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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of skeletal muscle tissue development
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Accession:GO:0048641 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.


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regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr2B:44,994,175...45,133,490
Ensembl chr2B:162,234,823...162,297,805 		JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:122,639,155...122,877,324
Ensembl chr 5:128,466,095...128,641,043 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:21177349) MGI PMID:21177349 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,771,163...39,785,411
Ensembl chr12:40,659,106...40,665,734 		JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRAS NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (PMID:20534588) MGI PMID:20534588 NCBI chr 1:87,837,146...87,850,013
Ensembl chr 1:122,890,505...122,903,585 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:7664846), (PMID:7958419) MGI PMID:7664846 PMID:7958419 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in ISO (PMID:21971047) UniProt PMID:21971047 NCBI chr 3:49,032,373...49,045,238
Ensembl chr 3:50,100,216...50,125,112 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868 		JBrowse link
G YBX3 Y-box binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:10,728,049...10,752,267
Ensembl chr12:10,996,380...11,018,172 		JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429 		JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G LMOD3 leiomodin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:69,042,870...69,058,704
Ensembl chr 3:70,410,288...70,424,702 		JBrowse link
G MYF5 myogenic factor 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:78,236,945...78,239,701
Ensembl chr12:81,347,324...81,350,389 		JBrowse link
G MYF6 myogenic factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:78,226,562...78,229,470
Ensembl chr12:81,338,339...81,340,176 		JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690 		JBrowse link
G MYOG myogenin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:155,138,969...155,149,619
Ensembl chr 3:163,190,284...163,199,239 		JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:120,772,160...120,877,529
Ensembl chr11:124,685,084...124,786,091 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,472,839...30,487,809
Ensembl chr 6:31,342,033...31,357,559 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chr 5:39,936,630...39,961,519
Ensembl chr 5:40,548,919...40,573,785 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429 		JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
G IGF2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890 		JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within ISO (PMID:23695157) MGI PMID:23695157 NCBI chr  X:140,218,742...140,323,495
Ensembl chr  X:150,174,758...150,255,381 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chr17:53,958,807...54,014,752
Ensembl chr17:58,799,069...58,853,653 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    developmental process 6685
      regulation of developmental process 2599
        regulation of muscle organ development 53
          regulation of striated muscle tissue development 48
            regulation of skeletal muscle tissue development 31
              negative regulation of skeletal muscle tissue development + 6
              positive regulation of skeletal muscle tissue development + 22
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 6685
      anatomical structure development 6266
        animal organ development 3500
          muscle organ development 362
            regulation of muscle organ development 53
              regulation of striated muscle tissue development 48
                regulation of skeletal muscle tissue development 31
                  negative regulation of skeletal muscle tissue development + 6
                  positive regulation of skeletal muscle tissue development + 22
                  regulation of branchiomeric skeletal muscle development + 0
                  regulation of extraocular skeletal muscle development + 0
paths to the root