ONTOLOGY REPORT - ANNOTATIONS
Term: animal organ formation
Accession: GO:0048645
browse the term
Definition: The process pertaining to the initial formation of an animal organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ.
Synonyms: narrow_synonym: animal organ primordium initiation; initiation of an animal organ primordium
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Ar
androgen receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3716756 (PMID:17317769)
Ensembl RGD
PMID:17317769
GO_REF:0000107
NCBI chr X:67,135,317...67,304,476
Ensembl chr X:63,104,771...63,273,925
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647 (PMID:11062007)
RGD
PMID:11062007
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16887115)
Ensembl RGD
PMID:16887115
GO_REF:0000107
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
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Hoxa3
homeobox A3
acts_upstream_of_or_within
ISO
MGI:1857992 (PMID:7635047)
RGD
PMID:7635047
NCBI chr 4:82,599,860...82,643,831
Ensembl chr 4:81,269,243...81,313,218
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Nkx3-2
NK3 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1931319 (PMID:10449756)
RGD
PMID:10449756
NCBI chr14:73,396,198...73,398,585
Ensembl chr14:69,183,820...69,186,061
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:15013801)
Ensembl RGD
PMID:15013801
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Tlx1
T-cell leukemia, homeobox 1
acts_upstream_of_or_within
ISO
MGI:3581680 (PMID:11356032)
RGD
PMID:11356032
NCBI chr 1:253,954,197...253,960,458
Ensembl chr 1:244,005,057...244,011,318
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Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:10393122)
RGD
PMID:10393122
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
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Mesp1
mesoderm posterior bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2182080 (PMID:10393122)
RGD
PMID:10393122
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
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Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:10393122)
RGD
PMID:10393122
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647 (PMID:16720875)
RGD
PMID:16720875
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153811 (PMID:16720875)
RGD
PMID:16720875
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:26295701)
RGD
PMID:26295701
NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357
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Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158343 (PMID:16943278)
RGD
PMID:16943278
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
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Emp2
epithelial membrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:30773261)
UniProt RGD
PMID:30773261
GO_REF:0000024
NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733
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Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:1859153 (PMID:19654211)
RGD
PMID:19654211
NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147
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Lemd2
LEM domain nuclear envelope protein 2
involved_in
ISO
(PMID:25790465)
RGD
PMID:25790465
NCBI chr20:5,284,275...5,298,281
Ensembl chr20:5,282,397...5,296,626
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Rbm20
RNA binding motif protein 20
involved_in
IDA ISO IMP
PMID:23307558 (PMID:24584570), (PMID:27630136), (PMID:29895960), (PMID:33110103), (PMID:35041844), (PMID:35394688) (PMID:33188278) (PMID:22466703), (PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935), (PMID:34732726)
RGD
PMID:22466703 PMID:24584570 PMID:26604136 PMID:27496873 PMID:27630136 PMID:29895960 PMID:30948719 PMID:32840935 PMID:33110103 PMID:33188278 PMID:34732726 PMID:35041844 PMID:35394688 PMID:23307558 PMID:22466703 More...
RGD:152025504 , RGD:7241566
NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
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Bmp2
bone morphogenetic protein 2
involved_in
ISO ISS
(PMID:19736317) GO_REF:0000024
RGD UniProt
PMID:19736317
GO_REF:0000024
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
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Bmp4
bone morphogenetic protein 4
involved_in
ISO ISS IEA
(PMID:20702560) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:20702560
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:18297060)
RGD
PMID:18297060
NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202
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Gata5
GATA binding protein 5
involved_in
ISO
(PMID:21633169)
RGD
PMID:21633169
NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
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Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18297060), (PMID:18593560)
RGD
PMID:18297060 PMID:18593560
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
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Pou5f1
POU class 5 homeobox 1
involved_in
ISO
(PMID:19736317)
RGD
PMID:19736317
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
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Robo1
roundabout guidance receptor 1
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
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Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
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Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567|MGI:2148569 (PMID:19686689), (PMID:19805295)
Ensembl RGD
PMID:19686689 PMID:19805295
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:1261834 (PMID:19686689)
RGD
PMID:19686689
NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:46,333,998...46,374,402
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Wnt2b
Wnt family member 2B
acts_upstream_of_or_within
ISO
MGI:98954 (PMID:19686689)
RGD
PMID:19686689
NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:16720875)
RGD
PMID:16720875
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1099809 (PMID:16720875)
RGD
PMID:16720875
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
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Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:2687297 (PMID:16720875)
RGD
PMID:16720875
NCBI chr 9:87,015,960...87,112,531
Ensembl chr 9:79,568,634...79,664,042
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Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857137 (PMID:11401393), (PMID:18393306)
Ensembl RGD
PMID:11401393 PMID:18393306
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(PMID:16324690)
RGD
PMID:16324690
NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
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Sulf1
sulfatase 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:20410206) GO_REF:0000024
Ensembl RGD UniProt
PMID:20410206
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584
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Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857617 (PMID:18804104)
Ensembl RGD
PMID:18804104
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Folr1
folate receptor alpha
involved_in
ISO
(PMID:17286298)
RGD
PMID:17286298
NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667
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Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
(PMID:19620969)
RGD
PMID:19620969
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
MGI:1857137 (PMID:9806931)
RGD
PMID:9806931
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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Fgf1
fibroblast growth factor 1
acts_upstream_of_or_within
ISO
(PMID:15576401)
RGD
PMID:15576401
NCBI chr18:30,937,670...31,023,786
Ensembl chr18:30,686,581...30,772,357
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
IDA ISO
PMID:10964474 MGI:95517 (PMID:12810586)
RGD
PMID:12810586 PMID:10964474
RGD:8554722
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:15576401)
RGD
PMID:15576401
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
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Fgf3
fibroblast growth factor 3
acts_upstream_of_or_within
ISO
MGI:1099809|MGI:99604 (PMID:12810586), (PMID:15741321)
RGD
PMID:12810586 PMID:15741321
NCBI chr 1:209,430,457...209,434,832
Ensembl chr 1:200,001,261...200,005,187
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:95517 (PMID:15741321)
RGD
PMID:15741321
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
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Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
(PMID:15576401)
RGD
PMID:15576401
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
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Fgfr4
fibroblast growth factor receptor 4
acts_upstream_of_or_within
ISO
(PMID:15576401)
RGD
PMID:15576401
NCBI chr17:9,466,686...9,481,423
Ensembl chr17:9,461,547...9,476,242
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Frs2
fibroblast growth factor receptor substrate 2
acts_upstream_of_or_within
ISO
MGI:3521833 (PMID:15569927)
RGD
PMID:15569927
NCBI chr 7:54,597,182...54,678,656
Ensembl chr 7:52,711,257...52,792,743
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Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1345139 (PMID:15691764)
Ensembl RGD
PMID:15691764
GO_REF:0000107
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
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Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
MGI:96193|MGI:96203 (PMID:12050119)
RGD
PMID:12050119
NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:81,342,528...81,346,232
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Hoxc11
homeobox C11
acts_upstream_of_or_within
ISO
MGI:96172|MGI:96203 (PMID:12050119)
RGD
PMID:12050119
NCBI chr 7:135,969,707...135,973,222
Ensembl chr 7:134,091,552...134,094,738
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Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
MGI:96172|MGI:96193 (PMID:12050119)
RGD
PMID:12050119
NCBI chr 3:79,992,394...79,994,688
Ensembl chr 3:59,585,039...59,586,783
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Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:2655195 (PMID:12783782)
RGD
PMID:12783782
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
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Spry1
sprouty RTK signaling antagonist 1
acts_upstream_of_or_within
ISO
MGI:3574404 (PMID:15691764)
RGD
PMID:15691764
NCBI chr 2:122,484,995...122,490,008
Ensembl chr 2:120,556,706...120,566,189
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Pim1
Pim-1 proto-oncogene, serine/threonine kinase
involved_in
ISO
(PMID:21474815)
RGD
PMID:21474815
NCBI chr20:7,556,496...7,560,747
Ensembl chr20:7,554,921...7,559,174
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Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483
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Gng5
G protein subunit gamma 5
acts_upstream_of_or_within
ISO
(PMID:24599258)
RGD
PMID:24599258
NCBI chr 2:238,054,954...238,063,451
Ensembl chr 1:77,292,043...77,292,513 Ensembl chr11:77,292,043...77,292,513
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Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:109344 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
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Tbx1
T-box transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:19745164)
RGD
PMID:19745164
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
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Tbx5
T-box transcription factor 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2387851 (PMID:22898775)
Ensembl RGD
PMID:22898775
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
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Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724)
UniProt RGD
PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
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Wnt11
Wnt family member 11
involved_in
ISO
UniProtKB:P22725 (PMID:22569553)
RGD
PMID:22569553
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
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Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P48615 (PMID:22569553)
Ensembl RGD
PMID:22569553
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Hhex
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
MGI:2177762 (PMID:16364283)
RGD
PMID:16364283
NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042
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Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(PMID:17473173)
RGD
PMID:17473173
NCBI chr 5:7,969,931...7,998,834
Ensembl chr 5:3,188,445...3,215,572
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Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
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Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
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Ar
androgen receptor
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3716756 (PMID:17317769) GO_REF:0000107
RGD Ensembl
PMID:17317769
GO_REF:0000107
NCBI chr X:67,135,317...67,304,476
Ensembl chr X:63,104,771...63,273,925
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Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1857137 (PMID:11401393)
Ensembl RGD
PMID:11401393
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:88064 (PMID:12941620)
RGD
PMID:12941620
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (PMID:16707121)
RGD
PMID:16707121
NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574
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Nog
noggin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1862000 (PMID:18028901)
Ensembl RGD
PMID:18028901
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
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Shh
sonic hedgehog signaling molecule
NOT|acts_upstream_of_or_within
ISO
MGI:88064 (PMID:15013801)
RGD
PMID:15013801
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Tp63
tumor protein p63
acts_upstream_of_or_within
ISO
MGI:1934269 (PMID:11106548)
RGD
PMID:11106548
NCBI chr11:88,343,647...88,554,543
Ensembl chr11:74,838,859...75,049,398
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
ISO
(PMID:17537799)
RGD
PMID:17537799
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
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Wt1
WT1 transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:17537799)
UniProt RGD
PMID:17537799
GO_REF:0000024
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
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Notch1
notch receptor 1
IMP
RGD
PMID:18824567
RGD:2325311
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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Ar
androgen receptor
acts_upstream_of_or_within
ISO
MGI:1099809 (PMID:12941620)
RGD
PMID:12941620
NCBI chr X:67,135,317...67,304,476
Ensembl chr X:63,104,771...63,273,925
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12221011), (PMID:18393306)
Ensembl RGD
PMID:12221011 PMID:18393306
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19620969)
Ensembl RGD
PMID:19620969
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19008477)
Ensembl RGD
PMID:19008477
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2447758 (PMID:19620969)
Ensembl RGD
PMID:19620969
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Axin2
axin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96522 (PMID:22711842)
Ensembl RGD
PMID:22711842
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
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Bmp4
bone morphogenetic protein 4
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:20702560)
Ensembl UniProt RGD
PMID:20702560
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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Foxh1
forkhead box H1
involved_in
ISO
(PMID:15363409)
RGD
PMID:15363409
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Isl1
ISL LIM homeobox 1
involved_in
ISO IEA
(PMID:20520780) GO_REF:0000107
RGD Ensembl
PMID:20520780
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:15890826)
UniProt RGD
PMID:15890826
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18593560)
RGD
PMID:18593560
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1270862|MGI:3583755 (PMID:22711842)
RGD
PMID:22711842
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Smarcd3
SWI/SNF related BAF chromatin remodeling complex subunit D3
acts_upstream_of_or_within
ISO
MGI:2148567 (PMID:17519332)
RGD
PMID:17519332
NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
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Wnt11
Wnt family member 11
involved_in
ISO
UniProtKB:P22725 (PMID:22569553)
RGD
PMID:22569553
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P48615 (PMID:22569553)
Ensembl RGD
PMID:22569553
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Ntf4
neurotrophin 4
involved_in acts_upstream_of_or_within
ISS ISO
PMID:10479455 MGI:1933845 (PMID:10479455)
RGD
PMID:10479455 PMID:10479455
RGD:8554019
NCBI chr 1:105,030,035...105,032,866
Ensembl chr 1:95,893,457...95,897,243
G
Mks1
MKS transition zone complex subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4821832 (PMID:27340223)
Ensembl RGD
PMID:27340223
GO_REF:0000107
NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
G
Tbr1
T-box brain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2179766 (PMID:20615956)
RGD
PMID:20615956
NCBI chr 3:66,758,805...66,769,626
Ensembl chr 3:46,351,213...46,361,041
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3797048 (PMID:18692041)
Ensembl RGD
PMID:18692041
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148569 (PMID:19805295)
Ensembl RGD
PMID:19805295
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346867 (PMID:25100655)
Ensembl RGD
PMID:25100655
GO_REF:0000107
NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346866 (PMID:25100655)
Ensembl RGD
PMID:25100655
GO_REF:0000107
NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:8,580,905...8,610,243
G
Mapk1
mitogen activated protein kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346859 (PMID:25100655)
Ensembl RGD
PMID:25100655
GO_REF:0000107
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:25100655)
RGD
PMID:25100655
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2384513 (PMID:18990706)
Ensembl RGD
PMID:18990706
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
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