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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of skeletal muscle tissue development
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Accession:GO:0048641 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.


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regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652 		JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:16,359,648...16,574,882
Ensembl chr11:16,378,669...16,617,335 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:21177349) MGI PMID:21177349 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G WNT10B Wnt family member 10B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673614) Ensembl
MGI		 PMID:15673614 GO_REF:0000107 NCBI chr27:5,599,905...5,605,506
Ensembl chr27:5,601,089...5,605,501 		JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G NRAS NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (PMID:20534588) MGI PMID:20534588 NCBI chr17:52,411,733...52,418,788
Ensembl chr17:52,411,733...52,418,788 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7664846), (PMID:7958419) Ensembl
MGI		 PMID:7664846 PMID:7958419 GO_REF:0000107
G USP19 ubiquitin specific peptidase 19 involved_in ISO (PMID:21971047) UniProt PMID:21971047 NCBI chr20:40,062,802...40,074,221
Ensembl chr20:40,064,599...40,074,082 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291 		JBrowse link
G YBX3 Y-box binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18676817) Ensembl
MGI		 PMID:18676817 GO_REF:0000107 NCBI chr27:35,043,756...35,066,230
Ensembl chr27:35,043,699...35,066,227 		JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,787,353...50,801,036
Ensembl chr18:50,787,353...50,801,197 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11146504) Ensembl
MGI		 PMID:11146504 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G LMOD3 leiomodin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,612,916...22,629,207
Ensembl chr20:22,612,946...22,629,214 		JBrowse link
G MYF5 myogenic factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:23,049,235...23,051,604
Ensembl chr15:23,048,585...23,051,970 		JBrowse link
G MYF6 myogenic factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:23,039,090...23,041,092
Ensembl chr15:23,039,416...23,041,019 		JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712 		JBrowse link
G MYOG myogenin involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:112,116...114,604
Ensembl chr 7:112,034...113,892 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566 		JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15572127) Ensembl
MGI		 PMID:15572127 GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:517,941...528,677
Ensembl chr12:516,032...528,637 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chr 3:30,970,037...30,988,987
Ensembl chr 3:30,970,037...30,990,294 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of_or_within ISO (PMID:20534588) MGI PMID:20534588 NCBI chr 7:26,818,559...26,818,668
Ensembl chr 7:26,818,559...26,818,670 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23926128) Ensembl
MGI		 PMID:23926128 GO_REF:0000107 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11171399) Ensembl
MGI		 PMID:11171399 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,787,353...50,801,036
Ensembl chr18:50,787,353...50,801,197 		JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chr 4:60,048,502...60,050,447
Ensembl chr 4:59,941,517...60,050,298 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:25220152) UniProt PMID:25220152 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (PMID:29440408) UniProt PMID:29440408 NCBI chr18:46,294,036...46,311,982
Ensembl chr18:46,294,019...46,311,982 		JBrowse link
G MTM1 myotubularin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23695157) Ensembl
MGI		 PMID:23695157 GO_REF:0000107 NCBI chr  X:118,820,644...118,917,166
Ensembl chr  X:118,820,494...118,916,368 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chr 9:34,387,084...34,590,603
Ensembl chr 9:34,387,091...34,425,292 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22117
    developmental process 6922
      regulation of developmental process 2726
        regulation of muscle organ development 54
          regulation of striated muscle tissue development 50
            regulation of skeletal muscle tissue development 33
              negative regulation of skeletal muscle tissue development + 7
              positive regulation of skeletal muscle tissue development + 23
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 22117
    developmental process 6922
      anatomical structure development 6481
        animal organ development 3587
          muscle organ development 373
            regulation of muscle organ development 54
              regulation of striated muscle tissue development 50
                regulation of skeletal muscle tissue development 33
                  negative regulation of skeletal muscle tissue development + 7
                  positive regulation of skeletal muscle tissue development + 23
                  regulation of branchiomeric skeletal muscle development + 0
                  regulation of extraocular skeletal muscle development + 0
paths to the root