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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of skeletal muscle tissue development
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Accession:GO:0048641 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.


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regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,748,761...64,892,153
JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in ISO (PMID:22101682) UniProt PMID:22101682 NCBI chr 2:130,226,222...130,403,960 JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,694...123,546,417
JBrowse link
G WNT10B Wnt family member 10B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3581945|PMID:15673614) Ensembl
MGI
PMID:15673614 GO_REF:0000107 MGI:3581945 NCBI chr 5:14,997,377...15,013,928
Ensembl chr 5:14,997,381...15,013,919
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRAS NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 4:105,845,913...105,853,769
Ensembl chr 4:105,845,872...105,858,227
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
G TSC22D3 TSC22 domain family member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chr  X:88,171,325...88,233,583
Ensembl chr  X:88,171,329...88,233,964
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 9:88,286,911...88,290,131 JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,726,668...31,738,135
Ensembl chr13:31,726,731...31,738,770
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
G YBX3 Y-box binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3808638|PMID:18676817) Ensembl
MGI
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr 5:61,337,868...61,361,269
Ensembl chr 5:61,337,863...61,361,280
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,858,845...5,874,124
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chr13:50,541,407...50,554,346 JBrowse link
G MYF5 myogenic factor 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:100,753,440...100,755,558
Ensembl chr 5:100,752,890...100,755,494
JBrowse link
G MYF6 myogenic factor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:100,762,918...100,764,771
Ensembl chr 5:100,762,910...100,765,704
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:41,422,522...41,424,236
Ensembl chr 2:41,415,735...41,425,234
JBrowse link
G MYOG myogenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:113,783,233...113,785,312
Ensembl chr 9:113,782,469...113,785,362
JBrowse link
G SHOX2 short stature homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,890,447
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3522534|PMID:15572127) Ensembl
MGI
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 9:53,079,543...53,178,881
Ensembl chr 9:53,079,550...53,178,881
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,160...23,265,106
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,225...84,402,956
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,122,407...96,296,842
JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5569711|PMID:23926128) Ensembl
MGI
PMID:23926128 GO_REF:0000107 MGI:5569711 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929969|PMID:11171399) Ensembl
MGI
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,154,086...51,202,176
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,858,845...5,874,124
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,032,782...150,035,591
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,231...211,344
JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chr 2:1,469,183...1,496,417 JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:122,286,904...122,379,302
Ensembl chr  X:122,286,916...122,379,299
JBrowse link
G NACA nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr 5:22,044,569...22,058,096 JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chr12:36,111,584...36,159,287
Ensembl chr12:36,111,653...36,160,376
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16567
    regulation of biological process 11452
      regulation of developmental process 2541
        regulation of muscle organ development 54
          regulation of striated muscle tissue development 50
            regulation of skeletal muscle tissue development 34
              negative regulation of skeletal muscle tissue development + 7
              positive regulation of skeletal muscle tissue development + 24
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 16567
    developmental process 6314
      anatomical structure development 5831
        multicellular organism development 5303
          system development 4994
            animal organ development 3835
              muscle organ development 334
                regulation of muscle organ development 54
                  regulation of striated muscle tissue development 50
                    regulation of skeletal muscle tissue development 34
                      negative regulation of skeletal muscle tissue development + 7
                      positive regulation of skeletal muscle tissue development + 24
                      regulation of branchiomeric skeletal muscle development + 0
                      regulation of extraocular skeletal muscle development + 0
paths to the root