Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:anatomical structure formation involved in morphogenesis
go back to main search page
Accession:GO:0048646 term browser browse the term
Definition:The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.
Comment:Note that, for example, the formation of a pseudopod in an amoeba would not be considered formation involved in morphogenesis because it would not be thought of as the formation of an anatomical structure that was part of the shaping of the amoeba during its development. The formation of an axon from a neuron would be considered the formation of an anatomical structure involved in morphogenesis because it contributes to the creation of the form of the neuron in a developmental sense.
Synonyms:exact_synonym: formation of an anatomical structure involved in morphogenesis


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
anatomical structure formation involved in morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3654583|PMID:16916379) MGI
Ensembl
PMID:16916379 GO_REF:0000107 MGI:3654583 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3765253|PMID:17878916)
(MGI:1332362|PMID:10049573), (MGI:3701027|PMID:16854970)
MGI
Ensembl
PMID:10049573 PMID:16854970 PMID:17878916 GO_REF:0000107 MGI:1332362 MGI:3701027 MGI:3765253 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3765253|PMID:17878916) MGI
TreeGrafter
Ensembl
PMID:17878916 GO_REF:0000107 GO_REF:0000118 MGI:3765253 NCBI chrNW_004936585:3,462,063...3,466,641
Ensembl chrNW_004936585:3,461,944...3,466,641
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3765253|PMID:17878916) MGI
Ensembl
PMID:17878916 GO_REF:0000107 MGI:3765253 NCBI chrNW_004936585:3,477,081...3,481,087
Ensembl chrNW_004936585:3,476,692...3,481,087
JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486225|PMID:23383217) MGI
Ensembl
PMID:23383217 GO_REF:0000107 MGI:5486225 NCBI chrNW_004936494:11,529,546...11,535,224
Ensembl chrNW_004936494:11,529,546...11,535,224
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:5486225|PMID:23383217)
(MGI:1344734|PMID:10498685)
MGI PMID:10498685 PMID:23383217 MGI:1344734 MGI:5486225 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611949|PMID:16319112) MGI
Ensembl
PMID:16319112 GO_REF:0000107 MGI:3611949 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1277743|PMID:9731531) MGI
Ensembl
PMID:9731531 GO_REF:0000107 MGI:1277743 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1277743|PMID:9731531) MGI
Ensembl
PMID:9731531 GO_REF:0000107 MGI:1277743 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Grb2 growth factor receptor bound protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934095|PMID:11369229) MGI
Ensembl
PMID:11369229 GO_REF:0000107 MGI:1934095 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO (MGI:1346308|PMID:10529420) MGI PMID:10529420 MGI:1346308 NCBI chrNW_004936478:3,721,662...3,724,471
Ensembl chrNW_004936478:3,721,662...3,724,433
JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1346308|PMID:10529420) MGI
Ensembl
PMID:10529420 GO_REF:0000107 MGI:1346308 NCBI chrNW_004936490:12,853,983...12,855,428
Ensembl chrNW_004936490:12,853,983...12,855,428
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1344734|PMID:10498685)
(MGI:3580024|PMID:15930111)
MGI
Ensembl
PMID:10498685 PMID:15930111 GO_REF:0000107 MGI:1344734 MGI:3580024 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2154554|PMID:11719201) MGI
Ensembl
PMID:11719201 GO_REF:0000107 MGI:2154554 NCBI chrNW_004936487:12,395,817...12,413,860
Ensembl chrNW_004936487:12,395,812...12,414,003
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714586|PMID:17522155) MGI
Ensembl
PMID:17522155 GO_REF:0000107 MGI:3714586 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:67405|PMID:7924997) MGI
Ensembl
PMID:7924997 GO_REF:0000107 MGI:67405 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3654583|PMID:16916379) MGI
Ensembl
PMID:16916379 GO_REF:0000107 MGI:3654583 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1289788|PMID:9768363) MGI
Ensembl
PMID:9768363 GO_REF:0000107 MGI:1289788 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:1316886|PMID:9851841)
(MGI:3714586|PMID:17522155)
MGI PMID:9851841 PMID:17522155 MGI:1316886 MGI:3714586 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO (MGI:4366226|PMID:19096026) MGI PMID:19096026 MGI:4366226 NCBI chrNW_004936510:6,366,450...6,396,056
Ensembl chrNW_004936510:6,366,846...6,393,882
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3765253|PMID:17878916) MGI
Ensembl
PMID:17878916 GO_REF:0000107 MGI:3765253 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
abducens nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chrNW_004936478:3,721,662...3,724,471
Ensembl chrNW_004936478:3,721,662...3,724,433
JBrowse link
G Mafb MAF bZIP transcription factor B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:1,007,273...1,010,548
Ensembl chrNW_004936561:1,007,647...1,008,618
JBrowse link
acrosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acrbp acrosin binding protein involved_in ISO (MGI:5789676|PMID:27303034) UniProt PMID:27303034 MGI:5789676 NCBI chrNW_004936709:1,148,454...1,158,069 JBrowse link
G Actl7a actin like 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:3,983,288...3,986,932
Ensembl chrNW_004936559:3,985,327...3,986,649
JBrowse link
G Actl9 actin like 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,415,699...5,416,946
Ensembl chrNW_004936588:5,415,699...5,416,946
JBrowse link
G Agfg1 ArfGAP with FG repeats 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153561|PMID:11711676), (MGI:3040020|PMID:14724135) MGI
TreeGrafter
PMID:11711676 PMID:14724135 GO_REF:0000118 MGI:2153561 MGI:3040020 NCBI chrNW_004936525:8,463,475...8,504,201
Ensembl chrNW_004936525:8,463,475...8,504,188
JBrowse link
G Agfg2 ArfGAP with FG repeats 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:598,211...623,668
Ensembl chrNW_004936543:598,158...625,926
JBrowse link
G Ccdc136 coiled-coil domain containing 136 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:15,721,463...15,750,535 JBrowse link
G Ccdc38 coiled-coil domain containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936507:11,980,455...12,021,722
Ensembl chrNW_004936507:11,981,342...12,021,722
JBrowse link
G Ccdc42 coiled-coil domain containing 42 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5774582|PMID:26945718) MGI
Ensembl
PMID:26945718 GO_REF:0000107 MGI:5774582 NCBI chrNW_004936595:1,907,312...1,919,305
Ensembl chrNW_004936595:1,907,312...1,919,305
JBrowse link
G Fabp9 fatty acid binding protein 9 ISO RGD PMID:7958448 RGD:634410 NCBI chrNW_004936656:2,733,877...2,737,842
Ensembl chrNW_004936656:2,734,302...2,737,850
JBrowse link
G Fam209a family with sequence similarity 209 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936875:415,041...419,227 JBrowse link
G Garin1a golgi associated RAB2 interactor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,596,968...15,607,416
Ensembl chrNW_004936479:15,596,968...15,607,276
JBrowse link
G Garin1b golgi associated RAB2 interactor 1B involved_in ISO (MGI:6814641|PMID:34714330) UniProt PMID:34714330 MGI:6814641 NCBI chrNW_004936479:15,634,904...15,647,361
Ensembl chrNW_004936479:15,633,526...15,653,954
JBrowse link
G Kiaa0319l KIAA0319 like acts_upstream_of_or_within ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chrNW_004936474:18,002,864...18,110,000
Ensembl chrNW_004936474:18,003,930...18,106,273
JBrowse link
G LOC101956962 thioredoxin domain-containing protein 8 ISO RGD PMID:15181017 RGD:1303999 NCBI chrNW_004936559:2,753,167...2,765,110 JBrowse link
G Mfsd14a major facilitator superfamily domain containing 14A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5763056|PMID:27107036) MGI
Ensembl
PMID:27107036 GO_REF:0000107 MGI:5763056 NCBI chrNW_004936748:211,620...247,710
Ensembl chrNW_004936748:211,561...250,272
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354802|PMID:10733589) MGI
TreeGrafter
Ensembl
PMID:10733589 GO_REF:0000107 GO_REF:0000118 MGI:1354802 NCBI chrNW_004936706:1,470,910...1,498,986
Ensembl chrNW_004936706:1,470,738...1,498,993
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681371|PMID:13129914) MGI
Ensembl
PMID:13129914 GO_REF:0000107 MGI:2681371 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015
JBrowse link
G Pdcl2 phosducin like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:7510055|PMID:36278277) MGI
Ensembl
PMID:36278277 GO_REF:0000107 MGI:7510055 NCBI chrNW_004936482:17,907,713...17,927,007
Ensembl chrNW_004936482:17,907,713...17,932,224
JBrowse link
G Pfn4 profilin family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,888,211...7,891,273
Ensembl chrNW_004936493:7,888,968...7,892,000
JBrowse link
G Pla2g3 phospholipase A2 group III acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4459354|PMID:20424323) MGI
Ensembl
PMID:20424323 GO_REF:0000107 MGI:4459354 NCBI chrNW_004936755:307,166...312,683
Ensembl chrNW_004936755:306,313...312,683
JBrowse link
G Pln phospholamban involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:1,443,626...1,453,770
Ensembl chrNW_004936658:1,443,795...1,453,839
JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936706:1,356,690...1,369,547 JBrowse link
G Rfx2 regulatory factor X2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,463,226...3,499,841
Ensembl chrNW_004936588:3,464,374...3,499,841
JBrowse link
G Sec23ip SEC23 interacting protein acts_upstream_of_or_within ISO (MGI:5052222|PMID:21640725) MGI PMID:21640725 MGI:5052222 NCBI chrNW_004936486:9,231,610...9,275,555
Ensembl chrNW_004936486:9,231,351...9,275,778
JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,518,798...4,595,003
Ensembl chrNW_004936514:4,517,483...4,595,019
JBrowse link
G Spaca1 sperm acrosome associated 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5437786|PMID:22949614) MGI
TreeGrafter
Ensembl
PMID:22949614 GO_REF:0000107 GO_REF:0000118 MGI:5437786 NCBI chrNW_004936510:3,876,637...3,894,655
Ensembl chrNW_004936510:3,876,647...3,894,600
JBrowse link
G Spink2 serine peptidase inhibitor Kazal type 2 involved_in ISO (MGI:6114299|PMID:28554943) UniProt PMID:28554943 MGI:6114299 NCBI chrNW_004936482:18,965,186...18,970,189 JBrowse link
G Sppl2c signal peptide peptidase like 2C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:2,340,302...2,342,380
Ensembl chrNW_004936541:2,340,302...2,343,247
JBrowse link
G Tbc1d20 TBC1 domain family member 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5551670|PMID:24239381) MGI
Ensembl
PMID:24239381 GO_REF:0000107 MGI:5551670 NCBI chrNW_004936485:18,034,776...18,055,741
Ensembl chrNW_004936485:18,034,732...18,055,767
JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2159505|PMID:11861477) MGI
Ensembl
PMID:11861477 GO_REF:0000107 MGI:2159505 NCBI chrNW_004936560:1,797,791...1,830,199
Ensembl chrNW_004936560:1,797,333...1,830,188
JBrowse link
G Tmf1 TATA element modulatory factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849617|PMID:20691678) Ensembl
MGI
PMID:20691678 GO_REF:0000107 MGI:4849617 NCBI chrNW_004936603:1,577,519...1,602,022
Ensembl chrNW_004936603:1,577,486...1,602,250
JBrowse link
G Tmprss12 transmembrane serine protease 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:8,438,636...8,465,094
Ensembl chrNW_004936512:8,438,636...8,465,094
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:43,281,905...43,952,523
Ensembl chrNW_004936470:43,281,469...43,951,805
JBrowse link
G Zpbp zona pellucida binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3761850|PMID:17664285) MGI
TreeGrafter
PMID:17664285 GO_REF:0000118 MGI:3761850 NCBI chrNW_004936686:1,742,290...1,842,998
Ensembl chrNW_004936686:1,744,144...1,841,800
JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3761850|PMID:17664285) MGI
TreeGrafter
Ensembl
PMID:17664285 GO_REF:0000107 GO_REF:0000118 MGI:3761850 NCBI chrNW_004936490:15,029,447...15,038,046
Ensembl chrNW_004936490:15,029,562...15,037,756
JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714080|PMID:17317769) MGI
Ensembl
PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
adrenal cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:3790398|PMID:17537799) UniProt PMID:17537799 MGI:3790398 NCBI chrNW_004936533:5,411,949...5,459,693
Ensembl chrNW_004936533:5,411,848...5,459,693
JBrowse link
amelogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin X-linked involved_in ISO (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chrNW_004936470:1,169,906...1,174,166
Ensembl chrNW_004936470:1,169,906...1,179,604
JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,267,224...3,267,841
Ensembl chrNW_004936567:3,267,224...3,267,829
JBrowse link
G Atf2 activating transcription factor 2 ISO RGD PMID:15218628 RGD:10053659 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
G Cftr CF transmembrane conductance regulator involved_in ISO (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Csf3r colony stimulating factor 3 receptor ISO RGD PMID:10206335 RGD:5134351 NCBI chrNW_004936474:18,877,036...18,887,574
Ensembl chrNW_004936474:18,877,375...18,887,530
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:5912858|PMID:25027178) MGI PMID:25027178 MGI:5912858 NCBI chrNW_004936905:458,062...463,359
Ensembl chrNW_004936905:458,298...463,346
JBrowse link
G Enam enamelin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3796449|PMID:18252720), (MGI:5647983|PMID:24603688)
(MGI:3530197|PMID:15649948)
(MGI:5634640|PMID:22813216)
MGI
TreeGrafter
PMID:15649948 PMID:18252720 PMID:22813216 PMID:24603688 GO_REF:0000118 MGI:3530197 MGI:3796449 MGI:5634640 MGI:5647983 NCBI chrNW_004936598:4,118,031...4,132,342
Ensembl chrNW_004936598:4,118,579...4,132,692
JBrowse link
G Klk4 kallikrein related peptidase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4354666|PMID:19578120), (MGI:5008529|PMID:21454549), (MGI:5502300|PMID:22243248) MGI
Ensembl
PMID:19578120 PMID:21454549 PMID:22243248 GO_REF:0000107 MGI:4354666 MGI:5008529 MGI:5502300 NCBI chrNW_004936889:583,259...586,412
Ensembl chrNW_004936889:583,302...586,412
JBrowse link
G Klk5 kallikrein related peptidase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936889:609,807...616,777
Ensembl chrNW_004936889:610,172...617,088
JBrowse link
G Mmp20 matrix metallopeptidase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522683|PMID:15557396), (MGI:5008529|PMID:21454549), (MGI:5502300|PMID:22243248) MGI
TreeGrafter
Ensembl
PMID:15557396 PMID:21454549 PMID:22243248 GO_REF:0000107 GO_REF:0000118 MGI:3522683 MGI:5008529 MGI:5502300 NCBI chrNW_004936551:5,310,426...5,352,883
Ensembl chrNW_004936551:5,310,426...5,352,883
JBrowse link
G Perp p53 apoptosis effector related to PMP22 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5317035|PMID:21285247) MGI
Ensembl
PMID:21285247 GO_REF:0000107 MGI:5317035 NCBI chrNW_004936560:5,285,071...5,301,253
Ensembl chrNW_004936560:5,284,612...5,301,478
JBrowse link
G Relt RELT TNF receptor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:2,577,389...2,596,690
Ensembl chrNW_004936498:2,589,291...2,595,207
JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:515,546...639,699
Ensembl chrNW_004936733:515,510...639,705
JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chrNW_004936527:6,485,566...6,499,901
Ensembl chrNW_004936527:6,485,511...6,499,924
JBrowse link
angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936525:1,559,575...1,570,679 JBrowse link
G Actg1 actin gamma 1 acts_upstream_of_or_within_positive_effect ISO (PMID:25705373) ARUK-UCL PMID:25705373 NCBI chrNW_004936594:5,170,711...5,173,251
Ensembl chrNW_004936594:5,170,711...5,173,247
JBrowse link
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354528|PMID:10716993)
(MGI:1926692|PMID:11062473)
MGI
TreeGrafter
Ensembl
PMID:10716993 PMID:11062473 GO_REF:0000107 GO_REF:0000118 MGI:1354528 MGI:1926692 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,389,925...19,403,577
Ensembl chrNW_004936486:19,391,324...19,402,332
JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4949015|PMID:21421844) MGI
Ensembl
PMID:21421844 GO_REF:0000107 MGI:4949015 NCBI chrNW_004936710:1,258,088...1,296,346
Ensembl chrNW_004936710:1,257,931...1,298,885
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,653,233...9,683,258
Ensembl chrNW_004936475:9,671,868...9,681,988
JBrowse link
G Adm2 adrenomedullin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:360,845...362,499
Ensembl chrNW_004936629:360,305...362,846
JBrowse link
G Adra2b adrenoceptor alpha 2B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2181858|PMID:12068299) MGI
Ensembl
PMID:12068299 GO_REF:0000107 MGI:2181858 NCBI chrNW_004936744:249,673...253,040
Ensembl chrNW_004936744:251,467...252,816
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Amot angiomotin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:2,594,190...2,661,307
Ensembl chrNW_004936499:2,594,239...2,661,359
JBrowse link
G Amotl1 angiomotin like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936674:163,889...285,523
Ensembl chrNW_004936674:156,552...223,685
JBrowse link
G Amotl2 angiomotin like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:7,454,778...7,471,660
Ensembl chrNW_004936529:7,454,763...7,471,718
JBrowse link
G Ang angiogenin involved_in
acts_upstream_of_or_within
ISO (PMID:17125737), (PMID:2479414)
(PMID:8448182)
UniProt
MGI
PMID:2479414 PMID:8448182 PMID:17125737 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G Angpt1 angiopoietin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3805145|PMID:18505784)
(MGI:1351100|PMID:10617467)
MGI
TreeGrafter
UniProt
Ensembl
PMID:10617467 PMID:18505784 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 MGI:1351100 MGI:3805145 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190
JBrowse link
G Angpt2 angiopoietin 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3629544|PMID:16778080) RGD
UniProt
Ensembl
MGI
PMID:16439712 PMID:16778080 GO_REF:0000043 GO_REF:0000107 MGI:3629544 RGD:2314218 NCBI chrNW_004936615:4,472,261...4,524,537
Ensembl chrNW_004936615:4,472,247...4,524,556
JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3027337|PMID:14702107) MGI
Ensembl
PMID:14702107 GO_REF:0000107 MGI:3027337 NCBI chrNW_004936471:21,274,112...21,329,286
Ensembl chrNW_004936471:21,274,027...21,329,503
JBrowse link
G Apold1 apolipoprotein L domain containing 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:15102925 GO_REF:0000118 RGD:1303988 NCBI chrNW_004936587:4,512,440...4,517,183
Ensembl chrNW_004936587:4,512,368...4,517,309
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399) UniProt PMID:17510399 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3039210|PMID:15070745) MGI
Ensembl
PMID:15070745 GO_REF:0000107 MGI:3039210 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3531500|PMID:14745002) MGI
Ensembl
PMID:14745002 GO_REF:0000107 MGI:3531500 NCBI chrNW_004936585:2,650,868...2,682,152
Ensembl chrNW_004936585:2,650,872...2,682,142
JBrowse link
G Calcrl calcitonin receptor like receptor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936506:10,191,789...10,292,355
Ensembl chrNW_004936506:10,249,687...10,292,424
JBrowse link
G Cald1 caldesmon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936579:868,681...1,046,198
Ensembl chrNW_004936579:868,500...1,046,257
JBrowse link
G Casp8 caspase 8 involved_in
acts_upstream_of_or_within
ISO (MGI:6401035|PMID:31748744)
(MGI:3609631|PMID:12404118)
UniProt
MGI
PMID:12404118 PMID:31748744 MGI:3609631 MGI:6401035 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922
JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629009|PMID:12759260) MGI
Ensembl
PMID:12759260 GO_REF:0000107 MGI:3629009 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6112839|PMID:29115376) MGI
Ensembl
PMID:29115376 GO_REF:0000107 MGI:6112839 NCBI chrNW_004936492:180,135...195,599
Ensembl chrNW_004936492:178,390...195,806
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2660724|PMID:12736220)
(MGI:1333654|PMID:10082563), (MGI:1342849|PMID:10446209)
MGI
Ensembl
PMID:10082563 PMID:10446209 PMID:12736220 GO_REF:0000107 MGI:1333654 MGI:1342849 MGI:2660724 NCBI chrNW_004936560:42,561...45,748
Ensembl chrNW_004936560:42,537...45,807
JBrowse link
G Ccn3 cellular communication network factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:27,178,439...27,185,554
Ensembl chrNW_004936470:27,178,621...27,185,564
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936483:15,963,863...15,967,458
Ensembl chrNW_004936483:15,960,036...15,968,094
JBrowse link
G Clic4 chloride intracellular channel 4 acts_upstream_of_or_within ISO (MGI:3837628|PMID:19197003) MGI PMID:19197003 MGI:3837628 NCBI chrNW_004936474:9,664,872...9,711,036 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046127|PMID:15188432)
(MGI:2177972|PMID:11927538)
MGI
TreeGrafter
PMID:11927538 PMID:15188432 GO_REF:0000118 MGI:2177972 MGI:3046127 NCBI chrNW_004936778:847,473...943,038 JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936762:66,636...69,694
Ensembl chrNW_004936762:66,636...69,373
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3576395|PMID:15613470)
(MGI:3718936|PMID:17613256)
MGI PMID:15613470 PMID:17613256 MGI:3576395 MGI:3718936 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Dll4 delta like canonical Notch ligand 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509072|PMID:23918385)
(MGI:3056004|PMID:15466160)
MGI
Ensembl
PMID:15466160 PMID:23918385 GO_REF:0000107 MGI:3056004 MGI:5509072 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5433472|PMID:20724702) MGI PMID:20724702 MGI:5433472 NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519
JBrowse link
G Edn2 endothelin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:23,061,219...23,064,525
Ensembl chrNW_004936474:23,060,905...23,064,566
JBrowse link
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Egf epidermal growth factor involved_in ISO (PMID:15611079) HGNC-UCL PMID:15611079 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:413,602...454,443
Ensembl chrNW_004936712:414,446...454,449
JBrowse link
G Elk3 ETS transcription factor ELK3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675762|PMID:12975317) MGI
Ensembl
PMID:12975317 GO_REF:0000107 MGI:2675762 NCBI chrNW_004936507:12,244,163...12,307,621
Ensembl chrNW_004936507:12,244,163...12,307,623
JBrowse link
G Emcn endomucin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:2,548,042...2,653,649
Ensembl chrNW_004936520:2,547,963...2,653,861
JBrowse link
G Eng endoglin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2674189|PMID:12941632)
(MGI:2155227|PMID:10625534)
MGI
Ensembl
PMID:10625534 PMID:12941632 GO_REF:0000107 MGI:2155227 MGI:2674189 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Enpep glutamyl aminopeptidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3032824|PMID:14998491) MGI
Ensembl
PMID:14998491 GO_REF:0000107 MGI:3032824 NCBI chrNW_004936563:1,585,450...1,665,663
Ensembl chrNW_004936563:1,585,471...1,665,677
JBrowse link
G Epas1 endothelial PAS domain protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588546|PMID:15851592)
(MGI:3530393|PMID:15728559)
(MGI:2181852|PMID:12053176)
MGI
Ensembl
PMID:12053176 PMID:15728559 PMID:15851592 GO_REF:0000107 MGI:2181852 MGI:3530393 MGI:3588546 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856
JBrowse link
G Epgn epithelial mitogen involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,389,129...1,396,508
Ensembl chrNW_004936598:1,389,100...1,396,514
JBrowse link
G Ephb1 EPH receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942
JBrowse link
G Ephb2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106
JBrowse link
G Ephb3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142
JBrowse link
G Ephb4 EPH receptor B4 involved_in ISO (MGI:1345938|PMID:10518221) UniProt PMID:10518221 MGI:1345938 NCBI chrNW_004936543:794,837...811,637
Ensembl chrNW_004936543:794,725...811,637
JBrowse link
G Esm1 endothelial cell specific molecule 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:12,750,732...12,758,262
Ensembl chrNW_004936480:12,750,731...12,758,286
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO RGD PMID:12565793 RGD:727503 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgf18 fibroblast growth factor 18 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703411|PMID:17014841) MGI
Ensembl
PMID:17014841 GO_REF:0000107 MGI:3703411 NCBI chrNW_004936609:3,677,661...3,706,511
Ensembl chrNW_004936609:3,677,237...3,706,517
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629544|PMID:16778080), (MGI:3716021|PMID:17544391) MGI
Ensembl
PMID:16778080 PMID:17544391 GO_REF:0000107 MGI:3629544 MGI:3716021 NCBI chrNW_004936720:282,291...316,629
Ensembl chrNW_004936720:279,521...316,674
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629544|PMID:16778080) MGI
Ensembl
PMID:16778080 GO_REF:0000107 MGI:3629544 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:3629544|PMID:16778080) MGI PMID:16778080 MGI:3629544 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Flna filamin A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,097,288...1,123,206
Ensembl chrNW_004936809:1,097,294...1,123,201
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3045573|PMID:14982871) MGI
UniProt
PMID:14982871 GO_REF:0000043 MGI:3045573 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Flt4 fms related receptor tyrosine kinase 4 involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936739:240,572...281,925
Ensembl chrNW_004936739:236,510...281,729
JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5824951|PMID:27823583) MGI
Ensembl
PMID:27823583 GO_REF:0000107 MGI:5824951 NCBI chrNW_004936498:14,657,641...14,666,853
Ensembl chrNW_004936498:14,662,659...14,666,883
JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1329850|PMID:11092808) MGI
Ensembl
PMID:11092808 GO_REF:0000107 MGI:1329850 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560
JBrowse link
G Fzd8 frizzled class receptor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3829282|PMID:19129494) MGI
Ensembl
PMID:19129494 GO_REF:0000107 MGI:3829282 NCBI chrNW_004936574:3,900,534...3,907,513
Ensembl chrNW_004936574:3,904,532...3,906,625
JBrowse link
G Gab1 GRB2 associated binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:4,934,743...5,048,698
Ensembl chrNW_004936535:4,932,261...5,048,693
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:86206|PMID:9043071) MGI
Ensembl
PMID:9043071 GO_REF:0000107 MGI:86206 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gja5 gap junction protein alpha 5 involved_in ISO (PMID:11866539) UniProt PMID:11866539 NCBI chrNW_004936867:269,477...279,549 JBrowse link
G Glul glutamate-ammonia ligase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936481:7,293,301...7,301,416
Ensembl chrNW_004936481:7,293,091...7,306,202
JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331738|PMID:8999798) MGI
Ensembl
PMID:8999798 GO_REF:0000107 MGI:1331738 NCBI chrNW_004936541:7,583,911...7,623,485
Ensembl chrNW_004936541:7,583,216...7,623,375
JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:4,459,213...4,462,285
Ensembl chrNW_004936630:4,461,085...4,462,167
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3805145|PMID:18505784) MGI
Ensembl
PMID:18505784 GO_REF:0000107 MGI:3805145 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3040527|PMID:15073150) MGI
Ensembl
PMID:15073150 GO_REF:0000107 MGI:3040527 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175
JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3607736|PMID:14659802)
(MGI:3039988|PMID:15073147)
MGI
Ensembl
PMID:14659802 PMID:15073147 GO_REF:0000107 MGI:3039988 MGI:3607736 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:12593860 RGD:1598394 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Hoxa3 homeobox A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:3,735,509...3,767,899
Ensembl chrNW_004936478:3,735,505...3,767,899
JBrowse link
G Hoxa7 homeobox A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:3,782,476...3,784,361
Ensembl chrNW_004936478:3,782,482...3,784,361
JBrowse link
G Hoxb13 homeobox B13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,688,572...12,690,908
Ensembl chrNW_004936490:12,688,559...12,690,908
JBrowse link
G Hoxb3 homeobox B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,834,240...12,836,812
Ensembl chrNW_004936490:12,834,240...12,836,398
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3715036|PMID:17405882) MGI
Ensembl
PMID:17405882 GO_REF:0000107 MGI:3715036 NCBI chrNW_004936469:43,039,494...43,086,041
Ensembl chrNW_004936469:43,039,488...43,087,768
JBrowse link
G Htatip2 HIV-1 Tat interactive protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936654:1,315,921...1,332,926
Ensembl chrNW_004936654:1,315,862...1,333,005
JBrowse link
G Il18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189
JBrowse link
G Itga2b integrin subunit alpha 2b involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:813,815...828,826
Ensembl chrNW_004936541:814,171...828,291
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:11,588,818...11,612,580
Ensembl chrNW_004936512:11,588,645...11,612,669
JBrowse link
G Itgav integrin subunit alpha V involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:12926533 GO_REF:0000107 GO_REF:0000118 RGD:1582460 NCBI chrNW_004936506:10,750,116...10,839,018
Ensembl chrNW_004936506:10,750,101...10,839,303
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936684:1,689,594...1,762,066
Ensembl chrNW_004936684:1,692,089...1,762,087
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO VEGF-induced corneal neovascularization
(MGI:3654789|PMID:16847049)
RGD
MGI
PMID:15126605 PMID:16847049 MGI:3654789 RGD:2290550 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 acts_upstream_of_or_within ISO (MGI:5691617|PMID:25401743) MGI PMID:25401743 MGI:5691617 NCBI chrNW_004936769:1,171,725...1,197,497
Ensembl chrNW_004936769:1,171,707...1,197,537
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2183884|PMID:12101409) MGI
Ensembl
PMID:12101409 GO_REF:0000107 MGI:2183884 NCBI chrNW_004936511:7,806,714...7,824,833
Ensembl chrNW_004936511:7,806,708...7,824,992
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO (MGI:3702795|PMID:16943282) MGI PMID:16943282 MGI:3702795 NCBI chrNW_004936545:3,385,821...3,453,861
Ensembl chrNW_004936545:3,385,062...3,454,243
JBrowse link
G Lep leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G Lepr leptin receptor involved_in ISO
IEA
RGD
Ensembl
PMID:12393625 GO_REF:0000107 RGD:729241 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444
JBrowse link
G LOC101955809 vascular endothelial growth factor receptor kdr-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936635:4,024,882...4,313,912 JBrowse link
G LOC101966519 atypical chemokine receptor 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004941839:2,839...3,897 JBrowse link
G LOC101970101 cytochrome P450 1B1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3829820|PMID:19005183) MGI
Ensembl
PMID:19005183 GO_REF:0000107 MGI:3829820 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (MGI:3621089|PMID:16556914) MGI PMID:16556914 MGI:3621089 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155237|PMID:10973481) MGI
Ensembl
PMID:10973481 GO_REF:0000107 MGI:2155237 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Mcam melanoma cell adhesion molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23878390) MGI
Ensembl
PMID:23878390 GO_REF:0000107 NCBI chrNW_004936542:4,235,914...4,244,981
Ensembl chrNW_004936542:4,237,010...4,244,462
JBrowse link
G Med1 mediator complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802
JBrowse link
G Meis1 Meis homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3028436|PMID:14713950) MGI
TreeGrafter
Ensembl
PMID:14713950 GO_REF:0000107 GO_REF:0000118 MGI:3028436 NCBI chrNW_004936491:11,079,574...11,216,451
Ensembl chrNW_004936491:11,079,455...11,217,388
JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3604838|PMID:16116430) MGI
Ensembl
PMID:16116430 GO_REF:0000107 MGI:3604838 NCBI chrNW_004936546:2,239,442...2,304,099
Ensembl chrNW_004936546:2,239,442...2,304,099
JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:2,830,286...2,847,785
Ensembl chrNW_004936504:2,830,236...2,847,847
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO RGD PMID:14766216 RGD:1582561 NCBI chrNW_004936722:1,447,189...1,457,632
Ensembl chrNW_004936722:1,447,335...1,457,611
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:12234794 RGD:625663 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
JBrowse link
G Myh9 myosin heavy chain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G Ndnf neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:593,848...624,974
Ensembl chrNW_004936662:594,331...624,980
JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5824951|PMID:27823583) MGI
Ensembl
PMID:27823583 GO_REF:0000107 MGI:5824951 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:3629251|PMID:16648142) MGI
Ensembl
PMID:16648142 GO_REF:0000107 MGI:3629251 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Nos3 nitric oxide synthase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3580728|PMID:15016731) MGI
Ensembl
PMID:15016731 GO_REF:0000107 MGI:3580728 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534
JBrowse link
G Notch1 notch receptor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Nox1 NADPH oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936584:6,023,960...6,040,041
Ensembl chrNW_004936584:6,024,008...6,039,866
JBrowse link
G Nox5 NADPH oxidase 5 involved_in ISO (PMID:17275676) UniProt PMID:17275676 NCBI chrNW_004936471:28,777,926...28,838,700 JBrowse link
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,092,675...5,099,344
Ensembl chrNW_004936525:5,092,635...5,099,331
JBrowse link
G Npr3 natriuretic peptide receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:8,093,111...8,158,862
Ensembl chrNW_004936518:8,093,561...8,158,868
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:3615102|PMID:16424942) MGI
Ensembl
PMID:16424942 GO_REF:0000107 MGI:3615102 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:1,167,055...1,238,241
Ensembl chrNW_004936653:1,169,177...1,238,140
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3505797|PMID:15376331)
(MGI:3505728|PMID:12852851)
MGI
UniProt
InterPro
Ensembl
PMID:12852851 PMID:15376331 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:3505728 MGI:3505797 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936631:2,106,378...2,222,082
Ensembl chrNW_004936631:2,106,453...2,222,088
JBrowse link
G Optc opticin acts_upstream_of
involved_in
ISO
IEA
(MGI:5462009|PMID:22159013) MGI
Ensembl
PMID:22159013 GO_REF:0000107 MGI:5462009 NCBI chrNW_004936567:1,142,994...1,152,311
Ensembl chrNW_004936567:1,142,428...1,152,717
JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776202|PMID:17573777) MGI
Ensembl
PMID:17573777 GO_REF:0000107 MGI:3776202 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540
JBrowse link
G Pank2 pantothenate kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,785,050...14,804,258
Ensembl chrNW_004936485:14,785,467...14,811,117
JBrowse link
G Pdcd10 programmed cell death 10 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936593:4,650,624...4,693,387
Ensembl chrNW_004936593:4,651,114...4,692,534
JBrowse link
G Pdcl2 phosducin like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:17,907,713...17,927,007
Ensembl chrNW_004936482:17,907,713...17,932,224
JBrowse link
G Pdcl3 phosducin like 3 involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936661:419,113...428,032 JBrowse link
G Pdgfa platelet derived growth factor subunit A acts_upstream_of_or_within ISO (MGI:2183884|PMID:12101409) MGI PMID:12101409 MGI:2183884 NCBI chrNW_004936754:808,894...828,554
Ensembl chrNW_004936754:808,213...828,613
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3723364|PMID:17563397) MGI PMID:17563397 MGI:3723364 NCBI chrNW_004936541:4,873,459...4,919,787
Ensembl chrNW_004936541:4,873,182...4,937,500
JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3653971|PMID:16847320) MGI
TreeGrafter
Ensembl
PMID:16847320 GO_REF:0000107 GO_REF:0000118 MGI:3653971 NCBI chrNW_004936500:1,018,414...1,055,221
Ensembl chrNW_004936500:1,015,954...1,055,215
JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:15854129 RGD:1581926 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877
JBrowse link
G Plcd1 phospholipase C delta 1 acts_upstream_of_or_within ISO (MGI:3610693|PMID:16314520) MGI PMID:16314520 MGI:3610693 NCBI chrNW_004936473:27,364,404...27,387,337
Ensembl chrNW_004936473:27,364,389...27,387,412
JBrowse link
G Plcd3 phospholipase C delta 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610693|PMID:16314520) MGI
Ensembl
PMID:16314520 GO_REF:0000107 MGI:3610693 NCBI chrNW_004936541:1,426,590...1,446,286
Ensembl chrNW_004936541:1,426,580...1,446,286
JBrowse link
G Plxnd1 plexin D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:848,130...882,195
Ensembl chrNW_004936602:848,140...881,873
JBrowse link
G Pnpla6 patatin like phospholipase domain containing 6 acts_upstream_of_or_within ISO (MGI:3027410|PMID:14749382) MGI PMID:14749382 MGI:3027410 NCBI chrNW_004936588:4,608,856...4,632,198
Ensembl chrNW_004936588:4,608,963...4,632,183
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2660984|PMID:12697902) MGI
Ensembl
PMID:12697902 GO_REF:0000107 MGI:2660984 NCBI chrNW_004936485:19,111,704...19,137,689
Ensembl chrNW_004936485:19,111,675...19,137,611
JBrowse link
G Prkx protein kinase cAMP-dependent X-linked catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936644:2,407,142...2,430,788
Ensembl chrNW_004936644:2,406,926...2,430,815
JBrowse link
G Prok2 prokineticin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:3,299,736...3,419,539
Ensembl chrNW_004936603:3,299,736...3,310,011
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (MGI:3588627|PMID:16107612) MGI PMID:16107612 MGI:3588627 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:21273371 RGD:5135049 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583385|PMID:15967814) MGI
UniProt
PMID:15967814 GO_REF:0000043 MGI:3583385 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO
IEA
RGD
UniProt
PMID:11739395 GO_REF:0000043 RGD:70597 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810
JBrowse link
G Ptprb protein tyrosine phosphatase receptor type B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936545:8,150,766...8,235,674
Ensembl chrNW_004936545:8,147,291...8,235,715
JBrowse link
G Pxdn peroxidasin acts_upstream_of
involved_in
ISO
IEA
(PMID:29982533) UniProt
Ensembl
PMID:29982533 GO_REF:0000107 NCBI chrNW_004936532:462,507...543,549
Ensembl chrNW_004936532:462,429...543,555
JBrowse link
G Ramp1 receptor activity modifying protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:503,119...540,159
Ensembl chrNW_004936525:503,070...540,281
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:17,479,899...17,481,788
Ensembl chrNW_004936490:17,479,650...17,482,716
JBrowse link
G Rasip1 Ras interacting protein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:2,743,568...2,754,618
Ensembl chrNW_004936664:2,743,564...2,754,395
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056004|PMID:15466160) MGI
Ensembl
PMID:15466160 GO_REF:0000107 MGI:3056004 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797
JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (MGI:5751632|PMID:26126547)
(PMID:26126547), (PMID:26278786)
UniProt PMID:26126547 PMID:26278786 MGI:5751632 NCBI chrNW_004936594:4,241,006...4,331,841
Ensembl chrNW_004936594:4,241,396...4,331,868
JBrowse link
G Robo4 roundabout guidance receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936743:1,321,816...1,336,682
Ensembl chrNW_004936743:1,318,718...1,336,689
JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5606157|PMID:18842812) MGI
Ensembl
PMID:18842812 GO_REF:0000107 MGI:5606157 NCBI chrNW_004936639:2,475,710...2,552,725
Ensembl chrNW_004936639:2,475,710...2,552,725
JBrowse link
G Rtl1 retrotransposon Gag like 1 acts_upstream_of_or_within ISO (MGI:6709275|PMID:28111885) MGI PMID:28111885 MGI:6709275 NCBI chrNW_004936604:4,648,928...4,655,418 JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within ISO (MGI:3042512|PMID:15034570) MGI PMID:15034570 MGI:3042512 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055628|PMID:15371328) MGI
TreeGrafter
Ensembl
PMID:15371328 GO_REF:0000107 GO_REF:0000118 MGI:3055628 NCBI chrNW_004936748:1,244,962...1,250,093
Ensembl chrNW_004936748:1,245,538...1,250,093
JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:756,761...759,979
Ensembl chrNW_004936624:756,712...759,983
JBrowse link
G Scg2 secretogranin II involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:5,367,270...5,372,627
Ensembl chrNW_004936569:5,367,206...5,373,017
JBrowse link
G Serpine1 serpin family E member 1 involved_in
acts_upstream_of
IEA
ISO
(MGI:5634654|PMID:21119013) Ensembl
MGI
PMID:21119013 GO_REF:0000107 MGI:5634654 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4431136|PMID:20133625) MGI
Ensembl
PMID:20133625 GO_REF:0000107 MGI:4431136 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373
JBrowse link
G Shc1 SHC adaptor protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1858547|PMID:10809671) MGI
Ensembl
PMID:10809671 GO_REF:0000107 MGI:1858547 NCBI chrNW_004936580:4,511,560...4,522,003
Ensembl chrNW_004936580:4,512,680...4,519,715
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3701403|PMID:17187775)
(MGI:3629544|PMID:16778080)
MGI
Ensembl
PMID:16778080 PMID:17187775 GO_REF:0000107 MGI:3629544 MGI:3701403 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Slc31a1 solute carrier family 31 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:333,461...364,737
Ensembl chrNW_004936559:331,917...364,852
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3664528|PMID:16895970) MGI
TreeGrafter
Ensembl
PMID:16895970 GO_REF:0000107 GO_REF:0000118 MGI:3664528 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3664528|PMID:16895970) MGI
TreeGrafter
Ensembl
PMID:16895970 GO_REF:0000107 GO_REF:0000118 MGI:3664528 NCBI chrNW_004936514:11,231,327...11,233,292
Ensembl chrNW_004936514:11,231,305...11,233,337
JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (MGI:5009362|PMID:19906640) BHF-UCL PMID:19906640 MGI:5009362 NCBI chrNW_004936479:18,541,167...18,675,039
Ensembl chrNW_004936479:18,541,248...18,670,914
JBrowse link
G Srpx2 sushi repeat containing protein X-linked 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936584:5,855,818...5,879,478
Ensembl chrNW_004936584:5,855,818...5,880,259
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1197163|PMID:9472016)
(MGI:3580924|PMID:15677556)
MGI
Ensembl
PMID:9472016 PMID:15677556 GO_REF:0000107 MGI:1197163 MGI:3580924 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:2178739|PMID:11971873) MGI PMID:11971873 MGI:2178739 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525
JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2660720|PMID:12736212) MGI
TreeGrafter
Ensembl
PMID:12736212 GO_REF:0000107 GO_REF:0000118 MGI:2660720 NCBI chrNW_004936490:2,823,531...2,853,282
Ensembl chrNW_004936490:2,827,416...2,852,917
JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1315113|PMID:9846489) MGI
TreeGrafter
PMID:9846489 GO_REF:0000118 MGI:1315113 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tgfa transforming growth factor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3032824|PMID:14998491) MGI
Ensembl
PMID:14998491 GO_REF:0000107 MGI:3032824 NCBI chrNW_004936491:14,659,089...14,758,614
Ensembl chrNW_004936491:14,657,100...14,758,848
JBrowse link
G Tgfbi transforming growth factor beta induced involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:3,128,007...3,161,885
Ensembl chrNW_004936597:3,127,795...3,162,242
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1933434|PMID:11285230) MGI
Ensembl
PMID:11285230 GO_REF:0000107 MGI:1933434 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,323,905...4,329,940
Ensembl chrNW_004936542:4,323,408...4,330,077
JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432418|PMID:22783020) MGI
Ensembl
PMID:22783020 GO_REF:0000107 MGI:5432418 NCBI chrNW_004936490:6,958,064...6,963,888
Ensembl chrNW_004936490:6,958,096...6,964,536
JBrowse link
G Tmem215 transmembrane protein 215 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6507628|PMID:30370660) MGI
Ensembl
PMID:30370660 GO_REF:0000107 MGI:6507628 NCBI chrNW_004936524:1,395,860...1,402,013
Ensembl chrNW_004936524:1,400,526...1,401,233
JBrowse link
G Tspan12 tetraspanin 12 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936605:4,265,475...4,338,518
Ensembl chrNW_004936605:4,265,316...4,338,526
JBrowse link
G Ubp1 upstream binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3052280|PMID:15282311) MGI
Ensembl
PMID:15282311 GO_REF:0000107 MGI:3052280 NCBI chrNW_004936473:23,658,243...23,711,768
Ensembl chrNW_004936473:23,657,262...23,712,011
JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15467828) MGI
Ensembl
PMID:15467828 GO_REF:0000107 NCBI chrNW_004936488:5,675,788...5,696,198
Ensembl chrNW_004936488:5,675,782...5,696,222
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3789854|PMID:17625068)
(MGI:3027334|PMID:14722611)
(MGI:3039988|PMID:15073147)
(MGI:2681060|PMID:12890722)
(MGI:3629544|PMID:16778080)
(MGI:1351100|PMID:10617467), (MGI:2675762|PMID:12975317), (MGI:3032824|PMID:14998491), (MGI:3758404|PMID:17626017)
RGD
Ensembl
MGI
UniProt
PMID:10617467 PMID:12890722 PMID:12975317 PMID:14722611 PMID:14998491 More... GO_REF:0000043 GO_REF:0000107 MGI:1351100 MGI:2675762 MGI:2681060 MGI:3027334 MGI:3032824 MGI:3039988 MGI:3629544 MGI:3758404 MGI:3789854 RGD:1580552 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vegfb vascular endothelial growth factor B ISO RGD PMID:12230324 RGD:1580574 NCBI chrNW_004936599:4,963,161...4,966,258
Ensembl chrNW_004936599:4,962,222...4,966,264
JBrowse link
G Vegfc vascular endothelial growth factor C ISO RGD PMID:12706123 RGD:1580593 NCBI chrNW_004936516:7,217,543...7,332,531
Ensembl chrNW_004936516:7,217,543...7,332,559
JBrowse link
G Vezf1 vascular endothelial zinc finger 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581991|PMID:15882861) MGI
Ensembl
PMID:15882861 GO_REF:0000107 MGI:3581991 NCBI chrNW_004936490:5,074,832...5,090,019
Ensembl chrNW_004936490:5,077,732...5,088,967
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3619780|PMID:16537898) MGI
Ensembl
PMID:16537898 GO_REF:0000107 MGI:3619780 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5921629|PMID:28675177) MGI
Ensembl
PMID:28675177 GO_REF:0000107 MGI:5921629 NCBI chrNW_004936497:2,126,064...2,161,451
Ensembl chrNW_004936497:2,126,061...2,161,485
JBrowse link
G Wasf2 WASP family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2668788|PMID:12879075) MGI
Ensembl
PMID:12879075 GO_REF:0000107 MGI:2668788 NCBI chrNW_004936474:11,711,582...11,736,154
Ensembl chrNW_004936474:11,711,582...11,735,897
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3829282|PMID:19129494) MGI
Ensembl
PMID:19129494 GO_REF:0000107 MGI:3829282 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (MGI:3829282|PMID:19129494) MGI PMID:19129494 MGI:3829282 NCBI chrNW_004936629:3,869,976...3,907,932
Ensembl chrNW_004936629:3,869,523...3,909,808
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:5575452|PMID:23529610) UniProt PMID:23529610 MGI:5575452 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta acts_upstream_of_or_within
involved_in
ISO (MGI:6109167|PMID:29118970) MGI PMID:29118970 MGI:6109167 NCBI chrNW_004936470:42,444,671...42,470,548
Ensembl chrNW_004936470:42,445,412...42,470,900
JBrowse link
angiogenesis involved in coronary vascular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101968921 angiotensin-converting enzyme ISO RGD PMID:22123369 RGD:6893472 NCBI chrNW_004936541:4,157,847...4,178,156
Ensembl chrNW_004936541:4,157,393...4,178,177
JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:11397779 RGD:8655634 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
angiogenesis involved in wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3038538|PMID:15039218) MGI
Ensembl
PMID:15039218 GO_REF:0000107 MGI:3038538 NCBI chrNW_004936524:1,659,791...1,713,971
Ensembl chrNW_004936524:1,659,608...1,714,102
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3772530|PMID:18097059) MGI
Ensembl
PMID:18097059 GO_REF:0000107 MGI:3772530 NCBI chrNW_004936475:9,443,851...9,454,715
Ensembl chrNW_004936475:9,443,733...9,455,062
JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:21192954 RGD:11541061 NCBI chrNW_004936529:1,099,510...1,171,587
Ensembl chrNW_004936529:1,099,647...1,173,124
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:9600079 RGD:2313680 NCBI chrNW_004936572:3,728,971...3,795,612
Ensembl chrNW_004936572:3,730,327...3,795,625
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3699048|PMID:17145776) MGI
Ensembl
PMID:17145776 GO_REF:0000107 MGI:3699048 NCBI chrNW_004936706:1,999,218...2,001,176
Ensembl chrNW_004936706:1,999,340...2,000,428
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3698597|PMID:16373599) MGI
Ensembl
PMID:16373599 GO_REF:0000107 MGI:3698597 NCBI chrNW_004936529:997,943...999,123
Ensembl chrNW_004936529:998,150...998,987
JBrowse link
G Hpse heparanase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936738:1,308,350...1,341,421
Ensembl chrNW_004936738:1,308,345...1,343,145
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5604041|PMID:25139353) MGI
Ensembl
PMID:25139353 GO_REF:0000107 MGI:5604041 NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848
JBrowse link
G Prcp prolylcarboxypeptidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5515692|PMID:23744584) MGI
TreeGrafter
Ensembl
PMID:23744584 GO_REF:0000107 GO_REF:0000118 MGI:5515692 NCBI chrNW_004936498:11,037,294...11,109,657
Ensembl chrNW_004936498:11,036,916...11,109,788
JBrowse link
G Stard13 StAR related lipid transfer domain containing 13 NOT|acts_upstream_of_or_within ISO (MGI:4887522|PMID:20208559) MGI PMID:20208559 MGI:4887522 NCBI chrNW_004936472:27,683,939...28,158,362
Ensembl chrNW_004936472:27,683,923...27,741,339
JBrowse link
animal organ formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714080|PMID:17317769) MGI
Ensembl
PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3688470|PMID:11062007) MGI
Ensembl
PMID:11062007 GO_REF:0000107 MGI:3688470 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3701716|PMID:16887115) MGI
Ensembl
PMID:16887115 GO_REF:0000107 MGI:3701716 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:74186|PMID:7635047) MGI
Ensembl
PMID:7635047 GO_REF:0000107 MGI:74186 NCBI chrNW_004936478:3,735,509...3,767,899
Ensembl chrNW_004936478:3,735,505...3,767,899
JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1343724|PMID:10449756) MGI
Ensembl
PMID:10449756 GO_REF:0000107 MGI:1343724 NCBI chrNW_004936477:13,999,045...14,001,659
Ensembl chrNW_004936477:13,999,045...14,001,659
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3037217|PMID:15013801) MGI
Ensembl
PMID:15013801 GO_REF:0000107 MGI:3037217 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Tlx1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (MGI:3621683|PMID:11356032) MGI PMID:11356032 MGI:3621683 NCBI chrNW_004936600:4,564,246...4,569,774 JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 acts_upstream_of_or_within ISO (MGI:5050793|PMID:21515572) MGI PMID:21515572 MGI:5050793 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Folr1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226
JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050793|PMID:21515572) Ensembl
MGI
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844
JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (MGI:6101898|PMID:26787558) MGI PMID:26787558 MGI:6101898 NCBI chrNW_004936619:448,304...592,981
Ensembl chrNW_004936619:448,303...593,001
JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chrNW_004936596:1,958,961...2,074,471
Ensembl chrNW_004936596:1,958,844...2,074,707
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:80520|PMID:8622765) MGI PMID:8622765 MGI:80520 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
aortic valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh11 cadherin 11 involved_in ISO (PMID:26188246) BHF-UCL PMID:26188246 NCBI chrNW_004936475:15,513,402...15,662,330
Ensembl chrNW_004936475:15,511,804...15,662,330
JBrowse link
G Rhoa ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,000,050...1,045,655
Ensembl chrNW_004936529:999,935...1,045,681
JBrowse link
atrioventricular valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO (MGI:4946551|PMID:21330551) BHF-UCL PMID:21330551 MGI:4946551 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:3703467|PMID:17259303) BHF-UCL PMID:17259303 MGI:3703467 NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
axial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:894149|PMID:9230313) MGI
Ensembl
PMID:9230313 GO_REF:0000107 MGI:894149 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873
JBrowse link
G Epha2 EPH receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934524|PMID:11287184) MGI
Ensembl
PMID:11287184 GO_REF:0000107 MGI:1934524 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861
JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2677178|PMID:14511481) MGI
Ensembl
PMID:14511481 GO_REF:0000107 MGI:2677178 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:1891551|PMID:11029008) MGI PMID:11029008 MGI:1891551 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4839483|PMID:20630950) MGI
Ensembl
PMID:20630950 GO_REF:0000107 MGI:4839483 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1891551|PMID:11029008) MGI
Ensembl
PMID:11029008 GO_REF:0000107 MGI:1891551 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423
JBrowse link
blastocyst formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin like 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936566:3,577,412...3,587,182
Ensembl chrNW_004936566:3,573,974...3,595,534
JBrowse link
G Bysl bystin like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3700849|PMID:17242206) MGI
Ensembl
PMID:17242206 GO_REF:0000107 MGI:3700849 NCBI chrNW_004936476:17,887,998...17,896,598
Ensembl chrNW_004936476:17,888,335...17,896,268
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within ISO (MGI:3757893|PMID:17784788) MGI PMID:17784788 MGI:3757893 NCBI chrNW_004936877:523,022...528,387 JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,136,099...16,147,945
Ensembl chrNW_004936483:16,136,099...16,144,635
JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936640:1,882,297...1,917,210
Ensembl chrNW_004936640:1,882,238...1,914,232
JBrowse link
G Kdm4c lysine demethylase 4C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4421125|PMID:19696013) MGI
Ensembl
PMID:19696013 GO_REF:0000107 MGI:4421125 NCBI chrNW_004936539:1,198,105...1,580,078
Ensembl chrNW_004936539:1,198,147...1,580,082
JBrowse link
G Matr3 matrin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936531:8,385,919...8,418,753
Ensembl chrNW_004936531:8,385,743...8,420,836
JBrowse link
G Mfn2 mitofusin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3587532|PMID:16083859) MGI
Ensembl
PMID:16083859 GO_REF:0000107 MGI:3587532 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936492:3,547,345...3,561,940
Ensembl chrNW_004936492:3,547,282...3,562,022
JBrowse link
G Mxi1 MAX interactor 1, dimerization protein acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) MGI PMID:27869233 MGI:5913376 NCBI chrNW_004936486:1,103,908...1,173,982
Ensembl chrNW_004936486:1,101,552...1,177,220
JBrowse link
G Nop2 NOP2 nucleolar protein acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) MGI PMID:27869233 MGI:5913376 NCBI chrNW_004936709:1,215,100...1,228,117 JBrowse link
G Pbrm1 polybromo 1 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) MGI PMID:27869233 MGI:5913376 NCBI chrNW_004936473:3,382,618...3,476,049
Ensembl chrNW_004936473:3,382,260...3,476,052
JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936489:11,289,557...11,308,136
Ensembl chrNW_004936489:11,290,008...11,308,118
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:5319591|PMID:22333836) MGI PMID:22333836 MGI:5319591 NCBI chrNW_004936637:2,225,400...2,299,307
Ensembl chrNW_004936637:2,003,209...2,333,278
JBrowse link
G Ptpn18 protein tyrosine phosphatase non-receptor type 18 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) MGI PMID:27869233 MGI:5913376 NCBI chrNW_004936469:41,104,698...41,117,753 JBrowse link
G Rpl7l1 ribosomal protein L7 like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:23211737 PMID:27869233 GO_REF:0000107 MGI:5605165 MGI:5913376 NCBI chrNW_004936476:17,022,292...17,030,534
Ensembl chrNW_004936476:17,017,950...17,030,857
JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:23211737 PMID:27869233 GO_REF:0000107 MGI:5605165 MGI:5913376 NCBI chrNW_004936718:498,841...506,972
Ensembl chrNW_004936718:496,742...507,016
JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
G Sf3b1 splicing factor 3b subunit 1 acts_upstream_of_or_within ISO (MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233) MGI PMID:23211737 PMID:27869233 MGI:5605165 MGI:5913376 NCBI chrNW_004936506:1,749,591...1,790,860
Ensembl chrNW_004936506:1,749,563...1,791,739
JBrowse link
G Sf3b6 splicing factor 3b subunit 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:23211737 PMID:27869233 GO_REF:0000107 MGI:5605165 MGI:5913376 NCBI chrNW_004936493:7,906,701...7,912,777
Ensembl chrNW_004936493:7,906,701...7,912,438
JBrowse link
G Skil SKI like proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1858539|PMID:10811619) MGI
Ensembl
PMID:10811619 GO_REF:0000107 MGI:1858539 NCBI chrNW_004936593:2,109,414...2,132,871
Ensembl chrNW_004936593:2,109,223...2,132,882
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3811945|PMID:18804437) MGI
Ensembl
PMID:18804437 GO_REF:0000107 MGI:3811945 NCBI chrNW_004936606:3,310,905...3,358,519
Ensembl chrNW_004936606:3,310,823...3,356,509
JBrowse link
G Tjp1 tight junction protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3797149|PMID:18423437) MGI
Ensembl
PMID:18423437 GO_REF:0000107 MGI:3797149 NCBI chrNW_004936483:1,814,870...2,045,802
Ensembl chrNW_004936483:1,814,894...2,030,946
JBrowse link
G Tm4sf1 transmembrane 4 L six family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chrNW_004936519:6,306,281...6,314,045
Ensembl chrNW_004936519:6,305,881...6,314,113
JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) MGI PMID:27869233 MGI:5913376 NCBI chrNW_004936798:1,190,975...1,231,732
Ensembl chrNW_004936798:1,203,418...1,230,988
JBrowse link
G Uspl1 ubiquitin specific peptidase like 1 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) MGI PMID:27869233 MGI:5913376 NCBI chrNW_004936472:25,370,381...25,409,800
Ensembl chrNW_004936472:25,374,332...25,410,343
JBrowse link
G Wdr74 WD repeat domain 74 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5287298|PMID:21799883), (MGI:5913376|PMID:27869233) MGI
Ensembl
PMID:21799883 PMID:27869233 GO_REF:0000107 MGI:5287298 MGI:5913376 NCBI chrNW_004936581:456,354...461,610
Ensembl chrNW_004936581:455,606...461,635
JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,013,231...2,022,270 JBrowse link
blood vessel endothelial cell migration involved in intussusceptive angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO (MGI:3702795|PMID:16943282) MGI PMID:16943282 MGI:3702795 NCBI chrNW_004936545:3,385,821...3,453,861
Ensembl chrNW_004936545:3,385,062...3,454,243
JBrowse link
blood vessel endothelial cell proliferation involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmper BMP binding endothelial regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:9,705,634...9,941,382
Ensembl chrNW_004936478:9,705,604...9,941,340
JBrowse link
G Epha2 EPH receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3847147|PMID:19443703) MGI
Ensembl
PMID:19443703 GO_REF:0000107 MGI:3847147 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,802,761...5,814,226
Ensembl chrNW_004936532:5,799,342...5,814,199
JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
TreeGrafter
Ensembl
PMID:19154719 GO_REF:0000107 GO_REF:0000118 MGI:3833040 NCBI chrNW_004936669:702,825...705,009
Ensembl chrNW_004936669:702,853...703,197
JBrowse link
G Sema5a semaphorin 5A involved_in ISO (MGI:5526935|PMID:19850054) UniProt PMID:19850054 MGI:5526935 NCBI chrNW_004936643:1,352,401...1,803,553
Ensembl chrNW_004936643:1,355,070...1,637,151
JBrowse link
bone trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3710444|PMID:17440987) MGI
Ensembl
PMID:17440987 GO_REF:0000107 MGI:3710444 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (MGI:5661140|PMID:22359666) MGI PMID:22359666 MGI:5661140 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Fbn2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:1,535,629...1,757,386
Ensembl chrNW_004936504:1,535,624...1,757,435
JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3710444|PMID:17440987) MGI
Ensembl
PMID:17440987 GO_REF:0000107 MGI:3710444 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1355063|PMID:10742104) MGI
Ensembl
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,099,334...5,198,279
Ensembl chrNW_004936504:5,099,470...5,198,584
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3040721|PMID:14976225) MGI
Ensembl
PMID:14976225 GO_REF:0000107 MGI:3040721 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Thbs3 thrombospondin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581317|PMID:15964815) MGI
Ensembl
PMID:15964815 GO_REF:0000107 MGI:3581317 NCBI chrNW_004936580:4,699,255...4,709,200
Ensembl chrNW_004936580:4,698,623...4,709,200
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5461755|PMID:22886301) MGI
Ensembl
PMID:22886301 GO_REF:0000107 MGI:5461755 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3574150|PMID:15728361) MGI
Ensembl
PMID:15728361 GO_REF:0000107 MGI:3574150 NCBI chrNW_004936512:6,768,240...6,774,172
Ensembl chrNW_004936512:6,768,240...6,774,172
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703113|PMID:17078885) Ensembl
MGI
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,416,043...2,543,561
Ensembl chrNW_004936472:2,416,566...2,542,814
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719)
(MGI:2675534|PMID:12975353)
MGI
Ensembl
PMID:12975353 PMID:19154719 GO_REF:0000107 MGI:2675534 MGI:3833040 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chrNW_004936617:4,224,131...4,239,080
Ensembl chrNW_004936617:4,224,131...4,238,796
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:74210|PMID:7615798) MGI
Ensembl
PMID:7615798 GO_REF:0000107 MGI:74210 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772
JBrowse link
G Ednra endothelin receptor type A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3606840|PMID:15664398) MGI
Ensembl
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Eng endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588904|PMID:15996652) MGI
Ensembl
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:3045573 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3606840|PMID:15664398) MGI
Ensembl
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588904|PMID:15996652) MGI
Ensembl
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chrNW_004936525:1,870,211...1,873,536
Ensembl chrNW_004936525:1,870,195...1,873,539
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gna13 G protein subunit alpha 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583513|PMID:15919816) Ensembl
MGI
PMID:15919816 GO_REF:0000107 MGI:3583513 NCBI chrNW_004936541:7,583,911...7,623,485
Ensembl chrNW_004936541:7,583,216...7,623,375
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3574706|PMID:15689378) MGI
Ensembl
PMID:15689378 GO_REF:0000107 MGI:3574706 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568
JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23688497) BHF-UCL
Ensembl
PMID:23688497 GO_REF:0000107 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
Ensembl
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220
JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chrNW_004936722:178,866...187,847
Ensembl chrNW_004936722:179,200...187,800
JBrowse link
G Notch4 notch receptor 4 involved_in ISO (MGI:1934537|PMID:11344305) UniProt PMID:11344305 MGI:1934537 NCBI chrNW_004936727:1,386,842...1,409,823 JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
TreeGrafter
Ensembl
PMID:19154719 GO_REF:0000107 GO_REF:0000118 MGI:3833040 NCBI chrNW_004936669:702,825...705,009
Ensembl chrNW_004936669:702,853...703,197
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3710026|PMID:17428830) MGI
Ensembl
PMID:17428830 GO_REF:0000107 MGI:3710026 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2389284|PMID:12397115) MGI
Ensembl
PMID:12397115 GO_REF:0000107 MGI:2389284 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Plxnd1 plexin D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509072|PMID:23918385)
(MGI:3050159|PMID:15239958)
MGI
Ensembl
PMID:15239958 PMID:23918385 GO_REF:0000107 MGI:3050159 MGI:5509072 NCBI chrNW_004936602:848,130...882,195
Ensembl chrNW_004936602:848,140...881,873
JBrowse link
G Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chrNW_004936491:12,623,931...12,654,463
Ensembl chrNW_004936491:12,623,349...12,654,502
Ensembl chrNW_004936491:12,623,349...12,654,502
JBrowse link
G Rbm15 RNA binding motif protein 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833189|PMID:18981216) MGI
Ensembl
PMID:18981216 GO_REF:0000107 MGI:3833189 NCBI chrNW_004936704:1,779,981...1,787,339
Ensembl chrNW_004936704:1,779,482...1,788,710
JBrowse link
G Sema3e semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936734:1,850,709...2,085,541
Ensembl chrNW_004936734:1,850,673...2,084,891
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chrNW_004936643:1,352,401...1,803,553
Ensembl chrNW_004936643:1,355,070...1,637,151
JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583396|PMID:15936751) MGI
Ensembl
PMID:15936751 GO_REF:0000107 MGI:3583396 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3811944|PMID:18804439) MGI
Ensembl
PMID:18804439 GO_REF:0000107 MGI:3811944 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412133|PMID:19786569) MGI
Ensembl
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chrNW_004936514:7,686,760...7,784,948
Ensembl chrNW_004936514:7,686,087...7,785,025
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578574|PMID:15843414) MGI
Ensembl
PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chrNW_004936478:10,887,900...10,939,510
Ensembl chrNW_004936478:10,888,045...10,939,564
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703113|PMID:17078885) MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23688497)
(MGI:3710026|PMID:17428830)
BHF-UCL
Ensembl
MGI
PMID:17428830 PMID:23688497 GO_REF:0000107 MGI:3710026 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:3848105 NCBI chrNW_004936616:484,062...584,950
Ensembl chrNW_004936616:484,045...587,891
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,709,424...24,729,246
Ensembl chrNW_004936474:24,709,424...24,729,245
JBrowse link
cardiac atrium formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
cardiac chamber formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943647|PMID:19661464) MGI
Ensembl
PMID:19661464 GO_REF:0000107 MGI:4943647 NCBI chrNW_004936478:10,887,900...10,939,510
Ensembl chrNW_004936478:10,888,045...10,939,564
JBrowse link
cardiac left ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936558:7,408,229...7,454,897
Ensembl chrNW_004936558:7,408,222...7,454,901
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:25,837,577...26,040,271
Ensembl chrNW_004936469:25,837,577...26,039,536
JBrowse link
G Nebl nebulette involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:6,658,555...6,992,643
Ensembl chrNW_004936520:6,658,920...6,987,116
JBrowse link
G Nrap nebulin related anchoring protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:4,005,064...4,075,660
Ensembl chrNW_004936486:4,005,055...4,075,615
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin alpha cardiac muscle 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87509|PMID:9114002) MGI
Ensembl
PMID:9114002 GO_REF:0000107 MGI:87509 NCBI chrNW_004936673:1,092,700...1,098,256
Ensembl chrNW_004936673:1,092,717...1,100,331
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:271,067...313,251
Ensembl chrNW_004936654:271,067...289,823
JBrowse link
G Fhod3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5436289|PMID:23213483) MGI
TreeGrafter
PMID:23213483 GO_REF:0000118 MGI:5436289 NCBI chrNW_004936517:8,614,384...9,044,894
Ensembl chrNW_004936517:8,614,867...9,044,894
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1099556|PMID:9356462) MGI PMID:9356462 MGI:1099556 NCBI chrNW_004936595:1,697,283...1,832,571
Ensembl chrNW_004936595:1,694,102...1,832,364
JBrowse link
G Myl2 myosin light chain 2 acts_upstream_of_or_within ISO (MGI:1194431|PMID:9422794) MGI PMID:9422794 MGI:1194431 NCBI chrNW_004936558:3,746,227...3,753,576
Ensembl chrNW_004936558:3,745,864...3,753,681
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chrNW_004936475:89,717...137,866
Ensembl chrNW_004936475:89,570...126,025
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513738|PMID:15569937) MGI
Ensembl
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tcap titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within
ISO (PMID:11846417), (PMID:9817758)
(MGI:3653555|PMID:16702235)
BHF-UCL
MGI
PMID:9817758 PMID:11846417 PMID:16702235 MGI:3653555 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
cardiac right ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4438134|PMID:19620969) MGI
Ensembl
PMID:19620969 GO_REF:0000107 MGI:4438134 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828346|PMID:17519332) MGI
Ensembl
PMID:17519332 GO_REF:0000107 MGI:3828346 NCBI chrNW_004936527:6,643,182...6,675,708
Ensembl chrNW_004936527:6,643,075...6,675,883
JBrowse link
cardiac ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within
involved_in
ISO (MGI:3820390|PMID:19035347)
(MGI:3830899|PMID:16680724)
MGI
UniProt
PMID:16680724 PMID:19035347 MGI:3820390 MGI:3830899 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3820390|PMID:19035347) MGI
Ensembl
PMID:19035347 GO_REF:0000107 MGI:3820390 NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046
JBrowse link
cardioblast anterior-lateral migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
cardioblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1339460|PMID:10393122) MGI
Ensembl
PMID:10393122 GO_REF:0000107 MGI:1339460 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
cardioblast migration to the midline involved in heart field formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
cell adhesion involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtn4 reticulon 4 involved_in ISO (PMID:15034570) UniProt PMID:15034570 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chrNW_004936837:827,568...838,933 JBrowse link
cell migration involved in coronary angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (MGI:2680741|PMID:14624252) UniProt PMID:14624252 MGI:2680741 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829
JBrowse link
cell migration involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:677,416...697,013
Ensembl chrNW_004936842:677,416...697,003
JBrowse link
G Eng endoglin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4368063|PMID:19703439) MGI
Ensembl
PMID:19703439 GO_REF:0000107 MGI:4368063 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:3,813,916...3,817,642
Ensembl chrNW_004936590:3,813,888...3,817,642
JBrowse link
cell migration involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:1,332,682...1,389,242
Ensembl chrNW_004936534:1,332,625...1,389,572
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Clec14a C-type lectin domain containing 14A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:12,112,163...12,115,836
Ensembl chrNW_004936494:12,114,371...12,115,787
JBrowse link
G Cripto cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chrNW_004936596:451,483...453,892 JBrowse link
G Efnb2 ephrin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:5,138,751...5,181,630
Ensembl chrNW_004936472:5,138,745...5,181,668
JBrowse link
G Egr3 early growth response 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,347,446...6,393,784
Ensembl chrNW_004936555:6,356,691...6,393,825
Ensembl chrNW_004936555:6,356,691...6,393,825
JBrowse link
G Ephb4 EPH receptor B4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:794,837...811,637
Ensembl chrNW_004936543:794,725...811,637
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:780,173...827,628
Ensembl chrNW_004936671:782,135...827,771
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3615102|PMID:16424942) MGI
Ensembl
PMID:16424942 GO_REF:0000107 MGI:3615102 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Mmrn2 multimerin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:22,609...39,974
Ensembl chrNW_004936804:22,533...39,540
JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423
JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:27,095,125...27,171,416
Ensembl chrNW_004936474:27,095,100...27,171,252
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655
JBrowse link
G Slit2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3811944|PMID:18804439) MGI
Ensembl
PMID:18804439 GO_REF:0000107 MGI:3811944 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:920,830...1,108,374
Ensembl chrNW_004936491:956,986...1,108,640
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (MGI:5823498|PMID:28063167) MGI PMID:28063167 MGI:5823498 NCBI chrNW_004936562:2,269,341...2,369,098
Ensembl chrNW_004936562:2,269,332...2,371,224
JBrowse link
G Cntn1 contactin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:8,430...291,964
Ensembl chrNW_004936607:23,150...292,013
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3771455|PMID:17952069) MGI
Ensembl
PMID:17952069 GO_REF:0000107 MGI:3771455 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Mag myelin associated glycoprotein involved_in ISO (MGI:6377996|PMID:31641127) MGI PMID:31641127 MGI:6377996 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Mios meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:2,296,713...2,331,737
Ensembl chrNW_004936585:2,296,830...2,331,601
JBrowse link
G Mobp myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chrNW_004936473:28,663,986...28,709,394
Ensembl chrNW_004936473:28,689,242...28,697,772
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:7,145,510...7,868,792
Ensembl chrNW_004936498:7,145,483...7,658,860
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1340775|PMID:10407039) MGI
Ensembl
PMID:10407039 GO_REF:0000107 MGI:1340775 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5545830|PMID:24431450) MGI
Ensembl
PMID:24431450 GO_REF:0000107 MGI:5545830 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5545830|PMID:24431450) MGI
Ensembl
PMID:24431450 GO_REF:0000107 MGI:5545830 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:1275896 NCBI chrNW_004936602:2,744,757...3,011,051
Ensembl chrNW_004936602:2,744,759...3,007,940
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:2,493,280...2,496,738
Ensembl chrNW_004936475:2,494,156...2,496,743
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:20,126...1,421,075
Ensembl chrNW_004936687:549,947...1,421,133
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769586|PMID:17984326) MGI
Ensembl
PMID:17984326 GO_REF:0000107 MGI:3769586 NCBI chrNW_004936486:19,287,468...19,341,127
Ensembl chrNW_004936486:19,287,462...19,341,145
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004936592:644,618...679,615
Ensembl chrNW_004936592:644,430...679,800
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (MGI:5436217|PMID:21800304)
(MGI:5612951|PMID:23042739)
MGI PMID:21800304 PMID:23042739 MGI:5436217 MGI:5612951 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Ophn1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) MGI PMID:10624947 MGI:1351063 NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195230|PMID:9405095) MGI
Ensembl
PMID:9405095 GO_REF:0000107 MGI:1195230 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:1,065,375...1,240,909
Ensembl chrNW_004936680:1,065,937...1,240,875
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:1275896 NCBI chrNW_004936602:2,744,757...3,011,051
Ensembl chrNW_004936602:2,744,759...3,007,940
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:71790|PMID:2473662) MGI PMID:2473662 MGI:71790 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040
JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO (MGI:3510013|PMID:10973246) MGI PMID:10973246 MGI:3510013 NCBI chrNW_004936558:4,127,477...4,188,307
Ensembl chrNW_004936558:4,127,477...4,232,393
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830814|PMID:20153830) MGI
TreeGrafter
Ensembl
PMID:20153830 GO_REF:0000107 GO_REF:0000118 MGI:4830814 NCBI chrNW_004936888:554,859...557,759
Ensembl chrNW_004936888:554,822...557,713
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,544,047...7,575,922
Ensembl chrNW_004936512:7,544,003...7,576,315
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (MGI:5306536|PMID:22133810) MGI PMID:22133810 MGI:5306536 NCBI chrNW_004936589:4,120,162...4,661,258
Ensembl chrNW_004936589:4,123,182...4,382,005
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4461108|PMID:20041218) MGI
Ensembl
PMID:20041218 GO_REF:0000107 MGI:4461108 NCBI chrNW_004936471:24,142,227...24,330,966
Ensembl chrNW_004936471:24,141,928...24,330,967
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718715|PMID:17664423) MGI
Ensembl
PMID:17664423 GO_REF:0000107 MGI:3718715 NCBI chrNW_004936600:3,714,630...3,728,813
Ensembl chrNW_004936600:3,714,095...3,728,815
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718715|PMID:17664423) MGI
Ensembl
PMID:17664423 GO_REF:0000107 MGI:3718715 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718715|PMID:17664423) MGI
Ensembl
PMID:17664423 GO_REF:0000107 MGI:3718715 NCBI chrNW_004936668:3,246,456...3,255,353
Ensembl chrNW_004936668:3,246,456...3,255,353
JBrowse link
G LOC101960999 voltage-dependent P/Q-type calcium channel subunit alpha-1A acts_upstream_of_or_within ISO (MGI:62667|PMID:1306163)
(MGI:1347769|PMID:10630211)
(MGI:68980|PMID:7834360)
MGI PMID:1306163 PMID:7834360 PMID:10630211 MGI:1347769 MGI:62667 MGI:68980 NCBI chrNW_004936659:2,201,606...2,269,625
Ensembl chrNW_004936659:2,192,610...2,392,638
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (MGI:3512714|PMID:15345707) MGI PMID:15345707 MGI:3512714 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136
JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:86446|PMID:8996814) MGI
Ensembl
PMID:8996814 GO_REF:0000107 MGI:86446 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5565016|PMID:24491816)
(MGI:5300220|PMID:21937600)
MGI
Ensembl
PMID:21937600 PMID:24491816 GO_REF:0000107 MGI:5300220 MGI:5565016 NCBI chrNW_004936983:156,466...197,281
Ensembl chrNW_004936983:161,836...197,276
JBrowse link
G Slc25a46 solute carrier family 25 member 46 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5921109|PMID:28934388) MGI
Ensembl
PMID:28934388 GO_REF:0000107 MGI:5921109 NCBI chrNW_004936531:5,177,750...5,201,362
Ensembl chrNW_004936531:5,177,739...5,203,955
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6152587|PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 MGI:6152587 NCBI chrNW_004936469:13,365,168...13,454,340
Ensembl chrNW_004936469:13,365,087...13,454,340
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6269036|PMID:30420556) MGI
Ensembl
PMID:30420556 GO_REF:0000107 MGI:6269036 NCBI chrNW_004936718:869,901...884,708
Ensembl chrNW_004936718:869,876...884,684
JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3762988|PMID:17954912) MGI
Ensembl
PMID:17954912 GO_REF:0000107 MGI:3762988 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G Whrn whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:3,668,465...3,748,234
Ensembl chrNW_004936487:3,669,104...3,748,238
JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936474:12,517,800...12,613,170
Ensembl chrNW_004936474:12,517,765...12,614,968
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chrNW_004937107:203,120...207,185 JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793375|PMID:18257070) MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5469811|PMID:23174213) MGI
Ensembl
PMID:23174213 GO_REF:0000107 MGI:5469811 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206
JBrowse link
dentinogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:5912858|PMID:25027178) RGD
TreeGrafter
MGI
PMID:24502800 PMID:25027178 GO_REF:0000118 MGI:5912858 RGD:12911210 NCBI chrNW_004936905:458,062...463,359
Ensembl chrNW_004936905:458,298...463,346
JBrowse link
G Fam20c FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432245|PMID:22732358) MGI
Ensembl
PMID:22732358 GO_REF:0000107 MGI:5432245 NCBI chrNW_004936754:596,878...649,585
Ensembl chrNW_004936754:596,872...653,098
JBrowse link
G Htra1 HtrA serine peptidase 1 ISO RGD PMID:22595117 RGD:7394756 NCBI chrNW_004936486:11,271,130...11,317,271
Ensembl chrNW_004936486:11,271,130...11,316,739
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:12369784 RGD:7243151 NCBI chrNW_004936597:1,667,700...1,684,533
Ensembl chrNW_004936597:1,667,569...1,684,539
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3587156|PMID:16025116) MGI
Ensembl
PMID:16025116 GO_REF:0000107 MGI:3587156 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208
JBrowse link
ectoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:1344734|PMID:10498685) MGI PMID:10498685 MGI:1344734 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1344734|PMID:10498685) MGI
Ensembl
PMID:10498685 GO_REF:0000107 MGI:1344734 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
ectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (MGI:5616945|PMID:25446535) MGI PMID:25446535 MGI:5616945 NCBI chrNW_004936533:3,569,435...3,595,991
Ensembl chrNW_004936533:3,569,452...3,596,004
JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5616945|PMID:25446535) MGI
Ensembl
PMID:25446535 GO_REF:0000107 MGI:5616945 NCBI chrNW_004936500:4,244,706...4,257,223
Ensembl chrNW_004936500:4,244,604...4,257,265
JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (MGI:1355046|PMID:10742100) MGI PMID:10742100 MGI:1355046 NCBI chrNW_004936837:827,568...838,933 JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,224,174...33,245,076
Ensembl chrNW_004936471:33,224,859...33,245,030
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ret ret proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513229|PMID:15569713) MGI
Ensembl
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chrNW_004936617:2,927,185...2,980,594
Ensembl chrNW_004936617:2,927,155...2,980,602
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513229|PMID:15569713) MGI
Ensembl
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chrNW_004936629:114,175...168,697
Ensembl chrNW_004936629:114,850...167,505
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624584|PMID:16546160) MGI
Ensembl
PMID:16546160 GO_REF:0000107 MGI:3624584 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1927045|PMID:11076684) MGI
Ensembl
PMID:11076684 GO_REF:0000107 MGI:1927045 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175
JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin X-linked involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:1,169,906...1,174,166
Ensembl chrNW_004936470:1,169,906...1,179,604
JBrowse link
G Cftr CF transmembrane conductance regulator ISO RGD PMID:31942562 RGD:126928119 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5559016|PMID:24339795) MGI
Ensembl
PMID:24339795 GO_REF:0000107 MGI:5559016 NCBI chrNW_004936744:715,523...754,148
Ensembl chrNW_004936744:714,721...771,835
JBrowse link
G Fam20a FAM20A golgi associated secretory pathway pseudokinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432245|PMID:22732358) MGI
TreeGrafter
Ensembl
PMID:22732358 GO_REF:0000107 GO_REF:0000118 MGI:5432245 NCBI chrNW_004936541:7,867,856...7,916,145
Ensembl chrNW_004936541:7,867,303...7,916,154
JBrowse link
G Fam20c FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432245|PMID:22732358) MGI
TreeGrafter
Ensembl
PMID:22732358 GO_REF:0000107 GO_REF:0000118 MGI:5432245 NCBI chrNW_004936754:596,878...649,585
Ensembl chrNW_004936754:596,872...653,098
JBrowse link
G Foxo1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5507902|PMID:23264742) MGI
Ensembl
PMID:23264742 GO_REF:0000107 MGI:5507902 NCBI chrNW_004936469:18,581,855...18,650,109
Ensembl chrNW_004936469:18,581,840...18,650,123
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1355063|PMID:10742104) MGI
Ensembl
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814115|PMID:18703497) MGI
Ensembl
PMID:18703497 GO_REF:0000107 MGI:3814115 NCBI chrNW_004936542:4,501,081...4,602,338
Ensembl chrNW_004936542:4,539,931...4,602,344
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3843118|PMID:19320717) MGI
Ensembl
PMID:19320717 GO_REF:0000107 MGI:3843118 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626
JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISO (PMID:24621671) UniProt PMID:24621671 NCBI chrNW_004936498:849,775...1,063,552
Ensembl chrNW_004936498:849,739...1,063,552
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:3848106|PMID:19233155) MGI PMID:19233155 MGI:3848106 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525
JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5469811|PMID:23174213) MGI
Ensembl
PMID:23174213 GO_REF:0000107 MGI:5469811 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206
JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5605934|PMID:25008349)
(MGI:5906533|PMID:26247047)
MGI
Ensembl
PMID:25008349 PMID:26247047 GO_REF:0000107 MGI:5605934 MGI:5906533 NCBI chrNW_004936471:15,233,828...15,416,415
Ensembl chrNW_004936471:15,233,840...15,416,415
JBrowse link
endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Aplnr apelin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:5,230,836...5,234,562
Ensembl chrNW_004936581:5,231,242...5,232,384
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611958|PMID:16314491) MGI
Ensembl
PMID:16314491 GO_REF:0000107 MGI:3611958 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chrNW_004936505:5,544,011...6,747,417
Ensembl chrNW_004936505:5,548,164...6,094,225
JBrowse link
G Tbx2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:2,769,264...2,778,342
Ensembl chrNW_004936490:2,769,231...2,805,238
JBrowse link
G Tbx20 T-box transcription factor 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:10,887,900...10,939,510
Ensembl chrNW_004936478:10,888,045...10,939,564
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,654,503...4,660,950
Ensembl chrNW_004936580:4,654,503...4,660,966
JBrowse link
G Erg ETS transcription factor ERG acts_upstream_of_or_within ISO (MGI:5442628|PMID:22932696) MGI PMID:22932696 MGI:5442628 NCBI chrNW_004936500:4,459,298...4,623,290
Ensembl chrNW_004936500:4,459,275...4,624,432
JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (MGI:3530185|PMID:15680351) MGI PMID:15680351 MGI:3530185 NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916
JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530185|PMID:15680351) MGI
Ensembl
PMID:15680351 GO_REF:0000107 MGI:3530185 NCBI chrNW_004936639:3,705,225...3,714,696
Ensembl chrNW_004936639:3,703,447...3,716,820
JBrowse link
endocardium formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776202|PMID:17573777) MGI
Ensembl
PMID:17573777 GO_REF:0000107 MGI:3776202 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3716256|PMID:17610846) MGI
Ensembl
PMID:17610846 GO_REF:0000107 MGI:3716256 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3716256|PMID:17610846) MGI
Ensembl
PMID:17610846 GO_REF:0000107 MGI:3716256 NCBI chrNW_004936514:11,231,327...11,233,292
Ensembl chrNW_004936514:11,231,305...11,233,337
JBrowse link
endoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5498579|PMID:23824574)
(MGI:3625553|PMID:12194849)
MGI
Ensembl
PMID:12194849 PMID:23824574 GO_REF:0000107 MGI:3625553 MGI:5498579 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4415813|PMID:18462699) MGI
Ensembl
PMID:18462699 GO_REF:0000107 MGI:4415813 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Dusp1 dual specificity phosphatase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936609:2,688,170...2,691,057
Ensembl chrNW_004936609:2,688,181...2,690,408
JBrowse link
G Dusp2 dual specificity phosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936744:271,619...273,272
Ensembl chrNW_004936744:271,469...273,326
JBrowse link
G Dusp4 dual specificity phosphatase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936573:765,954...778,524
Ensembl chrNW_004936573:765,927...781,567
JBrowse link
G Dusp5 dual specificity phosphatase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:1,351,077...1,361,002
Ensembl chrNW_004936486:1,347,885...1,359,903
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4887279|PMID:21245162), (MGI:5293253|PMID:21822279) MGI
Ensembl
PMID:21245162 PMID:21822279 GO_REF:0000107 MGI:4887279 MGI:5293253 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (MGI:77407|PMID:8582296) MGI PMID:8582296 MGI:77407 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3487194|PMID:15355796) MGI
Ensembl
PMID:15355796 GO_REF:0000107 MGI:3487194 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
G Mixl1 Mix paired-like homeobox acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695524|PMID:17151016) MGI
TreeGrafter
Ensembl
PMID:17151016 GO_REF:0000107 GO_REF:0000118 MGI:3695524 NCBI chrNW_004936526:2,984,900...2,989,494
Ensembl chrNW_004936526:2,984,907...2,987,893
JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4415813|PMID:18462699) MGI
Ensembl
PMID:18462699 GO_REF:0000107 MGI:4415813 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5293253|PMID:21822279) MGI
Ensembl
PMID:21822279 GO_REF:0000107 MGI:5293253 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
G Sox7 SRY-box transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:2,616,086...2,622,436
Ensembl chrNW_004936675:2,616,077...2,622,436
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO (MGI:5315650|PMID:22187428) MGI PMID:22187428 MGI:5315650 NCBI chrNW_004936594:2,656,079...2,741,254
Ensembl chrNW_004936594:2,656,045...2,741,233
JBrowse link
endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd3 bromodomain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,993,284...3,023,185
Ensembl chrNW_004936669:2,993,187...3,021,200
JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936730:466,912...680,823
Ensembl chrNW_004936730:468,039...680,753
JBrowse link
G Col12a1 collagen type XII alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936788:533,811...645,821
Ensembl chrNW_004936788:533,802...645,907
JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,270,836...2,416,324
Ensembl chrNW_004936472:2,270,819...2,416,349
JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Col7a1 collagen type VII alpha 1 chain involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004936529:348,938...381,701 JBrowse link
G Col8a1 collagen type VIII alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:3,443,085...3,590,430
Ensembl chrNW_004936630:3,443,068...3,590,516
JBrowse link
G Fn1 fibronectin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:1,708,803...1,773,372
Ensembl chrNW_004936586:1,708,684...1,773,383
JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1315079|PMID:9832509) MGI
Ensembl
PMID:9832509 GO_REF:0000107 MGI:1315079 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
JBrowse link
G Grb2 growth factor receptor bound protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3689690|PMID:16908534) MGI
Ensembl
PMID:16908534 GO_REF:0000107 MGI:3689690 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
G Hsbp1 heat shock factor binding protein 1 acts_upstream_of_or_within ISO (MGI:5553204|PMID:24380799) MGI PMID:24380799 MGI:5553204 NCBI chrNW_004936641:3,911,943...3,916,397 JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:21828274) BHF-UCL PMID:21828274 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Itga4 integrin subunit alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:10,215,283...10,293,653
Ensembl chrNW_004936509:10,215,283...10,292,252
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,588,818...11,612,580
Ensembl chrNW_004936512:11,588,645...11,612,669
JBrowse link
G Itga7 integrin subunit alpha 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:160,661...179,454
Ensembl chrNW_004936646:161,332...179,481
JBrowse link
G Itgav integrin subunit alpha V involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:10,750,116...10,839,018
Ensembl chrNW_004936506:10,750,101...10,839,303
JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194
JBrowse link
G Itgb5 integrin subunit beta 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936725:417,824...530,993
Ensembl chrNW_004936725:417,433...532,760
JBrowse link
G Lamb1 laminin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:16,177,200...16,245,268
Ensembl chrNW_004936479:16,177,158...16,247,165
JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:3,429,488...3,487,995
Ensembl chrNW_004936557:3,450,247...3,487,954
JBrowse link
G LOC101971816 laminin subunit alpha-3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:3,121,163...3,357,517
Ensembl chrNW_004936550:3,122,089...3,355,319
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:3689690|PMID:16908534) MGI
Ensembl
PMID:16908534 GO_REF:0000107 MGI:3689690 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Mixl1 Mix paired-like homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:2,984,900...2,989,494
Ensembl chrNW_004936526:2,984,907...2,987,893
JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:1,447,189...1,457,632
Ensembl chrNW_004936722:1,447,335...1,457,611
JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,951,876...9,971,631
Ensembl chrNW_004936475:9,951,778...9,971,666
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,228,950...5,238,948
Ensembl chrNW_004936551:5,228,950...5,238,948
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
JBrowse link
G Myh9 myosin heavy chain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nr0b1 nuclear receptor subfamily 0 group B member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640222|PMID:16466956) MGI
Ensembl
PMID:16466956 GO_REF:0000107 MGI:3640222 NCBI chrNW_004936553:6,436,371...6,440,141
Ensembl chrNW_004936553:6,436,371...6,440,141
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of
involved_in
ISO
IEA
(MGI:3764939|PMID:17940068) MGI
Ensembl
PMID:17940068 GO_REF:0000107 MGI:3764939 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
G Vtn vitronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,522,275...4,525,245
Ensembl chrNW_004936538:4,522,074...4,525,336
JBrowse link
endodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936638:1,365,457...1,482,497
Ensembl chrNW_004936638:1,365,648...1,483,277
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3625553|PMID:12194849) Ensembl
MGI
PMID:12194849 GO_REF:0000107 MGI:3625553 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:13,753,061...13,783,990
Ensembl chrNW_004936471:13,753,030...13,784,049
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,236,121...2,241,086
Ensembl chrNW_004936661:2,232,484...2,241,629
JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (MGI:1355046|PMID:10742100) MGI PMID:10742100 MGI:1355046 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,770,060...4,829,562
Ensembl chrNW_004936471:4,770,063...4,829,578
JBrowse link
endodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4442295|PMID:20308546) MGI
Ensembl
PMID:20308546 GO_REF:0000107 MGI:4442295 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4442295|PMID:20308546) MGI
Ensembl
PMID:20308546 GO_REF:0000107 MGI:4442295 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4887279|PMID:21245162) MGI
TreeGrafter
Ensembl
PMID:21245162 GO_REF:0000107 GO_REF:0000118 MGI:4887279 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807614|PMID:18635606) MGI
Ensembl
PMID:18635606 GO_REF:0000107 MGI:3807614 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672
JBrowse link
G Nanog Nanog homeobox acts_upstream_of_or_within ISO (PMID:20713518) MGI PMID:20713518 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:20713518) MGI PMID:20713518 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21245162) MGI
Ensembl
PMID:21245162 GO_REF:0000107 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613
JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (MGI:6415430|PMID:32369453) MGI PMID:32369453 MGI:6415430 NCBI chrNW_004936488:4,653,891...4,713,982
Ensembl chrNW_004936488:4,653,692...4,712,313
JBrowse link
epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in ISO (MGI:3814273|PMID:18924235) BHF-UCL PMID:18924235 MGI:3814273 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Eng endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5002778|PMID:21364285) MGI
Ensembl
PMID:21364285 GO_REF:0000107 MGI:5002778 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (MGI:3783952|PMID:17303760) MGI PMID:17303760 MGI:3783952 NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916
JBrowse link
G Heyl hes related family bHLH transcription factor with YRPW motif like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3783952|PMID:17303760) MGI
Ensembl
PMID:17303760 GO_REF:0000107 MGI:3783952 NCBI chrNW_004936474:21,503,763...21,513,392
Ensembl chrNW_004936474:21,505,149...21,510,624
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3810851|PMID:18667074) MGI
Ensembl
PMID:18667074 GO_REF:0000107 MGI:3810851 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3810851|PMID:18667074) MGI
Ensembl
PMID:18667074 GO_REF:0000107 MGI:3810851 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,456,498...4,462,436
Ensembl chrNW_004936514:4,456,484...4,462,987
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3808643|PMID:18663143) MGI
Ensembl
PMID:18663143 GO_REF:0000107 MGI:3808643 NCBI chrNW_004936590:3,813,916...3,817,642
Ensembl chrNW_004936590:3,813,888...3,817,642
JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5613881|PMID:25318679) MGI
Ensembl
PMID:25318679 GO_REF:0000107 MGI:5613881 NCBI chrNW_004936490:6,958,064...6,963,888
Ensembl chrNW_004936490:6,958,096...6,964,536
JBrowse link
epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Podxl podocalyxin like involved_in ISO (PMID:15814834) UniProt PMID:15814834 NCBI chrNW_004936579:3,960,338...3,970,925 JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814781|PMID:18606138) MGI
Ensembl
PMID:18606138 GO_REF:0000107 MGI:3814781 NCBI chrNW_004936470:40,381,215...40,392,105
Ensembl chrNW_004936470:40,377,835...40,392,225
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601
JBrowse link
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629001|PMID:16720875) MGI
TreeGrafter
Ensembl
PMID:16720875 GO_REF:0000107 GO_REF:0000118 MGI:3629001 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:3629001|PMID:16720875) MGI PMID:16720875 MGI:3629001 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk20 cyclin dependent kinase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5912686|PMID:28817564) MGI
Ensembl
PMID:28817564 GO_REF:0000107 MGI:5912686 NCBI chrNW_004936854:810,996...817,136
Ensembl chrNW_004936854:812,575...817,202
JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5488668|PMID:23351563) MGI
Ensembl
PMID:23351563 GO_REF:0000107 MGI:5488668 NCBI chrNW_004936694:779,399...810,534
Ensembl chrNW_004936694:780,197...810,457
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1276795|PMID:9636069), (MGI:1277040|PMID:9655799) MGI
Ensembl
PMID:9636069 PMID:9655799 GO_REF:0000107 MGI:1276795 MGI:1277040 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:892757|PMID:9169845) Ensembl
MGI
PMID:9169845 GO_REF:0000107 MGI:892757 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075
JBrowse link
formation of anatomical boundary term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611720|PMID:16368929) MGI
Ensembl
PMID:16368929 GO_REF:0000107 MGI:3611720 NCBI chrNW_004937847:8,179...16,783
Ensembl chrNW_004937847:7,456...16,783
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155575|PMID:11311163) MGI
Ensembl
PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1277744|PMID:9731532) MGI
Ensembl
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:3789431|PMID:18448678) MGI PMID:18448678 MGI:3789431 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,529,508...1,552,148
Ensembl chrNW_004936712:1,529,420...1,552,185
JBrowse link
G Kif16b kinesin family member 16B involved_in ISO (MGI:4889011|PMID:21238925) UniProt PMID:21238925 MGI:4889011 NCBI chrNW_004936485:3,443,878...3,728,613
Ensembl chrNW_004936485:3,443,878...3,726,174
JBrowse link
fungiform papilla formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3696593|PMID:17128274) MGI
Ensembl
PMID:17128274 GO_REF:0000107 MGI:3696593 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:15581865 RGD:1580345 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of ISO (MGI:3619310|PMID:14607964) MGI PMID:14607964 MGI:3619310 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (MGI:3828349|PMID:17371977) BHF-UCL PMID:17371977 MGI:3828349 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
JBrowse link
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85481|PMID:9009202)
(MGI:3655550|PMID:10586052), (MGI:87096|PMID:9133427)
MGI
Ensembl
PMID:9009202 PMID:9133427 PMID:10586052 GO_REF:0000107 MGI:3655550 MGI:85481 MGI:87096 NCBI chrNW_004936706:1,410,848...1,427,822
Ensembl chrNW_004936706:1,416,249...1,427,407
JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87164|PMID:9110977)
(MGI:892135|PMID:9171827)
(MGI:1096098|PMID:9236196), (MGI:3654378|PMID:12354385)
MGI
Ensembl
PMID:9110977 PMID:9171827 PMID:9236196 PMID:12354385 GO_REF:0000107 MGI:1096098 MGI:3654378 MGI:87164 MGI:892135 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Klhl6 kelch like family member 6 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936578:6,226,533...6,284,343
Ensembl chrNW_004936578:6,226,495...6,284,293
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3655550|PMID:10586052) MGI
Ensembl
PMID:10586052 GO_REF:0000107 MGI:3655550 NCBI chrNW_004936600:3,465,016...3,471,258
Ensembl chrNW_004936600:3,465,162...3,471,205
JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of ISO (MGI:3036943|PMID:14557413) MGI PMID:14557413 MGI:3036943 NCBI chrNW_004936492:98,878...101,920 JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of ISO (MGI:3037416|PMID:14988498) MGI PMID:14988498 MGI:3037416 NCBI chrNW_004936595:839,877...842,962
Ensembl chrNW_004936595:839,877...842,962
JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of
involved_in
ISO
IEA
(MGI:3036943|PMID:14557413) MGI
Ensembl
PMID:14557413 GO_REF:0000107 MGI:3036943 NCBI chrNW_004936472:3,789,111...3,834,163
Ensembl chrNW_004936472:3,788,095...3,822,148
JBrowse link
G Unc13d unc-13 homolog D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703574|PMID:17420270) MGI
Ensembl
PMID:17420270 GO_REF:0000107 MGI:3703574 NCBI chrNW_004936594:1,008,215...1,023,023
Ensembl chrNW_004936594:1,008,327...1,021,878
JBrowse link
glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G LOC101965998 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321
JBrowse link
G Notch3 notch receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:5,265,984...5,301,430
Ensembl chrNW_004936596:5,265,999...5,300,429
JBrowse link
hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4355652|PMID:19619491)
(MGI:1934694|PMID:11371349)
MGI
Ensembl
PMID:11371349 PMID:19619491 GO_REF:0000107 MGI:1934694 MGI:4355652 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Eda ectodysplasin A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4355652|PMID:19619491) MGI
Ensembl
PMID:19619491 GO_REF:0000107 MGI:4355652 NCBI chrNW_004936777:1,545,293...1,561,109
Ensembl chrNW_004936777:1,238,272...1,557,410
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641
JBrowse link
G LOC101971027 neuroendocrine secretory protein 55 involved_in ISO (PMID:12719376) UniProt PMID:12719376 NCBI chrNW_004936530:1,353,432...1,407,437 JBrowse link
heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5907444|PMID:26295701) MGI
Ensembl
PMID:26295701 GO_REF:0000107 MGI:5907444 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3702797|PMID:16943278) MGI
Ensembl
PMID:16943278 GO_REF:0000107 MGI:3702797 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:8,854,266...8,862,127
Ensembl chrNW_004936530:8,854,203...8,862,126
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:4361064|PMID:19654211) MGI PMID:19654211 MGI:4361064 NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,170,954...25,188,298
Ensembl chrNW_004936476:25,170,973...25,186,965
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,472,170...1,652,314
Ensembl chrNW_004936486:1,472,227...1,653,209
JBrowse link
heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Gata5 GATA binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:10,061,675...10,070,541
Ensembl chrNW_004936514:10,061,675...10,070,541
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chrNW_004936505:5,544,011...6,747,417
Ensembl chrNW_004936505:5,548,164...6,094,225
JBrowse link
heart trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776329|PMID:18267097) MGI
Ensembl
PMID:18267097 GO_REF:0000107 MGI:3776329 NCBI chrNW_004936640:959,405...967,305
Ensembl chrNW_004936640:959,417...968,842
JBrowse link
G Adgrg6 adhesion G protein-coupled receptor G6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936625:3,552,611...3,688,281
Ensembl chrNW_004936625:3,552,602...3,688,287
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3849772|PMID:19535499) MGI
Ensembl
PMID:19535499 GO_REF:0000107 MGI:3849772 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161
JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 acts_upstream_of_or_within ISO (MGI:3689683|PMID:16966370) MGI PMID:16966370 MGI:3689683 NCBI chrNW_004936484:19,343,770...19,386,087 JBrowse link
G Fhl2 four and a half LIM domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936764:613,863...656,220
Ensembl chrNW_004936764:613,193...656,224
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (MGI:1195585|PMID:9461216) BHF-UCL PMID:9461216 MGI:1195585 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936639:3,705,225...3,714,696
Ensembl chrNW_004936639:3,703,447...3,716,820
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3773736|PMID:16510504) MGI
Ensembl
PMID:16510504 GO_REF:0000107 MGI:3773736 NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046
JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776202|PMID:17573777) MGI
Ensembl
PMID:17573777 GO_REF:0000107 MGI:3776202 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:2655947|PMID:12663486) BHF-UCL PMID:12663486 MGI:2655947 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3776329|PMID:18267097) MGI PMID:18267097 MGI:3776329 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513738|PMID:15569937) MGI
Ensembl
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (MGI:68132|PMID:7958865) UniProt PMID:7958865 MGI:68132 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:2663364 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709829|PMID:17350610) MGI
Ensembl
PMID:17350610 GO_REF:0000107 MGI:3709829 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3838687|PMID:19182774)
(MGI:3580923|PMID:15677567), (MGI:3807430|PMID:18550854)
MGI
Ensembl
PMID:15677567 PMID:18550854 PMID:19182774 GO_REF:0000107 MGI:3580923 MGI:3807430 MGI:3838687 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065
JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:2,771,420...2,897,694
Ensembl chrNW_004936558:2,771,420...2,897,292
JBrowse link
inner cell mass cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5528755|PMID:24036311) MGI
Ensembl
PMID:24036311 GO_REF:0000107 MGI:5528755 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1346632|PMID:10518496) MGI
Ensembl
PMID:10518496 GO_REF:0000107 MGI:1346632 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672
JBrowse link
G LOC101960775 cell division cycle and apoptosis regulator protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,573,918...9,624,469
Ensembl chrNW_004936521:9,569,760...9,625,236
Ensembl chrNW_004936521:9,569,760...9,625,236
JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3623851|PMID:16611995) MGI
Ensembl
PMID:16611995 GO_REF:0000107 MGI:3623851 NCBI chrNW_004936538:101,245...109,796
Ensembl chrNW_004936538:101,047...109,873
JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5502808|PMID:23824537) MGI
Ensembl
PMID:23824537 GO_REF:0000107 MGI:5502808 NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879
JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5502808|PMID:23824537) MGI
Ensembl
PMID:23824537 GO_REF:0000107 MGI:5502808 NCBI chrNW_004936720:735,326...795,596
Ensembl chrNW_004936720:735,524...793,696
JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5528721|PMID:24183668) MGI
Ensembl
PMID:24183668 GO_REF:0000107 MGI:5528721 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967
JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5502808|PMID:23824537) MGI
Ensembl
PMID:23824537 GO_REF:0000107 MGI:5502808 NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879
JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5502808|PMID:23824537) MGI
Ensembl
PMID:23824537 GO_REF:0000107 MGI:5502808 NCBI chrNW_004936720:735,326...795,596
Ensembl chrNW_004936720:735,524...793,696
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4946462|PMID:21146513) MGI
Ensembl
PMID:21146513 GO_REF:0000107 MGI:4946462 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
intermediate mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
intussusceptive angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2446415|PMID:12446788) MGI
Ensembl
PMID:12446788 GO_REF:0000107 MGI:2446415 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358
JBrowse link
kidney rudiment formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561
JBrowse link
lateral mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:1928688|PMID:11124112) MGI PMID:11124112 MGI:1928688 NCBI chrNW_004943883:4...1,756 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441
JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,653,233...9,683,258
Ensembl chrNW_004936475:9,671,868...9,681,988
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149271|PMID:11517264) MGI
Ensembl
PMID:11517264 GO_REF:0000107 MGI:2149271 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149271|PMID:11517264) MGI
Ensembl
PMID:11517264 GO_REF:0000107 MGI:2149271 NCBI chrNW_004936538:2,411,194...2,415,106
Ensembl chrNW_004936538:2,413,967...2,414,890
JBrowse link
G Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149271|PMID:11517264) MGI
Ensembl
PMID:11517264 GO_REF:0000107 MGI:2149271 NCBI chrNW_004936569:1,381,101...1,383,593
Ensembl chrNW_004936569:1,381,262...1,382,365
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4454697|PMID:20503375) MGI
Ensembl
PMID:20503375 GO_REF:0000107 MGI:4454697 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3844387|PMID:19342486) MGI
Ensembl
PMID:19342486 GO_REF:0000107 MGI:3844387 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508
JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4949945|PMID:21525285) Ensembl
MGI
PMID:21525285 GO_REF:0000107 MGI:4949945 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769085|PMID:17330141) MGI
Ensembl
PMID:17330141 GO_REF:0000107 MGI:3769085 NCBI chrNW_004936522:7,740,887...7,820,488
Ensembl chrNW_004936522:7,740,887...7,816,297
JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5507927|PMID:23097495) MGI
Ensembl
PMID:23097495 GO_REF:0000107 MGI:5507927 NCBI chrNW_004936994:285,041...294,661
Ensembl chrNW_004936994:285,000...295,167
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629819|PMID:15385616) MGI
Ensembl
PMID:15385616 GO_REF:0000107 MGI:3629819 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769085|PMID:17330141) MGI
Ensembl
PMID:17330141 GO_REF:0000107 MGI:3769085 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015
JBrowse link
G Reln reelin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5319303|PMID:20847152) MGI
Ensembl
PMID:20847152 GO_REF:0000107 MGI:5319303 NCBI chrNW_004936479:19,628,488...20,088,278
Ensembl chrNW_004936479:19,628,940...20,087,250
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) MGI PMID:24210661 MGI:5545793 NCBI chrNW_004936490:13,826,642...13,874,984
Ensembl chrNW_004936490:13,826,636...13,874,603
JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513737|PMID:15569927) MGI
Ensembl
PMID:15569927 GO_REF:0000107 MGI:3513737 NCBI chrNW_004936545:7,286,018...7,407,623
Ensembl chrNW_004936545:7,396,023...7,407,637
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1309706|PMID:9784490) MGI
Ensembl
PMID:9784490 GO_REF:0000107 MGI:1309706 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:1197797|PMID:9435295)
(MGI:1346744|PMID:10518547)
MGI PMID:9435295 PMID:10518547 MGI:1197797 MGI:1346744 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Plxna2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453
JBrowse link
G Sema3c semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:903,306...1,063,024
Ensembl chrNW_004936810:903,304...1,063,024
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928592|PMID:11118883) MGI
Ensembl
PMID:11118883 GO_REF:0000107 MGI:1928592 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
G Znf219 zinc finger protein 219 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:293,874...308,160
Ensembl chrNW_004936880:289,876...298,243
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4361775|PMID:19805295)
(MGI:4360856|PMID:19686689)
MGI
Ensembl
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4360856|PMID:19686689) MGI
Ensembl
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chrNW_004936589:1,825,209...1,866,898
Ensembl chrNW_004936589:1,825,209...1,866,889
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4360856|PMID:19686689) MGI
Ensembl
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chrNW_004936690:1,077,538...1,094,005
Ensembl chrNW_004936690:1,079,227...1,097,041
JBrowse link
lung lobe formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (MGI:3784878|PMID:17142311) MGI PMID:17142311 MGI:3784878 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,816,366...27,822,555
Ensembl chrNW_004936473:27,815,399...27,822,476
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432672|PMID:21778431) MGI
Ensembl
PMID:21778431 GO_REF:0000107 MGI:5432672 NCBI chrNW_004936497:5,290,068...5,321,656
Ensembl chrNW_004936497:5,290,077...5,321,876
JBrowse link
G Clec14a C-type lectin domain containing 14A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5881854|PMID:27991863) MGI
Ensembl
PMID:27991863 GO_REF:0000107 MGI:5881854 NCBI chrNW_004936494:12,112,163...12,115,836
Ensembl chrNW_004936494:12,114,371...12,115,787
JBrowse link
G Flt4 fms related receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:240,572...281,925
Ensembl chrNW_004936739:236,510...281,729
JBrowse link
G Foxc2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:3848105 NCBI chrNW_004936616:484,062...584,950
Ensembl chrNW_004936616:484,045...587,891
JBrowse link
G Pdpn podoplanin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522394|PMID:12853470) MGI
Ensembl
PMID:12853470 GO_REF:0000107 MGI:3522394 NCBI chrNW_004936474:1,751,159...1,779,011
Ensembl chrNW_004936474:1,750,944...1,781,156
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3848104|PMID:19233846) Ensembl
MGI
PMID:19233846 GO_REF:0000107 MGI:3848104 NCBI chrNW_004936521:5,576,705...5,614,738
Ensembl chrNW_004936521:5,575,996...5,615,370
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Ptpn14 protein tyrosine phosphatase non-receptor type 14 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936628:3,739,223...3,916,157
Ensembl chrNW_004936628:3,739,152...3,907,662
JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828192|PMID:18931657) MGI
TreeGrafter
Ensembl
PMID:18931657 GO_REF:0000107 GO_REF:0000118 MGI:3828192 NCBI chrNW_004936514:11,231,327...11,233,292
Ensembl chrNW_004936514:11,231,305...11,233,337
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of
involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:4439256|PMID:20133819)
(MGI:3848105|PMID:19233265)
MGI
Ensembl
PMID:19233265 PMID:20133819 GO_REF:0000107 MGI:3848105 MGI:4439256 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
macrophage fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (IN blood group) ISO RGD PMID:16195325 RGD:2289375 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800
JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155478|PMID:11782400) MGI
Ensembl
PMID:11782400 GO_REF:0000107 MGI:2155478 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:2155478|PMID:11782400) MGI PMID:11782400 MGI:2155478 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
mammary gland formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695659|PMID:17071745) MGI
Ensembl
PMID:17071745 GO_REF:0000107 MGI:3695659 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629001|PMID:16720875) MGI
Ensembl
PMID:16720875 GO_REF:0000107 MGI:3629001 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629001|PMID:16720875) MGI
Ensembl
PMID:16720875 GO_REF:0000107 MGI:3629001 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (MGI:3629001|PMID:16720875) MGI PMID:16720875 MGI:3629001 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815
JBrowse link
mammary placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101957192 pro-neuregulin-3, membrane-bound isoform acts_upstream_of_or_within ISO (MGI:1353819|PMID:10723730) MGI PMID:10723730 MGI:1353819 NCBI chrNW_004936716:1,362,574...2,391,432 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608166|PMID:16222716) MGI
Ensembl
PMID:16222716 GO_REF:0000107 MGI:3608166 NCBI chrNW_004936490:2,769,264...2,778,342
Ensembl chrNW_004936490:2,769,231...2,805,238
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695659|PMID:17071745)
(MGI:3608166|PMID:16222716)
MGI
Ensembl
PMID:16222716 PMID:17071745 GO_REF:0000107 MGI:3608166 MGI:3695659 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
JBrowse link
mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1345529|PMID:10479450)
(MGI:3695845|PMID:17117439)
MGI
Ensembl
PMID:10479450 PMID:17117439 GO_REF:0000107 MGI:1345529 MGI:3695845 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Ahdc1 AT-hook DNA binding motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,824,692...11,846,355
Ensembl chrNW_004936474:11,824,697...11,876,817
JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913685|PMID:28911199) MGI
Ensembl
PMID:28911199 GO_REF:0000107 MGI:5913685 NCBI chrNW_004936543:8,354,795...8,366,123
Ensembl chrNW_004936543:8,354,760...8,361,269
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4415813|PMID:18462699), (MGI:70235|PMID:7799920) MGI
Ensembl
PMID:7799920 PMID:18462699 GO_REF:0000107 MGI:4415813 MGI:70235 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578079|PMID:15843411) MGI
Ensembl
PMID:15843411 GO_REF:0000107 MGI:3578079 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3722226|PMID:17699604) MGI
Ensembl
PMID:17699604 GO_REF:0000107 MGI:3722226 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1855789|PMID:10772805) MGI
Ensembl
PMID:10772805 GO_REF:0000107 MGI:1855789 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO (MGI:2662951|PMID:12810603) MGI PMID:12810603 MGI:2662951 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in IEA
ISS
Ensembl
CAFA
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4415813|PMID:18462699) MGI
Ensembl
PMID:18462699 GO_REF:0000107 MGI:4415813 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Ecsit ECSIT signaling integrator acts_upstream_of_or_within ISO (MGI:2682456|PMID:14633973) MGI PMID:14633973 MGI:2682456 NCBI chrNW_004936659:1,550,192...1,563,534
Ensembl chrNW_004936659:1,549,581...1,563,574
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354065|PMID:10716450) MGI
TreeGrafter
Ensembl
PMID:10716450 GO_REF:0000107 GO_REF:0000118 MGI:1354065 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179
JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699) MGI PMID:18462699 MGI:4415813 NCBI chrNW_004936570:671,152...673,768 JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608483|PMID:16236767) MGI
Ensembl
PMID:16236767 GO_REF:0000107 MGI:3608483 NCBI chrNW_004936562:4,345,146...4,489,180
Ensembl chrNW_004936562:4,342,874...4,489,180
JBrowse link
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84014|PMID:8922529) MGI
Ensembl
PMID:8922529 GO_REF:0000107 MGI:84014 NCBI chrNW_004936570:1,582,120...1,608,537
Ensembl chrNW_004936570:1,579,372...1,608,788
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1197801|PMID:9500550) MGI
Ensembl
PMID:9500550 GO_REF:0000107 MGI:1197801 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175
JBrowse link
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (MGI:70235|PMID:7799920) MGI PMID:7799920 MGI:70235 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Macf1 microtubule actin crosslinking factor 1 acts_upstream_of_or_within ISO (MGI:3640889|PMID:16815997) MGI PMID:16815997 MGI:3640889 NCBI chrNW_004936474:21,053,755...21,401,336
Ensembl chrNW_004936474:21,178,791...21,400,147
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:15,555,084...15,557,060
Ensembl chrNW_004936483:15,555,084...15,557,060
JBrowse link
G Msgn1 mesogenin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:13,129,883...13,130,464
Ensembl chrNW_004936493:13,129,883...13,130,464
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:707944|PMID:9171370) MGI
Ensembl
PMID:9171370 GO_REF:0000107 MGI:707944 NCBI chrNW_004936657:3,536,212...3,622,999
Ensembl chrNW_004936657:3,536,141...3,623,821
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155575|PMID:11311163) MGI
Ensembl
PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4415813|PMID:18462699) MGI
Ensembl
PMID:18462699 GO_REF:0000107 MGI:4415813 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (MGI:3042044|PMID:13129926) MGI PMID:13129926 MGI:3042044 NCBI chrNW_004936524:8,252,321...8,290,747
Ensembl chrNW_004936524:8,252,381...8,289,157
JBrowse link
G Pofut2 protein O-fucosyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4838381|PMID:20637190) MGI
Ensembl
PMID:20637190 GO_REF:0000107 MGI:4838381 NCBI chrNW_004936778:1,024,066...1,036,365
Ensembl chrNW_004936778:1,023,992...1,039,135
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2183097|PMID:12004056) MGI
Ensembl
PMID:12004056 GO_REF:0000107 MGI:2183097 NCBI chrNW_004936659:2,750,015...2,765,914
Ensembl chrNW_004936659:2,750,537...2,765,753
JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,353,905...1,464,636
Ensembl chrNW_004936608:1,353,897...1,464,636
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2183097|PMID:12004056) MGI
Ensembl
PMID:12004056 GO_REF:0000107 MGI:2183097 NCBI chrNW_004936541:7,845,876...7,863,677
Ensembl chrNW_004936541:7,845,676...7,863,709
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3039049|PMID:15084457) MGI
Ensembl
PMID:15084457 GO_REF:0000107 MGI:3039049 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3039049|PMID:15084457) MGI
Ensembl
PMID:15084457 GO_REF:0000107 MGI:3039049 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,456,498...4,462,436
Ensembl chrNW_004936514:4,456,484...4,462,987
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1312998|PMID:9799237), (MGI:1927031|PMID:11060034) MGI
Ensembl
PMID:9799237 PMID:11060034 GO_REF:0000107 MGI:1312998 MGI:1927031 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tbx19 T-box transcription factor 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:17,990,435...18,013,180
Ensembl chrNW_004936481:17,990,435...18,013,193
JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577662|PMID:15755804)
(MGI:2447720|PMID:9490412)
MGI
Ensembl
PMID:9490412 PMID:15755804 GO_REF:0000107 MGI:2447720 MGI:3577662 NCBI chrNW_004936501:12,402,709...12,407,571
Ensembl chrNW_004936501:12,402,724...12,407,571
JBrowse link
G Tbxt T-box transcription factor T involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
JBrowse link
G Tlx2 T cell leukemia homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1267265|PMID:9550720) MGI
Ensembl
PMID:9550720 GO_REF:0000107 MGI:1267265 NCBI chrNW_004936556:727,637...729,391
Ensembl chrNW_004936556:727,637...729,361
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578079|PMID:15843411) MGI
Ensembl
PMID:15843411 GO_REF:0000107 MGI:3578079 NCBI chrNW_004936626:1,901,686...1,946,554
Ensembl chrNW_004936626:1,901,680...1,946,460
JBrowse link
G Txnrd1 thioredoxin reductase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3721365|PMID:17697936) MGI
Ensembl
PMID:17697936 GO_REF:0000107 MGI:3721365 NCBI chrNW_004936492:10,185,096...10,244,466
Ensembl chrNW_004936492:10,187,206...10,225,989
JBrowse link
G Wls Wnt ligand secretion mediator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,537,981...3,639,774
Ensembl chrNW_004936591:3,537,981...3,639,774
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
mesoderm migration involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821807|PMID:18794329) MGI
Ensembl
PMID:18794329 GO_REF:0000107 MGI:3821807 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:71468|PMID:7720590) MGI
Ensembl
PMID:7720590 GO_REF:0000107 MGI:71468 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
JBrowse link
mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:70235|PMID:7799920) MGI
Ensembl
PMID:7799920 GO_REF:0000107 MGI:70235 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:7803853 RGD:632663 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:3766861|PMID:17881493) MGI PMID:17881493 MGI:3766861 NCBI chrNW_004943883:4...1,756 JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (MGI:70235|PMID:7799920) MGI PMID:7799920 MGI:70235 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Itga2 integrin subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:14,320,292...14,417,828
Ensembl chrNW_004936480:14,320,692...14,417,786
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,553,904...11,583,387
Ensembl chrNW_004936490:11,553,861...11,583,380
JBrowse link
G Itga8 integrin subunit alpha 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:5,985,181...6,155,067
Ensembl chrNW_004936574:5,984,939...6,155,164
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:2,822,789...2,871,069
Ensembl chrNW_004936541:2,815,738...2,871,035
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:912,302...944,819
Ensembl chrNW_004936594:912,291...946,012
JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5448135|PMID:22949634) MGI
Ensembl
PMID:22949634 GO_REF:0000107 MGI:5448135 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Kdm6b lysine demethylase 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,077,318...1,099,082
Ensembl chrNW_004936595:1,089,544...1,097,595
JBrowse link
mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanog Nanog homeobox acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3654744|PMID:16801560) MGI
Ensembl
PMID:16801560 GO_REF:0000107 MGI:3654744 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (MGI:1355046|PMID:10742100) MGI PMID:10742100 MGI:1355046 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Smad1 SMAD family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3654744|PMID:16801560) MGI
Ensembl
PMID:16801560 GO_REF:0000107 MGI:3654744 NCBI chrNW_004936535:3,582,512...3,626,312
Ensembl chrNW_004936535:3,582,489...3,657,063
JBrowse link
mesodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:76261|PMID:7657163) MGI
Ensembl
PMID:7657163 GO_REF:0000107 MGI:76261 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936648:395,526...546,705
Ensembl chrNW_004936648:395,524...546,729
JBrowse link
G Hoxa11 homeobox A11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:3,809,288...3,813,014
Ensembl chrNW_004936478:3,809,288...3,813,014
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:3768605|PMID:17785448) UniProt PMID:17785448 MGI:3768605 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:3711603|PMID:17462603) MGI
Ensembl
PMID:17462603 GO_REF:0000107 MGI:3711603 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Six2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:7,047,563...7,051,129
Ensembl chrNW_004936508:7,047,304...7,051,732
JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2447720|PMID:9490412) MGI
Ensembl
PMID:9490412 GO_REF:0000107 MGI:2447720 NCBI chrNW_004936501:12,402,709...12,407,571
Ensembl chrNW_004936501:12,402,724...12,407,571
JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561
JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829
JBrowse link
G Tcf21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:1,733,903...1,736,895
Ensembl chrNW_004936560:1,733,903...1,736,890
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,523,658...1,553,464
Ensembl chrNW_004936783:1,523,661...1,576,568
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4939090|PMID:21212101) MGI
Ensembl
PMID:21212101 GO_REF:0000107 MGI:4939090 NCBI chrNW_004936501:128,386...132,648
Ensembl chrNW_004936501:127,703...132,704
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4939090|PMID:21212101) MGI
Ensembl
PMID:21212101 GO_REF:0000107 MGI:4939090 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4950307|PMID:21350016) MGI
Ensembl
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4950307|PMID:21350016) MGI
Ensembl
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561
JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,802,057...6,957,640
Ensembl chrNW_004936522:6,802,052...6,956,129
JBrowse link
mitral valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:677,416...697,013
Ensembl chrNW_004936842:677,416...697,003
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Zfpm1 zinc finger protein, FOG family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,130,073...1,162,022
Ensembl chrNW_004936641:1,130,446...1,138,473
JBrowse link
myelin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fig4 FIG4 phosphoinositide 5-phosphatase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5296993|PMID:22028665) MGI
Ensembl
PMID:22028665 GO_REF:0000107 MGI:5296993 NCBI chrNW_004936564:5,736,908...5,842,210
Ensembl chrNW_004936564:5,736,873...5,842,722
JBrowse link
G Gpc1 glypican 1 involved_in ISO PMID:16407548 UniProt PMID:16407548 RGD:8553537 NCBI chrNW_004936745:1,118,732...1,127,169 JBrowse link
G Ilk integrin linked kinase ISO RGD PMID:14581460 RGD:2302070 NCBI chrNW_004936842:661,961...667,993
Ensembl chrNW_004936842:661,996...667,993
JBrowse link
G Mtmr2 myotubularin related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5296993|PMID:22028665) MGI
Ensembl
PMID:22028665 GO_REF:0000107 MGI:5296993 NCBI chrNW_004936700:1,790,592...1,873,019
Ensembl chrNW_004936700:1,790,064...1,873,034
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISO PMID:20237282 BHF-UCL PMID:20237282 RGD:8554674 NCBI chrNW_004936495:10,636,762...10,729,060
Ensembl chrNW_004936495:10,636,670...10,725,647
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5296993|PMID:22028665) MGI
Ensembl
PMID:22028665 GO_REF:0000107 MGI:5296993 NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4436804|PMID:20071523), (MGI:5800352|PMID:27583434)
(MGI:4452531|PMID:20427655), (MGI:5615856|PMID:25453108)
(MGI:3616944|PMID:16405874)
MGI
TreeGrafter
PMID:16405874 PMID:20071523 PMID:20427655 PMID:25453108 PMID:27583434 GO_REF:0000118 MGI:3616944 MGI:4436804 MGI:4452531 MGI:5615856 MGI:5800352 NCBI chrNW_004936724:1,747,015...1,780,298
Ensembl chrNW_004936724:1,747,005...1,778,141
JBrowse link
G Tppp tubulin polymerization promoting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:842,279...882,985
Ensembl chrNW_004936815:842,087...883,368
JBrowse link
myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:1,935,780...1,960,888
Ensembl chrNW_004936572:1,936,529...1,960,800
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:857,565...899,355
Ensembl chrNW_004936640:858,322...898,182
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936618:783,363...1,453,620
Ensembl chrNW_004936618:786,816...1,455,747
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618019|PMID:10949052) MGI
Ensembl
PMID:10949052 GO_REF:0000107 MGI:3618019 NCBI chrNW_004936567:3,269,283...3,331,858
Ensembl chrNW_004936567:3,269,355...3,331,460
JBrowse link
G Capn2 calpain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613415|PMID:14618389), (MGI:3618019|PMID:10949052) MGI
Ensembl
PMID:10949052 PMID:14618389 GO_REF:0000107 MGI:3613415 MGI:3618019 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682
JBrowse link
G Cast calpastatin ISO RGD PMID:12832042 RGD:1298731 NCBI chrNW_004936523:6,688,153...6,798,184
Ensembl chrNW_004936523:6,686,519...6,798,321
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3761450|PMID:14517320) MGI
Ensembl
PMID:14517320 GO_REF:0000107 MGI:3761450 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161
JBrowse link
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3521604|PMID:15520228) MGI
Ensembl
PMID:15520228 GO_REF:0000107 MGI:3521604 NCBI chrNW_004936572:6,176,267...6,268,885
Ensembl chrNW_004936572:6,176,255...6,272,260
JBrowse link
G Dock1 dedicator of cytokinesis 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:14,583,042...15,092,164
Ensembl chrNW_004936486:14,692,532...15,092,307
JBrowse link
G Dock2 dedicator of cytokinesis 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936609:4,695,202...5,099,038
Ensembl chrNW_004936609:4,695,628...5,099,038
JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936757:1,289,941...1,419,257
Ensembl chrNW_004936757:1,289,954...1,576,984
JBrowse link
G Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2678987|PMID:12902328) MGI
Ensembl
PMID:12902328 GO_REF:0000107 MGI:2678987 NCBI chrNW_004936661:2,436,702...2,444,758
Ensembl chrNW_004936661:2,433,483...2,444,752
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO (MGI:3522557|PMID:15282335) MGI PMID:15282335 MGI:3522557 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303
JBrowse link
G Ins insulin acts_upstream_of_or_within ISO (MGI:3522557|PMID:15282335) MGI PMID:15282335 MGI:3522557 NCBI chrNW_004936816:1,002,137...1,003,357
Ensembl chrNW_004936816:1,002,137...1,003,357
JBrowse link
G Myh9 myosin heavy chain 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3664529|PMID:16895968) MGI
Ensembl
PMID:16895968 GO_REF:0000107 MGI:3664529 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G Mymk myomaker, myoblast fusion factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:3,404,729...3,413,123
Ensembl chrNW_004936669:3,404,704...3,413,136
JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:15,863,807...15,864,357
Ensembl chrNW_004936476:15,863,807...15,864,161
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581114|PMID:15890200) MGI
Ensembl
PMID:15890200 GO_REF:0000107 MGI:3581114 NCBI chrNW_004936528:1,407,187...1,409,683
Ensembl chrNW_004936528:1,407,661...1,409,573
JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3521604|PMID:15520228) MGI
Ensembl
PMID:15520228 GO_REF:0000107 MGI:3521604 NCBI chrNW_004936471:32,345,578...32,517,245
Ensembl chrNW_004936471:32,292,745...32,516,624
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:495,421...514,179
Ensembl chrNW_004936570:494,971...513,874
JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3686567|PMID:16958127) MGI PMID:16958127 MGI:3686567 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Plekho1 pleckstrin homology domain containing O1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494518|PMID:22553210) MGI
Ensembl
PMID:22553210 GO_REF:0000107 MGI:5494518 NCBI chrNW_004936580:440,111...448,651
Ensembl chrNW_004936580:440,087...447,202
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5320842|PMID:22182840) MGI
Ensembl
PMID:22182840 GO_REF:0000107 MGI:5320842 NCBI chrNW_004936469:19,428,035...19,651,913
Ensembl chrNW_004936469:19,425,479...19,651,976
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522557|PMID:15282335) MGI
Ensembl
PMID:15282335 GO_REF:0000107 MGI:3522557 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
myoblast fusion involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800
JBrowse link
G Cd9 CD9 molecule involved_in ISO (MGI:6282938|PMID:23575678) UniProt PMID:23575678 MGI:6282938 NCBI chrNW_004936709:1,497,504...1,530,114 JBrowse link
G Mymk myomaker, myoblast fusion factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5608518|PMID:25085416) MGI
Ensembl
PMID:25085416 GO_REF:0000107 MGI:5608518 NCBI chrNW_004936669:3,404,729...3,413,123
Ensembl chrNW_004936669:3,404,704...3,413,136
JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:15,863,807...15,864,357
Ensembl chrNW_004936476:15,863,807...15,864,161
JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936627:2,069,066...2,108,526
Ensembl chrNW_004936627:2,069,336...2,110,336
JBrowse link
myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046122|PMID:15138196) MGI
Ensembl
PMID:15138196 GO_REF:0000107 MGI:3046122 NCBI chrNW_004936471:5,667,839...5,711,822
Ensembl chrNW_004936471:5,668,169...5,711,075
JBrowse link
G Flii FLII actin remodeling protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936741:1,784,802...1,796,176
Ensembl chrNW_004936741:1,783,589...1,796,168
JBrowse link
G Klhl41 kelch like family member 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:47,298...62,608
Ensembl chrNW_004936509:47,463...66,556
JBrowse link
G Lmod1 leiomodin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936567:2,557,090...2,598,069
Ensembl chrNW_004936567:2,557,080...2,596,818
JBrowse link
G Lmod2 leiomodin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,829,187...1,838,385
Ensembl chrNW_004936605:1,830,405...1,838,400
JBrowse link
G Lmod3 leiomodin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936603:1,510,330...1,520,741
Ensembl chrNW_004936603:1,510,330...1,520,911
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1354135|PMID:10712438) MGI PMID:10712438 MGI:1354135 NCBI chrNW_004936595:1,697,283...1,832,571
Ensembl chrNW_004936595:1,694,102...1,832,364
JBrowse link
G Myl9 myosin light chain 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936561:4,478,400...4,485,457
Ensembl chrNW_004936561:4,475,021...4,485,463
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chrNW_004936514:7,136,797...7,141,377
Ensembl chrNW_004936514:7,136,814...7,141,206
JBrowse link
G Pgm5 phosphoglucomutase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936503:4,696,473...4,858,561
Ensembl chrNW_004936503:4,696,467...4,858,561
JBrowse link
G Tmod1 tropomodulin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2683807|PMID:14657235) MGI
TreeGrafter
Ensembl
PMID:14657235 GO_REF:0000107 GO_REF:0000118 MGI:2683807 NCBI chrNW_004936524:6,347,089...6,403,996
Ensembl chrNW_004936524:6,326,400...6,403,057
JBrowse link
G Tmod2 tropomodulin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:13,602,769...13,636,258
Ensembl chrNW_004936471:13,602,732...13,729,228
JBrowse link
G Tmod3 tropomodulin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:13,652,532...13,729,311
Ensembl chrNW_004936471:13,602,732...13,729,228
JBrowse link
G Tmod4 tropomodulin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:1,375,184...1,380,423
Ensembl chrNW_004936580:1,375,173...1,380,423
JBrowse link
negative regulation of angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:23149556 RGD:12790979 NCBI chrNW_004936528:1,608,782...1,682,873
Ensembl chrNW_004936528:1,608,757...1,682,975
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10438512) MGI
Ensembl
PMID:10438512 GO_REF:0000107 NCBI chrNW_004936640:959,405...967,305
Ensembl chrNW_004936640:959,417...968,842
JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:14,835,621...14,870,815
Ensembl chrNW_004936474:14,835,602...14,870,821
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936618:783,363...1,453,620
Ensembl chrNW_004936618:786,816...1,455,747
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:22495178 RGD:7175062 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210
JBrowse link
G Agt angiotensinogen ISO RGD PMID:21281454 RGD:5129188 NCBI chrNW_004936484:19,713,299...19,721,144
Ensembl chrNW_004936484:19,716,165...19,721,261
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,807,914...7,848,691
Ensembl chrNW_004936554:7,808,355...7,867,931
JBrowse link
G Amot angiomotin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11257124) MGI
Ensembl
PMID:11257124 GO_REF:0000107 NCBI chrNW_004936499:2,594,190...2,661,307
Ensembl chrNW_004936499:2,594,239...2,661,359
JBrowse link
G Angpt2 angiopoietin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1202254|PMID:9204896) MGI
Ensembl
PMID:9204896 GO_REF:0000107 MGI:1202254 NCBI chrNW_004936615:4,472,261...4,524,537
Ensembl chrNW_004936615:4,472,247...4,524,556
JBrowse link
G Angpt4 angiopoietin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,675,948...17,710,512
Ensembl chrNW_004936485:17,675,948...17,710,272
JBrowse link
G Apoh apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:6,683,483...6,695,094
Ensembl chrNW_004936541:6,683,534...6,695,066
JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:944,825...1,039,920
Ensembl chrNW_004936567:950,797...993,245
JBrowse link
G Ccn6 cellular communication network factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12082632) MGI
Ensembl
PMID:12082632 GO_REF:0000107 NCBI chrNW_004936679:751,664...767,126
Ensembl chrNW_004936679:750,934...769,242
JBrowse link
G Cd160 CD160 molecule involved_in ISO (PMID:16809620) UniProt PMID:16809620 NCBI chrNW_004936867:478,625...485,905 JBrowse link
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:18772338 RGD:2307224 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365
JBrowse link
G Cldn5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:3,455,508...3,457,053
Ensembl chrNW_004936619:3,456,166...3,456,822
JBrowse link
G Cnmd chondromodulin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2656472|PMID:12714610)
(MGI:3690798|PMID:16980969)
MGI
TreeGrafter
Ensembl
PMID:12714610 PMID:16980969 GO_REF:0000107 GO_REF:0000118 MGI:2656472 MGI:3690798 NCBI chrNW_004936667:599,703...624,821
Ensembl chrNW_004936667:599,711...624,999
JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,270,836...2,416,324
Ensembl chrNW_004936472:2,270,819...2,416,349
JBrowse link
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (PMID:10766752), (PMID:12682293)
(MGI:3706481|PMID:16877525)
UniProt PMID:10766752 PMID:12682293 PMID:16877525 MGI:3706481 NCBI chrNW_004936525:8,642,744...8,774,975 JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 acts_upstream_of_or_within ISO (MGI:2180443|PMID:12032352) MGI PMID:12032352 MGI:2180443 NCBI chrNW_004936478:6,901,098...6,947,719
Ensembl chrNW_004936478:6,899,017...6,947,790
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 acts_upstream_of_or_within ISO (MGI:3777228|PMID:18322241) MGI PMID:18322241 MGI:3777228 NCBI chrNW_004936473:28,508,726...28,535,640
Ensembl chrNW_004936473:28,510,523...28,535,627
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO
IEA
RGD
Ensembl
PMID:9288136 GO_REF:0000107 RGD:2311389 NCBI chrNW_004936676:60,869...63,028
Ensembl chrNW_004936676:60,621...63,106
JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 involved_in ISO (PMID:12782716) UniProt PMID:12782716 NCBI chrNW_004936762:66,636...69,694
Ensembl chrNW_004936762:66,636...69,373
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174
JBrowse link
G Dcn decorin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23978385) MGI
Ensembl
PMID:23978385 GO_REF:0000107 NCBI chrNW_004936507:7,887,259...7,923,055
Ensembl chrNW_004936507:7,884,654...7,922,961
JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3845680|PMID:19416853)
(PMID:19416853)
MGI
TreeGrafter
Ensembl
PMID:19416853 GO_REF:0000107 GO_REF:0000118 MGI:3845680 NCBI chrNW_004936531:8,533,926...8,542,516
Ensembl chrNW_004936531:8,532,353...8,542,551
JBrowse link
G Efna3 ephrin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,613,847...4,622,834
Ensembl chrNW_004936580:4,613,847...4,621,208
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223
JBrowse link
G Epha2 EPH receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3847147|PMID:19443703) MGI
Ensembl
PMID:19443703 GO_REF:0000107 MGI:3847147 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861
JBrowse link
G Faslg Fas ligand involved_in ISO (PMID:18835034) BHF-UCL PMID:18835034 NCBI chrNW_004936481:14,789,547...14,795,780 JBrowse link
G Fbln5 fibulin 5 involved_in ISO (MGI:3822977|PMID:17607303) CACAO PMID:17607303 MGI:3822977 NCBI chrNW_004936733:136,374...200,106
Ensembl chrNW_004936733:137,207...209,473
JBrowse link
G Foxj2 forkhead box J2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936892:324,103...344,739
Ensembl chrNW_004936892:331,239...344,624
JBrowse link
G Foxo4 forkhead box O4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:495,271...501,278
Ensembl chrNW_004936762:493,910...501,531
JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,998,359...4,001,491
Ensembl chrNW_004936591:3,998,340...4,001,830
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3699048|PMID:17145776) MGI
Ensembl
PMID:17145776 GO_REF:0000107 MGI:3699048 NCBI chrNW_004936706:1,999,218...2,001,176
Ensembl chrNW_004936706:1,999,340...2,000,428
JBrowse link
G Gtf2i general transcription factor IIi acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19242469) MGI
Ensembl
PMID:19242469 GO_REF:0000107 NCBI chrNW_004936543:3,521,763...3,611,410
Ensembl chrNW_004936543:3,518,462...3,611,452
JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,285,678...5,301,267
Ensembl chrNW_004936594:5,285,551...5,301,233
JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (MGI:3777525|PMID:12588764)
PMID:15016828
BHF-UCL PMID:12588764 PMID:15016828 MGI:3777525 RGD:8554322 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857
JBrowse link
G Hoxa5 homeobox A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:3,768,757...3,771,850
Ensembl chrNW_004936478:3,769,258...3,771,840
JBrowse link
G Hrg histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:3,285,986...3,295,876
Ensembl chrNW_004936578:3,285,986...3,295,876
JBrowse link
G Il17f interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,579,282...8,580,916
Ensembl chrNW_004936476:8,574,387...8,580,916
JBrowse link
G Ism1 isthmin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:6,534,475...6,605,216
Ensembl chrNW_004936485:6,534,475...6,605,247
JBrowse link
G Klf4 KLF transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970
JBrowse link
G Krit1 KRIT1 ankyrin repeat containing involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936621:2,088,606...2,128,579
Ensembl chrNW_004936621:2,088,802...2,128,657
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO RGD PMID:16643897 RGD:2326157 NCBI chrNW_004936904:410,043...413,256
Ensembl chrNW_004936904:410,043...413,257
JBrowse link
G LOC101961563 neutrophilic granule protein-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,074,837...1,078,480 JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230
JBrowse link
G LOC101964770 C-C chemokine receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:285,559...287,198
Ensembl chrNW_004936596:285,559...286,680
JBrowse link
G LOC101967553 synaptojanin-2-binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914
JBrowse link
G LOC101975448 protein argonaute-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,398,996...18,436,001
Ensembl chrNW_004936474:18,399,011...18,436,001
JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839
JBrowse link
G Minar1 membrane integral NOTCH2 associated receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:37,573,475...37,607,329
Ensembl chrNW_004936471:37,573,464...37,610,833
JBrowse link
G Naxe NAD(P)HX epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,769,583...5,772,633
Ensembl chrNW_004936580:5,769,633...5,772,582
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629251|PMID:16648142) MGI
Ensembl
PMID:16648142 GO_REF:0000107 MGI:3629251 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Ngfr nerve growth factor receptor ISO RGD PMID:23920372 RGD:10413902 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263
JBrowse link
G Optc opticin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462009|PMID:22159013) MGI
Ensembl
PMID:22159013 GO_REF:0000107 MGI:5462009 NCBI chrNW_004936567:1,142,994...1,152,311
Ensembl chrNW_004936567:1,142,428...1,152,717
JBrowse link
G Pde3b phosphodiesterase 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:3,922,436...4,087,991
Ensembl chrNW_004936528:3,923,379...4,087,188
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936547:286,267...310,062
Ensembl chrNW_004936547:286,267...310,062
JBrowse link
G Plk2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:9,680,461...9,686,593
Ensembl chrNW_004936480:9,680,449...9,686,595
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3654795|PMID:16915281) MGI
Ensembl
PMID:16915281 GO_REF:0000107 MGI:3654795 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28566713) BHF-UCL PMID:28566713 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:17881084 RGD:2292001 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617
JBrowse link
G Ptprm protein tyrosine phosphatase receptor type M involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936670:890,316...1,692,033
Ensembl chrNW_004936670:890,310...1,692,041
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:32732889)
(MGI:7539456|PMID:32732889)
UniProt PMID:32732889 MGI:7539456 NCBI chrNW_004936489:13,901,066...14,000,652
Ensembl chrNW_004936489:13,901,754...13,999,983
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813
JBrowse link
G Rgcc regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936667:232,807...245,131
Ensembl chrNW_004936667:232,782...245,131
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:730,462...874,601
Ensembl chrNW_004936550:733,239...874,601
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244
JBrowse link
G Sars1 seryl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:747,109...766,981
Ensembl chrNW_004936704:746,775...771,305
JBrowse link
G Sema3e semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936734:1,850,709...2,085,541
Ensembl chrNW_004936734:1,850,673...2,084,891
JBrowse link
G Sema4a semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,404,380...5,431,183
Ensembl chrNW_004936580:5,406,194...5,431,185
JBrowse link
G Sema6a semaphorin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:1,599,725...1,726,084
Ensembl chrNW_004936742:1,599,723...1,661,013
JBrowse link
G Serpinf1 serpin family F member 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:7,885,816...7,898,308
Ensembl chrNW_004936538:7,885,475...7,899,113
JBrowse link
G Shc1 SHC adaptor protein 1 involved_in ISO (PMID:24177325) BHF-UCL PMID:24177325 NCBI chrNW_004936580:4,511,560...4,522,003
Ensembl chrNW_004936580:4,512,680...4,519,715
JBrowse link
G Sparc secreted protein acidic and cysteine rich involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:11,026,156...11,046,812
Ensembl chrNW_004936515:11,025,724...11,046,849
JBrowse link
G Spred1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:1,952,532...2,039,561
Ensembl chrNW_004936471:1,952,532...2,037,501
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:1,452,421...1,458,031 JBrowse link
G Stab1 stabilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,333,988...3,363,256
Ensembl chrNW_004936473:3,334,032...3,363,117
JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756
JBrowse link
G Sulf1 sulfatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:4,755,806...4,931,964
Ensembl chrNW_004936496:4,755,754...4,893,027
JBrowse link
G Tcf4 transcription factor 4 acts_upstream_of_or_within ISO (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chrNW_004936497:8,410,882...8,765,678
Ensembl chrNW_004936497:8,410,860...8,764,296
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Thbs1 thrombospondin 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:16150726)
(MGI:2449676|PMID:12498716)
(MGI:3603989|PMID:16150726)
RGD
TreeGrafter
Ensembl
MGI
PMID:12498716 PMID:16150726 PMID:18772338 GO_REF:0000107 GO_REF:0000118 MGI:2449676 MGI:3603989 RGD:2307224 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
G Thbs2 thrombospondin 2 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:11835157 PMID:12511771 GO_REF:0000107 GO_REF:0000118 RGD:1580067 RGD:1580070 NCBI chrNW_004936489:17,874,064...17,907,255
Ensembl chrNW_004936489:17,874,052...17,907,393
JBrowse link
G Thbs4 thrombospondin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:7,781,214...7,828,569
Ensembl chrNW_004936549:7,780,842...7,829,379
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2387759|PMID:9683559) MGI
Ensembl
PMID:9683559 GO_REF:0000107 MGI:2387759 NCBI chrNW_004936474:24,709,424...24,729,246
Ensembl chrNW_004936474:24,709,424...24,729,245
JBrowse link
G Tnmd tenomodulin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2656472|PMID:12714610) MGI
TreeGrafter
Ensembl
PMID:12714610 GO_REF:0000107 GO_REF:0000118 MGI:2656472 NCBI chrNW_004936584:5,803,309...5,818,643
Ensembl chrNW_004936584:5,803,309...5,818,647
JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3846280|PMID:19204325)
(PMID:20133819)
MGI
Ensembl
PMID:19204325 PMID:20133819 GO_REF:0000107 MGI:3846280 NCBI chrNW_004936488:5,675,788...5,696,198
Ensembl chrNW_004936488:5,675,782...5,696,222
JBrowse link
negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
JBrowse link
G Il12a interleukin 12A acts_upstream_of
involved_in
ISO
IEA
(PMID:30106099) ARUK-UCL
Ensembl
PMID:30106099 GO_REF:0000107 NCBI chrNW_004936519:6,166,060...6,180,652
Ensembl chrNW_004936519:6,175,261...6,180,396
JBrowse link
G Il12b interleukin 12B acts_upstream_of
involved_in
ISO
IEA
(PMID:30106099) ARUK-UCL
Ensembl
PMID:30106099 GO_REF:0000107 NCBI chrNW_004936515:4,056,214...4,066,121
Ensembl chrNW_004936515:4,056,214...4,065,076
JBrowse link
G Mmrn2 multimerin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:22,609...39,974
Ensembl chrNW_004936804:22,533...39,540
JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:23388056) UniProt PMID:23388056 NCBI chrNW_004936593:4,650,624...4,693,387
Ensembl chrNW_004936593:4,651,114...4,692,534
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
negative regulation of bone trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chad chondroadherin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5525032|PMID:23755099) MGI
Ensembl
PMID:23755099 GO_REF:0000107 MGI:5525032 NCBI chrNW_004936490:11,240,487...11,244,422
Ensembl chrNW_004936490:11,240,419...11,245,935
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO RGD PMID:32231239 RGD:32716373 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:32231239 RGD:32716373 NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
JBrowse link
negative regulation of cardiac chamber formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:2,769,264...2,778,342
Ensembl chrNW_004936490:2,769,231...2,805,238
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
negative regulation of cell adhesion involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema6a semaphorin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:1,599,725...1,726,084
Ensembl chrNW_004936742:1,599,723...1,661,013
JBrowse link
negative regulation of cell migration involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card10 caspase recruitment domain family member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,520,129...3,545,178
Ensembl chrNW_004936492:3,522,533...3,545,279
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
JBrowse link
G Hdac5 histone deacetylase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:561,721...598,915
Ensembl chrNW_004936541:558,414...599,195
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,802,761...5,814,226
Ensembl chrNW_004936532:5,799,342...5,814,199
JBrowse link
G Klf4 KLF transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970
JBrowse link
G Map2k5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chrNW_004936471:27,491,255...27,728,572
Ensembl chrNW_004936471:27,491,342...27,728,607
JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:2,239,442...2,304,099
Ensembl chrNW_004936546:2,239,442...2,304,099
JBrowse link
G Mmrn2 multimerin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:22,609...39,974
Ensembl chrNW_004936804:22,533...39,540
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:23388056) UniProt PMID:23388056 NCBI chrNW_004936593:4,650,624...4,693,387
Ensembl chrNW_004936593:4,651,114...4,692,534
JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 involved_in ISO PMID:25652288 BHF-UCL PMID:25652288 RGD:11053232 NCBI chrNW_004936596:3,010,526...3,021,848
Ensembl chrNW_004936596:3,010,488...3,021,920
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20208559) MGI
Ensembl
PMID:20208559 GO_REF:0000107 NCBI chrNW_004936529:1,000,050...1,045,655
Ensembl chrNW_004936529:999,935...1,045,681
JBrowse link
G Spred1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:1,952,532...2,039,561
Ensembl chrNW_004936471:1,952,532...2,037,501
JBrowse link
G Stard13 StAR related lipid transfer domain containing 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20208559) MGI
Ensembl
PMID:20208559 GO_REF:0000107 NCBI chrNW_004936472:27,683,939...28,158,362
Ensembl chrNW_004936472:27,683,923...27,741,339
JBrowse link
G Tbxa2r thromboxane A2 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,040,712...2,044,635
Ensembl chrNW_004936588:2,040,630...2,045,110
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5578117|PMID:25099998) MGI
Ensembl
PMID:25099998 GO_REF:0000107 MGI:5578117 NCBI chrNW_004936501:3,063,861...3,142,680
Ensembl chrNW_004936501:3,063,617...3,143,028
JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd7 frizzled class receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,256,684...1,275,324
Ensembl chrNW_004936726:1,256,678...1,275,467
JBrowse link
negative regulation of endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,474,381...2,613,541
Ensembl chrNW_004936669:2,476,818...2,580,891
JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,739,475...8,873,073
Ensembl chrNW_004936506:8,822,517...8,870,836
JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
negative regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,284,799...1,288,898
Ensembl chrNW_004936594:1,284,781...1,289,361
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
negative regulation of hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk4 dickkopf WNT signaling pathway inhibitor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3805070|PMID:18508042) MGI
Ensembl
PMID:18508042 GO_REF:0000107 MGI:3805070 NCBI chrNW_004936785:319,494...323,226
Ensembl chrNW_004936785:319,494...323,055
JBrowse link
negative regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 EPH receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3847147|PMID:19443703) MGI
Ensembl
PMID:19443703 GO_REF:0000107 MGI:3847147 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861
JBrowse link
G LOC101961563 neutrophilic granule protein-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,074,837...1,078,480 JBrowse link
G Vash1 vasohibin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20133819) Ensembl
MGI
PMID:20133819 GO_REF:0000107 NCBI chrNW_004936488:5,675,788...5,696,198
Ensembl chrNW_004936488:5,675,782...5,696,222
JBrowse link
negative regulation of macrophage fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:5462143|PMID:22865856) MGI PMID:22865856 MGI:5462143 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756
JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3711603|PMID:17462603) MGI
Ensembl
PMID:17462603 GO_REF:0000107 MGI:3711603 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
negative regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chrNW_004936726:381,888...425,565
Ensembl chrNW_004936726:381,835...423,311
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532227|PMID:23844157) MGI
Ensembl
PMID:23844157 GO_REF:0000107 MGI:5532227 NCBI chrNW_004936676:60,869...63,028
Ensembl chrNW_004936676:60,621...63,106
JBrowse link
G Il36g interleukin 36 gamma acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) MGI PMID:23844157 MGI:5532227 NCBI chrNW_004936783:1,355,562...1,359,524
Ensembl chrNW_004936783:1,354,955...1,360,519
JBrowse link
G Tmem182 transmembrane protein 182 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936713:1,383,371...1,436,213
Ensembl chrNW_004936713:1,383,371...1,436,206
JBrowse link
negative regulation of neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342
JBrowse link
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:283,207...290,970
Ensembl chrNW_004936823:283,205...290,986
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
negative regulation of platelet formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:18434589 RGD:151665814 NCBI chrNW_004936504:4,898,947...4,927,195
Ensembl chrNW_004936504:4,898,945...4,928,923
JBrowse link
negative regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934513|PMID:11401393)
(MGI:3785350|PMID:18393306)
MGI
Ensembl
PMID:11401393 PMID:18393306 GO_REF:0000107 MGI:1934513 MGI:3785350 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3612905|PMID:16324690) MGI
Ensembl
PMID:16324690 GO_REF:0000107 MGI:3612905 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Sulf1 sulfatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:4,755,806...4,931,964
Ensembl chrNW_004936496:4,755,754...4,893,027
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3822053|PMID:18804104) MGI
Ensembl
PMID:18804104 GO_REF:0000107 MGI:3822053 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:24777478 RGD:13204833 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556
JBrowse link
negative regulation of sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in ISO (MGI:4418720|PMID:20093484) BHF-UCL PMID:20093484 MGI:4418720 NCBI chrNW_004936637:1,787,987...1,946,250
Ensembl chrNW_004936637:1,788,276...1,942,833
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,807,914...7,848,691
Ensembl chrNW_004936554:7,808,355...7,867,931
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,739,908...2,772,484
Ensembl chrNW_004936562:2,739,905...2,772,484
JBrowse link
G E2f2 E2F transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,719,243...8,739,811
Ensembl chrNW_004936474:8,719,253...8,737,763
JBrowse link
G Epn1 epsin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936981:194,176...213,021
Ensembl chrNW_004936981:194,157...213,066
JBrowse link
G Epn2 epsin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936881:417,348...504,650
Ensembl chrNW_004936881:419,682...504,650
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:23804076 RGD:10402115 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G LOC101967553 synaptojanin-2-binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848
JBrowse link
G Sema6a semaphorin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:1,599,725...1,726,084
Ensembl chrNW_004936742:1,599,723...1,661,013
JBrowse link
G Sh2b3 SH2B adaptor protein 3 ISO RGD PMID:25628389 RGD:12904914 NCBI chrNW_004936558:4,103,898...4,126,883
Ensembl chrNW_004936558:4,104,534...4,123,869
JBrowse link
G Stard13 StAR related lipid transfer domain containing 13 acts_upstream_of_or_within ISO (MGI:4887522|PMID:20208559) MGI PMID:20208559 MGI:4887522 NCBI chrNW_004936472:27,683,939...28,158,362
Ensembl chrNW_004936472:27,683,923...27,741,339
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
G Znf879 zinc finger protein 879 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:1,665,595...1,704,963
Ensembl chrNW_004936739:1,687,832...1,703,542
Ensembl chrNW_004936739:1,687,832...1,703,542
JBrowse link
negative regulation of syncytium formation by plasma membrane fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101973720 rap guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,636,197...5,659,606
Ensembl chrNW_004936512:5,636,758...5,659,300
Ensembl chrNW_004936512:5,636,758...5,659,300
JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO (MGI:5049808|PMID:21558372) MGI PMID:21558372 MGI:5049808 NCBI chrNW_004936512:11,490,521...11,493,655
Ensembl chrNW_004936512:11,490,168...11,493,974
JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,807,914...7,848,691
Ensembl chrNW_004936554:7,808,355...7,867,931
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:6392927|PMID:28577991) ARUK-UCL PMID:28577991 MGI:6392927 NCBI chrNW_004936504:1,378,812...1,465,463
Ensembl chrNW_004936504:1,378,810...1,465,623
JBrowse link
G Tafa5 TAFA chemokine like family member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6380922|PMID:29453251) MGI
Ensembl
PMID:29453251 GO_REF:0000107 MGI:6380922 RGD:42721986 NCBI chrNW_004936629:1,781,169...1,906,215
Ensembl chrNW_004936629:1,781,156...1,906,221
JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430449|PMID:19913010) MGI
Ensembl
PMID:19913010 GO_REF:0000107 MGI:4430449 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714576|PMID:17537789) MGI
Ensembl
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178881|PMID:11948913) MGI
Ensembl
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chrNW_004936569:1,290,061...1,302,672
Ensembl chrNW_004936569:1,290,052...1,302,691
JBrowse link
neural crest cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772
JBrowse link
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4437369|PMID:20130188) MGI
Ensembl
PMID:20130188 GO_REF:0000107 MGI:4437369 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsc goosecoid homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936846:286,429...288,405
Ensembl chrNW_004936846:286,420...288,405
JBrowse link
neural crest cell migration involved in heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226
JBrowse link
neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in ISO (MGI:3721005|PMID:17685487) MGI PMID:17685487 MGI:3721005 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
G Kbtbd8 kelch repeat and BTB domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:44,960...60,494
Ensembl chrNW_004936603:44,948...54,255
JBrowse link
G Klhl12 kelch like family member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,681,421...1,714,150
Ensembl chrNW_004936567:1,680,286...1,716,235
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,676,540...3,686,674
Ensembl chrNW_004936600:3,676,314...3,686,763
JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:1,129,367...1,144,020
Ensembl chrNW_004936815:1,129,352...1,143,992
JBrowse link
G Pef1 penta-EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:14,745,812...14,761,279
Ensembl chrNW_004936474:14,745,677...14,761,395
JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,533,993...4,569,997
Ensembl chrNW_004936504:4,533,981...4,570,055
JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Luzp1 leucine zipper protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3818102|PMID:18801334) MGI
TreeGrafter
Ensembl
PMID:18801334 GO_REF:0000107 GO_REF:0000118 MGI:3818102 NCBI chrNW_004936474:8,320,284...8,413,919
Ensembl chrNW_004936474:8,324,076...8,328,829
JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1337194|PMID:10328919) MGI
Ensembl
PMID:10328919 GO_REF:0000107 MGI:1337194 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 acts_upstream_of_or_within ISO (MGI:3530675|PMID:15649475) MGI PMID:15649475 MGI:3530675 NCBI chrNW_004936599:3,678,724...3,682,314
Ensembl chrNW_004936599:3,677,804...3,682,307
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chrNW_004936596:1,958,961...2,074,471
Ensembl chrNW_004936596:1,958,844...2,074,707
JBrowse link
G LOC101956240 cat eye syndrome critical region protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4880797|PMID:21246654) MGI
Ensembl
PMID:21246654 GO_REF:0000107 MGI:4880797 NCBI chrNW_004936807:498,491...542,503
Ensembl chrNW_004936807:498,789...542,008
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155575|PMID:11311163) MGI
Ensembl
PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618450|PMID:16423343) MGI
Ensembl
PMID:16423343 GO_REF:0000107 MGI:3618450 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540
JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (MGI:73644|PMID:7774020) MGI PMID:7774020 MGI:73644 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1327082|PMID:9883720) MGI
Ensembl
PMID:9883720 GO_REF:0000107 MGI:1327082 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:1327082 NCBI chrNW_004936481:9,823,790...9,847,291
Ensembl chrNW_004936481:9,824,392...9,847,104
JBrowse link
G Adm adrenomedullin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3689296|PMID:16981008) MGI
Ensembl
PMID:16981008 GO_REF:0000107 MGI:3689296 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643
JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:81193|PMID:8673125) MGI PMID:8673125 MGI:81193 NCBI chrNW_004936507:2,775,752...2,797,065
Ensembl chrNW_004936507:2,775,752...2,797,062
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149166|PMID:11504943), (MGI:893797|PMID:9216040) MGI
Ensembl
PMID:9216040 PMID:11504943 GO_REF:0000107 MGI:2149166 MGI:893797 NCBI chrNW_004936492:14,818,561...14,902,231
Ensembl chrNW_004936492:14,816,623...14,902,132
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1926242|PMID:11044403) MGI
Ensembl
PMID:11044403 GO_REF:0000107 MGI:1926242 NCBI chrNW_004936664:714,036...788,584
Ensembl chrNW_004936664:713,984...789,344
JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:5466629|PMID:23129809) MGI PMID:23129809 MGI:5466629 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3607949|PMID:16170314) MGI
Ensembl
PMID:16170314 GO_REF:0000107 MGI:3607949 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712
JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Brd2 bromodomain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6120662|PMID:19362612) MGI
Ensembl
PMID:19362612 GO_REF:0000107 MGI:6120662 NCBI chrNW_004936476:25,807,179...25,818,914
Ensembl chrNW_004936476:25,807,163...25,818,899
JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5696765|PMID:24947469) MGI
Ensembl
PMID:24947469 GO_REF:0000107 MGI:5696765 NCBI chrNW_004936477:12,315,829...12,415,915
Ensembl chrNW_004936477:12,315,799...12,408,603
JBrowse link
G Cdk20 cyclin dependent kinase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5912686|PMID:28817564) MGI
Ensembl
PMID:28817564 GO_REF:0000107 MGI:5912686 NCBI chrNW_004936854:810,996...817,136
Ensembl chrNW_004936854:812,575...817,202
JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703464|PMID:17229766) Ensembl
MGI
PMID:17229766 GO_REF:0000107 MGI:3703464 NCBI chrNW_004936629:3,453,384...3,570,250
Ensembl chrNW_004936629:3,455,887...3,568,566
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2384266|PMID:12149478) MGI
Ensembl
PMID:12149478 GO_REF:0000107 MGI:2384266 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509110|PMID:23742838) MGI
Ensembl
PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chrNW_004936694:779,399...810,534
Ensembl chrNW_004936694:780,197...810,457
JBrowse link
G Cobl cordon-bleu WH2 repeat protein acts_upstream_of_or_within ISO (MGI:2676511|PMID:14512015) MGI PMID:14512015 MGI:2676511 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chrNW_004936888:473,651...497,152
Ensembl chrNW_004936888:473,974...497,158
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (MGI:3529660|PMID:15710412) MGI PMID:15710412 MGI:3529660 NCBI chrNW_004936573:2,493,051...2,658,396
Ensembl chrNW_004936573:2,492,875...2,658,714
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2389015|PMID:12421720) MGI
Ensembl
PMID:12421720 GO_REF:0000107 MGI:2389015 NCBI chrNW_004936595:520,299...528,361
Ensembl chrNW_004936595:520,548...528,371
JBrowse link
G Enah ENAH actin regulator acts_upstream_of_or_within ISO (MGI:3054149|PMID:15371503)
(MGI:1331576|PMID:10069337)
MGI PMID:10069337 PMID:15371503 MGI:1331576 MGI:3054149 NCBI chrNW_004936526:2,332,344...2,477,827
Ensembl chrNW_004936526:2,332,664...2,477,833
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367921|PMID:19877275) MGI
Ensembl
PMID:19877275 GO_REF:0000107 MGI:4367921 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342
JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3616416|PMID:16495441) MGI
Ensembl
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chrNW_004936675:1,275,500...1,334,878
Ensembl chrNW_004936675:1,275,470...1,333,540
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3616416|PMID:16495441) MGI
Ensembl
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chrNW_004936470:40,416,254...40,454,717
Ensembl chrNW_004936470:40,416,014...40,454,062
JBrowse link
G Glmn glomulin, FKBP associated protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5320488|PMID:22405651) MGI
Ensembl
PMID:22405651 GO_REF:0000107 MGI:5320488 NCBI chrNW_004936537:6,778,317...6,827,384
Ensembl chrNW_004936537:6,777,965...6,829,881
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4947318|PMID:21262862) MGI
Ensembl
PMID:21262862 GO_REF:0000107 MGI:4947318 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844
JBrowse link
G Grhl3 grainyhead like transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:9,321,754...9,354,486
Ensembl chrNW_004936474:9,332,444...9,353,893
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804)
(MGI:3714713|PMID:17442300)
MGI
UniProt
PMID:9636176 PMID:15755804 PMID:17442300 MGI:1267118 MGI:3577662 MGI:3714713 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952
JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chrNW_004936602:908,034...956,634
Ensembl chrNW_004936602:905,486...956,521
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828200|PMID:18930042) MGI
Ensembl
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160
JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703110|PMID:17027958) MGI
Ensembl
PMID:17027958 GO_REF:0000107 MGI:3703110 NCBI chrNW_004936645:1,471,393...1,524,193
Ensembl chrNW_004936645:1,468,375...1,524,238
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709911|PMID:17325035) MGI
Ensembl
PMID:17325035 GO_REF:0000107 MGI:3709911 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489
JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623
JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5448135|PMID:22949634) MGI
Ensembl
PMID:22949634 GO_REF:0000107 MGI:5448135 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Kif20b kinesin family member 20B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577662|PMID:15755804) MGI
Ensembl
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chrNW_004936601:4,457,142...4,517,693
Ensembl chrNW_004936601:4,456,724...4,516,135
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2154554|PMID:11719201) MGI
Ensembl
PMID:11719201 GO_REF:0000107 MGI:2154554 NCBI chrNW_004936487:12,395,817...12,413,860
Ensembl chrNW_004936487:12,395,812...12,414,003
JBrowse link
G Lias lipoic acid synthetase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577662|PMID:15755804) MGI
Ensembl
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chrNW_004936482:7,068,326...7,085,571
Ensembl chrNW_004936482:7,068,445...7,084,504
JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3573996|PMID:15691703)
(MGI:3029621|PMID:14966285)
MGI
Ensembl
PMID:14966285 PMID:15691703 GO_REF:0000107 MGI:3029621 MGI:3573996 NCBI chrNW_004936732:1,541,511...1,557,845
Ensembl chrNW_004936732:1,541,515...1,555,735
JBrowse link
G LOC101956240 cat eye syndrome critical region protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4822542|PMID:20589882)
(MGI:3530173|PMID:15640247)
(MGI:4880797|PMID:21246654)
MGI
Ensembl
PMID:15640247 PMID:20589882 PMID:21246654 GO_REF:0000107 MGI:3530173 MGI:4822542 MGI:4880797 NCBI chrNW_004936807:498,491...542,503
Ensembl chrNW_004936807:498,789...542,008
JBrowse link
G LOC101973767 vasodilator stimulated phosphoprotein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054149|PMID:15371503) MGI
TreeGrafter
PMID:15371503 GO_REF:0000118 MGI:3054149 NCBI chrNW_004936706:1,923,172...1,945,046
Ensembl chrNW_004936706:1,923,602...1,928,630
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3055483|PMID:15469977)
(MGI:4830282|PMID:19056682)
(MGI:1347661|PMID:10545599)
(MGI:4413372|PMID:19795512)
(MGI:4413396|PMID:19653321)
MGI PMID:10545599 PMID:15469977 PMID:19056682 PMID:19653321 PMID:19795512 MGI:1347661 MGI:3055483 MGI:4413372 MGI:4413396 MGI:4830282 MGI:61254 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4839483|PMID:20630950) MGI
Ensembl
PMID:20630950 GO_REF:0000107 MGI:4839483 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195
JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5487695|PMID:23454480)
(MGI:4367169|PMID:19776033)
MGI
Ensembl
PMID:19776033 PMID:23454480 GO_REF:0000107 MGI:4367169 MGI:5487695 NCBI chrNW_004936490:4,865,243...4,876,601
Ensembl chrNW_004936490:4,865,243...4,878,912
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:3,877,423...4,060,129
Ensembl chrNW_004936489:3,876,680...4,051,933
JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of
involved_in
ISO
IEA
(PMID:25855017), (PMID:29222906) BHF-UCL
Ensembl
PMID:25855017 PMID:29222906 GO_REF:0000107 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193
JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chrNW_004936509:11,525,764...11,624,833
Ensembl chrNW_004936509:11,524,556...11,624,621
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640733|PMID:16712836) Ensembl
MGI
PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577662|PMID:15755804) MGI
Ensembl
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chrNW_004936711:1,027,531...1,113,796
Ensembl chrNW_004936711:1,032,935...1,106,847
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815
JBrowse link
G Pfn1 profilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331576|PMID:10069337) MGI
Ensembl
PMID:10069337 GO_REF:0000107 MGI:1331576 NCBI chrNW_004936677:2,762,971...2,766,038
Ensembl chrNW_004936677:2,762,971...2,766,149
JBrowse link
G Phactr4 phosphatase and actin regulator 4 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936474:12,517,800...12,613,170
Ensembl chrNW_004936474:12,517,765...12,614,968
JBrowse link
G Plxnb2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:521,981...539,475
Ensembl chrNW_004936629:525,649...538,743
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5308523|PMID:22007132) MGI
Ensembl
PMID:22007132 GO_REF:0000107 MGI:5308523 NCBI chrNW_004936659:2,750,015...2,765,914
Ensembl chrNW_004936659:2,750,537...2,765,753
JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5308523|PMID:22007132) MGI
Ensembl
PMID:22007132 GO_REF:0000107 MGI:5308523 NCBI chrNW_004936608:1,353,905...1,464,636
Ensembl chrNW_004936608:1,353,897...1,464,636
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095757|PMID:9262482) MGI
Ensembl
PMID:9262482 GO_REF:0000107 MGI:1095757 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046397|PMID:15229603)
(MGI:4830023|PMID:20704721)
MGI
Ensembl
PMID:15229603 PMID:20704721 GO_REF:0000107 MGI:3046397 MGI:4830023 NCBI chrNW_004936476:16,797,836...16,866,989
Ensembl chrNW_004936476:16,798,686...16,866,896
JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in
acts_upstream_of_or_within
ISO (MGI:69552|PMID:7720556)
(MGI:1267118|PMID:9636176)
UniProt
MGI
PMID:7720556 PMID:9636176 MGI:1267118 MGI:69552 NCBI chrNW_004936476:4,095,829...4,127,714
Ensembl chrNW_004936476:4,095,329...4,127,701
JBrowse link
G Rala RAS like proto-oncogene A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:15,167,651...15,186,594
Ensembl chrNW_004936478:15,167,751...15,186,633
JBrowse link
G Rara retinoic acid receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69060|PMID:7607067) MGI
Ensembl
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611
JBrowse link
G Rarg retinoic acid receptor gamma acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69060|PMID:7607067) MGI
Ensembl
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chrNW_004936512:10,502,954...10,524,796
Ensembl chrNW_004936512:10,500,622...10,524,824
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3027667|PMID:14749425) MGI
Ensembl
PMID:14749425 GO_REF:0000107 MGI:3027667 NCBI chrNW_004936483:9,753,112...9,792,817
Ensembl chrNW_004936483:9,766,275...9,793,001
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO (MGI:3703464|PMID:17229766) MGI PMID:17229766 MGI:3703464 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244
JBrowse link
G Rps7 ribosomal protein S7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056222|PMID:15384171) MGI
Ensembl
PMID:15384171 GO_REF:0000107 MGI:3056222 NCBI chrNW_004936532:1,734,993...1,740,202
Ensembl chrNW_004936532:1,734,983...1,742,151
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3698636|PMID:16790473) MGI PMID:16790473 MGI:3698636 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413
JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (MGI:3698636|PMID:16790473) MGI PMID:16790473 MGI:3698636 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819429|PMID:20643356)
(MGI:5050793|PMID:21515572)
MGI
Ensembl
PMID:20643356 PMID:21515572 GO_REF:0000107 MGI:4819429 MGI:5050793 NCBI chrNW_004936470:8,349,175...8,370,099
Ensembl chrNW_004936470:8,349,188...8,369,864
JBrowse link
G Sdc4 syndecan 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5498591|PMID:23760952) MGI
Ensembl
PMID:23760952 GO_REF:0000107 MGI:5498591 NCBI chrNW_004936514:7,528,538...7,562,391
Ensembl chrNW_004936514:7,555,685...7,562,391
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439427|PMID:20215345)
(MGI:4438817|PMID:19966784)
MGI
Ensembl
PMID:19966784 PMID:20215345 GO_REF:0000107 MGI:4438817 MGI:4439427 NCBI chrNW_004936563:676,564...772,877
Ensembl chrNW_004936563:712,029...772,101
JBrowse link
G Sema4c semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:794,127...804,618
Ensembl chrNW_004936744:793,898...804,642
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4431136|PMID:20133625) MGI
Ensembl
PMID:20133625 GO_REF:0000107 MGI:4431136 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Shroom3 shroom family member 3 acts_upstream_of_or_within ISO (MGI:3610718|PMID:16249236) MGI PMID:16249236 MGI:3610718 NCBI chrNW_004936676:533,654...703,549
Ensembl chrNW_004936676:409,926...703,839
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:1095997 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4360135|PMID:19592578) MGI
Ensembl
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chrNW_004936471:4,238,883...4,251,291
Ensembl chrNW_004936471:4,238,845...4,251,350
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4360135|PMID:19592578) MGI
Ensembl
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chrNW_004936801:1,041,946...1,069,617
Ensembl chrNW_004936801:1,041,708...1,069,776
JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4360135|PMID:19592578) MGI
Ensembl
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chrNW_004936572:2,137,820...2,182,674
Ensembl chrNW_004936572:2,137,332...2,182,742
JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (MGI:1339521|PMID:10385121) MGI PMID:10385121 MGI:1339521 NCBI chrNW_004936474:28,079,114...28,131,214
Ensembl chrNW_004936474:28,079,492...28,131,198
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3604917|PMID:16155214) MGI
Ensembl
PMID:16155214 GO_REF:0000107 MGI:3604917 NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3701028|PMID:16835439) MGI
Ensembl
PMID:16835439 GO_REF:0000107 MGI:3701028 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
JBrowse link
G Tead2 TEA domain transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3763398|PMID:17868131) MGI
Ensembl
PMID:17868131 GO_REF:0000107 MGI:3763398 NCBI chrNW_004936664:3,242,815...3,257,649
Ensembl chrNW_004936664:3,242,974...3,255,856
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866), (MGI:80519|PMID:8622766) MGI PMID:8622766 PMID:9811866 MGI:1313057 MGI:80519 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:3697552|PMID:17082251) MGI PMID:17082251 MGI:3697552 NCBI chrNW_004936672:1,128,104...1,135,844
Ensembl chrNW_004936672:1,128,108...1,136,292
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4453264|PMID:20178780) MGI
Ensembl
PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120
JBrowse link
G Trim71 tripartite motif containing 71 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4356244|PMID:19098426) MGI
Ensembl
PMID:19098426 GO_REF:0000107 MGI:4356244 NCBI chrNW_004936473:23,223,984...23,290,177
Ensembl chrNW_004936473:23,224,588...23,290,169
JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2137425|PMID:11438694) MGI
Ensembl
PMID:11438694 GO_REF:0000107 MGI:2137425 NCBI chrNW_004936487:19,331,183...19,386,841
Ensembl chrNW_004936487:19,331,194...19,386,892
JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (MGI:1333508|PMID:10096549) MGI PMID:10096549 MGI:1333508 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3841513|PMID:19223390) MGI
Ensembl
PMID:19223390 GO_REF:0000107 MGI:3841513 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:72096|PMID:7729687) MGI
Ensembl
PMID:7729687 GO_REF:0000107 MGI:72096 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3046397|PMID:15229603)
(MGI:5498591|PMID:23760952)
(MGI:3714704|PMID:17433286)
(MGI:2153976|PMID:11709546), (MGI:2449213|PMID:12499390)
(MGI:2676511|PMID:14512015)
(MGI:3703464|PMID:17229766)
(MGI:4880797|PMID:21246654)
(MGI:4438817|PMID:19966784)
MGI PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 More... MGI:2153976 MGI:2449213 MGI:2676511 MGI:3046397 MGI:3703464 MGI:3714704 MGI:4438817 MGI:4880797 MGI:5498591 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601
JBrowse link
G Wdr83 WD repeat domain 83 acts_upstream_of_or_within ISO (MGI:7515163|PMID:37509073) MGI PMID:37509073 MGI:7515163 NCBI chrNW_004936659:1,796,030...1,803,714
Ensembl chrNW_004936659:1,796,067...1,803,683
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512)
(MGI:3714704|PMID:17433286)
MGI
Ensembl
PMID:17433286 PMID:19795512 GO_REF:0000107 MGI:3714704 MGI:4413372 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:3624924|PMID:16598713) MGI PMID:16598713 MGI:3624924 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191
JBrowse link
G Zic5 Zic family member 5 acts_upstream_of_or_within ISO (MGI:3051968|PMID:15136147) MGI PMID:15136147 MGI:3051968 NCBI chrNW_004936472:10,615,843...10,623,221
Ensembl chrNW_004936472:10,616,122...10,622,338
JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brpf1 bromodomain and PHD finger containing 1 acts_upstream_of_or_within ISO (MGI:5806011|PMID:27528195) MGI PMID:27528195 MGI:5806011 NCBI chrNW_004936602:3,419,873...3,436,119
Ensembl chrNW_004936602:3,420,445...3,436,119
JBrowse link
G Casp8 caspase 8 acts_upstream_of_or_within ISO (MGI:3609631|PMID:12404118) MGI PMID:12404118 MGI:3609631 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179743|PMID:11694877) MGI
Ensembl
PMID:11694877 GO_REF:0000107 MGI:2179743 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:2154585|PMID:11716496) MGI PMID:11716496 MGI:2154585 NCBI chrNW_004936501:5,035,986...5,043,864
Ensembl chrNW_004936501:5,034,224...5,043,909
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679893|PMID:14603322) MGI
Ensembl
PMID:14603322 GO_REF:0000107 MGI:2679893 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160
JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3579954|PMID:15930098) MGI
Ensembl
PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chrNW_004936530:2,965,587...3,003,758
Ensembl chrNW_004936530:2,967,533...3,003,980
JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (MGI:3583505|PMID:15939867) MGI PMID:15939867 MGI:3583505 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (MGI:3607973|PMID:16260493) MGI PMID:16260493 MGI:3607973 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3603078|PMID:16000382) MGI
Ensembl
PMID:16000382 GO_REF:0000107 MGI:3603078 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637
JBrowse link
G Nup50 nucleoporin 50 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1860670|PMID:10891500) MGI
Ensembl
PMID:10891500 GO_REF:0000107 MGI:1860670 NCBI chrNW_004936629:4,499,105...4,511,437
Ensembl chrNW_004936629:4,496,720...4,511,399
JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:8124714 RGD:69996 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412133|PMID:19786569) MGI
Ensembl
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chrNW_004936470:44,159,449...44,436,295
Ensembl chrNW_004936470:44,159,419...44,436,330
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412133|PMID:19786569) MGI
Ensembl
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chrNW_004936514:7,686,760...7,784,948
Ensembl chrNW_004936514:7,686,087...7,785,025
JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610767|PMID:16357211) MGI
Ensembl
PMID:16357211 GO_REF:0000107 MGI:3610767 NCBI chrNW_004936558:3,552,909...3,581,212
Ensembl chrNW_004936558:3,552,864...3,581,368
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136130|PMID:11406614) MGI
Ensembl
PMID:11406614 GO_REF:0000107 MGI:2136130 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563
JBrowse link
nipple sheath formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone like hormone acts_upstream_of_or_within ISO (MGI:1203302|PMID:9477327) MGI PMID:9477327 MGI:1203302 NCBI chrNW_004936760:197,525...209,212
Ensembl chrNW_004936760:197,525...209,518
JBrowse link
Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4438134|PMID:19620969) MGI
Ensembl
PMID:19620969 GO_REF:0000107 MGI:4438134 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
notochord formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs cell polarity complex component 2 involved_in IEA
ISS
Ensembl
CAFA
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934
JBrowse link
G Efna1 ephrin A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934524|PMID:11287184) MGI
Ensembl
PMID:11287184 GO_REF:0000107 MGI:1934524 NCBI chrNW_004936580:4,654,503...4,660,950
Ensembl chrNW_004936580:4,654,503...4,660,966
JBrowse link
G Epha2 EPH receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934524|PMID:11287184) MGI
Ensembl
PMID:11287184 GO_REF:0000107 MGI:1934524 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:77191|PMID:7589801) MGI
Ensembl
PMID:7589801 GO_REF:0000107 MGI:77191 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
JBrowse link
oculomotor nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired like homeobox 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,539,939...1,544,469
Ensembl chrNW_004936498:1,540,484...1,544,360
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (MGI:80519|PMID:8622766) UniProt PMID:8622766 MGI:80519 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
olfactory nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna1 plexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:951,138...989,955
Ensembl chrNW_004936798:952,428...989,894
JBrowse link
G Plxna3 plexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,209,787...1,226,726
Ensembl chrNW_004936809:1,209,743...1,226,728
JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chrNW_004936481:18,607,212...18,679,828
Ensembl chrNW_004936481:18,617,572...18,678,183
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
JBrowse link
G Six4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613
JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:5466629|PMID:23129809) MGI PMID:23129809 MGI:5466629 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:3624188|PMID:16611695) MGI PMID:16611695 MGI:3624188 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624188|PMID:16611695) MGI
Ensembl
PMID:16611695 GO_REF:0000107 MGI:3624188 NCBI chrNW_004936483:2,930,781...2,967,309
Ensembl chrNW_004936483:2,930,789...2,967,346
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha involved_in ISO (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
organ induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1306869|PMID:9806931) MGI
Ensembl
PMID:9806931 GO_REF:0000107 MGI:1306869 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Fgf1 fibroblast growth factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3511765|PMID:15576401) MGI
Ensembl
PMID:15576401 GO_REF:0000107 MGI:3511765 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662946|PMID:12810586)
PMID:10964474
MGI
Ensembl
PMID:10964474 PMID:12810586 GO_REF:0000107 MGI:2662946 RGD:8554722 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (MGI:2662946|PMID:12810586)
(MGI:3530177|PMID:15741321)
MGI PMID:12810586 PMID:15741321 MGI:2662946 MGI:3530177 NCBI chrNW_004936599:868,634...875,464
Ensembl chrNW_004936599:868,634...875,464
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530177|PMID:15741321) MGI
Ensembl
PMID:15741321 GO_REF:0000107 MGI:3530177 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3511765|PMID:15576401) MGI
Ensembl
PMID:15576401 GO_REF:0000107 MGI:3511765 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (MGI:3511765|PMID:15576401) MGI PMID:15576401 MGI:3511765 NCBI chrNW_004936597:1,388,394...1,397,731
Ensembl chrNW_004936597:1,385,624...1,397,758
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513737|PMID:15569927) MGI
Ensembl
PMID:15569927 GO_REF:0000107 MGI:3513737 NCBI chrNW_004936545:7,286,018...7,407,623
Ensembl chrNW_004936545:7,396,023...7,407,637
JBrowse link
G Gdnf glial cell derived neurotrophic factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530708|PMID:15691764) MGI
Ensembl
PMID:15691764 GO_REF:0000107 MGI:3530708 NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
JBrowse link
G Hoxa11 homeobox A11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3036921|PMID:12050119) Ensembl
MGI
PMID:12050119 GO_REF:0000107 MGI:3036921 NCBI chrNW_004936478:3,809,288...3,813,014
Ensembl chrNW_004936478:3,809,288...3,813,014
JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3036921|PMID:12050119) MGI
Ensembl
PMID:12050119 GO_REF:0000107 MGI:3036921 NCBI chrNW_004936512:11,194,876...11,197,316
Ensembl chrNW_004936512:11,194,876...11,197,316
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662002|PMID:12783782) MGI
Ensembl
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530708|PMID:15691764) MGI
Ensembl
PMID:15691764 GO_REF:0000107 MGI:3530708 NCBI chrNW_004936662:2,241,928...2,245,616
Ensembl chrNW_004936662:2,243,326...2,244,291
JBrowse link
osteoclast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd109 CD109 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5508870|PMID:23593435) MGI
Ensembl
PMID:23593435 GO_REF:0000107 MGI:5508870 NCBI chrNW_004936859:467,958...595,337
Ensembl chrNW_004936859:484,923...595,316
JBrowse link
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800
JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5522615|PMID:23980096) MGI
Ensembl
PMID:23980096 GO_REF:0000107 MGI:5522615 NCBI chrNW_004936470:39,664,573...39,671,532
Ensembl chrNW_004936470:39,664,511...39,671,532
JBrowse link
G Sbno2 strawberry notch homolog 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5522615|PMID:23980096) MGI
Ensembl
PMID:23980096 GO_REF:0000107 MGI:5522615 NCBI chrNW_004936588:509,244...556,424
Ensembl chrNW_004936588:505,948...541,831
JBrowse link
G Sh3pxd2a SH3 and PX domains 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:2,343,709...2,513,497
Ensembl chrNW_004936600:2,343,658...2,509,612
JBrowse link
G Tcta T cell leukemia translocation altered involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,045,735...1,047,922
Ensembl chrNW_004936529:1,045,798...1,050,384
JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2683889|PMID:14623822) MGI
Ensembl
PMID:14623822 GO_REF:0000107 MGI:2683889 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (MGI:3720541|PMID:17601531) MGI PMID:17601531 MGI:3720541 NCBI chrNW_004936599:868,634...875,464
Ensembl chrNW_004936599:868,634...875,464
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3720541|PMID:17601531) MGI
Ensembl
PMID:17601531 GO_REF:0000107 MGI:3720541 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:1197797|PMID:9435295) MGI PMID:9435295 MGI:1197797 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1206234|PMID:9620767) MGI
Ensembl
PMID:9620767 GO_REF:0000107 MGI:1206234 NCBI chrNW_004936473:7,545,982...7,572,222
Ensembl chrNW_004936473:7,545,839...7,548,013
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3795349|PMID:18377888) Ensembl
MGI
PMID:18377888 GO_REF:0000107 MGI:3795349 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Tcap titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO RGD PMID:16687515 RGD:1599119 NCBI chrNW_004936563:3,520,195...4,170,716
Ensembl chrNW_004936563:3,520,193...4,171,362
JBrowse link
G Cd9 CD9 molecule involved_in ISO (MGI:3027661|PMID:14715942) UniProt PMID:14715942 MGI:3027661 NCBI chrNW_004936709:1,497,504...1,530,114 JBrowse link
G Cntnap1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,412,837...17,430,123
Ensembl chrNW_004936490:17,412,878...17,429,041
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO (MGI:5296417|PMID:21966409) BHF-UCL PMID:21966409 MGI:5296417 NCBI chrNW_004936779:962,696...1,106,452
Ensembl chrNW_004936779:1,016,265...1,104,070
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3843561|PMID:19270340) MGI
Ensembl
PMID:19270340 GO_REF:0000107 MGI:3843561 NCBI chrNW_004936484:19,414,094...19,434,929
Ensembl chrNW_004936484:19,410,956...19,434,929
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
ISO (MGI:3621515|PMID:16337912)
(MGI:3836161|PMID:19185024)
(MGI:4452171|PMID:20371806)
MGI
UniProt
PMID:16337912 PMID:19185024 PMID:20371806 MGI:3621515 MGI:3836161 MGI:4452171 NCBI chrNW_004936557:7,345,813...7,437,654
Ensembl chrNW_004936557:7,350,114...7,437,722
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:3613258|PMID:16436605) MGI PMID:16436605 MGI:3613258 NCBI chrNW_004936724:1,747,015...1,780,298
Ensembl chrNW_004936724:1,747,005...1,778,141
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936563:5,251,451...5,305,683
Ensembl chrNW_004936563:5,224,173...5,306,120
JBrowse link
paraxial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2150572|PMID:11562355) MGI
Ensembl
PMID:11562355 GO_REF:0000107 MGI:2150572 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334099|PMID:10090727) MGI
Ensembl
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334099|PMID:10090727) MGI
Ensembl
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (MGI:3609520|PMID:16109169) MGI PMID:16109169 MGI:3609520 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
G LOC101974301 exocyst complex component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:2,201,947...2,424,200
Ensembl chrNW_004936579:1,644,164...2,424,248
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5634837|PMID:25813538) MGI
Ensembl
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chrNW_004936498:4,909,041...4,927,482
Ensembl chrNW_004936498:4,908,978...4,927,165
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5634837|PMID:25813538) MGI
Ensembl
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:86990|PMID:9106663) MGI
Ensembl
PMID:9106663 GO_REF:0000107 MGI:86990 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:86727|PMID:9126297) MGI
Ensembl
PMID:9126297 GO_REF:0000107 MGI:86727 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423
JBrowse link
peripheral nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III involved_in ISO (MGI:4454581|PMID:20463238), (MGI:4830414|PMID:20805985) BHF-UCL PMID:20463238 PMID:20805985 MGI:4454581 MGI:4830414 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Itgb4 integrin subunit beta 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6155489|PMID:29315582) MGI
Ensembl
PMID:29315582 GO_REF:0000107 MGI:6155489 NCBI chrNW_004936594:912,302...944,819
Ensembl chrNW_004936594:912,291...946,012
JBrowse link
G Ncmap non-compact myelin associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:9,507,203...9,538,969
Ensembl chrNW_004936474:9,507,150...9,539,543
JBrowse link
G Prx periaxin involved_in ISO (MGI:1859096|PMID:10839370) UniProt PMID:10839370 MGI:1859096 NCBI chrNW_004936661:2,772,446...2,783,120
Ensembl chrNW_004936661:2,772,621...2,787,647
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4830023|PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 MGI:4830023 NCBI chrNW_004936629:3,453,384...3,570,250
Ensembl chrNW_004936629:3,455,887...3,568,566
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624185|PMID:16571627) MGI
TreeGrafter
Ensembl
PMID:16571627 GO_REF:0000107 GO_REF:0000118 MGI:3624185 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624185|PMID:16571627) MGI
TreeGrafter
Ensembl
PMID:16571627 GO_REF:0000107 GO_REF:0000118 MGI:3624185 NCBI chrNW_004936595:520,299...528,361
Ensembl chrNW_004936595:520,548...528,371
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821448|PMID:19008950) MGI
TreeGrafter
PMID:19008950 GO_REF:0000118 MGI:3821448 NCBI chrNW_004936578:5,693,433...5,710,137
Ensembl chrNW_004936578:5,693,342...5,710,143
JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4837757|PMID:20940229) MGI
Ensembl
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chrNW_004936621:2,899,183...2,903,427
Ensembl chrNW_004936621:2,900,995...2,902,947
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4837757|PMID:20940229) Ensembl
MGI
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chrNW_004936541:965,135...967,018
Ensembl chrNW_004936541:965,131...966,798
JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819429|PMID:20643356) MGI
Ensembl
PMID:20643356 GO_REF:0000107 MGI:4819429 NCBI chrNW_004936474:9,321,754...9,354,486
Ensembl chrNW_004936474:9,332,444...9,353,893
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830023|PMID:20704721) MGI
Ensembl
PMID:20704721 GO_REF:0000107 MGI:4830023 NCBI chrNW_004936476:16,797,836...16,866,989
Ensembl chrNW_004936476:16,798,686...16,866,896
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793375|PMID:18257070) MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3793375|PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Sfrp5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004936636:1,968,410...1,973,885
Ensembl chrNW_004936636:1,968,330...1,973,916
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070)
(MGI:4830023|PMID:20704721)
(MGI:3821448|PMID:19008950)
(MGI:3624185|PMID:16571627)
(MGI:4837757|PMID:20940229)
(MGI:4819429|PMID:20643356)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... MGI:3624185 MGI:3793375 MGI:3821448 MGI:4819429 MGI:4830023 MGI:4837757 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830282|PMID:19056682) MGI
Ensembl
PMID:19056682 GO_REF:0000107 MGI:4830282 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
platelet formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,124,489...12,217,223
Ensembl chrNW_004936495:12,124,443...12,217,242
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,963,863...15,967,458
Ensembl chrNW_004936483:15,960,036...15,968,094
JBrowse link
G Clec1b C-type lectin domain family 1 member B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5512895|PMID:23112346) MGI
TreeGrafter
Ensembl
PMID:23112346 GO_REF:0000107 GO_REF:0000118 MGI:5512895 NCBI chrNW_004936902:504,095...510,261
Ensembl chrNW_004936902:504,095...510,261
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3812266|PMID:18684867) MGI
Ensembl
PMID:18684867 GO_REF:0000107 MGI:3812266 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:894135|PMID:9233806) MGI
Ensembl
PMID:9233806 GO_REF:0000107 MGI:894135 NCBI chrNW_004936721:742,862...750,843
Ensembl chrNW_004936721:742,862...750,768
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3844189|PMID:19211936) UniProt PMID:19211936 MGI:3844189 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
G Mfap2 microfibril associated protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3785344|PMID:18281502) MGI
Ensembl
PMID:18281502 GO_REF:0000107 MGI:3785344 NCBI chrNW_004936474:3,959,499...3,963,326
Ensembl chrNW_004936474:3,956,095...3,963,253
JBrowse link
G Mpig6b megakaryocyte and platelet inhibitory receptor G6b acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5512895|PMID:23112346)
(MGI:5494903|PMID:23509158)
MGI
TreeGrafter
Ensembl
PMID:23112346 PMID:23509158 GO_REF:0000107 GO_REF:0000118 MGI:5494903 MGI:5512895 NCBI chrNW_004936727:1,808,317...1,811,058
Ensembl chrNW_004936727:1,809,407...1,811,058
JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor acts_upstream_of_or_within ISO (MGI:3812266|PMID:18684867) MGI PMID:18684867 MGI:3812266 NCBI chrNW_004936474:24,744,673...24,757,189
Ensembl chrNW_004936474:24,744,673...24,757,085
JBrowse link
G Myh9 myosin heavy chain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G Nbeal2 neurobeachin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:758,495...789,252
Ensembl chrNW_004936596:758,495...789,168
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5494903|PMID:23509158) Ensembl
MGI
PMID:23509158 GO_REF:0000107 MGI:5494903 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5494903|PMID:23509158) Ensembl
MGI
PMID:23509158 GO_REF:0000107 MGI:5494903 NCBI chrNW_004936709:864,206...884,630
Ensembl chrNW_004936709:864,197...884,610
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4834086|PMID:20525922)
(MGI:4848276|PMID:20709909)
MGI
Ensembl
PMID:20525922 PMID:20709909 GO_REF:0000107 MGI:4834086 MGI:4848276 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3808106|PMID:16763211) Ensembl
MGI
PMID:16763211 GO_REF:0000107 MGI:3808106 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065
JBrowse link
G Tpm4 tropomyosin 4 involved_in ISO (PMID:28134622), (PMID:35170221)
(MGI:5907097|PMID:28134622)
UniProt PMID:28134622 PMID:35170221 MGI:5907097 NCBI chrNW_004936596:4,406,301...4,423,775
Ensembl chrNW_004936596:4,406,283...4,418,932
JBrowse link
G Tubb1 tubulin beta 1 class VI involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:1,500,415...1,506,187
Ensembl chrNW_004936530:1,500,437...1,506,071
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2450053|PMID:12538872) MGI
Ensembl
PMID:12538872 GO_REF:0000107 MGI:2450053 NCBI chrNW_004936558:2,227,305...2,257,725
Ensembl chrNW_004936558:2,227,253...2,257,722
JBrowse link
G Wdr1 WD repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:16,643,142...16,682,450
Ensembl chrNW_004936477:16,629,856...16,682,450
JBrowse link
G Zfpm1 zinc finger protein, FOG family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,130,073...1,162,022
Ensembl chrNW_004936641:1,130,446...1,138,473
JBrowse link
G Znf385a zinc finger protein 385A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3505817|PMID:11927637) MGI
Ensembl
PMID:11927637 GO_REF:0000107 MGI:3505817 NCBI chrNW_004936512:11,562,635...11,585,026
Ensembl chrNW_004936512:11,561,435...11,585,402
JBrowse link
positive regulation of angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543310|PMID:23868260) MGI
Ensembl
PMID:23868260 GO_REF:0000107 MGI:5543310 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Adam12 ADAM metallopeptidase domain 12 involved_in ISO (PMID:28637396) BHF-UCL PMID:28637396 NCBI chrNW_004936486:13,963,000...14,189,948
Ensembl chrNW_004936486:13,963,091...14,279,796
JBrowse link
G Add1 adducin 1 ISO RGD PMID:17512505 RGD:5148005 NCBI chrNW_004936477:20,695,109...20,766,053
Ensembl chrNW_004936477:20,691,951...20,766,152
JBrowse link
G Adm adrenomedullin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643
JBrowse link
G Adm2 adrenomedullin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19592612) MGI
Ensembl
PMID:19592612 GO_REF:0000107 NCBI chrNW_004936629:360,845...362,499
Ensembl chrNW_004936629:360,305...362,846
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Aggf1 angiogenic factor with G-patch and FHA domains 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:5,069,164...5,109,299
Ensembl chrNW_004936549:5,068,656...5,111,406
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:10,641,109...10,690,587
Ensembl chrNW_004936470:10,628,128...10,680,106
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:32324784 RGD:127345089 NCBI chrNW_004936519:6,831,096...6,873,977
Ensembl chrNW_004936519:6,831,096...6,873,985
JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583
JBrowse link
G Angpt2 angiopoietin 2 ISO RGD PMID:15542434 RGD:2314235 NCBI chrNW_004936615:4,472,261...4,524,537
Ensembl chrNW_004936615:4,472,247...4,524,556
JBrowse link
G Angpt4 angiopoietin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,675,948...17,710,512
Ensembl chrNW_004936485:17,675,948...17,710,272
JBrowse link
G Angptl3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:286,432...295,021
Ensembl chrNW_004936692:286,717...294,822
JBrowse link
G Anxa3 annexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:2,153,752...2,216,498
Ensembl chrNW_004936676:2,153,689...2,216,627
JBrowse link
G Apela apelin receptor early endogenous ligand involved_in ISO (PMID:25639753) UniProt PMID:25639753 NCBI chrNW_004936555:969,902...978,736 JBrowse link
G Aplnr apelin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:5,230,836...5,234,562
Ensembl chrNW_004936581:5,231,242...5,232,384
JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:23415688) BHF-UCL PMID:23415688 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Btg1 BTG anti-proliferation factor 1 involved_in ISO (PMID:15033446) UniProt PMID:15033446 NCBI chrNW_004936507:8,789,952...8,797,247 JBrowse link
G C3 complement C3 involved_in ISO (MGI:3617287|PMID:16452172), (MGI:4430818|PMID:15611275) BHF-UCL PMID:15611275 PMID:16452172 MGI:3617287 MGI:4430818 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G C3ar1 complement C3a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936892:347,547...355,143
Ensembl chrNW_004936892:347,842...349,296
JBrowse link
G C5 complement C5 involved_in ISO (MGI:3617287|PMID:16452172) BHF-UCL PMID:16452172 MGI:3617287 NCBI chrNW_004936487:9,391,774...9,474,168
Ensembl chrNW_004936487:9,391,804...9,474,159
JBrowse link
G C5ar1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374
JBrowse link
G C6 complement C6 involved_in ISO (MGI:4430818|PMID:15611275) BHF-UCL PMID:15611275 MGI:4430818 NCBI chrNW_004936518:1,471,116...1,532,733
Ensembl chrNW_004936518:1,471,355...1,532,439
JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:5,290,068...5,321,656
Ensembl chrNW_004936497:5,290,077...5,321,876
JBrowse link
G Ccl24 C-C motif chemokine ligand 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,400,743...2,403,558
Ensembl chrNW_004936543:2,400,768...2,403,217
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:18392345 RGD:4890029 NCBI chrNW_004936490:253,279...259,947
Ensembl chrNW_004936490:253,034...259,965
JBrowse link
G Ccr3 C-C motif chemokine receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:223,660...224,739
Ensembl chrNW_004936596:223,660...224,739
JBrowse link
G Cd34 CD34 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,030,788...5,051,864
Ensembl chrNW_004936557:5,030,441...5,051,868
JBrowse link
G Cd40 CD40 molecule involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
JBrowse link
G Cdh5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:16,738,772...16,775,000
Ensembl chrNW_004936475:16,738,748...16,775,123
JBrowse link
G Cela1 chymotrypsin like elastase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5641427|PMID:24793170) MGI
Ensembl
PMID:24793170 GO_REF:0000107 MGI:5641427 NCBI chrNW_004936512:8,901,674...8,919,819
Ensembl chrNW_004936512:8,905,339...8,919,819
JBrowse link
G Chi3l1 chitinase 3 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,411,080...1,418,332
Ensembl chrNW_004936567:1,411,037...1,418,801
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in ISO (PMID:12189247), (PMID:16280133) UniProt PMID:12189247 PMID:16280133 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246
JBrowse link
G Ctsh cathepsin H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:37,135,200...37,156,081
Ensembl chrNW_004936471:37,131,817...37,156,476
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 acts_upstream_of_or_within ISO (MGI:3767138|PMID:17971299) MGI PMID:17971299 MGI:3767138 NCBI chrNW_004936475:9,443,851...9,454,715
Ensembl chrNW_004936475:9,443,733...9,455,062
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:18006432 PMID:22659346 RGD:4892022 RGD:9491778 NCBI chrNW_004936473:28,508,726...28,535,640
Ensembl chrNW_004936473:28,510,523...28,535,627
JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 involved_in ISO (PMID:12782716) UniProt PMID:12782716 NCBI chrNW_004936762:66,636...69,694
Ensembl chrNW_004936762:66,636...69,373
JBrowse link
G Cysltr1 cysteinyl leukotriene receptor 1 ISO RGD PMID:21105577 RGD:5144005 NCBI chrNW_004936547:479,261...504,757 JBrowse link
G Cysltr2 cysteinyl leukotriene receptor 2 ISO RGD PMID:21105577 RGD:5144005 NCBI chrNW_004936565:1,917,970...1,919,027 JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 ISO RGD PMID:12237779 RGD:727432 NCBI chrNW_004936608:262,653...397,753
Ensembl chrNW_004936608:262,445...397,762
JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:750,423...756,765
Ensembl chrNW_004936580:750,736...756,771
JBrowse link
G Emc10 ER membrane protein complex subunit 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936889:288,704...296,144
Ensembl chrNW_004936889:290,605...293,718
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223
JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936672:1,607,914...1,661,531
Ensembl chrNW_004936672:1,609,193...1,661,528
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:8,854,266...8,862,127
Ensembl chrNW_004936530:8,854,203...8,862,126
JBrowse link
G Eng endoglin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543310|PMID:23868260) MGI
Ensembl
PMID:23868260 GO_REF:0000107 MGI:5543310 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Epha1 EPH receptor A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:833,578...847,824
Ensembl chrNW_004936527:830,112...848,512
JBrowse link
G Erap1 endoplasmic reticulum aminopeptidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1933295|PMID:11964289) MGI
Ensembl
PMID:11964289 GO_REF:0000107 MGI:1933295 NCBI chrNW_004936523:6,661,119...6,686,988
Ensembl chrNW_004936523:6,661,315...6,690,425
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor involved_in ISO
IEA
RGD
Ensembl
PMID:12725417 GO_REF:0000107 RGD:2313689 NCBI chrNW_004936572:3,728,971...3,795,612
Ensembl chrNW_004936572:3,730,327...3,795,625
JBrowse link
G F3 coagulation factor III, tissue factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:4,637,028...4,647,915
Ensembl chrNW_004936537:4,636,667...4,647,916
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194
JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:3,677,661...3,706,511
Ensembl chrNW_004936609:3,677,237...3,706,517
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Gab1 GRB2 associated binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:4,934,743...5,048,698
Ensembl chrNW_004936535:4,932,261...5,048,693
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:86206|PMID:9043071)
(PMID:19242469)
MGI
TreeGrafter
Ensembl
PMID:9043071 PMID:19242469 GO_REF:0000107 GO_REF:0000118 MGI:86206 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (MGI:3763665|PMID:17975667) BHF-UCL PMID:17975667 MGI:3763665 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Gata6 GATA binding protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Grn granulin precursor involved_in ISO (MGI:6274947|PMID:12524533) UniProt PMID:12524533 MGI:6274947 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217
JBrowse link
G Hgf hepatocyte growth factor ISO RGD PMID:17549731 RGD:2317487 NCBI chrNW_004936734:354,798...428,356
Ensembl chrNW_004936734:356,115...428,779
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Hk2 hexokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:1,054,143...1,113,425
Ensembl chrNW_004936556:1,054,021...1,113,450
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO (MGI:5582375|PMID:23072816) BHF-UCL PMID:23072816 MGI:5582375 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:20925964 GO_REF:0000107 RGD:4145134 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 ISO RGD PMID:22098710 RGD:5686892 NCBI chrNW_004936647:2,087,650...2,133,343
Ensembl chrNW_004936647:2,087,604...2,133,355
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,110,351...2,111,896
Ensembl chrNW_004936543:2,110,304...2,112,186
JBrowse link
G Hspb6 heat shock protein family B (small) member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:568,708...571,099
Ensembl chrNW_004936570:567,860...571,402
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188
JBrowse link
G Igf2 insulin like growth factor 2 involved_in ISO PMID:28735866 BHF-UCL PMID:28735866 RGD:13506264 NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167
JBrowse link
G Il1a interleukin 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315
JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854
JBrowse link
G Itgax integrin subunit alpha X involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:8,424,095...8,442,850
Ensembl chrNW_004936543:8,424,672...8,442,850
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Itgb2 integrin subunit beta 2 ISO RGD PMID:16825578 RGD:1582375 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194
JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:19331142 RGD:6907423 NCBI chrNW_004936541:2,822,789...2,871,069
Ensembl chrNW_004936541:2,815,738...2,871,035
JBrowse link
G Itgb8 integrin subunit beta 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:6,352,186...6,447,458
Ensembl chrNW_004936546:6,353,986...6,442,756
JBrowse link
G Jup junction plakoglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,671,176...16,694,552
Ensembl chrNW_004936490:16,668,575...16,694,615
JBrowse link
G Kdr kinase insert domain receptor involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:15951738 GO_REF:0000107 GO_REF:0000118 RGD:1581593 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Lgals3 galectin 3 ISO RGD PMID:19573520 RGD:9685216 NCBI chrNW_004936697:20,861...38,568
Ensembl chrNW_004936697:27,145...38,586
JBrowse link
G LOC101964975 interleukin-8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353
JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:24633549 RGD:11040763 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904
JBrowse link
G LOC101968920 eotaxin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:835,436...848,907
Ensembl chrNW_004936538:835,859...837,710
Ensembl chrNW_004936538:835,859...837,710
JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191
JBrowse link
G LOC101973720 rap guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,636,197...5,659,606
Ensembl chrNW_004936512:5,636,758...5,659,300
Ensembl chrNW_004936512:5,636,758...5,659,300
JBrowse link
G Lrg1 leucine rich alpha-2-glycoprotein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543310|PMID:23868260)
(PMID:32887674)
MGI
Ensembl
BHF-UCL
PMID:23868260 PMID:32887674 GO_REF:0000107 MGI:5543310 NCBI chrNW_004936588:2,638,597...2,640,856
Ensembl chrNW_004936588:2,638,601...2,640,868
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:19948826 RGD:2325814 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
JBrowse link
G Mtdh metadherin involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936470:45,016,099...45,079,709
Ensembl chrNW_004936470:45,016,099...45,079,710
JBrowse link
G Mydgf myeloid derived growth factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:2,706,329...2,716,545
Ensembl chrNW_004936588:2,706,667...2,716,503
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO RGD PMID:23904790 RGD:10412703 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262
JBrowse link
G Ninj1 ninjurin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:2,486,831...2,531,943
Ensembl chrNW_004936487:2,487,904...2,491,827
JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534
JBrowse link
G Notch4 notch receptor 4 acts_upstream_of_or_within ISO (MGI:5581550|PMID:24667410) MGI PMID:24667410 MGI:5581550 NCBI chrNW_004936727:1,386,842...1,409,823 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3615102|PMID:16424942) MGI
Ensembl
PMID:16424942 GO_REF:0000107 MGI:3615102 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Nras NRAS proto-oncogene, GTPase involved_in ISO (MGI:5514117|PMID:23619365) BHF-UCL PMID:23619365 MGI:5514117 NCBI chrNW_004936627:73,413...82,590
Ensembl chrNW_004936627:73,413...82,590
JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISO (PMID:15488758) UniProt PMID:15488758 NCBI chrNW_004936580:6,002,168...6,021,690
Ensembl chrNW_004936580:6,002,120...6,021,709
JBrowse link
G Pak4 p21 (RAC1) activated kinase 4 involved_in ISO (PMID:21788589) BHF-UCL PMID:21788589 NCBI chrNW_004936661:2,012,439...2,048,523 JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:1,129,367...1,144,020
Ensembl chrNW_004936815:1,129,352...1,143,992
JBrowse link
G Pdcl3 phosducin like 3 acts_upstream_of_or_within ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004936661:419,113...428,032 JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265
JBrowse link
G Pgf placental growth factor involved_in ISO
IEA
RGD
TreeGrafter
PMID:21329947 GO_REF:0000118 RGD:6483777 NCBI chrNW_004936488:4,098,187...4,111,108
Ensembl chrNW_004936488:4,098,225...4,111,142
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in ISO (MGI:6405586|PMID:31915155) BHF-UCL PMID:31915155 MGI:6405586 NCBI chrNW_004936623:3,672,201...3,696,959 JBrowse link
G Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,953,372...1,983,765
Ensembl chrNW_004936595:1,953,375...1,986,150
JBrowse link
G Plcg1 phospholipase C gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581
JBrowse link
G Prkca protein kinase C alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052
JBrowse link
G Prkcb protein kinase C beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,410,273...8,729,238
Ensembl chrNW_004936501:8,437,715...8,728,716
JBrowse link
G Prkd1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:4,469,092...4,601,183
Ensembl chrNW_004936494:4,469,089...4,601,214
JBrowse link
G Prkd2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:524,532...551,451
Ensembl chrNW_004936664:522,910...551,469
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,775,884...4,814,574
Ensembl chrNW_004936514:4,791,031...4,812,027
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810
JBrowse link
G Pxn paxillin involved_in ISO (MGI:5588737|PMID:24863063) BHF-UCL PMID:24863063 MGI:5588737 NCBI chrNW_004936668:660,415...709,282 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,479,899...17,481,788
Ensembl chrNW_004936490:17,479,650...17,482,716
JBrowse link
G Rhob ras homolog family member B involved_in ISO (MGI:2679407|PMID:14597666) UniProt PMID:14597666 MGI:2679407 NCBI chrNW_004936493:10,987,801...10,990,207 JBrowse link
G Rras RAS related involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,456,681...3,460,537
Ensembl chrNW_004936664:3,456,290...3,460,788
JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:4366092|PMID:19805174) UniProt PMID:19805174 MGI:4366092 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
G Sash1 SAM and SH3 domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chrNW_004936489:1,569,143...1,740,398
Ensembl chrNW_004936489:1,447,885...1,740,400
JBrowse link
G Sema5a semaphorin 5A involved_in ISO (MGI:5526935|PMID:19850054) UniProt PMID:19850054 MGI:5526935 NCBI chrNW_004936643:1,352,401...1,803,553
Ensembl chrNW_004936643:1,355,070...1,637,151
JBrowse link
G Serpine1 serpin family E member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5634654|PMID:21119013) MGI
Ensembl
PMID:21119013 GO_REF:0000107 MGI:5634654 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:17,454,274...17,594,894
Ensembl chrNW_004936489:17,454,270...17,594,901
JBrowse link
G Sp1 Sp1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISO (PMID:26694763) BHF-UCL PMID:26694763 NCBI chrNW_004936498:849,775...1,063,552
Ensembl chrNW_004936498:849,739...1,063,552
JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:16720756 RGD:1601448 NCBI chrNW_004936588:2,040,712...2,044,635
Ensembl chrNW_004936588:2,040,630...2,045,110
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:9329972 GO_REF:0000107 GO_REF:0000118 RGD:1601511 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tert telomerase reverse transcriptase ISO RGD PMID:23013219 RGD:11038770 NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543310|PMID:23868260) MGI
Ensembl
PMID:23868260 GO_REF:0000107 MGI:5543310 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:24,709,424...24,729,246
Ensembl chrNW_004936474:24,709,424...24,729,245
JBrowse link
G Tlr3 toll like receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO RGD PMID:14970118 RGD:1624195 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:17089015 RGD:2306830 NCBI chrNW_004936623:2,339,259...2,345,717
Ensembl chrNW_004936623:2,340,778...2,345,700
JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:17089015 RGD:2306830 NCBI chrNW_004936923:24,952...31,083 JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3846280|PMID:19204325)
(PMID:19204325)
MGI
Ensembl
PMID:19204325 GO_REF:0000107 MGI:3846280 NCBI chrNW_004936557:622,947...661,495
Ensembl chrNW_004936557:623,934...661,857
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:4439256|PMID:20133819) RGD
Ensembl
TreeGrafter
MGI
PMID:20133819 PMID:23562340 GO_REF:0000107 GO_REF:0000118 MGI:4439256 RGD:7421600 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:4,963,161...4,966,258
Ensembl chrNW_004936599:4,962,222...4,966,264
JBrowse link
G Vegfc vascular endothelial growth factor C involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936516:7,217,543...7,332,531
Ensembl chrNW_004936516:7,217,543...7,332,559
JBrowse link
G Vegfd vascular endothelial growth factor D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:4,761,827...4,794,751
Ensembl chrNW_004936470:4,762,332...4,793,938
JBrowse link
G Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ISO RGD PMID:27389904 RGD:127338472 NCBI chrNW_004936627:3,890,629...3,963,169
Ensembl chrNW_004936627:3,890,629...3,962,899
JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:933,637...1,069,885
Ensembl chrNW_004936606:934,337...1,067,275
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528
JBrowse link
G Znf304 zinc finger protein 304 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936897:244,051...253,580
Ensembl chrNW_004936897:243,884...254,033
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004936469:49,067,357...49,335,212
Ensembl chrNW_004936469:49,067,012...49,335,219
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004936473:23,756,291...23,940,966
Ensembl chrNW_004936473:23,755,627...23,900,014
JBrowse link
G Dag1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,099,510...1,171,587
Ensembl chrNW_004936529:1,099,647...1,173,124
JBrowse link
G Phldb1 pleckstrin homology like domain family B member 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004936542:3,639,992...3,688,000
Ensembl chrNW_004936542:3,639,982...3,688,450
JBrowse link
G Phldb2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936834:592,688...791,533
Ensembl chrNW_004936834:592,584...793,386
JBrowse link
positive regulation of blood microparticle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365
JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
positive regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Mdk midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,687,825...2,690,292
Ensembl chrNW_004936562:2,687,825...2,689,484
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1 angiotensin II receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:6,831,096...6,873,977
Ensembl chrNW_004936519:6,831,096...6,873,985
JBrowse link
G Apela apelin receptor early endogenous ligand involved_in ISO (MGI:5914956|PMID:28890073) UniProt PMID:28890073 MGI:5914956 NCBI chrNW_004936555:969,902...978,736 JBrowse link
G Aplnr apelin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:5,230,836...5,234,562
Ensembl chrNW_004936581:5,231,242...5,232,384
JBrowse link
G Gata2 GATA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Hmox1 heme oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Jcad junctional cadherin 5 associated involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936613:4,047,310...4,083,235
Ensembl chrNW_004936613:4,047,265...4,083,272
JBrowse link
G LOC101976958 fibroblast growth factor-binding protein 1 involved_in ISO (PMID:27121396) BHF-UCL PMID:27121396 NCBI chrNW_004936477:12,030,140...12,032,626 JBrowse link
G Ppp1r16b protein phosphatase 1 regulatory subunit 16B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:2,552,168...2,654,085
Ensembl chrNW_004936561:2,552,166...2,654,589
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of
involved_in
ISO
IEA
(PMID:30106099) ARUK-UCL
Ensembl
PMID:30106099 GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
positive regulation of cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,295,023...22,300,155
Ensembl chrNW_004936476:22,295,021...22,300,161
JBrowse link
positive regulation of cell migration involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583
JBrowse link
G Anxa1 annexin A1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,963,863...15,967,458
Ensembl chrNW_004936483:15,960,036...15,968,094
JBrowse link
G Foxc2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Gata2 GATA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Hdac7 histone deacetylase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,680,564...5,701,182
Ensembl chrNW_004936512:5,682,490...5,697,869
JBrowse link
G Hdac9 histone deacetylase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:4,398,003...5,247,649
Ensembl chrNW_004936546:4,781,304...5,246,939
JBrowse link
G Hmox1 heme oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Jcad junctional cadherin 5 associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936613:4,047,310...4,083,235
Ensembl chrNW_004936613:4,047,265...4,083,272
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G LOC101976958 fibroblast growth factor-binding protein 1 involved_in ISO (PMID:27121396) BHF-UCL PMID:27121396 NCBI chrNW_004936477:12,030,140...12,032,626 JBrowse link
G Map3k3 mitogen-activated protein kinase kinase kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:4,276,371...4,345,239
Ensembl chrNW_004936541:4,276,371...4,344,008
JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,845,372...1,964,908
Ensembl chrNW_004936528:1,869,527...1,964,183
JBrowse link
G Plk2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:9,680,461...9,686,593
Ensembl chrNW_004936480:9,680,449...9,686,595
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO PMID:9630216 RGD
BHF-UCL
PMID:9630216 RGD:5135054 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Rhoj ras homolog family member J involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:7,094,522...7,174,371
Ensembl chrNW_004936495:7,094,513...7,174,371
JBrowse link
G Srpx2 sushi repeat containing protein X-linked 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936584:5,855,818...5,879,478
Ensembl chrNW_004936584:5,855,818...5,880,259
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amtn amelotin involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936598:4,204,094...4,210,492
Ensembl chrNW_004936598:4,203,255...4,215,567
JBrowse link
G Cftr CF transmembrane conductance regulator involved_in ISO (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3603472|PMID:16014627) MGI PMID:16014627 MGI:3603472 NCBI chrNW_004936905:458,062...463,359
Ensembl chrNW_004936905:458,298...463,346
JBrowse link
G Enam enamelin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5647983|PMID:24603688) MGI
TreeGrafter
PMID:24603688 GO_REF:0000118 MGI:5647983 NCBI chrNW_004936598:4,118,031...4,132,342
Ensembl chrNW_004936598:4,118,579...4,132,692
JBrowse link
G Odaph odontogenesis associated phosphoprotein involved_in ISO (PMID:22901946) UniProt PMID:22901946 NCBI chrNW_004936598:400,214...407,597 JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chrNW_004936527:6,485,566...6,499,901
Ensembl chrNW_004936527:6,485,511...6,499,924
JBrowse link
positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Twist1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
positive regulation of endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101971629 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3689690|PMID:16908534) MGI
Ensembl
PMID:16908534 GO_REF:0000107 MGI:3689690 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3764939|PMID:17940068) MGI
Ensembl
PMID:17940068 GO_REF:0000107 MGI:3764939 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430
JBrowse link
positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
positive regulation of epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Egf epidermal growth factor involved_in ISO (PMID:31915155) BHF-UCL PMID:31915155 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Mmrn2 multimerin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:22,609...39,974
Ensembl chrNW_004936804:22,533...39,540
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in ISO (PMID:31915155) BHF-UCL PMID:31915155 NCBI chrNW_004936623:3,672,201...3,696,959 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:31915155) BHF-UCL PMID:31915155 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
positive regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:3619310|PMID:14607964) MGI PMID:14607964 MGI:3619310 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain involved_in ISO (MGI:2153656|PMID:11714799) BHF-UCL PMID:11714799 MGI:2153656 NCBI chrNW_004936476:25,836,163...25,840,191
Ensembl chrNW_004936476:25,836,142...25,840,197
JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO (MGI:3036943|PMID:14557413) MGI PMID:14557413 MGI:3036943 NCBI chrNW_004936492:98,878...101,920 JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within ISO (MGI:3037416|PMID:14988498) MGI PMID:14988498 MGI:3037416 NCBI chrNW_004936595:839,877...842,962
Ensembl chrNW_004936595:839,877...842,962
JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3036943|PMID:14557413) MGI
Ensembl
PMID:14557413 GO_REF:0000107 MGI:3036943 NCBI chrNW_004936472:3,789,111...3,834,163
Ensembl chrNW_004936472:3,788,095...3,822,148
JBrowse link
positive regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:5,290,068...5,321,656
Ensembl chrNW_004936497:5,290,077...5,321,876
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439256|PMID:20133819) MGI
Ensembl
PMID:20133819 GO_REF:0000107 MGI:4439256 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439256|PMID:20133819) MGI
Ensembl
PMID:20133819 GO_REF:0000107 MGI:4439256 NCBI chrNW_004936516:7,217,543...7,332,531
Ensembl chrNW_004936516:7,217,543...7,332,559
JBrowse link
positive regulation of macrophage fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam9 ADAM metallopeptidase domain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:2,301,470...2,388,533
Ensembl chrNW_004936710:2,301,730...2,387,695
JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462143|PMID:22865856) MGI
Ensembl
PMID:22865856 GO_REF:0000107 MGI:5462143 NCBI chrNW_004936470:39,664,573...39,671,532
Ensembl chrNW_004936470:39,664,511...39,671,532
JBrowse link
G Ocstamp osteoclast stimulatory transmembrane protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462143|PMID:22865856) MGI
Ensembl
PMID:22865856 GO_REF:0000107 MGI:5462143 NCBI chrNW_004936514:6,601,580...6,608,785
Ensembl chrNW_004936514:6,601,637...6,608,785
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940
JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936570:457,993...460,735
Ensembl chrNW_004936570:458,054...460,579
JBrowse link
positive regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987
JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423
JBrowse link
positive regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn2 calpain 2 ISO RGD PMID:7657725 RGD:13792659 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682
JBrowse link
G Ccl8 C-C motif chemokine ligand 8 acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) MGI PMID:23844157 MGI:5532227 NCBI chrNW_004936538:805,273...806,715
Ensembl chrNW_004936538:805,259...806,695
JBrowse link
G Cd53 CD53 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:2,263,248...2,285,625
Ensembl chrNW_004936704:2,262,945...2,285,631
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) MGI PMID:23844157 MGI:5532227 NCBI chrNW_004936617:4,224,131...4,239,080
Ensembl chrNW_004936617:4,224,131...4,238,796
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532227|PMID:23844157) MGI
Ensembl
PMID:23844157 GO_REF:0000107 MGI:5532227 NCBI chrNW_004936676:33,580...40,323
Ensembl chrNW_004936676:32,128...40,329
JBrowse link
G Ehd1 EH domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,451,207...4,473,078
Ensembl chrNW_004936599:4,450,188...4,473,738
JBrowse link
G Ehd2 EH domain containing 2 involved_in ISO (MGI:5487527|PMID:21177873) UniProt PMID:21177873 MGI:5487527 NCBI chrNW_004936664:1,316,621...1,331,678 JBrowse link
G Flot1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071
JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) MGI PMID:23844157 MGI:5532227 NCBI chrNW_004936664:3,343,541...3,351,590
Ensembl chrNW_004936664:3,343,491...3,350,176
JBrowse link
G Gdf15 growth differentiation factor 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532227|PMID:23844157) MGI
Ensembl
PMID:23844157 GO_REF:0000107 MGI:5532227 NCBI chrNW_004936596:2,854,620...2,857,018
Ensembl chrNW_004936596:2,854,841...2,857,111
JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3621675|PMID:12757709) MGI
Ensembl
PMID:12757709 GO_REF:0000107 MGI:3621675 NCBI chrNW_004936501:11,025,590...11,058,807
Ensembl chrNW_004936501:11,025,567...11,058,818
JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230
JBrowse link
G LOC101976824 nuclear factor of activated T cells 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3621675|PMID:12757709) MGI
Ensembl
PMID:12757709 GO_REF:0000107 MGI:3621675 NCBI chrNW_004936514:3,453,475...3,579,292
Ensembl chrNW_004936514:3,467,178...3,578,882
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,407,187...1,409,683
Ensembl chrNW_004936528:1,407,661...1,409,573
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (PMID:17150207) UniProt PMID:17150207 NCBI chrNW_004936671:1,064,937...1,232,985
Ensembl chrNW_004936671:1,051,742...1,093,021
JBrowse link
G Scgb3a1 secretoglobin family 3A member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532227|PMID:23844157) MGI
TreeGrafter
Ensembl
PMID:23844157 GO_REF:0000107 GO_REF:0000118 MGI:5532227 NCBI chrNW_004936739:300,579...303,414
Ensembl chrNW_004936739:301,760...303,416
JBrowse link
G Tnfsf14 TNF superfamily member 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532227|PMID:23844157) MGI
Ensembl
PMID:23844157 GO_REF:0000107 MGI:5532227 NCBI chrNW_004936588:3,976,492...3,979,825
Ensembl chrNW_004936588:3,976,492...3,979,825
JBrowse link
positive regulation of optic nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (MGI:5009386|PMID:18083586) UniProt PMID:18083586 MGI:5009386 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
positive regulation of platelet formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpl MPL proto-oncogene, thrombopoietin receptor ISO RGD PMID:10606160 RGD:10449003 NCBI chrNW_004936474:24,744,673...24,757,189
Ensembl chrNW_004936474:24,744,673...24,757,085
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Edn1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:12724418 RGD:2312280 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chrNW_004936475:89,717...137,866
Ensembl chrNW_004936475:89,570...126,025
JBrowse link
G Prkd1 protein kinase D1 ISO RGD PMID:16648482 RGD:243065275 NCBI chrNW_004936494:4,469,092...4,601,183
Ensembl chrNW_004936494:4,469,089...4,601,214
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
positive regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5002778|PMID:21364285) MGI
Ensembl
PMID:21364285 GO_REF:0000107 MGI:5002778 NCBI chrNW_004936648:395,526...546,705
Ensembl chrNW_004936648:395,524...546,729
JBrowse link
G Gng5 G protein subunit gamma 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5604689|PMID:24599258) MGI
Ensembl
PMID:24599258 GO_REF:0000107 MGI:5604689 NCBI chrNW_004936608:1,102,140...1,110,116
Ensembl chrNW_004936608:1,102,140...1,110,116
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5002778|PMID:21364285) MGI
Ensembl
PMID:21364285 GO_REF:0000107 MGI:5002778 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:4943633|PMID:19745164) MGI PMID:19745164 MGI:4943633 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525
JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5437816|PMID:22898775) MGI
Ensembl
PMID:22898775 GO_REF:0000107 MGI:5437816 NCBI chrNW_004936558:7,408,229...7,454,897
Ensembl chrNW_004936558:7,408,222...7,454,901
JBrowse link
positive regulation of sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Bmper BMP binding endothelial regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:9,705,634...9,941,382
Ensembl chrNW_004936478:9,705,604...9,941,340
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194
JBrowse link
G Fut1 fucosyltransferase 1 (H blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,822,972...2,824,331
Ensembl chrNW_004936664:2,822,972...2,824,108
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide ISO RGD PMID:21642627 RGD:12904963 NCBI chrNW_004936602:3,037,862...3,044,863
Ensembl chrNW_004936602:3,038,549...3,042,506
JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:21642627 RGD:12904963 NCBI chrNW_004936593:268,736...273,623
Ensembl chrNW_004936593:268,350...277,229
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:30052311 RGD:155663378 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3760906|PMID:16365390) UniProt PMID:16365390 MGI:3760906 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
JBrowse link
G Il10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,588,818...11,612,580
Ensembl chrNW_004936512:11,588,645...11,612,669
JBrowse link
G Jak1 Janus kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:2,298,149...2,354,084
Ensembl chrNW_004936692:2,299,504...2,354,132
JBrowse link
G Jcad junctional cadherin 5 associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936613:4,047,310...4,083,235
Ensembl chrNW_004936613:4,047,265...4,083,272
JBrowse link
G Jmjd8 jumonji domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:327,053...328,789
Ensembl chrNW_004936501:327,150...328,720
JBrowse link
G Klf4 KLF transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265
JBrowse link
G Pkm pyruvate kinase M1/2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,589,322...31,617,891
Ensembl chrNW_004936471:31,589,324...31,617,873
JBrowse link
G S100a1 S100 calcium binding protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,429,697...3,433,567
Ensembl chrNW_004936580:3,427,212...3,434,577
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:20052412 RGD:12879408 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Slc39a12 solute carrier family 39 member 12 ISO RGD PMID:26258299 RGD:10401832 NCBI chrNW_004936520:9,380,723...9,444,146
Ensembl chrNW_004936520:9,380,650...9,444,152
JBrowse link
G Smad1 SMAD family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:3,582,512...3,626,312
Ensembl chrNW_004936535:3,582,489...3,657,063
JBrowse link
G Tjp1 tight junction protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:1,814,870...2,045,802
Ensembl chrNW_004936483:1,814,894...2,030,946
JBrowse link
G Tnn tenascin N involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:13,085,325...13,149,840
Ensembl chrNW_004936481:13,086,297...13,158,490
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
positive regulation of syncytium formation by plasma membrane fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk1 calcium/calmodulin dependent protein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,402,559...3,413,323
Ensembl chrNW_004936602:3,401,005...3,414,935
JBrowse link
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO (MGI:5049808|PMID:21558372) MGI PMID:21558372 MGI:5049808 NCBI chrNW_004936476:7,724,666...7,738,401 JBrowse link
G LOC101973720 rap guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,636,197...5,659,606
Ensembl chrNW_004936512:5,636,758...5,659,300
Ensembl chrNW_004936512:5,636,758...5,659,300
JBrowse link
positive regulation of tendon cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf7 growth differentiation factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
JBrowse link
G Six4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198
JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:24955809 RGD:11352686 NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459
JBrowse link
G Foxc2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:30052311 RGD:155663378 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:17,454,274...17,594,894
Ensembl chrNW_004936489:17,454,270...17,594,901
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:16109918) UniProt PMID:16109918 NCBI chrNW_004936599:4,963,161...4,966,258
Ensembl chrNW_004936599:4,962,222...4,966,264
JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
prechordal plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,802,057...6,957,640
Ensembl chrNW_004936522:6,802,052...6,956,129
JBrowse link
primary heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
G Wnt11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,909,041...4,927,482
Ensembl chrNW_004936498:4,908,978...4,927,165
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3703395|PMID:16364283) MGI PMID:16364283 MGI:3703395 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709664|PMID:17473173) MGI
Ensembl
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833
JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5546318|PMID:23552073) MGI
Ensembl
PMID:23552073 GO_REF:0000107 MGI:5546318 NCBI chrNW_004936500:4,244,706...4,257,223
Ensembl chrNW_004936500:4,244,604...4,257,265
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611720|PMID:16368929) MGI
Ensembl
PMID:16368929 GO_REF:0000107 MGI:3611720 NCBI chrNW_004937847:8,179...16,783
Ensembl chrNW_004937847:7,456...16,783
JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:4950786|PMID:21445260) MGI PMID:21445260 MGI:4950786 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2157654|PMID:11291865) Ensembl
MGI
PMID:11291865 GO_REF:0000107 MGI:2157654 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4950786|PMID:21445260) MGI
Ensembl
PMID:21445260 GO_REF:0000107 MGI:4950786 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004936495:1,433,124...1,449,409
Ensembl chrNW_004936495:1,432,598...1,442,918
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1312998|PMID:9799237) MGI
Ensembl
PMID:9799237 GO_REF:0000107 MGI:1312998 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512) MGI
Ensembl
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077
JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kiaa0319l KIAA0319 like acts_upstream_of_or_within ISO (MGI:6198830|PMID:29991750) MGI PMID:29991750 MGI:6198830 NCBI chrNW_004936474:18,002,864...18,110,000
Ensembl chrNW_004936474:18,003,930...18,106,273
JBrowse link
G Sox30 SRY-box transcription factor 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:5,501,315...5,537,946
Ensembl chrNW_004936515:5,458,393...5,537,946
JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,523,658...1,553,464
Ensembl chrNW_004936783:1,523,661...1,576,568
JBrowse link
prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of
involved_in
ISO
IEA
(MGI:1934513|PMID:11401393) MGI
Ensembl
PMID:11401393 GO_REF:0000107 MGI:1934513 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2673763|PMID:12941620) MGI
Ensembl
PMID:12941620 GO_REF:0000107 MGI:2673763 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3832153|PMID:16707121) MGI
Ensembl
PMID:16707121 GO_REF:0000107 MGI:3832153 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3771245|PMID:18028901) MGI
Ensembl
PMID:18028901 GO_REF:0000107 MGI:3771245 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Shh sonic hedgehog signaling molecule NOT|acts_upstream_of_or_within ISO (MGI:3037217|PMID:15013801) MGI PMID:15013801 MGI:3037217 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928010|PMID:11106548) MGI
Ensembl
PMID:11106548 GO_REF:0000107 MGI:1928010 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
pulmonary valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein alpha 5 involved_in ISO (PMID:22199024) BHF-UCL PMID:22199024 NCBI chrNW_004936867:269,477...279,549 JBrowse link
G Tbx20 T-box transcription factor 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:10,887,900...10,939,510
Ensembl chrNW_004936478:10,888,045...10,939,564
JBrowse link
regulation of angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgra2 adhesion G protein-coupled receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,258,088...1,296,346
Ensembl chrNW_004936710:1,257,931...1,298,885
JBrowse link
G Efna1 ephrin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,654,503...4,660,950
Ensembl chrNW_004936580:4,654,503...4,660,966
JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 involved_in ISO (MGI:5306291|PMID:18500250) UniProt PMID:18500250 MGI:5306291 NCBI chrNW_004936484:19,343,770...19,386,087 JBrowse link
G Emp2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:8,854,266...8,862,127
Ensembl chrNW_004936530:8,854,203...8,862,126
JBrowse link
G Epha2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:3,728,971...3,795,612
Ensembl chrNW_004936572:3,730,327...3,795,625
JBrowse link
G Fkbpl FKBP prolyl isomerase like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699248|PMID:25767277) Ensembl
MGI
PMID:25767277 GO_REF:0000107 MGI:5699248 NCBI chrNW_004936727:1,474,052...1,475,602
Ensembl chrNW_004936727:1,474,533...1,475,582
JBrowse link
G Htatip2 HIV-1 Tat interactive protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:1,315,921...1,332,926
Ensembl chrNW_004936654:1,315,862...1,333,005
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (MGI:2449676|PMID:12498716) MGI PMID:12498716 MGI:2449676 NCBI chrNW_004936485:18,610,721...18,611,889
Ensembl chrNW_004936485:18,610,665...18,612,059
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,588,818...11,612,580
Ensembl chrNW_004936512:11,588,645...11,612,669
JBrowse link
G Lep leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G LOC101970211 olfactory receptor 10J5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:1,047,708...1,048,645
Ensembl chrNW_004936740:1,040,510...1,048,637
JBrowse link
G LOC101973720 rap guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,636,197...5,659,606
Ensembl chrNW_004936512:5,636,758...5,659,300
Ensembl chrNW_004936512:5,636,758...5,659,300
JBrowse link
G Mapk7 mitogen-activated protein kinase 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2429454|PMID:12221099) MGI
Ensembl
PMID:12221099 GO_REF:0000107 MGI:2429454 NCBI chrNW_004936881:372,713...377,655
Ensembl chrNW_004936881:372,810...377,214
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624886|PMID:16288202) MGI
Ensembl
PMID:16288202 GO_REF:0000107 MGI:3624886 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Ninj1 ninjurin 1 involved_in ISO (MGI:6695678|PMID:25766274) UniProt PMID:25766274 MGI:6695678 NCBI chrNW_004936487:2,486,831...2,531,943
Ensembl chrNW_004936487:2,487,904...2,491,827
JBrowse link
G Pde3b phosphodiesterase 3B involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chrNW_004936528:3,922,436...4,087,991
Ensembl chrNW_004936528:3,923,379...4,087,188
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:17,084,006...17,112,264
Ensembl chrNW_004936479:17,084,920...17,112,258
JBrowse link
G Plxnd1 plexin D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:848,130...882,195
Ensembl chrNW_004936602:848,140...881,873
JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:10611347 RGD:9999146 NCBI chrNW_004936664:2,910,609...2,914,205 JBrowse link
G Prok1 prokineticin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2663313|PMID:12746324) MGI
Ensembl
PMID:12746324 GO_REF:0000107 MGI:2663313 NCBI chrNW_004936704:1,876,560...1,881,439
Ensembl chrNW_004936704:1,876,560...1,881,419
JBrowse link
G Reck reversion inducing cysteine rich protein with kazal motifs involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:4,021,666...4,099,703
Ensembl chrNW_004936524:4,021,660...4,099,705
JBrowse link
G Rnh1 ribonuclease/angiogenin inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:352,493...362,501
Ensembl chrNW_004936888:350,867...362,545
JBrowse link
G Serpine1 serpin family E member 1 acts_upstream_of_or_within ISO (MGI:2158019|PMID:11818362) MGI PMID:11818362 MGI:2158019 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:15592518) UniProt PMID:15592518 NCBI chrNW_004936525:6,136,343...6,231,051 JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:2387759|PMID:9683559) MGI PMID:9683559 MGI:2387759 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tnfrsf12a TNF receptor superfamily member 12A involved_in ISO (MGI:5572898|PMID:11728344) UniProt PMID:11728344 MGI:5572898 NCBI chrNW_004936694:1,149,169...1,151,098
Ensembl chrNW_004936694:1,149,076...1,151,151
JBrowse link
G Tspan12 tetraspanin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:4,265,475...4,338,518
Ensembl chrNW_004936605:4,265,316...4,338,526
JBrowse link
G Vash1 vasohibin 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936488:5,675,788...5,696,198
Ensembl chrNW_004936488:5,675,782...5,696,222
JBrowse link
G Vash2 vasohibin 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936557:622,947...661,495
Ensembl chrNW_004936557:623,934...661,857
JBrowse link
G Wars1 tryptophanyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936604:3,985,002...4,016,870
Ensembl chrNW_004936604:3,984,872...4,016,911
JBrowse link
regulation of animal organ formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:3790398|PMID:17537799) UniProt PMID:17537799 MGI:3790398 NCBI chrNW_004936533:5,411,949...5,459,693
Ensembl chrNW_004936533:5,411,848...5,459,693
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbpl FKBP prolyl isomerase like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699248|PMID:25767277) Ensembl
MGI
PMID:25767277 GO_REF:0000107 MGI:5699248 NCBI chrNW_004936727:1,474,052...1,475,602
Ensembl chrNW_004936727:1,474,533...1,475,582
JBrowse link
regulation of cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO RGD PMID:18824567 RGD:2325311 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
regulation of cell migration involved in somitogenic axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004936529:8,885,803...9,034,217
Ensembl chrNW_004936529:8,920,243...9,033,865
JBrowse link
regulation of cell migration involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3615102|PMID:16424942) MGI
Ensembl
PMID:16424942 GO_REF:0000107 MGI:3615102 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:4453947|PMID:20102707) MGI PMID:20102707 MGI:4453947 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3603472|PMID:16014627) MGI
Ensembl
PMID:16014627 GO_REF:0000107 MGI:3603472 NCBI chrNW_004936905:419,478...427,335
Ensembl chrNW_004936905:420,354...427,324
JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:6443509|PMID:31336344), (MGI:6690584|PMID:30243146) MGI
Ensembl
PMID:30243146 PMID:31336344 GO_REF:0000107 MGI:6443509 MGI:6690584 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
regulation of epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor beta 1 NOT|involved_in ISO (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb3 transforming growth factor beta 3 NOT|involved_in ISO (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4438817|PMID:19966784) Ensembl
MGI
PMID:19966784 GO_REF:0000107 MGI:4438817 NCBI chrNW_004936563:676,564...772,877
Ensembl chrNW_004936563:712,029...772,101
JBrowse link
regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3795835|PMID:18438409) UniProt PMID:18438409 MGI:3795835 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
G Pkn1 protein kinase N1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5467878|PMID:23223530) MGI
Ensembl
PMID:23223530 GO_REF:0000107 MGI:5467878 NCBI chrNW_004936659:2,990,905...3,014,553
Ensembl chrNW_004936659:2,990,937...3,014,485
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345
JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3702797|PMID:16943278) MGI
Ensembl
PMID:16943278 GO_REF:0000107 MGI:3702797 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3702797|PMID:16943278) MGI
Ensembl
PMID:16943278 GO_REF:0000107 MGI:3702797 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3766861|PMID:17881493) MGI
Ensembl
PMID:17881493 GO_REF:0000107 MGI:3766861 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myog myogenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,507,042...1,509,814
Ensembl chrNW_004936567:1,507,042...1,509,815
JBrowse link
G Plekho1 pleckstrin homology domain containing O1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:440,111...448,651
Ensembl chrNW_004936580:440,087...447,202
JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A NOT|involved_in ISO (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2673763|PMID:12941620) MGI
Ensembl
PMID:12941620 GO_REF:0000107 MGI:2673763 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3785350|PMID:18393306)
(MGI:2386799|PMID:12221011)
MGI
Ensembl
PMID:12221011 PMID:18393306 GO_REF:0000107 MGI:2386799 MGI:3785350 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A-kinase anchoring protein 13 involved_in ISO (MGI:5308772|PMID:20139090) UniProt PMID:20139090 MGI:5308772 NCBI chrNW_004936483:11,661,862...11,977,292 JBrowse link
G Ankrd23 ankyrin repeat domain 23 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3760007|PMID:17392382) MGI
Ensembl
PMID:17392382 GO_REF:0000107 MGI:3760007 NCBI chrNW_004936744:776,030...781,710
Ensembl chrNW_004936744:776,710...781,670
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO (MGI:3711360|PMID:17322895) MGI PMID:17322895 MGI:3711360 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3768576|PMID:17875930) MGI PMID:17875930 MGI:3768576 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4438134|PMID:19620969) MGI
Ensembl
PMID:19620969 GO_REF:0000107 MGI:4438134 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4354447|PMID:19609448) MGI
Ensembl
PMID:19609448 GO_REF:0000107 MGI:4354447 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
JBrowse link
G Isl1 ISL LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4438134|PMID:19620969) MGI
Ensembl
PMID:19620969 GO_REF:0000107 MGI:4438134 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854
JBrowse link
regulation of somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdx1 caudal type homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,736,621...4,752,354
Ensembl chrNW_004936504:4,736,666...4,752,260
JBrowse link
G Cdx2 caudal type homeobox 2 involved_in ISO (MGI:5301472|PMID:22015720) UniProt PMID:22015720 MGI:5301472 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3820487|PMID:17974128) MGI
Ensembl
PMID:17974128 GO_REF:0000107 MGI:3820487 NCBI chrNW_004936503:3,857,165...3,864,130
Ensembl chrNW_004936503:3,857,165...3,864,147
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367298|PMID:19779553) MGI
Ensembl
PMID:19779553 GO_REF:0000107 MGI:4367298 NCBI chrNW_004936823:283,207...290,970
Ensembl chrNW_004936823:283,205...290,986
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:72973|PMID:7789282) MGI
Ensembl
PMID:7789282 GO_REF:0000107 MGI:72973 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (MGI:3820487|PMID:17974128) MGI PMID:17974128 MGI:3820487 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815
JBrowse link
regulation of sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf16 fibroblast growth factor 16 NOT|involved_in ISO (PMID:16756958) UniProt PMID:16756958 NCBI chrNW_004936683:2,454,067...2,463,653
Ensembl chrNW_004936683:2,454,067...2,463,635
JBrowse link
G Fgf18 fibroblast growth factor 18 NOT|involved_in ISO (PMID:16756958) UniProt PMID:16756958 NCBI chrNW_004936609:3,677,661...3,706,511
Ensembl chrNW_004936609:3,677,237...3,706,517
JBrowse link
G Glul glutamate-ammonia ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:7,293,301...7,301,416
Ensembl chrNW_004936481:7,293,091...7,306,202
JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 involved_in ISO (MGI:3640069|PMID:16680193) UniProt PMID:16680193 MGI:3640069 NCBI chrNW_004936706:37,480...53,306 JBrowse link
G Ppp1r16b protein phosphatase 1 regulatory subunit 16B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936561:2,552,168...2,654,085
Ensembl chrNW_004936561:2,552,166...2,654,589
JBrowse link
G Rhoj ras homolog family member J involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:7,094,522...7,174,371
Ensembl chrNW_004936495:7,094,513...7,174,371
JBrowse link
G Tspan18 tetraspanin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:3,842,035...3,968,555
Ensembl chrNW_004936562:3,843,780...3,857,679
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
JBrowse link
renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714576|PMID:17537789) MGI
Ensembl
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
renal vesicle induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox8 SRY-box transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:128,386...132,648
Ensembl chrNW_004936501:127,703...132,704
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2150217|PMID:11507767) MGI
Ensembl
PMID:11507767 GO_REF:0000107 MGI:2150217 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (MGI:4442100|PMID:20333246)
(MGI:5306530|PMID:22139371)
MGI PMID:20333246 PMID:22139371 MGI:4442100 MGI:5306530 NCBI chrNW_004936666:3,077,006...3,102,469
Ensembl chrNW_004936666:3,076,778...3,103,649
JBrowse link
G Calb1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,858,344...3,881,985
Ensembl chrNW_004936544:3,858,344...3,882,106
JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3696487|PMID:17234588) MGI
Ensembl
PMID:17234588 GO_REF:0000107 MGI:3696487 NCBI chrNW_004936567:6,347,661...6,559,731
Ensembl chrNW_004936567:6,366,489...6,559,766
JBrowse link
G Fat3 FAT atypical cadherin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5292419|PMID:21903076) MGI
Ensembl
PMID:21903076 GO_REF:0000107 MGI:5292419 NCBI chrNW_004936674:1,770,884...2,104,909
Ensembl chrNW_004936674:1,775,744...2,374,883
JBrowse link
G Fjx1 four-jointed box kinase 1 acts_upstream_of_or_within ISO (MGI:5292419|PMID:21903076) MGI PMID:21903076 MGI:5292419 NCBI chrNW_004936533:2,585,907...2,589,113 JBrowse link
G Foxn4 forkhead box N4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:1,061,907...1,081,350
Ensembl chrNW_004936769:1,062,061...1,080,444
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:2,293,740...2,353,450
Ensembl chrNW_004936690:2,265,849...2,274,199
Ensembl chrNW_004936690:2,265,849...2,274,199
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Irx6 iroquois homeobox 6 acts_upstream_of_or_within ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chrNW_004936475:7,665,100...7,672,132
Ensembl chrNW_004936475:7,665,841...7,670,582
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588182|PMID:16111892) MGI
Ensembl
PMID:16111892 GO_REF:0000107 MGI:3588182 NCBI chrNW_004936492:6,160,979...6,657,491
Ensembl chrNW_004936492:6,289,517...6,659,465
JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
G LOC101972040 phospholipid-transporting ATPase IB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936688:299,831...925,444
Ensembl chrNW_004936688:305,742...925,223
JBrowse link
G Megf11 multiple EGF like domains 11 involved_in ISO (MGI:5316136|PMID:22407321) UniProt PMID:22407321 MGI:5316136 NCBI chrNW_004936471:26,119,146...26,437,057
Ensembl chrNW_004936471:26,114,429...26,437,449
JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6163329|PMID:29654250) MGI
Ensembl
PMID:29654250 GO_REF:0000107 MGI:6163329 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328
JBrowse link
G Prom1 prominin 1 involved_in ISO (MGI:3838023|PMID:19228982) UniProt PMID:19228982 MGI:3838023 NCBI chrNW_004936477:11,878,261...12,017,228
Ensembl chrNW_004936477:11,878,012...12,018,177
JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:4,978,896...4,980,648
Ensembl chrNW_004936520:4,978,896...4,980,648
JBrowse link
G Ptprm protein tyrosine phosphatase receptor type M involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936670:890,316...1,692,033
Ensembl chrNW_004936670:890,310...1,692,041
JBrowse link
G Rdh13 retinol dehydrogenase 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462166|PMID:22605914) MGI
Ensembl
PMID:22605914 GO_REF:0000107 MGI:5462166 NCBI chrNW_004936886:356,068...368,525
Ensembl chrNW_004936886:355,879...368,608
JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055638|PMID:15326152)
(MGI:2179152|PMID:11983912)
MGI
Ensembl
PMID:11983912 PMID:15326152 GO_REF:0000107 MGI:2179152 MGI:3055638 NCBI chrNW_004936844:284,938...314,524
Ensembl chrNW_004936844:284,141...314,545
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:682,132...928,886
Ensembl chrNW_004936655:682,124...929,017
JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4414613|PMID:19766171) MGI
Ensembl
PMID:19766171 GO_REF:0000107 MGI:4414613 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:9,855,992...9,884,788
Ensembl chrNW_004936476:9,857,773...9,884,784
JBrowse link
G Tspan12 tetraspanin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:4,265,475...4,338,518
Ensembl chrNW_004936605:4,265,316...4,338,526
JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578715|PMID:15889094) MGI
Ensembl
PMID:15889094 GO_REF:0000107 MGI:3578715 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335
JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:64171|PMID:7903221) MGI
Ensembl
PMID:7903221 GO_REF:0000107 MGI:64171 NCBI chrNW_004936753:1,958,250...1,962,640
Ensembl chrNW_004936753:1,958,264...1,962,640
JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:64171|PMID:7903221) MGI
Ensembl
PMID:7903221 GO_REF:0000107 MGI:64171 NCBI chrNW_004936753:1,958,250...1,962,640
Ensembl chrNW_004936753:1,958,264...1,962,640
JBrowse link
roof plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353705|PMID:10693795) MGI
Ensembl
PMID:10693795 GO_REF:0000107 MGI:1353705 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761
JBrowse link
salivary gland cavitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:3826736|PMID:18816447) MGI PMID:18816447 MGI:3826736 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203
JBrowse link
G Eda ectodysplasin A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3617077|PMID:12629675) MGI
Ensembl
PMID:12629675 GO_REF:0000107 MGI:3617077 NCBI chrNW_004936777:1,545,293...1,561,109
Ensembl chrNW_004936777:1,238,272...1,557,410
JBrowse link
G Edar ectodysplasin A receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3617077|PMID:12629675) MGI
Ensembl
PMID:12629675 GO_REF:0000107 MGI:3617077 NCBI chrNW_004936829:429,667...458,943
Ensembl chrNW_004936829:429,561...458,943
JBrowse link
G Nfib nuclear factor I B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5616978|PMID:25403566) MGI
Ensembl
PMID:25403566 GO_REF:0000107 MGI:5616978 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611172|PMID:16332353) MGI
Ensembl
PMID:16332353 GO_REF:0000107 MGI:3611172 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Tgm2 transglutaminase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588002|PMID:15970210) MGI
Ensembl
PMID:15970210 GO_REF:0000107 MGI:3588002 NCBI chrNW_004936561:3,178,244...3,207,551
Ensembl chrNW_004936561:3,178,293...3,207,561
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,236,320...20,239,385
Ensembl chrNW_004936484:20,236,320...20,239,430
JBrowse link
G Acta2 actin alpha 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:266,918...283,858
Ensembl chrNW_004936735:266,754...284,377
JBrowse link
G Actb actin beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936765:667,107...670,627
Ensembl chrNW_004936765:667,053...670,672
JBrowse link
G Actbl2 actin beta like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:10,524,713...10,526,021 JBrowse link
G Actc1 actin alpha cardiac muscle 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,092,700...1,098,256
Ensembl chrNW_004936673:1,092,717...1,100,331
JBrowse link
G Actg1 actin gamma 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3053481|PMID:15194427) MGI
Ensembl
PMID:15194427 GO_REF:0000107 MGI:3053481 NCBI chrNW_004936594:5,170,711...5,173,251
Ensembl chrNW_004936594:5,170,711...5,173,247
JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:174,602...220,088
Ensembl chrNW_004936556:174,602...220,285
JBrowse link
G Actn1 actinin alpha 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936495:12,124,489...12,217,223
Ensembl chrNW_004936495:12,124,443...12,217,242
JBrowse link
G Actn2 actinin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:16,186,844...16,248,394
Ensembl chrNW_004936484:16,186,642...16,248,400
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in ISO PMID:17921333 BHF-UCL PMID:17921333 RGD:2302083 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Capn3 calpain 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046122|PMID:15138196) MGI
Ensembl
PMID:15138196 GO_REF:0000107 MGI:3046122 NCBI chrNW_004936471:5,667,839...5,711,822
Ensembl chrNW_004936471:5,668,169...5,711,075
JBrowse link
G Casq1 calsequestrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO (MGI:4453101|PMID:19920148) UniProt PMID:19920148 MGI:4453101 NCBI chrNW_004936627:1,001,681...1,069,377
Ensembl chrNW_004936627:1,001,678...1,069,438
JBrowse link
G Cfl2 cofilin 2 acts_upstream_of_or_within ISO (MGI:5316079|PMID:22343409) MGI PMID:22343409 MGI:5316079 NCBI chrNW_004936494:8,946,442...8,948,320 JBrowse link
G Csrp1 cysteine and glycine rich protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936567:2,946,721...2,967,988
Ensembl chrNW_004936567:2,946,565...2,968,010
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936654:271,067...313,251
Ensembl chrNW_004936654:271,067...289,823
JBrowse link
G Fhod3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4422153|PMID:19706596) MGI
TreeGrafter
PMID:19706596 GO_REF:0000118 MGI:4422153 RGD:8554207 NCBI chrNW_004936517:8,614,384...9,044,894
Ensembl chrNW_004936517:8,614,867...9,044,894
JBrowse link
G Flnc filamin C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,756,370...15,784,365
Ensembl chrNW_004936479:15,756,370...15,784,359
JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84974|PMID:9004034) MGI
Ensembl
PMID:9004034 GO_REF:0000107 MGI:84974 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Krt19 keratin 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,440,723...16,444,679
Ensembl chrNW_004936490:16,440,693...16,444,791
JBrowse link
G Krt8 keratin 8 involved_in ISO PMID:15247274 UniProt PMID:15247274 RGD:1600063 NCBI chrNW_004936512:10,247,049...10,254,748
Ensembl chrNW_004936512:10,246,991...10,254,827
JBrowse link
G Ldb3 LIM domain binding 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153618|PMID:11696561) MGI
Ensembl
PMID:11696561 GO_REF:0000107 MGI:2153618 NCBI chrNW_004936804:196,592...259,168
Ensembl chrNW_004936804:196,598...259,168
JBrowse link
G Lmod2 leiomodin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:1,829,187...1,838,385
Ensembl chrNW_004936605:1,830,405...1,838,400
JBrowse link
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139
Ensembl chrNW_004936470:8,216,205...8,250,978
JBrowse link
G LOC101972165 myosin-7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:967,443...991,530
Ensembl chrNW_004936722:969,384...991,129
JBrowse link
G Mybpc3 myosin binding protein C3 acts_upstream_of_or_within ISO (MGI:3616388|PMID:16380103)
(MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063)
MGI PMID:16224063 PMID:16380103 PMID:17075052 MGI:3616388 MGI:3695637 MGI:3696622 NCBI chrNW_004936562:1,871,194...1,890,092
Ensembl chrNW_004936562:1,871,410...1,889,648
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:89,717...137,866
Ensembl chrNW_004936475:89,570...126,025
JBrowse link
G Myom2 myomesin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936615:1,153,056...1,223,239
Ensembl chrNW_004936615:1,153,065...1,223,239
JBrowse link
G Myoz1 myozenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:5,420,553...5,428,470
Ensembl chrNW_004936521:5,420,317...5,428,466
JBrowse link
G Myoz2 myozenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936869:244,599...284,228
Ensembl chrNW_004936869:244,591...284,194
JBrowse link
G Mypn myopalladin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,050,638...10,142,395
Ensembl chrNW_004936521:10,050,638...10,142,395
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chrNW_004936514:7,136,797...7,141,377
Ensembl chrNW_004936514:7,136,814...7,141,206
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821563|PMID:18316483) MGI
Ensembl
PMID:18316483 GO_REF:0000107 MGI:3821563 NCBI chrNW_004936541:7,845,876...7,863,677
Ensembl chrNW_004936541:7,845,676...7,863,709
JBrowse link
G Six4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513738|PMID:15569937) MGI
Ensembl
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Synpo2l synaptopodin 2 like involved_in ISO (MGI:6102963|PMID:29206857) BHF-UCL PMID:29206857 MGI:6102963 NCBI chrNW_004936521:5,407,767...5,418,368
Ensembl chrNW_004936521:5,407,754...5,418,368
JBrowse link
G Tcap titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936886:425,331...434,546
Ensembl chrNW_004936886:425,438...435,500
JBrowse link
G Tnnt2 troponin T2, cardiac type acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1342889|PMID:10449439) MGI
TreeGrafter
PMID:10449439 GO_REF:0000118 MGI:1342889 NCBI chrNW_004936567:3,052,167...3,069,077
Ensembl chrNW_004936567:3,056,845...3,068,887
JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936816:805,360...822,044
Ensembl chrNW_004936816:805,317...822,043
JBrowse link
G Tpm1 tropomyosin 1 involved_in ISO (PMID:11273725) BHF-UCL PMID:11273725 NCBI chrNW_004936471:23,643,645...23,670,775
Ensembl chrNW_004936471:23,643,613...23,670,775
JBrowse link
G Ttn titin acts_upstream_of_or_within
involved_in
ISO (MGI:3653555|PMID:16702235)
(MGI:3760201|PMID:17360664)
(PMID:11846417), (PMID:9817758)
RGD
MGI
BHF-UCL
PMID:9817758 PMID:11034912 PMID:11846417 PMID:16702235 PMID:17360664 MGI:3653555 MGI:3760201 RGD:634444 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
G Wdr1 WD repeat domain 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5574550|PMID:24840128) MGI
TreeGrafter
Ensembl
PMID:24840128 GO_REF:0000107 GO_REF:0000118 MGI:5574550 NCBI chrNW_004936477:16,643,142...16,682,450
Ensembl chrNW_004936477:16,629,856...16,682,450
JBrowse link
G Xirp1 xin actin binding repeat containing 1 acts_upstream_of_or_within ISO (MGI:3775114|PMID:17766470) MGI PMID:17766470 MGI:3775114 NCBI chrNW_004936473:28,434,910...28,444,146
Ensembl chrNW_004936473:28,436,996...28,444,176
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chrNW_004936475:89,717...137,866
Ensembl chrNW_004936475:89,570...126,025
JBrowse link
G Tcap titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
secondary heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432296|PMID:22711842) MGI
Ensembl
PMID:22711842 GO_REF:0000107 MGI:5432296 NCBI chrNW_004936541:7,155,963...7,242,466
Ensembl chrNW_004936541:7,211,985...7,242,470
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Foxh1 forkhead box H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,789,486...7,791,067
Ensembl chrNW_004936470:7,789,541...7,791,039
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3578591|PMID:15890826) UniProt PMID:15890826 MGI:3578591 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432296|PMID:22711842) MGI
Ensembl
PMID:22711842 GO_REF:0000107 MGI:5432296 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828346|PMID:17519332) MGI
Ensembl
PMID:17519332 GO_REF:0000107 MGI:3828346 NCBI chrNW_004936527:6,643,182...6,675,708
Ensembl chrNW_004936527:6,643,075...6,675,883
JBrowse link
G Wnt11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,909,041...4,927,482
Ensembl chrNW_004936498:4,908,978...4,927,165
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chrNW_004936478:3,721,662...3,724,471
Ensembl chrNW_004936478:3,721,662...3,724,433
JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3575490|PMID:15765517) MGI
Ensembl
PMID:15765517 GO_REF:0000107 MGI:3575490 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
sensory organ boundary specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntf4 neurotrophin 4 acts_upstream_of_or_within ISO (MGI:1345538|PMID:10479455) MGI PMID:10479455 MGI:1345538 NCBI chrNW_004936664:3,017,108...3,017,955 JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcap titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
G Tmod1 tropomodulin 1 NOT|acts_upstream_of_or_within ISO (MGI:2683807|PMID:14657235) MGI PMID:14657235 MGI:2683807 NCBI chrNW_004936524:6,347,089...6,403,996
Ensembl chrNW_004936524:6,326,400...6,403,057
JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936484:20,236,320...20,239,385
Ensembl chrNW_004936484:20,236,320...20,239,430
JBrowse link
G Actc1 actin alpha cardiac muscle 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87509|PMID:9114002) MGI
Ensembl
PMID:9114002 GO_REF:0000107 MGI:87509 NCBI chrNW_004936673:1,092,700...1,098,256
Ensembl chrNW_004936673:1,092,717...1,100,331
JBrowse link
G Lmod3 leiomodin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:1,510,330...1,520,741
Ensembl chrNW_004936603:1,510,330...1,520,911
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Tcap titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chrNW_004936726:381,888...425,565
Ensembl chrNW_004936726:381,835...423,311
JBrowse link
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139
Ensembl chrNW_004936470:8,216,205...8,250,978
JBrowse link
smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5811184|PMID:27340223) MGI
Ensembl
PMID:27340223 GO_REF:0000107 MGI:5811184 NCBI chrNW_004936490:4,865,243...4,876,601
Ensembl chrNW_004936490:4,865,243...4,878,912
JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821807|PMID:18794329) MGI
Ensembl
PMID:18794329 GO_REF:0000107 MGI:3821807 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611720|PMID:16368929) MGI
Ensembl
PMID:16368929 GO_REF:0000107 MGI:3611720 NCBI chrNW_004937847:8,179...16,783
Ensembl chrNW_004937847:7,456...16,783
JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5448135|PMID:22949634) MGI
Ensembl
PMID:22949634 GO_REF:0000107 MGI:5448135 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2157654|PMID:11291865) Ensembl
MGI
PMID:11291865 GO_REF:0000107 MGI:2157654 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576
JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4459001|PMID:20346937) MGI
TreeGrafter
PMID:20346937 GO_REF:0000118 MGI:4459001 NCBI chrNW_004936483:15,555,084...15,557,060
Ensembl chrNW_004936483:15,555,084...15,557,060
JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5438472|PMID:21998026) MGI
Ensembl
PMID:21998026 GO_REF:0000107 MGI:5438472 NCBI chrNW_004936669:702,825...705,009
Ensembl chrNW_004936669:702,853...703,197
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004936495:1,433,124...1,449,409
Ensembl chrNW_004936495:1,432,598...1,442,918
JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:4459001 NCBI chrNW_004936499:7,845,180...7,848,954
Ensembl chrNW_004936499:7,846,041...7,848,400
JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4459001|PMID:20346937) MGI
Ensembl
PMID:20346937 GO_REF:0000107 MGI:4459001 NCBI chrNW_004936510:7,101,148...7,106,184
Ensembl chrNW_004936510:7,101,148...7,105,185
JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4459001|PMID:20346937) MGI
Ensembl
PMID:20346937 GO_REF:0000107 MGI:4459001 NCBI chrNW_004936501:12,402,709...12,407,571
Ensembl chrNW_004936501:12,402,724...12,407,571
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4453264|PMID:20178780) MGI
Ensembl
PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479
JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:76306|PMID:7586755) BHF-UCL PMID:7586755 MGI:76306 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3034157|PMID:14960495) MGI
Ensembl
PMID:14960495 GO_REF:0000107 MGI:3034157 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Meox1 mesenchyme homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2669571|PMID:12925591) MGI
Ensembl
PMID:12925591 GO_REF:0000107 MGI:2669571 NCBI chrNW_004936541:216,390...238,153
Ensembl chrNW_004936541:217,193...236,031
JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2669571|PMID:12925591) MGI
Ensembl
PMID:12925591 GO_REF:0000107 MGI:2669571 NCBI chrNW_004936546:2,239,442...2,304,099
Ensembl chrNW_004936546:2,239,442...2,304,099
JBrowse link
somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl interactor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577662|PMID:15755804) MGI
Ensembl
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chrNW_004936484:2,090,605...2,194,109
Ensembl chrNW_004936484:2,088,927...2,194,109
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624894|PMID:16687486) MGI
Ensembl
PMID:16687486 GO_REF:0000107 MGI:3624894 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Axin2 axin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3037351|PMID:12636920) MGI
Ensembl
PMID:12636920 GO_REF:0000107 MGI:3037351 NCBI chrNW_004936541:7,155,963...7,242,466
Ensembl chrNW_004936541:7,211,985...7,242,470
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3702797|PMID:16943278) MGI
Ensembl
PMID:16943278 GO_REF:0000107 MGI:3702797 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in IEA
ISS
Ensembl
CAFA
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934
JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578712|PMID:15902259) MGI
Ensembl
PMID:15902259 GO_REF:0000107 MGI:3578712 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Dll3 delta like canonical Notch ligand 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095777|PMID:9272948)
(MGI:3620337|PMID:15170697)
MGI
Ensembl
PMID:9272948 PMID:15170697 GO_REF:0000107 MGI:1095777 MGI:3620337 NCBI chrNW_004936661:2,322,531...2,330,150
Ensembl chrNW_004936661:2,322,531...2,329,953
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583034|PMID:15937931) MGI
Ensembl
PMID:15937931 GO_REF:0000107 MGI:3583034 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821807|PMID:18794329) MGI
Ensembl
PMID:18794329 GO_REF:0000107 MGI:3821807 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626
JBrowse link
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:20,934,524...20,935,584
Ensembl chrNW_004936471:20,934,580...20,935,557
JBrowse link
G Foxc2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:1928688|PMID:11124112) MGI PMID:11124112 MGI:1928688 NCBI chrNW_004943883:4...1,756 JBrowse link
G Hes7 hes family bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046002|PMID:15170214)
(MGI:2152470|PMID:11641270), (MGI:4367298|PMID:19779553)
MGI
Ensembl
PMID:11641270 PMID:15170214 PMID:19779553 GO_REF:0000107 MGI:2152470 MGI:3046002 MGI:4367298 NCBI chrNW_004936595:1,352,621...1,355,177
Ensembl chrNW_004936595:1,352,621...1,356,113
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583034|PMID:15937931)
(MGI:3709911|PMID:17325035)
MGI
Ensembl
PMID:15937931 PMID:17325035 GO_REF:0000107 MGI:3583034 MGI:3709911 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3510574|PMID:15545629)
(MGI:1334099|PMID:10090727)
MGI
Ensembl
PMID:10090727 PMID:15545629 GO_REF:0000107 MGI:1334099 MGI:3510574 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3774705|PMID:18234727) MGI
Ensembl
PMID:18234727 GO_REF:0000107 MGI:3774705 NCBI chrNW_004936823:283,207...290,970
Ensembl chrNW_004936823:283,205...290,986
JBrowse link
G LOC101972150 protocadherin-8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2451199|PMID:12591245) MGI
Ensembl
PMID:12591245 GO_REF:0000107 MGI:2451199 NCBI chrNW_004936667:716,802...721,441
Ensembl chrNW_004936667:716,625...721,503
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4839544|PMID:20589884) MGI
Ensembl
PMID:20589884 GO_REF:0000107 MGI:4839544 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195
JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:3578712|PMID:15902259) MGI PMID:15902259 MGI:3578712 NCBI chrNW_004936483:15,555,084...15,557,060
Ensembl chrNW_004936483:15,555,084...15,557,060
JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3603078|PMID:16000382) MGI
Ensembl
PMID:16000382 GO_REF:0000107 MGI:3603078 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637
JBrowse link
G Msgn1 mesogenin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928575|PMID:11124811), (MGI:5545970|PMID:21750544) MGI
Ensembl
PMID:11124811 PMID:21750544 GO_REF:0000107 MGI:1928575 MGI:5545970 NCBI chrNW_004936493:13,129,883...13,130,464
Ensembl chrNW_004936493:13,129,883...13,130,464
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1861090|PMID:10929709)
(MGI:78390|PMID:8565825)
(MGI:3849775|PMID:19531352)
MGI
Ensembl
PMID:8565825 PMID:10929709 PMID:19531352 GO_REF:0000107 MGI:1861090 MGI:3849775 MGI:78390 NCBI chrNW_004936698:1,609,227...1,611,283
Ensembl chrNW_004936698:1,609,227...1,611,283
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:76810|PMID:7588068) MGI
Ensembl
PMID:7588068 GO_REF:0000107 MGI:76810 NCBI chrNW_004936698:1,599,149...1,600,989
Ensembl chrNW_004936698:1,599,101...1,601,078
JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chrNW_004936509:11,525,764...11,624,833
Ensembl chrNW_004936509:11,524,556...11,624,621
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (MGI:1267297|PMID:9621431) BHF-UCL PMID:9621431 MGI:1267297 NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334
JBrowse link
G Nle1 notchless homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5608942|PMID:24875805) Ensembl
MGI
PMID:24875805 GO_REF:0000107 MGI:5608942 NCBI chrNW_004936538:101,245...109,796
Ensembl chrNW_004936538:101,047...109,873
JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO (MGI:4459579|PMID:20484223) MGI PMID:20484223 MGI:4459579 NCBI chrNW_004936501:8,246,927...8,273,258 JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3590033|PMID:16093716) MGI
Ensembl
PMID:16093716 GO_REF:0000107 MGI:3590033 NCBI chrNW_004936620:3,765,481...3,773,779
Ensembl chrNW_004936620:3,765,444...3,776,467
JBrowse link
G Plxna2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2660984|PMID:12697902) MGI
Ensembl
PMID:12697902 GO_REF:0000107 MGI:2660984 NCBI chrNW_004936485:19,111,704...19,137,689
Ensembl chrNW_004936485:19,111,675...19,137,611
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1267118|PMID:9636176) MGI
Ensembl
PMID:9636176 GO_REF:0000107 MGI:1267118 NCBI chrNW_004936536:6,408,066...6,427,864
Ensembl chrNW_004936536:6,408,060...6,429,589
JBrowse link
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004936529:8,885,803...9,034,217
Ensembl chrNW_004936529:8,920,243...9,033,865
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624894|PMID:16687486) MGI
Ensembl
PMID:16687486 GO_REF:0000107 MGI:3624894 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553)
(MGI:87649|PMID:9153393)
MGI
Ensembl
PMID:9153393 PMID:10557208 PMID:19779553 GO_REF:0000107 MGI:1347695 MGI:4367298 MGI:87649 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553) MGI PMID:10557208 PMID:19779553 MGI:1347695 MGI:4367298 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367298|PMID:19779553) MGI
Ensembl
PMID:19779553 GO_REF:0000107 MGI:4367298 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797
JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3715395|PMID:17531978) MGI
Ensembl
PMID:17531978 GO_REF:0000107 MGI:3715395 NCBI chrNW_004936510:7,101,148...7,106,184
Ensembl chrNW_004936510:7,101,148...7,105,185
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:3037488|PMID:14745966) MGI PMID:14745966 MGI:3037488 NCBI chrNW_004936796:630,307...675,157
Ensembl chrNW_004936796:630,756...674,279
JBrowse link
G Sema3c semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:903,306...1,063,024
Ensembl chrNW_004936810:903,304...1,063,024
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618960|PMID:16467359) MGI
Ensembl
PMID:16467359 GO_REF:0000107 MGI:3618960 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618960|PMID:16467359) MGI
Ensembl
PMID:16467359 GO_REF:0000107 MGI:3618960 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618021|PMID:15183723) MGI
Ensembl
PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3044041|PMID:15155583) MGI
TreeGrafter
PMID:15155583 GO_REF:0000118 MGI:3044041 NCBI chrNW_004936510:6,366,450...6,396,056
Ensembl chrNW_004936510:6,366,846...6,393,882
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056222|PMID:15384171)
(MGI:3701028|PMID:16835439)
(MGI:64493|PMID:8293872)
MGI
TreeGrafter
Ensembl
PMID:8293872 PMID:15384171 PMID:16835439 GO_REF:0000107 GO_REF:0000118 MGI:3056222 MGI:3701028 MGI:64493 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
JBrowse link
G Tcap titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4453264|PMID:20178780) MGI
Ensembl
PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709913|PMID:17320900) MGI
Ensembl
PMID:17320900 GO_REF:0000107 MGI:3709913 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Ttn titin involved_in ISO (MGI:1314551|PMID:9817758) BHF-UCL PMID:9817758 MGI:1314551 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611726|PMID:16291790), (MGI:64780|PMID:8299937)
(MGI:3037351|PMID:12636920)
MGI
Ensembl
PMID:8299937 PMID:12636920 PMID:16291790 GO_REF:0000107 MGI:3037351 MGI:3611726 MGI:64780 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512) MGI
Ensembl
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3708426|PMID:17116431) MGI
Ensembl
PMID:17116431 GO_REF:0000107 MGI:3708426 NCBI chrNW_004936527:7,760,609...7,785,360
Ensembl chrNW_004936527:7,760,719...7,785,391
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:3590396|PMID:16157277), (MGI:3624924|PMID:16598713) MGI PMID:16157277 PMID:16598713 MGI:3590396 MGI:3624924 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link
specification of animal organ identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4818701|PMID:20615956) MGI
Ensembl
PMID:20615956 GO_REF:0000107 MGI:4818701 NCBI chrNW_004936469:17,481,049...17,489,535
Ensembl chrNW_004936469:17,479,842...17,490,710
JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058
JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950
JBrowse link
G Irx1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936634:3,130,197...3,135,273
Ensembl chrNW_004936634:3,130,167...3,135,537
JBrowse link
G Irx2 iroquois homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936634:3,830,617...3,834,494
Ensembl chrNW_004936634:3,829,663...3,834,806
JBrowse link
G Irx3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:6,810,678...6,813,186
Ensembl chrNW_004936475:6,810,666...6,813,192
JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058
JBrowse link
Spemann organizer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH12orf43 chromosome unknown C12orf43 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936668:51,572...61,873
Ensembl chrNW_004936668:51,531...61,403
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
Spemann organizer formation at the anterior end of the primitive streak term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
sperm individualization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spem1 spermatid maturation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3708402|PMID:17426145) MGI
TreeGrafter
Ensembl
PMID:17426145 GO_REF:0000107 GO_REF:0000118 MGI:3708402 NCBI chrNW_004936595:704,717...706,357
Ensembl chrNW_004936595:705,138...706,328
JBrowse link
G Spem3 SPEM family member 3 involved_in IEA TreeGrafter GO_REF:0000118
spleen trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc40a1 solute carrier family 40 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578034|PMID:15342464) MGI
Ensembl
PMID:15342464 GO_REF:0000107 MGI:3578034 NCBI chrNW_004936506:8,396,593...8,415,069
Ensembl chrNW_004936506:8,396,912...8,416,374
JBrowse link
sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgra2 adhesion G protein-coupled receptor A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509072|PMID:23918385) MGI
TreeGrafter
Ensembl
PMID:23918385 GO_REF:0000107 GO_REF:0000118 MGI:5509072 NCBI chrNW_004936710:1,258,088...1,296,346
Ensembl chrNW_004936710:1,257,931...1,298,885
JBrowse link
G Angpt1 angiopoietin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190
JBrowse link
G Cdc42 cell division cycle 42 ISO RGD PMID:18562481 RGD:5688290 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Cdh13 cadherin 13 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936641:3,925,185...4,223,421
Ensembl chrNW_004936641:3,931,033...4,224,101
JBrowse link
G Clec14a C-type lectin domain containing 14A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5881854|PMID:27991863) MGI
Ensembl
PMID:27991863 GO_REF:0000107 MGI:5881854 NCBI chrNW_004936494:12,112,163...12,115,836
Ensembl chrNW_004936494:12,114,371...12,115,787
JBrowse link
G Dsc1 desmocollin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936682:2,013,414...2,040,148
Ensembl chrNW_004936682:2,013,414...2,040,148
JBrowse link
G Dsc2 desmocollin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936682:2,057,331...2,091,034
Ensembl chrNW_004936682:2,057,190...2,164,429
JBrowse link
G Dsc3 desmocollin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936682:2,126,394...2,161,672
Ensembl chrNW_004936682:2,057,190...2,164,429
JBrowse link
G E2f7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:5,206,135...5,245,324
Ensembl chrNW_004936568:5,206,135...5,244,450
JBrowse link
G E2f8 E2F transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:322,863...339,365
Ensembl chrNW_004936654:322,863...338,699
JBrowse link
G Eng endoglin NOT|involved_in ISO (MGI:4368063|PMID:19703439) BHF-UCL PMID:19703439 MGI:4368063 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Esm1 endothelial cell specific molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,750,732...12,758,262
Ensembl chrNW_004936480:12,750,731...12,758,286
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:4360124|PMID:19758562) MGI PMID:19758562 MGI:4360124 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Flt4 fms related receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:240,572...281,925
Ensembl chrNW_004936739:236,510...281,729
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (MGI:6415430|PMID:32369453) MGI PMID:32369453 MGI:6415430 NCBI chrNW_004936488:4,653,891...4,713,982
Ensembl chrNW_004936488:4,653,692...4,712,313
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,760,924...1,771,022
Ensembl chrNW_004936594:1,760,853...1,770,765
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
Ensembl
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G Loxl2 lysyl oxidase like 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936555:6,781,563...6,865,662
Ensembl chrNW_004936555:6,781,321...6,865,768
JBrowse link
G Naxe NAD(P)HX epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,769,583...5,772,633
Ensembl chrNW_004936580:5,769,633...5,772,582
JBrowse link
G Notch1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588555|PMID:15809373) Ensembl
MGI
PMID:15809373 GO_REF:0000107 MGI:3588555 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
Ensembl
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chrNW_004936669:702,825...705,009
Ensembl chrNW_004936669:702,853...703,197
JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936665:1,654,045...1,690,955
Ensembl chrNW_004936665:1,668,311...1,690,918
JBrowse link
G Parva parvin alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,977,909...6,130,814
Ensembl chrNW_004936528:5,977,913...6,130,956
JBrowse link
G Pgf placental growth factor involved_in ISO
IEA
RGD
TreeGrafter
PMID:21408222 GO_REF:0000118 RGD:6483775 NCBI chrNW_004936488:4,098,187...4,111,108
Ensembl chrNW_004936488:4,098,225...4,111,142
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,479,899...17,481,788
Ensembl chrNW_004936490:17,479,650...17,482,716
JBrowse link
G Reck reversion inducing cysteine rich protein with kazal motifs involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:4,021,666...4,099,703
Ensembl chrNW_004936524:4,021,660...4,099,705
JBrowse link
G Rnf213 ring finger protein 213 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:4,241,006...4,331,841
Ensembl chrNW_004936594:4,241,396...4,331,868
JBrowse link
G Rspo3 R-spondin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936639:2,475,710...2,552,725
Ensembl chrNW_004936639:2,475,710...2,552,725
JBrowse link
G Sema3e semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936734:1,850,709...2,085,541
Ensembl chrNW_004936734:1,850,673...2,084,891
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of
involved_in
ISO
IEA
(PMID:31368162) BHF-UCL
Ensembl
PMID:31368162 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
G Tmem215 transmembrane protein 215 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6507628|PMID:30370660) MGI
Ensembl
PMID:30370660 GO_REF:0000107 MGI:6507628 NCBI chrNW_004936524:1,395,860...1,402,013
Ensembl chrNW_004936524:1,400,526...1,401,233
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:4,963,161...4,966,258
Ensembl chrNW_004936599:4,962,222...4,966,264
JBrowse link
G Vegfc vascular endothelial growth factor C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936516:7,217,543...7,332,531
Ensembl chrNW_004936516:7,217,543...7,332,559
JBrowse link
G Vegfd vascular endothelial growth factor D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:4,761,827...4,794,751
Ensembl chrNW_004936470:4,762,332...4,793,938
JBrowse link
G Vstm4 V-set and transmembrane domain containing 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6393395|PMID:31698979) MGI
Ensembl
PMID:31698979 GO_REF:0000107 MGI:6393395 NCBI chrNW_004936728:1,146,800...1,239,264
Ensembl chrNW_004936728:1,146,680...1,239,773
JBrowse link
submandibular salivary gland formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 ISO RGD PMID:18784978 RGD:5688282 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3688470|PMID:11062007) MGI
Ensembl
PMID:11062007 GO_REF:0000107 MGI:3688470 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
syncytium formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccng1 cyclin G1 ISO RGD PMID:9244236 RGD:2316030 NCBI chrNW_004936515:614,287...621,213
Ensembl chrNW_004936515:614,290...619,963
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1859082|PMID:10834928) MGI
Ensembl
PMID:10834928 GO_REF:0000107 MGI:1859082 NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
JBrowse link
syncytium formation by plasma membrane fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of ISO (MGI:5049808|PMID:21558372) MGI PMID:21558372 MGI:5049808 NCBI chrNW_004936476:7,724,666...7,738,401 JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of ISO (MGI:5049808|PMID:21558372) MGI PMID:21558372 MGI:5049808 NCBI chrNW_004936512:11,490,521...11,493,655
Ensembl chrNW_004936512:11,490,168...11,493,974
JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5648606|PMID:25184477) MGI
Ensembl
PMID:25184477 GO_REF:0000107 MGI:5648606 NCBI chrNW_004936557:622,947...661,495
Ensembl chrNW_004936557:623,934...661,857
JBrowse link
tendon cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Mkx mohawk homeobox acts_upstream_of_or_within ISO (MGI:5287220|PMID:20696843) MGI
RGD
PMID:20696843 PMID:27370800 MGI:5287220 RGD:40924660 NCBI chrNW_004936613:2,019,815...2,083,724
Ensembl chrNW_004936613:2,019,783...2,084,267
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:3715390|PMID:17567668), (MGI:4418577|PMID:20059955) UniProt PMID:17567668 PMID:20059955 MGI:3715390 MGI:4418577 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Tnmd tenomodulin involved_in ISO PMID:21412429 UniProt PMID:21412429 RGD:8553701 NCBI chrNW_004936584:5,803,309...5,818,643
Ensembl chrNW_004936584:5,803,309...5,818,647
JBrowse link
tendon formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mkx mohawk homeobox acts_upstream_of_or_within ISO (MGI:4457966|PMID:20498044)
(MGI:5287220|PMID:20696843)
(MGI:4881565|PMID:21254332)
MGI PMID:20498044 PMID:20696843 PMID:21254332 MGI:4457966 MGI:4881565 MGI:5287220 NCBI chrNW_004936613:2,019,815...2,083,724
Ensembl chrNW_004936613:2,019,783...2,084,267
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:2679803|PMID:14568104), (MGI:3715390|PMID:17567668) UniProt PMID:14568104 PMID:17567668 MGI:2679803 MGI:3715390 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
trachea formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4361775|PMID:19805295) MGI
Ensembl
PMID:19805295 GO_REF:0000107 MGI:4361775 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5588044|PMID:25100655) MGI
Ensembl
PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5588044|PMID:25100655) MGI
Ensembl
PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chrNW_004936588:2,338,127...2,377,090
Ensembl chrNW_004936588:2,336,858...2,377,090
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5588044|PMID:25100655) MGI
Ensembl
PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5588044|PMID:25100655) MGI
Ensembl
PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3829327|PMID:18990706) MGI
Ensembl
PMID:18990706 GO_REF:0000107 MGI:3829327 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
tracheoesophageal septum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1277744|PMID:9731532) MGI
Ensembl
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
tricuspid valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3574376|PMID:15297376) MGI
Ensembl
PMID:15297376 GO_REF:0000107 MGI:3574376 NCBI chrNW_004936639:3,705,225...3,714,696
Ensembl chrNW_004936639:3,703,447...3,716,820
JBrowse link
G Zfpm1 zinc finger protein, FOG family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,130,073...1,162,022
Ensembl chrNW_004936641:1,130,446...1,138,473
JBrowse link
trochlear nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired like homeobox 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,539,939...1,544,469
Ensembl chrNW_004936498:1,540,484...1,544,360
JBrowse link
trophectodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:1095761|PMID:9272950) MGI PMID:9272950 MGI:1095761 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Bysl bystin like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3700849|PMID:17242206) MGI
Ensembl
PMID:17242206 GO_REF:0000107 MGI:3700849 NCBI chrNW_004936476:17,887,998...17,896,598
Ensembl chrNW_004936476:17,888,335...17,896,268
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:3695521|PMID:17138661) MGI PMID:17138661 MGI:3695521 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203
JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698)
(MGI:3612803|PMID:16325584)
(MGI:3578587|PMID:15788452), (MGI:4819480|PMID:20404091)
(MGI:3612803|PMID:16325584), (MGI:5644240|PMID:25397698)
MGI PMID:15788452 PMID:16325584 PMID:20404091 PMID:25397698 MGI:3578587 MGI:3612803 MGI:4819480 MGI:5644240 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628724|PMID:16579983) MGI
Ensembl
PMID:16579983 GO_REF:0000107 MGI:3628724 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:10,302,091...10,384,945
Ensembl chrNW_004936475:10,302,087...10,384,957
JBrowse link
G Cnot2 CCR4-NOT transcription complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:7,938,934...8,040,409
Ensembl chrNW_004936545:7,938,934...8,042,117
JBrowse link
G Cnot3 CCR4-NOT transcription complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936994:256,022...271,235
Ensembl chrNW_004936994:258,938...273,765
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5528755|PMID:24036311) MGI
Ensembl
PMID:24036311 GO_REF:0000107 MGI:5528755 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3612803|PMID:16325584) MGI
Ensembl
PMID:16325584 GO_REF:0000107 MGI:3612803 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179
JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO (MGI:3604420|PMID:16039639) MGI PMID:16039639 MGI:3604420 NCBI chrNW_004936692:951,394...953,612
Ensembl chrNW_004936692:951,562...953,001
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175
JBrowse link
G Hopx HOP homeobox acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3722454|PMID:17576768)
(PMID:17576768)
MGI
Ensembl
PMID:17576768 GO_REF:0000107 MGI:3722454 NCBI chrNW_004936482:18,841,220...18,872,136
Ensembl chrNW_004936482:18,840,434...18,850,005
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1332277|PMID:10022836)
(MGI:2138058|PMID:11456449)
MGI
Ensembl
PMID:10022836 PMID:11456449 GO_REF:0000107 MGI:1332277 MGI:2138058 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2138058|PMID:11456449) MGI
Ensembl
PMID:11456449 GO_REF:0000107 MGI:2138058 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (MGI:3612803|PMID:16325584) MGI PMID:16325584 MGI:3612803 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5644240|PMID:25397698) MGI
Ensembl
PMID:25397698 GO_REF:0000107 MGI:5644240 NCBI chrNW_004936576:1,532,036...1,574,858
Ensembl chrNW_004936576:1,532,036...1,574,858
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of ISO (MGI:3718872|PMID:17507372) MGI PMID:17507372 MGI:3718872 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3717030|PMID:17584888) MGI
Ensembl
PMID:17584888 GO_REF:0000107 MGI:3717030 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17576768) MGI
Ensembl
PMID:17576768 GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4819480|PMID:20404091) MGI PMID:20404091 MGI:4819480 NCBI chrNW_004936875:491,032...498,732
Ensembl chrNW_004936875:491,017...498,734
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of
involved_in
ISO
IEA
(MGI:6116315|PMID:26902285) MGI
Ensembl
PMID:26902285 GO_REF:0000107 MGI:6116315 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567
JBrowse link
trophectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (MGI:1355046|PMID:10742100) MGI PMID:10742100 MGI:1355046 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Prickle2 prickle planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:5319591|PMID:22333836) MGI PMID:22333836 MGI:5319591 NCBI chrNW_004936637:2,225,400...2,299,307
Ensembl chrNW_004936637:2,003,209...2,333,278
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3770613|PMID:18083014) MGI
Ensembl
PMID:18083014 GO_REF:0000107 MGI:3770613 NCBI chrNW_004936606:3,310,905...3,358,519
Ensembl chrNW_004936606:3,310,823...3,356,509
JBrowse link
trophectodermal cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1345775|PMID:10500095) MGI
Ensembl
PMID:10500095 GO_REF:0000107 MGI:1345775 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316
JBrowse link
G Esrrb estrogen related receptor beta acts_upstream_of_or_within ISO (MGI:1095811|PMID:9285590) MGI PMID:9285590 MGI:1095811 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2138058|PMID:11456449) MGI
Ensembl
PMID:11456449 GO_REF:0000107 MGI:2138058 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833777|PMID:19100728) MGI
Ensembl
PMID:19100728 GO_REF:0000107 MGI:3833777 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh8 atonal bHLH transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,529,508...1,552,148
Ensembl chrNW_004936712:1,529,420...1,552,185
JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703466|PMID:17276340) MGI
Ensembl
PMID:17276340 GO_REF:0000107 MGI:3703466 NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,802,761...5,814,226
Ensembl chrNW_004936532:5,799,342...5,814,199
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936526:7,202,147...7,431,455
Ensembl chrNW_004936526:7,202,150...7,430,874
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta acts_upstream_of_or_within
involved_in
ISO (MGI:6109167|PMID:29118970) MGI PMID:29118970 MGI:6109167 NCBI chrNW_004936470:42,444,671...42,470,548
Ensembl chrNW_004936470:42,445,412...42,470,900
JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1270048|PMID:9637690) MGI
Ensembl
PMID:9637690 GO_REF:0000107 MGI:1270048 NCBI chrNW_004936732:1,773,043...1,947,081
Ensembl chrNW_004936732:1,773,028...1,946,696
JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:65439|PMID:7517224) MGI
Ensembl
PMID:7517224 GO_REF:0000107 MGI:65439 NCBI chrNW_004936673:1,424,513...1,838,277
Ensembl chrNW_004936673:1,432,927...1,719,966
JBrowse link
G Kif26b kinesin family member 26B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4454194|PMID:20439720) MGI
Ensembl
PMID:20439720 GO_REF:0000107 MGI:4454194 NCBI chrNW_004936526:5,250,154...5,434,699
Ensembl chrNW_004936526:5,255,227...5,434,697
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3665498|PMID:16839447)
(MGI:2149437|PMID:11688560)
MGI
UniProt
PMID:11688560 PMID:16839447 MGI:2149437 MGI:3665498 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413
JBrowse link
vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipor2 adiponectin receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:1,911,104...2,007,109
Ensembl chrNW_004936606:1,948,743...2,007,163
JBrowse link
G Cd34 CD34 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,030,788...5,051,864
Ensembl chrNW_004936557:5,030,441...5,051,868
JBrowse link
G Gata2 GATA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Hpse heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,308,350...1,341,421
Ensembl chrNW_004936738:1,308,345...1,343,145
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Mcam melanoma cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,235,914...4,244,981
Ensembl chrNW_004936542:4,237,010...4,244,462
JBrowse link
G Ndnf neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:593,848...624,974
Ensembl chrNW_004936662:594,331...624,980
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,779,398...3,798,074
Ensembl chrNW_004936524:3,779,392...3,798,501
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:3,837,891...3,982,334
Ensembl chrNW_004936483:3,834,700...3,919,766
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4355491|PMID:19546853) MGI
Ensembl
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
vestibulocochlear nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8b1 ATPase phospholipid transporting 8B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:6,652,240...6,712,960
Ensembl chrNW_004936497:6,652,185...6,713,034
JBrowse link
G Neurog1 neurogenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,708,001...2,709,702
Ensembl chrNW_004936597:2,708,691...2,709,425
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Tifab TIFA inhibitor involved_in ISO (PMID:23419067) CAFA PMID:23419067 NCBI chrNW_004936597:2,620,661...2,621,302 JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3766861|PMID:17881493) MGI
Ensembl
PMID:17881493 GO_REF:0000107 MGI:3766861 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568
JBrowse link
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3793375|PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055483|PMID:15469977) MGI
TreeGrafter
PMID:15469977 GO_REF:0000118 MGI:3055483 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793375|PMID:18257070) MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793375|PMID:18257070) MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO RGD PMID:25281935 RGD:12832757 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15868
    developmental process 6305
      anatomical structure formation involved in morphogenesis 1231
        Spemann organizer formation + 4
        adenohypophysis formation 0
        adrenal cortex formation 2
        aerenchyma formation 0
        amelogenesis + 31
        amnioserosa formation 0
        angiogenesis + 512
        angiogenic sprout fusion + 2
        animal organ formation + 76
        anterior neural plate formation 0
        anther wall tapetum formation + 0
        apical ectodermal ridge formation + 0
        arthrospore formation 0
        beak formation 0
        blastocyst formation + 60
        blood microparticle formation + 2
        cardiac chamber formation + 12
        cellular component assembly involved in morphogenesis + 145
        cellularization + 2
        central nervous system formation 1
        cephalic furrow formation 0
        cerebellar Purkinje cell layer formation + 21
        cerebellar cortex formation + 35
        cerebellar granular layer formation + 12
        cerebellar molecular layer formation + 1
        cerebellum formation 1
        chorion micropyle formation 0
        cleistothecium formation 0
        cranial nerve formation + 10
        dentinogenesis + 7
        dorsal appendage formation 0
        dorsal motor nucleus of vagus nerve formation + 0
        ectodermal placode formation + 16
        eggshell formation + 0
        embryonic camera-type eye formation + 11
        endocardial cushion formation + 31
        endocardium formation 4
        floor plate formation 3
        floral whorl formation 0
        flower formation 0
        formation of anatomical boundary + 7
        formation of infection structure + 0
        formation of primary germ layer + 134
        fungiform papilla formation 4
        ganglion formation + 0
        germarium-derived egg chamber formation + 0
        germinal center formation + 16
        heart rudiment formation + 0
        heart valve formation + 16
        hindbrain formation + 1
        hypophysis formation 0
        inferior olivary nucleus formation 0
        kidney rudiment formation + 3
        labyrinthine layer formation 0
        lamina terminalis formation 0
        layer formation in cerebral cortex + 16
        leaflet formation + 0
        limb bud formation + 9
        locus ceruleus formation 0
        lung lobe formation 1
        lymphangiogenesis + 19
        mammary gland bud formation + 2
        mammary gland formation + 9
        medulla oblongata formation + 0
        metanephric cap formation + 0
        neural crest formation + 14
        neural fold elevation formation 3
        neural fold formation + 9
        neural fold hinge point formation 0
        neural keel formation 0
        neural plate formation + 1
        neural rod formation + 0
        neurohypophysis formation 0
        nipple sheath formation 1
        nodulation 0
        notochord formation 4
        optic cup formation involved in camera-type eye development 1
        optic vesicle formation 0
        otolith formation + 0
        plant organ formation + 0
        platelet formation + 23
        pons formation + 0
        posterior neural plate formation + 0
        prechordal plate formation 1
        primitive streak formation + 12
        renal capsule formation + 0
        renal vesicle formation + 8
        reproductive blastospore formation 0
        retina layer formation + 24
        rhombomere formation + 1
        roof plate formation 1
        selective angioblast sprouting + 0
        somitogenesis + 74
        sporulation resulting in formation of a cellular spore + 0
        stomatal complex formation 0
        submandibular salivary gland formation 2
        superior olivary nucleus formation 0
        syncytium formation + 66
        taste bud formation 0
        tendon formation + 5
        trabecula formation + 30
        tracheal pit formation in open tracheal system 0
        tracheoesophageal septum formation 1
        tube formation + 180
        ventral furrow formation + 0
Path 2
Term Annotations click to browse term
  biological_process 15868
    developmental process 6305
      anatomical structure development 5937
        anatomical structure morphogenesis 2764
          anatomical structure formation involved in morphogenesis 1231
            Spemann organizer formation + 4
            adenohypophysis formation 0
            adrenal cortex formation 2
            aerenchyma formation 0
            amelogenesis + 31
            amnioserosa formation 0
            angiogenesis + 512
            angiogenic sprout fusion + 2
            animal organ formation + 76
            anterior neural plate formation 0
            anther wall tapetum formation + 0
            apical ectodermal ridge formation + 0
            arthrospore formation 0
            beak formation 0
            blastocyst formation + 60
            blood microparticle formation + 2
            cardiac chamber formation + 12
            cellular component assembly involved in morphogenesis + 145
            cellularization + 2
            central nervous system formation 1
            cephalic furrow formation 0
            cerebellar Purkinje cell layer formation + 21
            cerebellar cortex formation + 35
            cerebellar granular layer formation + 12
            cerebellar molecular layer formation + 1
            cerebellum formation 1
            chorion micropyle formation 0
            cleistothecium formation 0
            cranial nerve formation + 10
            dentinogenesis + 7
            dorsal appendage formation 0
            dorsal motor nucleus of vagus nerve formation + 0
            ectodermal placode formation + 16
            eggshell formation + 0
            embryonic camera-type eye formation + 11
            endocardial cushion formation + 31
            endocardium formation 4
            floor plate formation 3
            floral whorl formation 0
            flower formation 0
            formation of anatomical boundary + 7
            formation of infection structure + 0
            formation of primary germ layer + 134
            fungiform papilla formation 4
            ganglion formation + 0
            germarium-derived egg chamber formation + 0
            germinal center formation + 16
            heart rudiment formation + 0
            heart valve formation + 16
            hindbrain formation + 1
            hypophysis formation 0
            inferior olivary nucleus formation 0
            kidney rudiment formation + 3
            labyrinthine layer formation 0
            lamina terminalis formation 0
            layer formation in cerebral cortex + 16
            leaflet formation + 0
            limb bud formation + 9
            locus ceruleus formation 0
            lung lobe formation 1
            lymphangiogenesis + 19
            mammary gland bud formation + 2
            mammary gland formation + 9
            medulla oblongata formation + 0
            metanephric cap formation + 0
            neural crest formation + 14
            neural fold elevation formation 3
            neural fold formation + 9
            neural fold hinge point formation 0
            neural keel formation 0
            neural plate formation + 1
            neural rod formation + 0
            neurohypophysis formation 0
            nipple sheath formation 1
            nodulation 0
            notochord formation 4
            optic cup formation involved in camera-type eye development 1
            optic vesicle formation 0
            otolith formation + 0
            plant organ formation + 0
            platelet formation + 23
            pons formation + 0
            posterior neural plate formation + 0
            prechordal plate formation 1
            primitive streak formation + 12
            renal capsule formation + 0
            renal vesicle formation + 8
            reproductive blastospore formation 0
            retina layer formation + 24
            rhombomere formation + 1
            roof plate formation 1
            selective angioblast sprouting + 0
            somitogenesis + 74
            sporulation resulting in formation of a cellular spore + 0
            stomatal complex formation 0
            submandibular salivary gland formation 2
            superior olivary nucleus formation 0
            syncytium formation + 66
            taste bud formation 0
            tendon formation + 5
            trabecula formation + 30
            tracheal pit formation in open tracheal system 0
            tracheoesophageal septum formation 1
            tube formation + 180
            ventral furrow formation + 0
paths to the root