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ONTOLOGY REPORT - ANNOTATIONS

Term:collateral sprouting
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Accession:GO:0048668 term browser browse the term
Definition:The process in which outgrowths develop from the shafts of existing axons.
Synonyms:broad_synonym: axon branching


show annotations for term's descendants           Sort by:
collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27076424) Ensembl
MGI		 PMID:27076424 GO_REF:0000107 NCBI chr 6:47,065,284...47,210,746
Ensembl chr 6:48,328,863...48,474,163 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008 		JBrowse link
G EFNA5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:102,732,268...103,026,746
Ensembl chr 5:108,548,927...108,598,942 		JBrowse link
G HDAC6 histone deacetylase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24113571) Ensembl
MGI		 PMID:24113571 GO_REF:0000107 NCBI chr  X:41,099,539...41,122,650
Ensembl chr  X:48,960,430...48,982,642 		JBrowse link
G IST1 IST1 factor associated with ESCRT-III involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22619377) Ensembl
MGI		 PMID:22619377 GO_REF:0000107 NCBI chr16:53,082,530...53,115,965
Ensembl chr16:71,733,302...71,765,969 		JBrowse link
G LPAR3 lysophosphatidic acid receptor 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22465231) Ensembl
MGI		 PMID:22465231 GO_REF:0000107 NCBI chr 1:117,359,661...117,441,297
Ensembl chr 1:86,222,008...86,274,228 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30272140) MGI PMID:30272140 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NIN ninein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25741725) Ensembl
MGI		 PMID:25741725 GO_REF:0000107 NCBI chr14:31,308,388...31,420,045
Ensembl chr14:49,609,368...49,719,971 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,642,534...35,660,210
Ensembl chr 9:36,445,576...36,462,637 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 involved_in ISO (PMID:17954614) MGI PMID:17954614 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G RND2 Rho family GTPase 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22465231) Ensembl
MGI		 PMID:22465231 GO_REF:0000107 NCBI chr17:14,276,880...14,298,023
Ensembl chr17:14,521,510...14,528,209 		JBrowse link
G SEPTIN7 septin-7 acts_upstream_of_or_within ISO (PMID:24113571) MGI PMID:24113571 NCBI chr 7:36,427,252...36,531,668
Ensembl chr 7:36,662,430...36,766,632 		JBrowse link
G SPG21 SPG21 abhydrolase domain containing, maspardin acts_upstream_of_or_within ISO (PMID:20661613), (PMID:26978163) MGI PMID:20661613 PMID:26978163 NCBI chr15:43,902,865...43,929,663
Ensembl chr15:62,187,767...62,213,741 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of ISO (PMID:17389358) MGI PMID:17389358 NCBI chr12:129,549,399...129,579,087 JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 acts_upstream_of ISO (PMID:17389358) MGI PMID:17389358 NCBI chr17:31,262,168...31,362,251
Ensembl chr17:36,409,312...36,507,786 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:25741725) MGI PMID:25741725 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15689559) Ensembl
MGI		 PMID:15689559 GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G COBL cordon-bleu WH2 repeat protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:51,652,318...51,952,256
Ensembl chr 7:51,895,807...52,097,841 		JBrowse link
G SPART spartin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22619377) Ensembl
MGI		 PMID:22619377 GO_REF:0000107 NCBI chr13:17,514,720...17,582,011
Ensembl chr13:35,945,938...35,989,774 		JBrowse link
negative regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11A BCL11 transcription factor A involved_in ISO (PMID:19616629) BHF-UCL PMID:19616629 NCBI chr2A:60,552,908...60,655,437
Ensembl chr2A:61,695,613...61,795,800 		JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,143,240...91,322,040
Ensembl chr 6:94,392,353...94,566,716 		JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (MGI:5431268|PMID:22726441) UniProt PMID:22726441 MGI:5431268 NCBI chr  X:127,764,648...128,353,928
Ensembl chr  X:138,023,016...138,103,217 		JBrowse link
G FSTL4 follistatin like 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24573299) Ensembl
MGI		 PMID:24573299 GO_REF:0000107 NCBI chr 5:128,606,171...129,016,734
Ensembl chr 5:134,766,944...135,163,711 		JBrowse link
G IFRD1 interferon related developmental regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18052984) Ensembl
MGI		 PMID:18052984 GO_REF:0000107 NCBI chr 7:104,412,763...104,438,490
Ensembl chr 7:117,115,187...117,141,887 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a ISO RGD PMID:23744345 RGD:9850124 NCBI chr15:71,728,669...71,774,447
Ensembl chr15:90,922,199...90,956,179 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17389358) TreeGrafter
MGI		 PMID:17389358 GO_REF:0000118 NCBI chr12:129,549,399...129,579,087 JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17389358) TreeGrafter
MGI		 PMID:17389358 GO_REF:0000118 NCBI chr17:31,262,168...31,362,251
Ensembl chr17:36,409,312...36,507,786 		JBrowse link
negative regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPART spartin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22619377) Ensembl
MGI		 PMID:22619377 GO_REF:0000107 NCBI chr13:17,514,720...17,582,011
Ensembl chr13:35,945,938...35,989,774 		JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:15625076 RGD:1581125 NCBI chr 4:80,263,711...80,271,466
Ensembl chr 4:90,988,200...90,995,935 		JBrowse link
positive regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11A BCL11 transcription factor A involved_in ISO (PMID:19616629) BHF-UCL PMID:19616629 NCBI chr2A:60,552,908...60,655,437
Ensembl chr2A:61,695,613...61,795,800 		JBrowse link
G BDNF brain derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24573299) TreeGrafter
MGI		 PMID:24573299 GO_REF:0000118 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18052984) Ensembl
MGI		 PMID:18052984 GO_REF:0000107 NCBI chr 1:132,043,097...132,049,366
Ensembl chr 1:135,864,807...135,870,145 		JBrowse link
G DCX doublecortin ISO RGD PMID:19726658 RGD:12904759 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G EFNA5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:102,732,268...103,026,746
Ensembl chr 5:108,548,927...108,598,942 		JBrowse link
G IST1 IST1 factor associated with ESCRT-III involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22619377) Ensembl
MGI		 PMID:22619377 GO_REF:0000107 NCBI chr16:53,082,530...53,115,965
Ensembl chr16:71,733,302...71,765,969 		JBrowse link
G LPAR3 lysophosphatidic acid receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22465231) Ensembl
MGI		 PMID:22465231 GO_REF:0000107 NCBI chr 1:117,359,661...117,441,297
Ensembl chr 1:86,222,008...86,274,228 		JBrowse link
G NGF nerve growth factor acts_upstream_of_or_within ISO (PMID:18052984) MGI PMID:18052984 NCBI chr 1:87,223,597...87,276,759 JBrowse link
G RND2 Rho family GTPase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22465231) Ensembl
MGI		 PMID:22465231 GO_REF:0000107 NCBI chr17:14,276,880...14,298,023
Ensembl chr17:14,521,510...14,528,209 		JBrowse link
G SEMA4D semaphorin 4D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,451,420...60,588,519
Ensembl chr 9:88,497,528...88,560,811 		JBrowse link
positive regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,685,160...10,741,402
Ensembl chr17:10,862,310...10,918,865 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP1 LDL receptor related protein 1 ISO RGD PMID:23867460 RGD:13800520 NCBI chr12:31,713,938...31,799,287
Ensembl chr12:31,966,149...32,051,979 		JBrowse link
regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:24573299) MGI PMID:24573299 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239 		JBrowse link
G FSTL4 follistatin like 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24573299) Ensembl
MGI		 PMID:24573299 GO_REF:0000107 NCBI chr 5:128,606,171...129,016,734
Ensembl chr 5:134,766,944...135,163,711 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    cellular process 15499
      cell growth 526
        developmental cell growth 284
          collateral sprouting 35
            collateral sprouting in absence of injury + 5
            collateral sprouting of injured axon + 1
            collateral sprouting of intact axon in response to injury + 1
            negative regulation of collateral sprouting + 11
            positive regulation of collateral sprouting + 13
            regulation of collateral sprouting + 23
Path 2
Term Annotations click to browse term
  biological_process 16440
    developmental process 6563
      anatomical structure development 6172
        multicellular organism development 4975
          system development 4324
            nervous system development 2702
              neurogenesis 2004
                generation of neurons 1729
                  neuron differentiation 1646
                    neuron development 1359
                      neuron projection development 1189
                        neuron projection morphogenesis 728
                          axonogenesis 503
                            collateral sprouting 35
                              collateral sprouting in absence of injury + 5
                              collateral sprouting of injured axon + 1
                              collateral sprouting of intact axon in response to injury + 1
                              negative regulation of collateral sprouting + 11
                              positive regulation of collateral sprouting + 13
                              regulation of collateral sprouting + 23
paths to the root