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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron fate commitment
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Accession:GO:0048663 term browser browse the term
Definition:The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.
Synonyms:exact_synonym: neuron lineage restriction;   neuronal lineage restriction
 alt_id: GO:0042055


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neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (MGI:2651973|PMID:12629181), (MGI:3639800|PMID:16715081), (MGI:4353883|PMID:19191219)
(MGI:5897542|PMID:24243019)
(MGI:3587461|PMID:16020526)
MGI
UniProt
PMID:12629181, PMID:16020526, PMID:16715081, PMID:19191219, PMID:24243019 MGI:2651973, MGI:3587461, MGI:3639800, MGI:4353883, MGI:5897542 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (MGI:3761972|PMID:17698011) MGI PMID:17698011 MGI:3761972 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G EPOP elongin BC and polycomb repressive complex 2 associated protein ISO (MGI:5507920|PMID:23180766) MGI PMID:23180766 MGI:5507920 NCBI chr17:18,599,046...18,602,293 JBrowse link
G FOXN4 forkhead box N4 ISO (MGI:3587461|PMID:16020526) MGI PMID:16020526 MGI:3587461 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025
JBrowse link
G GATA2 GATA binding protein 2 ISO (MGI:3827070|PMID:19088086) MGI PMID:19088086 MGI:3827070 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035
JBrowse link
G GBX1 gastrulation brain homeobox 1 ISO (MGI:5511092|PMID:24010020) MGI PMID:24010020 MGI:5511092 NCBI chr 7:142,733,463...142,754,447
Ensembl chr 7:154,888,479...154,907,060
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:3610448|PMID:16168404) MGI PMID:16168404 MGI:3610448 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G GSX1 GS homeobox 1 ISO (MGI:3639800|PMID:16715081) MGI PMID:16715081 MGI:3639800 NCBI chr13:9,082,674...9,085,014
Ensembl chr13:27,427,569...27,428,876
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:3639800|PMID:16715081) MGI PMID:16715081 MGI:3639800 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:4821067|PMID:17681138) UniProt PMID:17681138 MGI:4821067 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G ISL1 ISL LIM homeobox 1 ISO (MGI:3041365|PMID:14766174) MGI PMID:14766174 MGI:3041365 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674
JBrowse link
G ISL2 ISL LIM homeobox 2 ISO (MGI:3041365|PMID:14766174) MGI PMID:14766174 MGI:3041365 NCBI chr15:55,250,837...55,257,775
Ensembl chr15:74,843,797...74,848,635
JBrowse link
G LBX1 ladybird homeobox 1 ISO (MGI:2179904|PMID:12062039) MGI PMID:12062039 MGI:2179904 NCBI chr10:97,830,026...97,832,751 JBrowse link
G MYT1L myelin transcription factor 1 like ISO (MGI:5897487|PMID:28379941), (MGI:5897542|PMID:24243019) UniProt PMID:24243019, PMID:28379941 MGI:5897487, MGI:5897542 NCBI chr2A:1,744,466...2,332,146
Ensembl chr2A:1,735,673...1,927,123
JBrowse link
G NOTCH1 notch receptor 1 ISO (MGI:3604921|PMID:16120638) MGI PMID:16120638 MGI:3604921 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G NOTCH3 notch receptor 3 ISO (MGI:3604921|PMID:16120638) MGI PMID:16120638 MGI:3604921 NCBI chr19:14,692,571...14,733,758
Ensembl chr19:15,678,674...15,715,080
JBrowse link
G NRG1 neuregulin 1 ISO (MGI:2136155|PMID:11425901) MGI PMID:11425901 MGI:2136155 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977
JBrowse link
G OLIG1 oligodendrocyte transcription factor 1 ISO (MGI:2177979|PMID:11955448) MGI PMID:11955448 MGI:2177979 NCBI chr21:19,432,165...19,434,481 JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 ISO (MGI:2177979|PMID:11955448) MGI PMID:11955448 MGI:2177979 NCBI chr21:19,387,860...19,391,291 JBrowse link
G OTX2 orthodenticle homeobox 2 ISO (MGI:3611719|PMID:16339193)
(MGI:5689191|PMID:26166575)
MGI PMID:16339193, PMID:26166575 MGI:3611719, MGI:5689191 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012
JBrowse link
G PAX3 paired box 3 ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr2B:109,441,938...109,541,449
Ensembl chr2B:228,022,453...228,121,874
JBrowse link
G PAX7 paired box 7 ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr 1:17,589,513...17,707,442
Ensembl chr 1:18,639,641...18,756,952
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISO (MGI:5897542|PMID:24243019) UniProt PMID:24243019 MGI:5897542 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G PTF1A pancreas associated transcription factor 1a ISO (MGI:3590363|PMID:16039563) MGI PMID:16039563 MGI:3590363 NCBI chr10:23,356,165...23,359,579 JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:3608263|PMID:16221724) MGI PMID:16221724 MGI:3608263 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SMAD4 SMAD family member 4 ISO (MGI:3761972|PMID:17698011) MGI PMID:17698011 MGI:3761972 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:3664123|PMID:17015430) MGI PMID:17015430 MGI:3664123 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO (MGI:3588127|PMID:15744664) MGI PMID:15744664 MGI:3588127 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 ISO (MGI:3588127|PMID:15744664) MGI PMID:15744664 MGI:3588127 NCBI chr 9:70,195,007...70,243,514
Ensembl chr 9:98,332,739...98,362,748
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:3611719|PMID:16339193) MGI PMID:16339193 MGI:3611719 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link
G ZNF521 zinc finger protein 521 ISO (MGI:5641108|PMID:25834056) MGI PMID:25834056 MGI:5641108 NCBI chr18:18,319,311...18,611,564
Ensembl chr18:22,062,675...22,220,607
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 ISO (MGI:1332721|PMID:10080181) UniProt PMID:10080181 MGI:1332721 NCBI chr14:85,785,586...85,812,056
Ensembl chr14:105,569,837...105,585,878
JBrowse link
G NOTCH1 notch receptor 1 ISO (MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:3833041 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:3833041 NCBI chr 4:20,719,548...20,835,439
Ensembl chr 4:25,995,263...26,107,683
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 ISO (MGI:3611666|PMID:16407553) MGI PMID:16407553 MGI:3611666 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 ISO (MGI:1339217|PMID:10364557) MGI PMID:10364557 MGI:1339217 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 ISO (MGI:3775335|PMID:17678855) MGI PMID:17678855 MGI:3775335 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909
JBrowse link
G DLX2 distal-less homeobox 2 ISO (MGI:3775335|PMID:17678855) MGI PMID:17678855 MGI:3775335 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079
JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (MGI:5439194|PMID:22991444) MGI PMID:22991444 MGI:5439194 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999
JBrowse link
G BCL11B BAF chromatin remodeling complex subunit BCL11B ISO (MGI:5464968|PMID:23144223) MGI PMID:23144223 MGI:5464968 NCBI chr14:79,795,262...79,898,472 JBrowse link
G FEZF2 FEZ family zinc finger 2 ISO (MGI:5140686|PMID:21338885)
(MGI:5464968|PMID:23144223)
MGI PMID:21338885, PMID:23144223 MGI:5140686, MGI:5464968 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052
JBrowse link
G GATA2 GATA binding protein 2 ISO (MGI:5439194|PMID:22991444) MGI PMID:22991444 MGI:5439194 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035
JBrowse link
G PAX6 paired box 6 ISO (MGI:1928687|PMID:11124115) MGI PMID:11124115 MGI:1928687 NCBI chr11:31,753,190...31,782,225 JBrowse link
G SATB2 SATB homeobox 2 ISO (MGI:5464968|PMID:23144223) MGI PMID:23144223 MGI:5464968 NCBI chr2B:86,518,043...86,720,212
Ensembl chr2B:204,406,887...204,599,539
JBrowse link
G TBR1 T-box brain transcription factor 1 ISO (MGI:5464968|PMID:23144223) MGI PMID:23144223 MGI:5464968 NCBI chr2B:48,709,687...48,719,382 JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX2 orthodenticle homeobox 2 ISO (MGI:2680889|PMID:14625556) MGI PMID:14625556 MGI:2680889 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012
JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX6 LIM homeobox 6 ISO (MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:3794908 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:4397655|PMID:19749747) MGI PMID:19749747 MGI:4397655 NCBI chr20:52,966,907...52,981,024
Ensembl chr20:54,255,489...54,265,432
JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091
JBrowse link
neuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 ISO (MGI:3664674|PMID:16892058) MGI PMID:16892058 MGI:3664674 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G FEZF2 FEZ family zinc finger 2 ISO (MGI:5604297|PMID:24997765) MGI PMID:24997765 MGI:5604297 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052
JBrowse link
G FOXG1 forkhead box G1 ISO (MGI:5440366|PMID:22726835) MGI PMID:22726835 MGI:5440366 NCBI chr14:9,545,147...9,572,309 JBrowse link
G LBX1 ladybird homeobox 1 ISO (MGI:3607682|PMID:16234809) MGI PMID:16234809 MGI:3607682 NCBI chr10:97,830,026...97,832,751 JBrowse link
G OTX2 orthodenticle homeobox 2 ISO (MGI:4360136|PMID:19592574) MGI PMID:19592574 MGI:4360136 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012
JBrowse link
G PRRX1 paired related homeobox 1 ISO (MGI:5486509|PMID:23447615) MGI PMID:23447615 MGI:5486509 NCBI chr 1:146,151,633...146,227,926
Ensembl chr 1:149,867,634...149,943,810
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:3611719|PMID:16339193) MGI PMID:16339193 MGI:3611719 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link
neuron fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (MGI:3639051|PMID:16469766)
(MGI:5897542|PMID:24243019)
MGI
UniProt
PMID:16469766, PMID:24243019 MGI:3639051, MGI:5897542 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999
JBrowse link
G DLL1 delta like canonical Notch ligand 1 ISO (MGI:3823133|PMID:18997111) UniProt PMID:18997111 MGI:3823133 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link
G DMRTA2 DMRT like family A2 ISO (MGI:5013657|PMID:21576465) MGI PMID:21576465 MGI:5013657 NCBI chr 1:49,659,379...49,665,262 JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO (MGI:5577209|PMID:24584053) MGI PMID:24584053 MGI:5577209 NCBI chr 6:31,542,946...31,560,894
Ensembl chr 6:32,429,271...32,451,844
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 ISO (MGI:5319720|PMID:22513373) MGI PMID:22513373 MGI:5319720 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G FEV FEV transcription factor, ETS family member ISO (MGI:4836772|PMID:20818386) MGI PMID:20818386 MGI:4836772 NCBI chr2B:106,238,933...106,243,499 JBrowse link
G FOXA1 forkhead box A1 ISO (MGI:3720545|PMID:17596284) MGI PMID:17596284 MGI:3720545 NCBI chr14:18,347,284...18,352,705 JBrowse link
G FOXA2 forkhead box A2 ISO (MGI:3720545|PMID:17596284)
(MGI:3767119|PMID:17922007)
MGI PMID:17596284, PMID:17922007 MGI:3720545, MGI:3767119 NCBI chr20:22,519,942...22,524,262 JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:3579956|PMID:15930101) MGI PMID:15930101 MGI:3579956 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715
JBrowse link
G ISL1 ISL LIM homeobox 1 ISO (MGI:3815381|PMID:18849985) BHF-UCL PMID:18849985 MGI:3815381 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674
JBrowse link
G MYT1L myelin transcription factor 1 like ISO (MGI:5897487|PMID:28379941), (MGI:5897542|PMID:24243019) UniProt PMID:24243019, PMID:28379941 MGI:5897487, MGI:5897542 NCBI chr2A:1,744,466...2,332,146
Ensembl chr2A:1,735,673...1,927,123
JBrowse link
G NKX2-2 NK2 homeobox 2 ISO (MGI:3611719|PMID:16339193)
(MGI:4360136|PMID:19592574)
MGI PMID:16339193, PMID:19592574 MGI:3611719, MGI:4360136 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:15247919 RGD:2325628 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISO (MGI:5897542|PMID:24243019) UniProt PMID:24243019 MGI:5897542 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G POU4F1 POU class 4 homeobox 1 ISO (MGI:4367920|PMID:19877281), (MGI:4454975|PMID:20096094) BHF-UCL PMID:19877281, PMID:20096094 MGI:4367920, MGI:4454975 NCBI chr13:59,821,614...59,829,671 JBrowse link
G SIX1 SIX homeobox 1 ISO (MGI:5319720|PMID:22513373) MGI PMID:22513373 MGI:5319720 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G TLX3 T cell leukemia homeobox 3 ISO (MGI:3607682|PMID:16234809) MGI PMID:16234809 MGI:3607682 NCBI chr 5:166,658,166...166,661,098
Ensembl chr 5:173,411,881...173,414,106
JBrowse link
noradrenergic neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (PMID:14532329) UniProtKB PMID:14532329 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRP1 epithelial splicing regulatory protein 1 ISO (MGI:5915403|PMID:29107558) UniProt PMID:29107558 MGI:5915403 NCBI chr 8:91,261,488...91,327,990
Ensembl chr 8:93,203,198...93,530,653
JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091
JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 ISO (MGI:3051712|PMID:15215207) MGI PMID:15215207 MGI:3051712 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:3051712|PMID:15215207) MGI PMID:15215207 MGI:3051712 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472
JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 ISO (MGI:3051712|PMID:15215207) MGI PMID:15215207 MGI:3051712 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:3051712|PMID:15215207) MGI PMID:15215207 MGI:3051712 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472
JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXC10 homeobox C10 ISO (MGI:3771768|PMID:18065432) MGI PMID:18065432 MGI:3771768 NCBI chr12:34,764,956...34,770,088
Ensembl chr12:35,553,262...35,558,393
JBrowse link
G HOXD10 homeobox D10 ISO (MGI:3771768|PMID:18065432) MGI PMID:18065432 MGI:3771768 NCBI chr2B:63,395,636...63,399,704
Ensembl chr2B:181,104,876...181,110,963
JBrowse link
G ISL1 ISL LIM homeobox 1 ISO (MGI:4356383|PMID:19666821) MGI PMID:19666821 MGI:4356383 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674
JBrowse link
G ISL2 ISL LIM homeobox 2 ISO (MGI:4356383|PMID:19666821) MGI PMID:19666821 MGI:4356383 NCBI chr15:55,250,837...55,257,775
Ensembl chr15:74,843,797...74,848,635
JBrowse link
G LHX3 LIM homeobox 3 ISO (MGI:4356383|PMID:19666821) MGI PMID:19666821 MGI:4356383 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 ISO (MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:1344237 NCBI chr 7:148,622,701...148,628,532 JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 ISO (MGI:3531376|PMID:15769945) MGI PMID:15769945 MGI:3531376 NCBI chr 6:135,245,422...135,248,355
Ensembl chr 6:139,333,938...139,334,756
JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (MGI:1321050|PMID:9876181) MGI PMID:9876181 MGI:1321050 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999
JBrowse link
G GSX2 GS homeobox 2 ISO (MGI:1928687|PMID:11124115) MGI PMID:11124115 MGI:1928687 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715
JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO (MGI:3587461|PMID:16020526) UniProt PMID:16020526 MGI:3587461 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999
JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISO (PMID:17728344) UniProtKB PMID:17728344 NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471
JBrowse link
G FOXN4 forkhead box N4 ISO (MGI:3587461|PMID:16020526), (MGI:3765356|PMID:17728344) UniProt PMID:16020526, PMID:17728344 MGI:3587461, MGI:3765356 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025
JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-2 NK2 homeobox 2 ISO (MGI:1334824|PMID:10217145) MGI PMID:10217145 MGI:1334824 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492
JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 ISO (MGI:2136554|PMID:11239429) MGI PMID:11239429 MGI:2136554 NCBI chr11:20,180,704...20,185,164
Ensembl chr11:20,092,540...20,097,727
JBrowse link
G DMRT3 doublesex and mab-3 related transcription factor 3 ISO (MGI:5435948|PMID:22932389) MGI PMID:22932389 MGI:5435948 NCBI chr 9:786,402...801,114 JBrowse link
G LHX3 LIM homeobox 3 ISO (MGI:4356383|PMID:19666821) MGI PMID:19666821 MGI:4356383 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366
JBrowse link
G SHH sonic hedgehog signaling molecule ISO PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SOX1 SRY-box transcription factor 1 ISO (MGI:4834949|PMID:20844123) MGI PMID:20844123 MGI:4834949 NCBI chr13:93,023,958...93,269,467 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    cellular process 11671
      cellular developmental process 3766
        cell fate commitment 243
          neuron fate commitment 72
            cardiac neuron fate commitment 0
            cerebral cortex GABAergic interneuron fate commitment 2
            forebrain neuron fate commitment + 9
            inner ear receptor cell fate commitment + 5
            neuron fate determination + 9
            neuron fate specification + 32
            noradrenergic neuron fate commitment + 1
            olfactory bulb interneuron fate commitment 0
            photoreceptor cell fate commitment + 3
            somatic motor neuron fate commitment + 0
            subpallium neuron fate commitment 2
            ventral spinal cord interneuron fate commitment + 12
Path 2
Term Annotations click to browse term
  biological_process 12566
    developmental process 5839
      anatomical structure development 5452
        multicellular organism development 4984
          system development 4688
            nervous system development 2406
              neurogenesis 1723
                generation of neurons 1578
                  neuron differentiation 1429
                    neuron fate commitment 72
                      cardiac neuron fate commitment 0
                      cerebral cortex GABAergic interneuron fate commitment 2
                      forebrain neuron fate commitment + 9
                      inner ear receptor cell fate commitment + 5
                      neuron fate determination + 9
                      neuron fate specification + 32
                      noradrenergic neuron fate commitment + 1
                      olfactory bulb interneuron fate commitment 0
                      photoreceptor cell fate commitment + 3
                      somatic motor neuron fate commitment + 0
                      subpallium neuron fate commitment 2
                      ventral spinal cord interneuron fate commitment + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.