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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron fate commitment
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Accession:GO:0048663 term browser browse the term
Definition:The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.
Synonyms:exact_synonym: neuron lineage restriction;   neuronal lineage restriction
 alt_id: GO:0042055


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neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (MGI:2651973|PMID:12629181), (MGI:3639800|PMID:16715081), (MGI:4353883|PMID:19191219)
(MGI:3587461|PMID:16020526)
(MGI:5897542|PMID:24243019)
MGI
UniProt
PMID:12629181, PMID:16020526, PMID:16715081, PMID:19191219, PMID:24243019 MGI:2651973, MGI:3587461, MGI:3639800, MGI:4353883, MGI:5897542 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G EPOP elongin BC and polycomb repressive complex 2 associated protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:23,549,088...23,552,433
Ensembl chr 9:23,549,615...23,550,754
JBrowse link
G FOXN4 forkhead box N4 ISO (MGI:3587461|PMID:16020526) MGI PMID:16020526 MGI:3587461 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602
JBrowse link
G GATA2 GATA binding protein 2 ISO (MGI:3827070|PMID:19088086) MGI PMID:19088086 MGI:3827070 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991
JBrowse link
G GBX1 gastrulation brain homeobox 1 ISO (MGI:5511092|PMID:24010020) MGI PMID:24010020 MGI:5511092 NCBI chr16:15,195,705...15,213,425 JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:3610448|PMID:16168404) MGI PMID:16168404 MGI:3610448 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GSX1 GS homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr25:11,853,483...11,855,169
Ensembl chr25:11,853,462...11,855,445
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:3639800|PMID:16715081) MGI PMID:16715081 MGI:3639800 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:4821067|PMID:17681138) UniProt PMID:17681138 MGI:4821067 NCBI chr10:54,954,852...54,957,116 JBrowse link
G ISL1 ISL LIM homeobox 1 ISO (MGI:3041365|PMID:14766174) MGI PMID:14766174 MGI:3041365 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183
JBrowse link
G LBX1 ladybird homeobox 1 ISO (MGI:2179904|PMID:12062039) MGI PMID:12062039 MGI:2179904 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486
JBrowse link
G MYT1L myelin transcription factor 1 like ISO (MGI:5897487|PMID:28379941), (MGI:5897542|PMID:24243019) UniProt PMID:24243019, PMID:28379941 MGI:5897487, MGI:5897542 NCBI chr17:920,727...1,325,335
Ensembl chr17:922,276...1,057,585
JBrowse link
G NOTCH1 notch receptor 1 ISO (MGI:3604921|PMID:16120638) MGI PMID:16120638 MGI:3604921 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NOTCH3 notch receptor 3 IEA Ensembl GO_REF:0000107 NCBI chr20:46,946,654...46,978,821
Ensembl chr20:46,937,485...46,978,219
JBrowse link
G NRG1 neuregulin 1 IEA Ensembl GO_REF:0000107 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932
JBrowse link
G OLIG1 oligodendrocyte transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr31:27,718,925...27,721,301
Ensembl chr31:27,719,026...27,719,862
JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822
JBrowse link
G OTX2 orthodenticle homeobox 2 ISO (MGI:3611719|PMID:16339193)
(MGI:5689191|PMID:26166575)
MGI PMID:16339193, PMID:26166575 MGI:3611719, MGI:5689191 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G PAX3 paired box 3 ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr37:28,346,476...28,443,648
Ensembl chr37:28,346,563...28,444,561
JBrowse link
G PAX7 paired box 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:79,813,835...79,952,490
Ensembl chr 2:79,815,748...79,915,003
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISO (MGI:5897542|PMID:24243019) UniProt PMID:24243019 MGI:5897542 NCBI chr12:57,103,712...57,108,522 JBrowse link
G PTF1A pancreas associated transcription factor 1a ISO (MGI:3590363|PMID:16039563) MGI PMID:16039563 MGI:3590363 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336
JBrowse link
G RUNX1 RUNX family transcription factor 1 ISO (MGI:5641108|PMID:25834056) MGI PMID:25834056 MGI:5641108 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMAD4 SMAD family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:3664123|PMID:17015430) MGI PMID:17015430 MGI:3664123 NCBI chr34:14,853,000...14,855,153 JBrowse link
G TGFB2 transforming growth factor beta 2 ISO (MGI:3588127|PMID:15744664) MGI PMID:15744664 MGI:3588127 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr11:56,191,383...56,223,042
Ensembl chr11:56,161,772...56,218,594
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:3611719|PMID:16339193) MGI PMID:16339193 MGI:3611719 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G ZNF521 zinc finger protein 521 IEA Ensembl GO_REF:0000107 NCBI chr 7:63,146,696...63,421,790
Ensembl chr 7:63,146,690...63,421,792
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:72,535,539...72,553,531
Ensembl chr 8:72,535,107...72,550,322
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region IEA Ensembl GO_REF:0000107 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chr37:25,616,942...25,622,989 JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886
JBrowse link
G DLX2 distal-less homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510
JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G BCL11B BAF chromatin remodeling complex subunit BCL11B IEA Ensembl GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404
JBrowse link
G FEZF2 FEZ family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282
JBrowse link
G GATA2 GATA binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991
JBrowse link
G SATB2 SATB homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr37:8,548,295...8,837,416
Ensembl chr37:8,551,017...8,731,149
JBrowse link
G TBR1 T-box brain transcription factor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX2 orthodenticle homeobox 2 ISO (MGI:2680889|PMID:14625556) MGI PMID:14625556 MGI:2680889 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX6 LIM homeobox 6 ISO (MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:3794908 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024
JBrowse link
G NKX2-1 NK2 homeobox 1 IEA Ensembl GO_REF:0000107
G TFAP2C transcription factor AP-2 gamma ISO (MGI:4397655|PMID:19749747) MGI PMID:19749747 MGI:4397655 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920
JBrowse link
neuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 ISO (MGI:3664674|PMID:16892058) MGI PMID:16892058 MGI:3664674 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G FEZF2 FEZ family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282
JBrowse link
G FOXG1 forkhead box G1 ISO (MGI:5440366|PMID:22726835) MGI PMID:22726835 MGI:5440366 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G LBX1 ladybird homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486
JBrowse link
G OTX2 orthodenticle homeobox 2 ISO (MGI:4360136|PMID:19592574) MGI PMID:19592574 MGI:4360136 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G PRRX1 paired related homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:3611719|PMID:16339193) MGI PMID:16339193 MGI:3611719 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
neuron fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G DLL1 delta like canonical Notch ligand 1 IEA Ensembl GO_REF:0000107 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DMRTA2 DMRT like family A2 ISO (MGI:5013657|PMID:21576465) MGI PMID:21576465 MGI:5013657 NCBI chr15:10,706,096...10,710,506 JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:5577209|PMID:24584053) MGI PMID:24584053 MGI:5577209 NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653
JBrowse link
G FEV FEV transcription factor, ETS family member ISO (MGI:4836772|PMID:20818386) MGI PMID:20818386 MGI:4836772 NCBI chr37:25,548,578...25,552,092 JBrowse link
G FOXA1 forkhead box A1 IEA Ensembl GO_REF:0000107 NCBI chr 8:16,072,629...16,083,105
Ensembl chr 8:16,079,140...16,083,807
JBrowse link
G FOXA2 forkhead box A2 ISO (MGI:3720545|PMID:17596284)
(MGI:3767119|PMID:17922007)
MGI PMID:17596284, PMID:17922007 MGI:3720545, MGI:3767119 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:3579956|PMID:15930101) MGI PMID:15930101 MGI:3579956 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
G ISL1 ISL LIM homeobox 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183
JBrowse link
G MYT1L myelin transcription factor 1 like IEA Ensembl GO_REF:0000107 NCBI chr17:920,727...1,325,335
Ensembl chr17:922,276...1,057,585
JBrowse link
G NKX2-2 NK2 homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:15247919 RGD:2325628 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISO (MGI:5897542|PMID:24243019) UniProt PMID:24243019 MGI:5897542 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU4F1 POU class 4 homeobox 1 ISO (MGI:4367920|PMID:19877281), (MGI:4454975|PMID:20096094) BHF-UCL PMID:19877281, PMID:20096094 MGI:4367920, MGI:4454975 NCBI chr22:31,992,657...31,997,066 JBrowse link
G SIX1 SIX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G TLX3 T cell leukemia homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 4:40,816,351...40,818,582
Ensembl chr 4:40,816,467...40,818,723
JBrowse link
noradrenergic neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRP1 epithelial splicing regulatory protein 1 ISO (MGI:5915403|PMID:29107558) UniProt PMID:29107558 MGI:5915403 NCBI chr29:39,322,516...39,388,363
Ensembl chr29:39,333,117...39,387,337
JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920
JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXC10 homeobox C10 IEA Ensembl GO_REF:0000107 NCBI chr27:1,272,272...1,277,411
Ensembl chr27:1,273,131...1,323,370
JBrowse link
G HOXD10 homeobox D10 IEA Ensembl GO_REF:0000107 NCBI chr36:19,924,352...19,927,706
Ensembl chr36:19,916,175...19,927,724
JBrowse link
G ISL1 ISL LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183
JBrowse link
G LHX3 LIM homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:19,509,038...19,514,378
Ensembl chr16:19,499,582...19,512,836
JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:29,919,043...29,921,713
Ensembl chr 1:29,920,190...29,921,008
JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:1928687|PMID:11124115) MGI PMID:11124115 MGI:1928687 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G DLL4 delta like canonical Notch ligand 4 IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940
JBrowse link
G FOXN4 forkhead box N4 IEA Ensembl GO_REF:0000107 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602
JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-2 NK2 homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874
JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr21:42,207,205...42,214,954
Ensembl chr21:42,208,346...42,212,415
JBrowse link
G DMRT3 doublesex and mab-3 related transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:89,798,215...89,813,140
Ensembl chr 1:89,798,100...89,812,328
JBrowse link
G LHX3 LIM homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118
JBrowse link
G SHH sonic hedgehog signaling molecule ISO PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SOX1 SRY-box transcription factor 1 ISO (MGI:4834949|PMID:20844123) MGI PMID:20844123 MGI:4834949 NCBI chr22:59,902,113...59,903,820 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    cellular process 15467
      cellular developmental process 4137
        cell fate commitment 274
          neuron fate commitment 72
            cardiac neuron fate commitment 0
            cerebral cortex GABAergic interneuron fate commitment 2
            forebrain neuron fate commitment + 9
            inner ear receptor cell fate commitment + 5
            neuron fate determination + 9
            neuron fate specification + 31
            noradrenergic neuron fate commitment + 1
            olfactory bulb interneuron fate commitment 0
            photoreceptor cell fate commitment + 3
            somatic motor neuron fate commitment + 0
            subpallium neuron fate commitment 2
            ventral spinal cord interneuron fate commitment + 12
Path 2
Term Annotations click to browse term
  biological_process 16190
    developmental process 6310
      anatomical structure development 5858
        multicellular organism development 5351
          system development 4984
            nervous system development 2586
              neurogenesis 1855
                generation of neurons 1707
                  neuron differentiation 1555
                    neuron fate commitment 72
                      cardiac neuron fate commitment 0
                      cerebral cortex GABAergic interneuron fate commitment 2
                      forebrain neuron fate commitment + 9
                      inner ear receptor cell fate commitment + 5
                      neuron fate determination + 9
                      neuron fate specification + 31
                      noradrenergic neuron fate commitment + 1
                      olfactory bulb interneuron fate commitment 0
                      photoreceptor cell fate commitment + 3
                      somatic motor neuron fate commitment + 0
                      subpallium neuron fate commitment 2
                      ventral spinal cord interneuron fate commitment + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.