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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of collateral sprouting
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Accession:GO:0048670 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of collateral sprouting.


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regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO MGI:2443199 (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Fstl4 follistatin-like 4 acts_upstream_of_or_within ISO MGI:88145 (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588 		JBrowse link
negative regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A involved_in ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Epha7 Eph receptor A7 involved_in ISO
IEA		 (MGI:5426777|PMID:19036963)
GO_REF:0000107		 RGD
Ensembl		 PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5431268|PMID:22726441)		 UniProt
RGD		 PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391 		JBrowse link
G Fstl4 follistatin-like 4 acts_upstream_of_or_within ISO (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588 		JBrowse link
G Ifrd1 interferon-related developmental regulator 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:97321 (MGI:3771687|PMID:18052984)
GO_REF:0000107		 RGD
Ensembl		 PMID:18052984 GO_REF:0000107 MGI:3771687 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5431284|PMID:22519304)		 UniProt
Ensembl
RGD		 PMID:22519304 GO_REF:0000024 GO_REF:0000107 MGI:5431284 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a IMP RGD PMID:23744345 RGD:9850124 NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3706258|PMID:17389358)
PMID:21873635		 RGD PMID:17389358 PMID:21873635 MGI:3706258, RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3706258|PMID:17389358)
PMID:21873635		 RGD PMID:17389358 PMID:21873635 MGI:3706258, RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407 		JBrowse link
negative regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spart spartin acts_upstream_of_or_within ISO MGI:1919205|MGI:5430946 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248 		JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 IEP RGD PMID:15625076 RGD:1581125 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162 		JBrowse link
positive regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A involved_in ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:19036963)
PMID:21873635
(MGI:5566541|PMID:24573299)
GO_REF:0000107		 RGD
Ensembl		 PMID:19036963 PMID:24573299 PMID:21873635 GO_REF:0000107 MGI:5566541, RGD:13792537 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3771687|PMID:18052984)
GO_REF:0000107		 RGD
Ensembl		 PMID:18052984 GO_REF:0000107 MGI:3771687 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Dcx doublecortin IMP RGD PMID:19726658 RGD:12904759 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Efna5 ephrin A5 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413 		JBrowse link
G Ist1 IST1 factor associated with ESCRT-III acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2139806 (MGI:5430704|PMID:22619377)
GO_REF:0000107		 RGD
Ensembl		 PMID:22619377 GO_REF:0000107 MGI:5430704 NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956 		JBrowse link
G Lpar3 lysophosphatidic acid receptor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5490005|PMID:22465231)
GO_REF:0000107		 RGD
Ensembl		 PMID:22465231 GO_REF:0000107 MGI:5490005 NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357 		JBrowse link
G Ngf nerve growth factor involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:3771687|PMID:18052984)		 RGD PMID:18052984 PMID:21873635 MGI:3771687, RGD:13792537 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Rnd2 Rho family GTPase 2 acts_upstream_of_or_within ISO (MGI:5490005|PMID:22465231) RGD PMID:22465231 MGI:5490005 NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742 		JBrowse link
G Sema4d semaphorin 4D involved_in ISO (PMID:19788569) RGD PMID:19788569 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138 		JBrowse link
positive regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within ISO MGI:3623522 (MGI:3621687|PMID:12718855) RGD PMID:12718855 MGI:3621687 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686 		JBrowse link
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Omg oligodendrocyte-myelin glycoprotein acts_upstream_of_or_within ISO MGI:3821628 (MGI:3820448|PMID:18692574) RGD PMID:18692574 MGI:3820448 NCBI chr10:64,461,350...64,464,084
Ensembl chr10:64,461,350...64,464,084 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19527
    regulation of biological process 12837
      regulation of growth 701
        regulation of developmental growth 415
          regulation of collateral sprouting 25
            negative regulation of collateral sprouting + 11
            positive regulation of collateral sprouting + 14
            regulation of collateral sprouting in absence of injury + 3
            regulation of collateral sprouting of injured axon + 2
            regulation of collateral sprouting of intact axon in response to injury + 2
Path 2
Term Annotations click to browse term
  biological_process 19527
    developmental process 6898
      anatomical structure development 6425
        multicellular organism development 5175
          system development 4453
            nervous system development 2730
              neurogenesis 2039
                generation of neurons 1759
                  neuron differentiation 1677
                    neuron development 1381
                      neuron projection development 1208
                        axon development 581
                          axonogenesis 508
                            collateral sprouting 35
                              regulation of collateral sprouting 25
                                negative regulation of collateral sprouting + 11
                                positive regulation of collateral sprouting + 14
                                regulation of collateral sprouting in absence of injury + 3
                                regulation of collateral sprouting of injured axon + 2
                                regulation of collateral sprouting of intact axon in response to injury + 2
paths to the root