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(PMID:19036963)
GO_REF:0000107
(MGI:5566541|PMID:24573299)
PMID:21873635
RGD
Ensembl
PMID:19036963 PMID:24573299 PMID:21873635 GO_REF:0000107 MGI:5566541, RGD:13792537 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO (MGI:3771687|PMID:18052984) RGD PMID:18052984 MGI:3771687 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
JBrowse link
G Dcx doublecortin IMP RGD PMID:19726658 RGD:12904759 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Efna5 ephrin A5 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Ist1 IST1 factor associated with ESCRT-III acts_upstream_of_or_within ISO MGI:2139806 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
JBrowse link
G Lpar3 lysophosphatidic acid receptor 3 acts_upstream_of_or_within ISO (MGI:5490005|PMID:22465231) RGD PMID:22465231 MGI:5490005 NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
JBrowse link
G Ngf nerve growth factor involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3771687|PMID:18052984)
RGD PMID:18052984 PMID:21873635 MGI:3771687, RGD:13792537 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Rnd2 Rho family GTPase 2 acts_upstream_of_or_within ISO (MGI:5490005|PMID:22465231) RGD PMID:22465231 MGI:5490005 NCBI chr10:86,399,177...86,402,750
Ensembl chr10:86,399,148...86,402,742
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (PMID:19788569) RGD PMID:19788569 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
JBrowse link
positive regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within ISO MGI:3623522 (MGI:3621687|PMID:12718855) RGD PMID:12718855 MGI:3621687 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Omg oligodendrocyte-myelin glycoprotein acts_upstream_of_or_within ISO MGI:3821628 (MGI:3820448|PMID:18692574) RGD PMID:18692574 MGI:3820448 NCBI chr10:64,461,350...64,464,084
Ensembl chr10:64,461,350...64,464,084
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      developmental growth 840
        regulation of developmental growth 403
          regulation of collateral sprouting 25
            negative regulation of collateral sprouting + 11
            positive regulation of collateral sprouting + 14
            regulation of collateral sprouting in absence of injury + 3
            regulation of collateral sprouting of injured axon + 2
            regulation of collateral sprouting of intact axon in response to injury + 2
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        multicellular organism development 5773
          system development 5413
            nervous system development 2747
              neurogenesis 1968
                generation of neurons 1806
                  neuron differentiation 1633
                    neuron development 1340
                      neuron projection development 1173
                        neuron projection morphogenesis 724
                          axonogenesis 497
                            collateral sprouting 33
                              regulation of collateral sprouting 25
                                negative regulation of collateral sprouting + 11
                                positive regulation of collateral sprouting + 14
                                regulation of collateral sprouting in absence of injury + 3
                                regulation of collateral sprouting of injured axon + 2
                                regulation of collateral sprouting of intact axon in response to injury + 2
paths to the root