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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of skeletal muscle tissue development
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Accession:GO:0048641 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.


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regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 2:58,446,438...58,566,828
Ensembl chr 2:58,388,644...58,567,157
JBrowse link
G Megf10 multiple EGF-like-domains 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:57,133,090...57,297,467
Ensembl chr18:57,133,090...57,297,467
JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chr19:55,741,797...55,933,659
Ensembl chr19:55,741,820...55,933,654
JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IMP (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chr15:98,770,712...98,778,206
Ensembl chr15:98,770,712...98,778,150
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras neuroblastoma ras oncogene acts_upstream_of_or_within IDA
IGI
(MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 3:103,058,285...103,067,914
Ensembl chr 3:103,058,285...103,067,914
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:25,687,002...25,705,077
Ensembl chr 7:25,687,002...25,705,077
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 acts_upstream_of_or_within IDA (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chr  X:140,539,528...140,600,522
Ensembl chr  X:140,539,528...140,600,659
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IDA (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IMP (MGI:5315325|PMID:21971047) UniProt PMID:21971047 MGI:5315325 NCBI chr 9:108,490,607...108,502,337
Ensembl chr 9:108,490,602...108,502,337
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:44,067,021...44,095,627
Ensembl chr 9:44,067,021...44,095,627
JBrowse link
G Ybx3 Y box protein 3 acts_upstream_of_or_within IDA (MGI:3808638|PMID:18676817) MGI PMID:18676817 MGI:3808638 NCBI chr 6:131,364,858...131,388,450
Ensembl chr 6:131,364,855...131,388,476
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chr19:4,861,216...4,877,909
Ensembl chr19:4,861,216...4,877,909
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chr 1:106,538,176...106,714,290
Ensembl chr 1:106,538,178...106,714,274
JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:97,238,530...97,253,217
Ensembl chr 6:97,238,534...97,252,759
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:107,482,908...107,486,927
Ensembl chr10:107,482,908...107,486,134
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:107,492,848...107,494,723
Ensembl chr10:107,492,853...107,494,737
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:46,376,474...46,379,092
Ensembl chr 7:46,376,474...46,379,099
JBrowse link
G Myog myogenin involved_in IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:62381|PMID:8393145)
GO_Central
UniProt
PMID:8393145 PMID:21873635 MGI:6201960 MGI:62381 NCBI chr 1:134,290,004...134,292,548
Ensembl chr 1:134,289,989...134,292,548
JBrowse link
G Shox2 short stature homeobox 2 involved_in IMP (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chr 3:66,971,723...66,981,771
Ensembl chr 3:66,971,727...66,981,771
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chr 9:35,421,528...35,507,652
Ensembl chr 9:35,421,128...35,507,652
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in IMP (MGI:5619733|PMID:23460868) CACAO PMID:23460868 MGI:5619733 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Flot1 flotillin 1 involved_in ISO
IMP
(MGI:5634880|PMID:24046456) MGI
UniProt
PMID:24046456 GO_REF:0000096 MGI:4834177 MGI:5634880 NCBI chr17:35,823,320...35,832,789
Ensembl chr17:35,823,230...35,832,791
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase involved_in ISO RGD
MGI
PMID:19388010 GO_REF:0000096 MGI:4417868 RGD:2317940 NCBI chr13:96,648,962...96,670,936
Ensembl chr13:96,648,967...96,670,936
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:83,504,017...83,667,079
Ensembl chr13:83,504,034...83,667,080
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within IGI
IMP
(MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 1:162,223,368...162,223,477
Ensembl chr 1:162,223,368...162,223,477
JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit acts_upstream_of_or_within IMP (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chr15:5,143,861...5,181,899
Ensembl chr15:5,143,861...5,181,899
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1929969|PMID:11171399) MGI PMID:11171399 MGI:1929969 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:44,067,021...44,095,627
Ensembl chr 9:44,067,021...44,095,627
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IMP (MGI:2179189|PMID:11856745) CACAO PMID:11856745 MGI:2179189 NCBI chr11:59,248,036...59,290,751
Ensembl chr11:59,248,033...59,290,752
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr19:4,861,216...4,877,909
Ensembl chr19:4,861,216...4,877,909
JBrowse link
G Adrb2 adrenergic receptor, beta 2 involved_in ISO RGD
MGI
PMID:16177600 GO_REF:0000096 MGI:4417868 RGD:1598747 NCBI chr18:62,177,713...62,179,981
Ensembl chr18:62,177,816...62,179,959
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:5608606|PMID:25220152) UniProt PMID:25220152 MGI:5608606 NCBI chr17:15,367,354...15,376,932
Ensembl chr17:15,367,354...15,376,872
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IMP (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chr 7:142,650,768...142,666,816
Ensembl chr 7:142,650,766...142,666,816
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 acts_upstream_of_or_within IMP (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:71,210,767...71,315,413
Ensembl chr  X:71,210,767...71,315,691
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide involved_in IMP (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr10:128,035,346...128,048,637
Ensembl chr10:128,035,575...128,048,637
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 involved_in ISO RGD
MGI
PMID:16408196 GO_REF:0000096 MGI:4417868 RGD:1643018 NCBI chr11:86,498,869...86,544,885
Ensembl chr11:86,498,871...86,544,805
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28607
    regulation of biological process 12586
      regulation of developmental process 2711
        regulation of muscle organ development 58
          regulation of striated muscle tissue development 54
            regulation of skeletal muscle tissue development 34
              negative regulation of skeletal muscle tissue development + 7
              positive regulation of skeletal muscle tissue development + 24
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 28607
    developmental process 7020
      anatomical structure development 6409
        multicellular organism development 5785
          system development 5444
            animal organ development 4186
              muscle organ development 384
                regulation of muscle organ development 58
                  regulation of striated muscle tissue development 54
                    regulation of skeletal muscle tissue development 34
                      negative regulation of skeletal muscle tissue development + 7
                      positive regulation of skeletal muscle tissue development + 24
                      regulation of branchiomeric skeletal muscle development + 0
                      regulation of extraocular skeletal muscle development + 0
paths to the root