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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of skeletal muscle tissue development
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Accession:GO:0048641 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.


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regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Megf10 multiple EGF-like-domains 10 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr18:57,266,162...57,430,539
Ensembl chr18:57,266,162...57,430,539 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (PMID:21177349) MGI PMID:21177349 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IMP (PMID:15673614) MGI PMID:15673614 NCBI chr15:98,668,593...98,676,093
Ensembl chr15:98,668,593...98,676,031 		JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras neuroblastoma ras oncogene acts_upstream_of_or_within IDA
IGI		 (PMID:20534588) MGI PMID:20534588 NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IDA (PMID:7664846), (PMID:7958419) MGI PMID:7664846 PMID:7958419 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IMP (PMID:21971047) UniProt PMID:21971047 NCBI chr 9:108,367,806...108,379,536
Ensembl chr 9:108,367,801...108,379,536 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 9:43,978,318...44,006,924
Ensembl chr 9:43,978,318...44,006,924 		JBrowse link
G Ybx3 Y box protein 3 acts_upstream_of_or_within IDA (PMID:18676817) MGI PMID:18676817 NCBI chr 6:131,341,821...131,365,413
Ensembl chr 6:131,341,818...131,365,439 		JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (PMID:18178581) UniProt PMID:18178581 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:11146504) MGI PMID:11146504 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:97,215,491...97,230,137
Ensembl chr 6:97,215,495...97,229,720 		JBrowse link
G Myf5 myogenic factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Myf6 myogenic factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:107,328,709...107,330,584
Ensembl chr10:107,328,714...107,330,598 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523 		JBrowse link
G Myog myogenin involved_in IBA
IMP		 (PMID:8393145) GO_Central
UniProt		 PMID:8393145 GO_REF:0000033 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in IMP (PMID:21156168) BHF-UCL PMID:21156168 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (PMID:15572127) MGI PMID:15572127 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (PMID:23460868) CACAO PMID:23460868 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Flot1 flotillin 1 involved_in ISO
IMP		 (PMID:24046456) GO_Central
UniProt		 PMID:24046456 GO_REF:0000119 NCBI chr17:36,134,243...36,143,674
Ensembl chr17:36,134,122...36,143,683 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase involved_in ISO RGD
GO_Central		 PMID:19388010 GO_REF:0000096 RGD:2317940 NCBI chr13:96,785,470...96,807,444
Ensembl chr13:96,785,475...96,807,444 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within IGI
IMP		 (PMID:20534588) MGI PMID:20534588 NCBI chr 1:162,050,937...162,051,046
Ensembl chr 1:162,050,937...162,051,046 		JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit acts_upstream_of_or_within IMP (PMID:23926128) MGI PMID:23926128 NCBI chr15:5,172,641...5,211,380
Ensembl chr15:5,173,343...5,211,380 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:11171399) MGI PMID:11171399 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 9:43,978,318...44,006,924
Ensembl chr 9:43,978,318...44,006,924 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IMP (PMID:11856745) CACAO PMID:11856745 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (PMID:18178581), (PMID:24234654) UniProt PMID:18178581 PMID:24234654 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937 		JBrowse link
G Adrb2 adrenergic receptor, beta 2 involved_in ISO RGD
GO_Central		 PMID:16177600 GO_REF:0000096 RGD:1598747 NCBI chr18:62,310,784...62,313,052
Ensembl chr18:62,310,887...62,313,030 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (PMID:25220152) UniProt PMID:25220152 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IMP (PMID:29440408) UniProt PMID:29440408 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 acts_upstream_of_or_within IMP (PMID:23695157) MGI PMID:23695157 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:16408196 GO_REF:0000096 GO_REF:0000107 RGD:1643018 NCBI chr11:86,389,695...86,435,711
Ensembl chr11:86,389,697...86,435,631 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28628
    developmental process 7535
      regulation of developmental process 2917
        regulation of muscle organ development 57
          regulation of striated muscle tissue development 53
            regulation of skeletal muscle tissue development 32
              negative regulation of skeletal muscle tissue development + 6
              positive regulation of skeletal muscle tissue development + 23
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 28628
    developmental process 7535
      anatomical structure development 7000
        animal organ development 3846
          muscle organ development 419
            regulation of muscle organ development 57
              regulation of striated muscle tissue development 53
                regulation of skeletal muscle tissue development 32
                  negative regulation of skeletal muscle tissue development + 6
                  positive regulation of skeletal muscle tissue development + 23
                  regulation of branchiomeric skeletal muscle development + 0
                  regulation of extraocular skeletal muscle development + 0
paths to the root