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ONTOLOGY REPORT - ANNOTATIONS


Term:collateral sprouting
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Accession:GO:0048668 term browser browse the term
Definition:The process in which outgrowths develop from the shafts of existing axons.
Synonyms:broad_synonym: axon branching


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collateral sprouting term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:2175933|PMID:11864995) RGD PMID:11864995 MGI:2175933 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Bdnf brain-derived neurotrophic factor ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Efna5 ephrin A5 IEA
ISO
GO_REF:0000107
(MGI:5426777|PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Hdac6 histone deacetylase 6 ISO (MGI:5547631|PMID:24113571) RGD PMID:24113571 MGI:5547631 NCBI chr  X:15,295,372...15,316,673
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Nin ninein ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:92,423,412...92,527,776
Ensembl chr 6:92,433,381...92,527,711
JBrowse link
G Septin7 septin 7 ISO (MGI:5547631|PMID:24113571) RGD PMID:24113571 MGI:5547631 NCBI chr 8:26,412,910...26,476,615
Ensembl chr 8:26,413,233...26,476,611
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
collateral sprouting in absence of injury term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISS
ISO
GO_REF:0000024
MGI:88047 (MGI:3577153|PMID:15689559)
UniProt
RGD
PMID:15689559 GO_REF:0000024 MGI:3577153 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Cobl cordon-bleu WH2 repeat protein IEA
ISO
GO_REF:0000107
(MGI:3765263|PMID:17956734)
Ensembl
RGD
PMID:17956734 GO_REF:0000107 MGI:3765263 NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936
JBrowse link
negative regulation of collateral sprouting term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:108,826,717...108,921,197
Ensembl chr14:108,826,831...108,921,669
JBrowse link
G Epha7 Eph receptor A7 ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Fgf13 fibroblast growth factor 13 ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Fstl4 follistatin-like 4 ISO (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:38,104,344...38,532,216
Ensembl chr10:38,104,558...38,532,196
JBrowse link
G Ifrd1 interferon-related developmental regulator 1 IEA
ISO
GO_REF:0000107
MGI:97321 (MGI:3771687|PMID:18052984)
Ensembl
RGD
PMID:18052984 GO_REF:0000107 MGI:3771687 NCBI chr 6:60,132,025...60,151,354
Ensembl chr 6:60,132,024...60,151,420
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S IEA
ISO
ISS
GO_REF:0000107
(MGI:5431284|PMID:22519304)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22519304 GO_REF:0000024 GO_REF:0000107 MGI:5431284 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a IMP RGD PMID:23744345 RGD:9850124 NCBI chr 1:134,699,053...134,742,512
Ensembl chr 1:134,699,299...134,742,514
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:3706258|PMID:17389358) RGD PMID:17389358 MGI:3706258 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO (MGI:3706258|PMID:17389358) RGD PMID:17389358 MGI:3706258 NCBI chr10:48,050,079...48,129,377
Ensembl chr10:48,050,803...48,129,377
JBrowse link
negative regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spart spartin ISO MGI:1919205|MGI:5430946 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr 2:144,522,382...144,548,968
Ensembl chr 2:144,522,072...144,548,917
JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 IEP RGD PMID:15625076 RGD:1581125 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
positive regulation of collateral sprouting term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:108,826,717...108,921,197
Ensembl chr14:108,826,831...108,921,669
JBrowse link
G Bdnf brain-derived neurotrophic factor ISO
IBA
IEA
(PMID:19036963)
PMID:21873635
(MGI:5566541|PMID:24573299)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 PMID:24573299, PMID:21873635 GO_REF:0000107 MGI:5566541, RGD:13792537 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO (MGI:3771687|PMID:18052984) RGD PMID:18052984 MGI:3771687 NCBI chr 2:187,322,416...187,326,794
Ensembl chr 2:184,882,969...184,883,505
JBrowse link
G Dcx doublecortin IMP RGD PMID:19726658 RGD:12904759 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Efna5 ephrin A5 IEA
ISO
GO_REF:0000107
(MGI:5426777|PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Ist1 IST1 factor associated with ESCRT-III ISO MGI:5430946 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr19:41,968,692...41,990,843
Ensembl chr19:41,968,705...41,990,843
JBrowse link
G Lpar3 lysophosphatidic acid receptor 3 ISO (MGI:5490005|PMID:22465231) RGD PMID:22465231 MGI:5490005 NCBI chr 2:252,090,634...252,159,221
Ensembl chr 2:252,090,669...252,159,903
JBrowse link
G Ngf nerve growth factor ISO
IBA
(MGI:3771687|PMID:18052984)
PMID:21873635
RGD PMID:18052984, PMID:21873635 MGI:3771687, RGD:13792537 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Rnd2 Rho family GTPase 2 ISO (MGI:5490005|PMID:22465231) RGD PMID:22465231 MGI:5490005 NCBI chr10:89,376,530...89,380,101
Ensembl chr10:89,376,530...89,380,101
JBrowse link
G Sema4d semaphorin 4D ISO (PMID:19788569) RGD PMID:19788569 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
positive regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3 Wnt family member 3 ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Rtn4 reticulon 4 ISO MGI:3623522 (MGI:3621687|PMID:12718855) RGD PMID:12718855 MGI:3621687 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
regulation of collateral sprouting term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor ISO MGI:2443199 (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Fstl4 follistatin-like 4 ISO MGI:88145 (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:38,104,344...38,532,216
Ensembl chr10:38,104,558...38,532,196
JBrowse link
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Omg oligodendrocyte-myelin glycoprotein ISO MGI:3821628 (MGI:3820448|PMID:18692574) RGD PMID:18692574 MGI:3820448 NCBI chr10:66,845,654...66,848,388
Ensembl chr10:66,845,654...66,848,388
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    growth 1094
      developmental growth 819
        developmental cell growth 279
          collateral sprouting 33
            collateral sprouting in absence of injury + 5
            collateral sprouting of injured axon + 2
            collateral sprouting of intact axon in response to injury + 2
            negative regulation of collateral sprouting + 11
            positive regulation of collateral sprouting + 14
            regulation of collateral sprouting + 25
Path 2
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      anatomical structure development 6270
        multicellular organism development 5744
          system development 5280
            nervous system development 2720
              neurogenesis 1936
                generation of neurons 1780
                  neuron differentiation 1614
                    neuron development 1323
                      neuron projection development 1164
                        axon development 549
                          axonogenesis 496
                            collateral sprouting 33
                              collateral sprouting in absence of injury + 5
                              collateral sprouting of injured axon + 2
                              collateral sprouting of intact axon in response to injury + 2
                              negative regulation of collateral sprouting + 11
                              positive regulation of collateral sprouting + 14
                              regulation of collateral sprouting + 25
paths to the root