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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron fate commitment
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Accession:GO:0048663 term browser browse the term
Definition:The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.
Synonyms:exact_synonym: neuron lineage restriction;   neuronal lineage restriction
 alt_id: GO:0042055


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neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISS UniProtKB GO_REF:0000024 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G EPOP elongin BC and polycomb repressive complex 2 associated protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:38,671,703...38,674,957
Ensembl chr17:38,671,703...38,674,957
JBrowse link
G FOXN4 forkhead box N4 ISO (MGI:3587461|PMID:16020526) MGI PMID:16020526 MGI:3587461 NCBI chr12:109,277,978...109,309,406
Ensembl chr12:109,277,978...109,309,284
JBrowse link
G GATA2 GATA binding protein 2 ISO (MGI:3827070|PMID:19088086) MGI PMID:19088086 MGI:3827070 NCBI chr 3:128,479,422...128,493,201
Ensembl chr 3:128,479,427...128,493,201
Ensembl chr 3:128,479,427...128,493,201
JBrowse link
G GBX1 gastrulation brain homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:151,148,589...151,167,548
Ensembl chr 7:151,148,589...151,174,745
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:3610448|PMID:16168404) MGI PMID:16168404 MGI:3610448 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,237,870
JBrowse link
G GSX1 GS homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr13:27,792,483...27,794,768
Ensembl chr13:27,792,483...27,794,768
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:3639800|PMID:16715081) MGI PMID:16715081 MGI:3639800 NCBI chr 4:54,100,163...54,102,498
Ensembl chr 4:54,099,523...54,102,498
JBrowse link
G ID2 inhibitor of DNA binding 2 ISS UniProtKB GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G ISL1 ISL LIM homeobox 1 ISO (MGI:3041365|PMID:14766174) MGI PMID:14766174 MGI:3041365 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730
JBrowse link
G ISL2 ISL LIM homeobox 2 ISO (MGI:3041365|PMID:14766174) MGI PMID:14766174 MGI:3041365 NCBI chr15:76,336,773...76,342,475
Ensembl chr15:76,336,773...76,342,475
JBrowse link
G LBX1 ladybird homeobox 1 ISO (MGI:2179904|PMID:12062039) MGI PMID:12062039 MGI:2179904 NCBI chr10:101,226,976...101,228,960
Ensembl chr10:101,226,195...101,229,794
JBrowse link
G MYT1L myelin transcription factor 1 like ISS UniProtKB GO_REF:0000024 NCBI chr 2:1,789,113...2,331,388
Ensembl chr 2:1,789,113...2,331,664
JBrowse link
G NKX2-1 NK2 homeobox 1 ISO (MGI:3834782|PMID:18786356), (MGI:4437145|PMID:20181579) MGI PMID:18786356, PMID:20181579 MGI:3834782, MGI:4437145 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G NOTCH1 notch receptor 1 ISO (MGI:3604921|PMID:16120638) MGI PMID:16120638 MGI:3604921 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NOTCH3 notch receptor 3 IEA Ensembl GO_REF:0000107 NCBI chr19:15,159,038...15,200,995
Ensembl chr19:15,159,038...15,200,995
JBrowse link
G NRG1 neuregulin 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666
JBrowse link
G OLIG1 oligodendrocyte transcription factor 1 IEA Ensembl
InterPro
GO_REF:0000002, GO_REF:0000107 NCBI chr21:33,070,141...33,072,413
Ensembl chr21:33,070,141...33,072,413
JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 IEA Ensembl GO_REF:0000107 NCBI chr21:33,025,935...33,029,196
Ensembl chr21:33,025,935...33,029,196
JBrowse link
G OTX2 orthodenticle homeobox 2 ISO (MGI:5689191|PMID:26166575)
(MGI:3611719|PMID:16339193)
MGI PMID:16339193, PMID:26166575 MGI:3611719, MGI:5689191 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
G PAX3 paired box 3 ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,888...222,298,996
Ensembl chr 2:222,199,888...222,298,996
JBrowse link
G PAX6 paired box 6 NAS (PMID:17291498) UniProtKB PMID:17291498 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PAX7 paired box 7 IEA Ensembl GO_REF:0000107 NCBI chr 1:18,630,846...18,748,866
Ensembl chr 1:18,630,846...18,748,866
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISS UniProtKB GO_REF:0000024 NCBI chr 6:98,834,574...98,839,458
Ensembl chr 6:98,834,574...98,839,458
JBrowse link
G PTF1A pancreas associated transcription factor 1a IEA Ensembl GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245
JBrowse link
G RUNX1 RUNX family transcription factor 1 ISO (MGI:5641108|PMID:25834056) MGI PMID:25834056 MGI:5641108 NCBI chr21:34,787,801...35,049,334
Ensembl chr21:34,787,801...36,004,667
JBrowse link
G SHH sonic hedgehog signaling molecule ISS UniProtKB GO_REF:0000024 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SMAD4 SMAD family member 4 IEA Ensembl GO_REF:0000107 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:3664123|PMID:17015430) MGI PMID:17015430 MGI:3664123 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO (MGI:3588127|PMID:15744664) MGI PMID:15744664 MGI:3588127 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 ISS BHF-UCL GO_REF:0000024 NCBI chr 9:99,104,038...99,154,192
Ensembl chr 9:99,104,038...99,154,192
JBrowse link
G TUNAR TCL1 upstream neural differentiation-associated RNA ISO (MGI:5578435|PMID:24530304) MGI PMID:24530304 MGI:5578435 NCBI chr14:95,876,392...95,925,571
Ensembl chr14:95,876,392...95,925,571
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:3611719|PMID:16339193) MGI PMID:16339193 MGI:3611719 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
G ZNF521 zinc finger protein 521 IEA Ensembl GO_REF:0000107 NCBI chr18:25,061,924...25,352,194
Ensembl chr18:25,061,924...25,352,190
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 ISS (PMID:10080181) UniProtKB PMID:10080181 NCBI chr14:105,140,981...105,168,776
Ensembl chr14:105,140,982...105,168,824
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region IEA Ensembl GO_REF:0000107 NCBI chr 4:26,163,458...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:93,828,753...93,830,964
Ensembl chr 4:93,828,753...93,830,966
Ensembl chr 4:93,828,753...93,830,966
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:93,828,753...93,830,964
Ensembl chr 4:93,828,753...93,830,966
Ensembl chr 4:93,828,753...93,830,966
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:172,085,507...172,089,674
Ensembl chr 2:172,084,740...172,089,677
JBrowse link
G DLX2 distal-less homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:172,099,438...172,102,900
Ensembl chr 2:172,099,438...172,102,900
JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
G BCL11B BAF chromatin remodeling complex subunit BCL11B IEA Ensembl GO_REF:0000107 NCBI chr14:99,169,287...99,272,197
Ensembl chr14:99,169,287...99,272,197
JBrowse link
G FEZF2 FEZ family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:62,369,681...62,373,550
Ensembl chr 3:62,369,681...62,374,324
JBrowse link
G GATA2 GATA binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:128,479,422...128,493,201
Ensembl chr 3:128,479,427...128,493,201
Ensembl chr 3:128,479,427...128,493,201
JBrowse link
G PAX6 paired box 6 IEA Ensembl GO_REF:0000107 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G SATB2 SATB homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:199,269,500...199,471,266
Ensembl chr 2:199,269,500...199,471,266
JBrowse link
G TBR1 T-box brain transcription factor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:161,416,297...161,425,870
Ensembl chr 2:161,416,297...161,425,870
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX2 orthodenticle homeobox 2 ISO (MGI:2680889|PMID:14625556) MGI PMID:14625556 MGI:2680889 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX6 LIM homeobox 6 ISO (MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:3794908 NCBI chr 9:122,185,626...122,228,957
Ensembl chr 9:122,202,577...122,229,626
JBrowse link
G NKX2-1 NK2 homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:4397655|PMID:19749747) MGI PMID:19749747 MGI:4397655 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 1:10,636,604...10,796,650
Ensembl chr 1:10,636,604...10,796,650
JBrowse link
neuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 IEA Ensembl GO_REF:0000107 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,025,511...22,101,360
JBrowse link
G FEZF2 FEZ family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:62,369,681...62,373,550
Ensembl chr 3:62,369,681...62,374,324
JBrowse link
G FOXG1 forkhead box G1 IEA Ensembl GO_REF:0000107 NCBI chr14:28,766,787...28,770,277
Ensembl chr14:28,766,787...28,770,277
Ensembl chr14:28,766,787...28,770,277
JBrowse link
G LBX1 ladybird homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr10:101,226,976...101,228,960
Ensembl chr10:101,226,195...101,229,794
JBrowse link
G OTX2 orthodenticle homeobox 2 ISO (MGI:4360136|PMID:19592574) MGI PMID:19592574 MGI:4360136 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
G PRRX1 paired related homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:170,662,728...170,739,421
Ensembl chr 1:170,662,728...170,739,421
JBrowse link
G WNT1 Wnt family member 1 IEA Ensembl GO_REF:0000107 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
neuron fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISS UniProtKB GO_REF:0000024 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
G DLL1 delta like canonical Notch ligand 1 ISS UniProtKB GO_REF:0000024 NCBI chr 6:170,282,200...170,291,078
Ensembl chr 6:170,282,206...170,306,565
JBrowse link
G DMRTA2 DMRT like family A2 IEA Ensembl GO_REF:0000107 NCBI chr 1:50,417,550...50,423,443
Ensembl chr 1:50,417,550...50,423,443
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:5577209|PMID:24584053) MGI PMID:24584053 MGI:5577209 NCBI chr 6:31,879,759...31,897,698
Ensembl chr 6:31,879,759...31,897,687
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:71,197,433...71,548,104
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FEV FEV transcription factor, ETS family member IEA Ensembl GO_REF:0000107 NCBI chr 2:218,981,087...218,985,184
Ensembl chr 2:218,981,087...218,985,184
Ensembl chr 2:218,981,087...218,985,184
JBrowse link
G FOXA1 forkhead box A1 IEA Ensembl GO_REF:0000107 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
G FOXA2 forkhead box A2 ISO (MGI:3720545|PMID:17596284)
(MGI:3767119|PMID:17922007)
MGI PMID:17596284, PMID:17922007 MGI:3720545, MGI:3767119 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,581,005...22,585,455
JBrowse link
G GSX2 GS homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:54,100,163...54,102,498
Ensembl chr 4:54,099,523...54,102,498
JBrowse link
G ISL1 ISL LIM homeobox 1 ISS
IBA
(PMID:21873635) BHF-UCL
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730
JBrowse link
G ISL2 ISL LIM homeobox 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:76,336,773...76,342,475
Ensembl chr15:76,336,773...76,342,475
JBrowse link
G MYT1L myelin transcription factor 1 like ISS UniProtKB GO_REF:0000024 NCBI chr 2:1,789,113...2,331,388
Ensembl chr 2:1,789,113...2,331,664
JBrowse link
G NKX2-2 NK2 homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr20:21,511,010...21,514,064
Ensembl chr20:21,511,017...21,514,064
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr15:87,859,749...88,256,796
Ensembl chr15:87,859,751...88,256,768
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISS UniProtKB GO_REF:0000024 NCBI chr 6:98,834,574...98,839,458
Ensembl chr 6:98,834,574...98,839,458
JBrowse link
G POU4F1 POU class 4 homeobox 1 ISS BHF-UCL GO_REF:0000024 NCBI chr13:78,598,362...78,603,552
Ensembl chr13:78,598,362...78,603,552
JBrowse link
G SIX1 SIX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr14:60,643,421...60,649,489
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G TLX3 T cell leukemia homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:171,309,248...171,312,139
Ensembl chr 5:171,309,248...171,312,139
JBrowse link
noradrenergic neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IMP (PMID:14532329) UniProtKB PMID:14532329 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRP1 epithelial splicing regulatory protein 1 ISS UniProt GO_REF:0000024 NCBI chr 8:94,640,999...94,707,466
Ensembl chr 8:94,641,074...94,707,466
JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 1:10,636,604...10,796,650
Ensembl chr 1:10,636,604...10,796,650
JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,237,870
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr10:102,502,801...102,633,535
Ensembl chr10:102,503,987...102,633,535
Ensembl chr10:102,503,987...102,633,535
JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 ISS UniProtKB GO_REF:0000024 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,237,870
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr10:102,502,801...102,633,535
Ensembl chr10:102,503,987...102,633,535
Ensembl chr10:102,503,987...102,633,535
JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXC10 homeobox C10 IEA Ensembl GO_REF:0000107 NCBI chr12:53,985,146...53,990,279
Ensembl chr12:53,985,065...53,990,279
JBrowse link
G HOXD10 homeobox D10 IEA Ensembl GO_REF:0000107 NCBI chr 2:176,116,778...176,119,937
Ensembl chr 2:176,108,790...176,119,942
Ensembl chr 2:176,108,790...176,119,942
JBrowse link
G ISL1 ISL LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730
JBrowse link
G ISL2 ISL LIM homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr15:76,336,773...76,342,475
Ensembl chr15:76,336,773...76,342,475
JBrowse link
G LHX3 LIM homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:136,196,250...136,205,128
Ensembl chr 9:136,196,250...136,205,128
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:157,004,854...157,010,663
Ensembl chr 7:156,994,051...157,010,663
JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:137,492,199...137,494,394
Ensembl chr 6:137,492,199...137,494,394
JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
G GSX2 GS homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:54,100,163...54,102,498
Ensembl chr 4:54,099,523...54,102,498
JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISS UniProtKB GO_REF:0000024 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
G DLL4 delta like canonical Notch ligand 4 IMP (PMID:17728344) UniProtKB PMID:17728344 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G FOXN4 forkhead box N4 ISS UniProtKB GO_REF:0000024 NCBI chr12:109,277,978...109,309,406
Ensembl chr12:109,277,978...109,309,284
JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-2 NK2 homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr20:21,511,010...21,514,064
Ensembl chr20:21,511,017...21,514,064
JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr11:20,156,155...20,160,475
Ensembl chr11:20,156,155...20,160,475
JBrowse link
G DMRT3 doublesex and mab-3 related transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:976,655...991,732
Ensembl chr 9:976,655...991,732
JBrowse link
G LHX3 LIM homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:136,196,250...136,205,128
Ensembl chr 9:136,196,250...136,205,128
JBrowse link
G SHH sonic hedgehog signaling molecule ISO PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SOX1 SRY-box transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr13:112,067,149...112,071,706
Ensembl chr13:112,067,149...112,071,706
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18672
    cellular process 17690
      cellular developmental process 4995
        cell fate commitment 297
          neuron fate commitment 75
            cardiac neuron fate commitment 0
            cerebral cortex GABAergic interneuron fate commitment 2
            forebrain neuron fate commitment + 10
            inner ear receptor cell fate commitment + 5
            neuron fate determination + 9
            neuron fate specification + 32
            noradrenergic neuron fate commitment + 1
            olfactory bulb interneuron fate commitment 0
            photoreceptor cell fate commitment + 3
            somatic motor neuron fate commitment + 0
            subpallium neuron fate commitment 2
            ventral spinal cord interneuron fate commitment + 12
Path 2
Term Annotations click to browse term
  biological_process 18672
    developmental process 7466
      anatomical structure development 6873
        multicellular organism development 6346
          system development 5749
            nervous system development 2886
              neurogenesis 1984
                generation of neurons 1839
                  neuron differentiation 1676
                    neuron fate commitment 75
                      cardiac neuron fate commitment 0
                      cerebral cortex GABAergic interneuron fate commitment 2
                      forebrain neuron fate commitment + 10
                      inner ear receptor cell fate commitment + 5
                      neuron fate determination + 9
                      neuron fate specification + 32
                      noradrenergic neuron fate commitment + 1
                      olfactory bulb interneuron fate commitment 0
                      photoreceptor cell fate commitment + 3
                      somatic motor neuron fate commitment + 0
                      subpallium neuron fate commitment 2
                      ventral spinal cord interneuron fate commitment + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.