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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of skeletal muscle tissue development
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Accession:GO:0048641 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.


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regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694
JBrowse link
G Megf10 multiple EGF like domains 10 involved_in ISO (PMID:22101682) UniProt PMID:22101682 NCBI chrNW_004955415:393,642...513,157
Ensembl chrNW_004955415:335,012...513,891
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chrNW_004955435:18,001,517...18,009,105
Ensembl chrNW_004955435:18,001,517...18,009,103
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tsc22d3 TSC22 domain family member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chrNW_004955490:8,177,356...8,238,373
Ensembl chrNW_004955490:8,177,356...8,238,373
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5315325|PMID:21971047) UniProt PMID:21971047 MGI:5315325 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
G Ybx3 Y-box binding protein 3 acts_upstream_of_or_within ISO (MGI:3808638|PMID:18676817) MGI PMID:18676817 MGI:3808638 NCBI chrNW_004955413:7,090,085...7,111,542
Ensembl chrNW_004955413:7,089,719...7,108,473
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chrNW_004955422:18,799,372...18,812,458
Ensembl chrNW_004955422:18,799,372...18,812,711
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chrNW_004955421:18,728,993...18,744,326
Ensembl chrNW_004955421:18,728,692...18,743,974
JBrowse link
G Myog myogenin involved_in ISO (MGI:62381|PMID:8393145) UniProt PMID:8393145 MGI:62381 NCBI chrNW_004955406:39,099,044...39,102,479
Ensembl chrNW_004955406:39,099,716...39,102,501
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chrNW_004955448:8,937,656...8,947,890
Ensembl chrNW_004955448:8,937,610...8,947,890
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chrNW_004955412:27,004,391...27,093,968
Ensembl chrNW_004955412:27,003,919...27,065,989
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (MGI:5619733|PMID:23460868) CACAO PMID:23460868 MGI:5619733 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
UniProt PMID:24046456 MGI:5634880 NCBI chrNW_004955583:717,246...729,924
Ensembl chrNW_004955583:713,560...729,924
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1929969|PMID:11171399) MGI PMID:11171399 MGI:1929969 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) CACAO PMID:11856745 MGI:2179189 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chrNW_004955422:18,799,372...18,812,458
Ensembl chrNW_004955422:18,799,372...18,812,711
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5608606|PMID:25220152) UniProt PMID:25220152 MGI:5608606 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Igf2 insulin like growth factor 2 involved_in ISO (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chrNW_004955422:13,880,525...13,907,963
Ensembl chrNW_004955422:13,880,471...13,888,566
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chrNW_004955458:4,251,679...4,265,430
Ensembl chrNW_004955458:4,248,599...4,265,584
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11940
    regulation of biological process 8283
      regulation of developmental process 2344
        regulation of muscle organ development 49
          regulation of striated muscle tissue development 46
            regulation of skeletal muscle tissue development 30
              negative regulation of skeletal muscle tissue development + 7
              positive regulation of skeletal muscle tissue development + 20
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 11940
    developmental process 5659
      anatomical structure development 5288
        multicellular organism development 4845
          system development 4567
            animal organ development 3522
              muscle organ development 311
                regulation of muscle organ development 49
                  regulation of striated muscle tissue development 46
                    regulation of skeletal muscle tissue development 30
                      negative regulation of skeletal muscle tissue development + 7
                      positive regulation of skeletal muscle tissue development + 20
                      regulation of branchiomeric skeletal muscle development + 0
                      regulation of extraocular skeletal muscle development + 0
paths to the root