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ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic organ development
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Accession:GO:0048568 term browser browse the term
Definition:Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
Synonyms:exact_synonym: embryonic organogenesis


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embryonic organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid2 AT-rich interaction domain 2 acts_upstream_of_or_within IMP (PMID:25299188) MGI PMID:25299188 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in
acts_upstream_of_or_within		 IMP (MGI:2175930|PMID:11854453)
(PMID:17359964)		 BHF-UCL
MGI		 PMID:11854453 PMID:17359964 MGI:2175930 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (PMID:30478225) MGI PMID:30478225 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 ISO RGD PMID:10419986 RGD:62382 NCBI chr10:127,126,662...127,132,160
Ensembl chr10:127,126,643...127,132,157
Ensembl chr10:127,126,643...127,132,157 		JBrowse link
G Epn1 epsin 1 acts_upstream_of_or_within IGI (PMID:19666558) MGI PMID:19666558 NCBI chr 7:5,083,207...5,101,178
Ensembl chr 7:5,083,234...5,101,177 		JBrowse link
G Epn2 epsin 2 acts_upstream_of_or_within IGI (PMID:19666558) MGI PMID:19666558 NCBI chr11:61,406,709...61,470,560
Ensembl chr11:61,408,075...61,470,513 		JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 ISO RGD PMID:11425516 RGD:2313673 NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 ISO RGD PMID:11425516 RGD:2313673 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Ercc3 excision repair cross-complementing rodent repair deficiency, complementation group 3 involved_in ISO
IBA		 RGD
GO_Central		 PMID:11425516 GO_REF:0000033 RGD:2313673 NCBI chr18:32,373,357...32,403,206
Ensembl chr18:32,373,353...32,403,204 		JBrowse link
G Fendrr Foxf1 adjacent non-coding developmental regulatory RNA acts_upstream_of_or_within IMP (PMID:24381249) MGI PMID:24381249 NCBI chr 8:121,781,621...121,809,849
Ensembl chr 8:121,781,621...121,809,849 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:9435295) MGI PMID:9435295 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:11135239) MGI
GO_Central		 PMID:11135239 GO_REF:0000033 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in IMP (MGI:5440338|PMID:22998873) ARUK-UCL PMID:22998873 MGI:5440338 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:21377456) MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:16364283) MGI PMID:16364283 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Hoxb7 homeobox B7 involved_in ISO (PMID:2885844) UniProt PMID:2885844 NCBI chr11:96,176,431...96,180,989
Ensembl chr11:96,177,449...96,180,988 		JBrowse link
G Hoxd4 homeobox D4 involved_in ISO (PMID:2879245) UniProt PMID:2879245 NCBI chr 2:74,552,322...74,559,504
Ensembl chr 2:74,542,273...74,559,504 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in IMP (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chr 1:169,777,109...169,796,757
Ensembl chr 1:169,777,104...169,796,810 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A acts_upstream_of_or_within IMP (PMID:23028370) MGI PMID:23028370 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO RGD PMID:12672019 RGD:9587841 NCBI chr18:70,701,298...70,761,769
Ensembl chr18:70,701,260...70,759,202 		JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 ISO RGD PMID:12672019 RGD:9587841 NCBI chr10:80,228,373...80,235,365
Ensembl chr10:80,228,373...80,235,384 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within IMP (PMID:20589884) MGI PMID:20589884 NCBI chr  X:100,317,697...100,342,540
Ensembl chr  X:100,317,636...100,341,071 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within IMP (PMID:17183527) MGI PMID:17183527 NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within IMP (PMID:23657012) MGI PMID:23657012 NCBI chr 7:121,706,485...121,732,203
Ensembl chr 7:121,706,485...121,732,208 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15581866) GO_Central
MGI		 PMID:15581866 GO_REF:0000033 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374 		JBrowse link
G Pbx3 pre B cell leukemia homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:34,061,469...34,264,168
Ensembl chr 2:34,061,469...34,263,154 		JBrowse link
G Pbx4 pre B cell leukemia homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,285,127...70,324,942
Ensembl chr 8:70,285,141...70,324,942 		JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in IEP (MGI:1338343|PMID:10375497) UniProt PMID:10375497 MGI:1338343 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133 		JBrowse link
G Pole polymerase (DNA directed), epsilon ISO RGD PMID:11425516 RGD:2313673 NCBI chr 5:110,434,185...110,485,319
Ensembl chr 5:110,434,172...110,485,340 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IGI (PMID:24302887) MGI PMID:24302887 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein ISO RGD PMID:11425516 RGD:2313673 NCBI chr 4:55,350,042...55,392,237
Ensembl chr 4:55,350,043...55,392,237 		JBrowse link
G Rbbp6 retinoblastoma binding protein 6, ubiquitin ligase acts_upstream_of_or_within IGI (PMID:17470788) MGI PMID:17470788 NCBI chr 7:122,568,980...122,601,780
Ensembl chr 7:122,564,909...122,601,780 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Setd2 SET domain containing 2 acts_upstream_of_or_within IMP (PMID:20133625) MGI PMID:20133625 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:15680353) MGI PMID:15680353 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IGI (PMID:24302887) MGI PMID:24302887 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 acts_upstream_of_or_within IMP (PMID:19913509) MGI PMID:19913509 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:17522155) MGI PMID:17522155 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Sp2 Sp2 transcription factor acts_upstream_of_or_within IMP (PMID:20221402) MGI PMID:20221402 NCBI chr11:96,844,158...96,873,785
Ensembl chr11:96,844,167...96,873,785 		JBrowse link
G Syf2 SYF2 homolog, RNA splicing factor (S. cerevisiae) acts_upstream_of_or_within IMP (PMID:22448250) MGI PMID:22448250 NCBI chr 4:134,658,291...134,664,848
Ensembl chr 4:134,658,209...134,664,859 		JBrowse link
G Tead1 TEA domain family member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014 		JBrowse link
G Tead2 TEA domain family member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068 		JBrowse link
G Tead3 TEA domain family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:28,550,645...28,569,779
Ensembl chr17:28,550,645...28,569,791 		JBrowse link
G Tead4 TEA domain family member 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:128,204,106...128,277,776
Ensembl chr 6:128,201,251...128,277,786 		JBrowse link
G Thra thyroid hormone receptor alpha ISO RGD PMID:17496154 RGD:2314319 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Thrb thyroid hormone receptor beta ISO RGD PMID:17496154 RGD:2314319 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
G Tnrc6c trinucleotide repeat containing 6C acts_upstream_of_or_within IMP (PMID:22187428) MGI PMID:22187428 NCBI chr11:117,544,529...117,654,265
Ensembl chr11:117,545,115...117,654,265 		JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IGI (PMID:17470788) MGI PMID:17470788 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Utp25 UTP25 small subunit processome component involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:192,786,707...192,812,603
Ensembl chr 1:192,773,412...192,812,580 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within IMP (PMID:23028370) MGI PMID:23028370 NCBI chr  Y:1,085,187...1,245,787
Ensembl chr  Y:1,096,861...1,245,759 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within IGI (PMID:24302887) MGI PMID:24302887 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within IMP (PMID:24001775) MGI PMID:24001775 NCBI chr 9:119,723,961...119,755,652
Ensembl chr 9:119,723,944...119,755,653 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:18367557) MGI PMID:18367557 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within IMP (PMID:15226444) MGI PMID:15226444 NCBI chr12:80,154,534...80,159,787
Ensembl chr12:80,154,528...80,159,787 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 acts_upstream_of_or_within IMP
ISO		 (PMID:16103912) MGI PMID:16103912 NCBI chr15:40,518,438...40,967,988
Ensembl chr15:40,518,431...40,967,988 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within IMP (PMID:19363478) MGI PMID:19363478 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:20016102) MGI PMID:20016102 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within IMP (PMID:19936227) MGI PMID:19936227 NCBI chr14:110,984,770...110,992,640
Ensembl chr14:110,986,012...110,992,581 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within IMP (PMID:24302887) MGI PMID:24302887 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in IMP (MGI:6885507|PMID:35175278) UniProt PMID:35175278 MGI:6885507 NCBI chr10:81,464,352...81,483,446
Ensembl chr10:81,464,374...81,483,444 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:11875276) MGI PMID:11875276 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Cdh23 cadherin related 23 (otocadherin) acts_upstream_of_or_within IMP
IGI		 (PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:12121736)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:11322776)
(PMID:15537665)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269 		JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within IMP (PMID:17021174) MGI PMID:17021174 NCBI chr17:44,445,671...44,591,059
Ensembl chr17:44,445,659...44,591,059 		JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within IMP (PMID:19414487), (PMID:19423712) MGI PMID:19414487 PMID:19423712 NCBI chr 3:58,751,449...58,792,633
Ensembl chr 3:58,751,449...58,792,761 		JBrowse link
G Clrn2 clarin 2 involved_in IMP (MGI:6810803|PMID:33496845) UniProt PMID:33496845 MGI:6810803 NCBI chr 5:45,611,021...45,621,824
Ensembl chr 5:45,611,093...45,621,491 		JBrowse link
G Grxcr2 glutaredoxin, cysteine rich 2 acts_upstream_of_or_within IMP
IGI		 (PMID:30380417) MGI PMID:30380417 NCBI chr18:42,118,388...42,132,114
Ensembl chr18:42,118,388...42,132,114 		JBrowse link
G Lhfpl5 lipoma HMGIC fusion partner-like 5 acts_upstream_of_or_within IMP (PMID:15905332)
(PMID:17876667), (PMID:23217710)		 MGI PMID:15905332 PMID:17876667 PMID:23217710 NCBI chr17:28,794,330...28,802,567
Ensembl chr17:28,794,615...28,804,653 		JBrowse link
G Myo3a myosin IIIA involved_in IGI
IMP		 (PMID:26754646) MGI PMID:26754646 NCBI chr 2:22,232,360...22,508,693
Ensembl chr 2:22,232,314...22,508,264 		JBrowse link
G Myo3b myosin IIIB involved_in IGI
IMP		 (PMID:26754646) MGI PMID:26754646 NCBI chr 2:69,869,464...70,259,542
Ensembl chr 2:69,869,470...70,259,542 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within IMP (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 MGI PMID:11753415 PMID:12121736 PMID:17050716 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within IMP (PMID:24920589) MGI PMID:24920589 NCBI chr11:115,054,138...115,072,009
Ensembl chr11:115,054,167...115,072,007 		JBrowse link
G Pcdh15 protocadherin 15 acts_upstream_of_or_within IGI
IMP		 (PMID:15537665)
(PMID:10978835)
(PMID:23217710)
(PMID:11124469)
(PMID:16887306)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569 		JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:24334608) GO_Central
MGI		 PMID:24334608 GO_REF:0000033 NCBI chr19:45,015,346...45,048,273
Ensembl chr19:45,015,345...45,034,156 		JBrowse link
G Pls1 plastin 1 (I-isoform) involved_in IMP (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chr 9:95,634,695...95,727,359
Ensembl chr 9:95,634,695...95,727,364 		JBrowse link
G Rest RE1-silencing transcription factor involved_in IMP (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IMP (MGI:5789047|PMID:27269051) UniProt PMID:27269051 MGI:5789047 NCBI chr13:24,685,513...24,917,789
Ensembl chr13:24,685,508...24,917,799 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Sod1 superoxide dismutase 1, soluble acts_upstream_of_or_within IMP (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Strc stereocilin involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:5430850|PMID:21165971)
(PMID:30801007)
(PMID:18849963)		 UniProt
MGI		 PMID:18849963 PMID:21165971 PMID:30801007 MGI:5430850 NCBI chr 2:121,193,729...121,211,851
Ensembl chr 2:121,194,209...121,217,649 		JBrowse link
G Tecta tectorin alpha acts_upstream_of_or_within IGI (PMID:30801007) MGI PMID:30801007 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:30380417) GO_Central
MGI		 PMID:30380417 GO_REF:0000033 NCBI chr 2:25,152,610...25,159,898
Ensembl chr 2:25,152,630...25,159,897 		JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within IMP (PMID:20510926) MGI PMID:20510926 NCBI chr15:78,831,924...78,890,069
Ensembl chr15:78,831,924...78,890,069 		JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:27117407) GO_Central
MGI		 PMID:27117407 GO_REF:0000033 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228 		JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within IMP (PMID:16981008) MGI PMID:16981008 NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:9435295) MGI PMID:9435295 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within IMP (PMID:23610556) MGI PMID:23610556 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
G Gcm1 glial cells missing homolog 1 acts_upstream_of_or_within IMP (PMID:10888880) MGI PMID:10888880 NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906 		JBrowse link
G Grb2 growth factor receptor bound protein 2 acts_upstream_of_or_within IMP (PMID:11369229) MGI PMID:11369229 NCBI chr11:115,534,871...115,599,423
Ensembl chr11:115,534,871...115,599,423 		JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within IMP (PMID:12842419) MGI PMID:12842419 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Llgl2 LLGL2 scribble cell polarity complex component acts_upstream_of_or_within IMP (PMID:21606200) MGI PMID:21606200 NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606 		JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within IMP (PMID:16963017) MGI PMID:16963017 NCBI chr10:29,329,102...29,411,863
Ensembl chr10:29,328,412...29,411,863 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 acts_upstream_of_or_within IMP (PMID:11481489) MGI PMID:11481489 NCBI chr11:117,856,905...117,860,192
Ensembl chr11:117,856,905...117,860,873 		JBrowse link
G Spint1 serine protease inhibitor, Kunitz type 1 acts_upstream_of_or_within IMP (PMID:17174946) MGI PMID:17174946 NCBI chr 2:119,067,841...119,079,995
Ensembl chr 2:119,067,843...119,080,008 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within IMP (PMID:30236446) MGI PMID:30236446 NCBI chr 5:124,678,835...124,688,566
Ensembl chr 5:124,678,758...124,688,569 		JBrowse link
cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in IMP (MGI:1354065|PMID:10716450) UniProt PMID:10716450 MGI:1354065 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Gcm1 glial cells missing homolog 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:10888880) MGI
GO_Central		 PMID:10888880 GO_REF:0000033 NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906 		JBrowse link
G Krt19 keratin 19 acts_upstream_of_or_within IGI (PMID:11062258) MGI PMID:11062258 NCBI chr11:100,031,636...100,036,752
Ensembl chr11:100,031,636...100,039,491 		JBrowse link
G Krt8 keratin 8 acts_upstream_of_or_within IGI (PMID:11062258) MGI PMID:11062258 NCBI chr15:101,905,146...101,912,777
Ensembl chr15:101,905,133...101,912,917 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444 		JBrowse link
cell proliferation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tex19.1 testis expressed gene 19.1 acts_upstream_of_or_within IMP (PMID:23364048) MGI PMID:23364048 NCBI chr11:121,036,969...121,039,140
Ensembl chr11:121,036,969...121,039,145 		JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IMP (PMID:12446788) MGI PMID:12446788 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within IMP (PMID:10021343) MGI PMID:10021343 NCBI chr 5:29,940,896...29,991,476
Ensembl chr 5:29,940,686...30,023,132 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within IMP (PMID:17502352) MGI PMID:17502352 NCBI chr 7:24,941,985...24,950,522
Ensembl chr 7:24,941,986...24,950,186 		JBrowse link
G Itga4 integrin alpha 4 acts_upstream_of_or_within IMP (PMID:7539359) MGI PMID:7539359 NCBI chr 2:79,084,767...79,163,458
Ensembl chr 2:79,085,770...79,163,467 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (PMID:10090727) MGI PMID:10090727 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:7530222)
(PMID:7539357)		 MGI PMID:7530222 PMID:7539357 NCBI chr 3:115,903,669...115,923,337
Ensembl chr 3:115,903,598...115,923,337 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:11543617) MGI PMID:11543617 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within IMP (PMID:15226444) MGI PMID:15226444 NCBI chr12:80,154,534...80,159,787
Ensembl chr12:80,154,528...80,159,787 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in IMP (MGI:3719969|PMID:17609112) UniProt PMID:17609112 MGI:3719969 NCBI chr 4:132,083,233...132,149,765
Ensembl chr 4:132,083,234...132,149,800 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within IGI (PMID:18606138) MGI PMID:18606138 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within IGI (PMID:16116426) MGI PMID:16116426 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within IGI (PMID:19008950)
(PMID:16116426)		 MGI PMID:16116426 PMID:19008950 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within IGI (PMID:19008950) MGI PMID:19008950 NCBI chr16:20,335,694...20,352,763
Ensembl chr16:20,335,732...20,352,760 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10072433) MGI PMID:10072433 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within IGI (PMID:17433286) MGI PMID:17433286 NCBI chr 2:80,242,314...80,277,740
Ensembl chr 2:80,242,314...80,277,969 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:17395647) MGI PMID:17395647 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within IGI (PMID:20643356) MGI PMID:20643356 NCBI chr 4:135,269,199...135,300,943
Ensembl chr 4:135,269,199...135,300,941 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hpn hepsin involved_in IMP (MGI:5306554|PMID:20683358) UniProt PMID:20683358 MGI:5306554 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
G Myo3a myosin IIIA involved_in IMP (MGI:5766107|PMID:26754646) UniProt PMID:26754646 MGI:5766107 NCBI chr 2:22,232,360...22,508,693
Ensembl chr 2:22,232,314...22,508,264 		JBrowse link
G Myo3b myosin IIIB involved_in IMP (MGI:5766107|PMID:26754646) UniProt PMID:26754646 MGI:5766107 NCBI chr 2:69,869,464...70,259,542
Ensembl chr 2:69,869,470...70,259,542 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 IGI
IMP		 (MGI:4822275|PMID:20727173)
(PMID:16916509)
(MGI:84247|PMID:8951055)		 UniProt
MGI
DFLAT		 PMID:8951055 PMID:16916509 PMID:20727173 MGI:4822275 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 involved_in IGI (MGI:5284768|PMID:18231833) UniProt PMID:18231833 MGI:5284768 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813 		JBrowse link
G Ptk7 PTK7 protein tyrosine kinase 7 acts_upstream_of_or_within IMP (PMID:20704721) MGI PMID:20704721 NCBI chr17:46,875,377...46,940,975
Ensembl chr17:46,875,397...46,940,430 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:20016102) MGI PMID:20016102 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12874121) MGI PMID:12874121 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:20346939) MGI PMID:20346939 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tbx1 T-box 1 involved_in
acts_upstream_of_or_within		 IGI
IMP		 (MGI:5284768|PMID:18231833)
(PMID:17825816)		 UniProt
MGI		 PMID:17825816 PMID:18231833 MGI:5284768 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx18 T-box18 acts_upstream_of_or_within IMP (PMID:18353863) MGI PMID:18353863 NCBI chr 9:87,584,853...87,613,313
Ensembl chr 9:87,584,853...87,613,313 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,318,917...56,326,816
Ensembl chr13:56,321,517...56,326,698 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within IMP (PMID:10575115) MGI PMID:10575115 NCBI chr12:91,367,767...91,507,283
Ensembl chr12:91,351,337...91,516,582 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IGI
IMP		 (PMID:20940229)
(PMID:17433286)
(PMID:20643356)
(PMID:16116426), (PMID:18606138)
(PMID:19008950)		 MGI PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 More... NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP
IGI		 (PMID:17433286) MGI PMID:17433286 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:21980308) MGI PMID:21980308 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:10932191) MGI PMID:10932191 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Gjb6 gap junction protein, beta 6 acts_upstream_of_or_within IMP (PMID:12490528) MGI PMID:12490528 NCBI chr14:57,360,760...57,370,764
Ensembl chr14:57,360,760...57,371,068 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:15190012) MGI PMID:15190012 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (PMID:22228095) MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
embryonic brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO RGD PMID:19819228 RGD:11537397 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within IMP (PMID:24947469) MGI PMID:24947469 NCBI chr 5:43,819,715...43,898,317
Ensembl chr 5:43,819,688...43,898,314 		JBrowse link
G Cdc40 cell division cycle 40 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:40,707,617...40,759,139
Ensembl chr10:40,707,617...40,759,307 		JBrowse link
G Cdk20 cyclin dependent kinase 20 acts_upstream_of_or_within IMP (PMID:28817564) MGI PMID:28817564 NCBI chr13:64,580,133...64,587,536
Ensembl chr13:64,580,128...64,589,587 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:32879327) MGI PMID:32879327 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (MGI:1931800|PMID:11262227) ParkinsonsUK-UCL PMID:11262227 MGI:1931800 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G En1 engrailed 1 involved_in IMP (MGI:75252|PMID:7624797) ParkinsonsUK-UCL PMID:7624797 MGI:75252 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G En2 engrailed 2 involved_in IGI (MGI:75252|PMID:7624797) ParkinsonsUK-UCL PMID:7624797 MGI:75252 NCBI chr 5:28,370,694...28,377,195
Ensembl chr 5:28,370,692...28,377,164 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within IMP (PMID:20589884) MGI PMID:20589884 NCBI chr  X:100,317,697...100,342,540
Ensembl chr  X:100,317,636...100,341,071 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within IMP (PMID:32203821) MGI PMID:32203821 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid NOT|involved_in IMP (MGI:6196220|PMID:30074985) ARUK-UCL PMID:30074985 MGI:6196220 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981 		JBrowse link
G Mir34b microRNA 34b acts_upstream_of_or_within IGI (PMID:24982181) MGI PMID:24982181 NCBI chr 9:51,014,862...51,014,945
Ensembl chr 9:51,014,862...51,014,945 		JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within IGI (PMID:24982181) MGI PMID:24982181 NCBI chr 9:51,014,334...51,014,410
Ensembl chr 9:51,014,334...51,014,410 		JBrowse link
G Mir449a microRNA 449a acts_upstream_of_or_within IGI (PMID:24982181) MGI PMID:24982181 NCBI chr13:113,174,068...113,174,158
Ensembl chr13:113,174,068...113,174,158 		JBrowse link
G Mir449b microRNA 449b acts_upstream_of_or_within IGI (PMID:24982181) MGI PMID:24982181 NCBI chr13:113,173,953...113,174,032
Ensembl chr13:113,173,953...113,174,032 		JBrowse link
G Mir449c microRNA 449c acts_upstream_of_or_within IGI (PMID:24982181) MGI PMID:24982181 NCBI chr13:113,172,517...113,172,625
Ensembl chr13:113,172,517...113,172,625 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (PMID:23454480) MGI PMID:23454480 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:25220058) MGI PMID:25220058 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Phf10 PHD finger protein 10 ISO RGD PMID:24056535 RGD:9588230 NCBI chr17:15,165,269...15,181,550
Ensembl chr17:15,165,271...15,181,535 		JBrowse link
G Ppil1 peptidylprolyl isomerase (cyclophilin)-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,469,809...29,482,945
Ensembl chr17:29,469,777...29,483,160 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:17868671) MGI PMID:17868671 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in IMP (PMID:17868671) MGI PMID:17868671 NCBI chr 6:92,347,876...92,683,233
Ensembl chr 6:92,347,889...92,683,136 		JBrowse link
G Rnf112 ring finger protein 112 involved_in IMP (MGI:6154439|PMID:26951452) UniProt PMID:26951452 MGI:6154439 NCBI chr11:61,339,243...61,345,014
Ensembl chr11:61,339,268...61,344,957 		JBrowse link
G Rpl10 ribosomal protein L10 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:73,314,463...73,316,741
Ensembl chr  X:73,314,418...73,316,741 		JBrowse link
G Rpl10-ps3 ribosomal protein L10, pseudogene 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:50,255,526...50,256,284
Ensembl chr 9:50,255,501...50,256,268 		JBrowse link
G Slc6a8 solute carrier family 6 (neurotransmitter transporter, creatine), member 8 ISO RGD PMID:15918910 RGD:1599815 NCBI chr  X:72,716,739...72,726,108
Ensembl chr  X:72,716,756...72,726,108 		JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in IMP
IBA		 (MGI:6094290|PMID:28823707) UniProt
GO_Central		 PMID:28823707 GO_REF:0000033 MGI:6094290 NCBI chr16:56,989,225...57,051,891
Ensembl chr16:56,989,225...57,051,867 		JBrowse link
G Tmem94 transmembrane protein 94 acts_upstream_of_or_within IMP (PMID:30526868) MGI PMID:30526868 NCBI chr11:115,656,245...115,689,859
Ensembl chr11:115,656,259...115,690,192 		JBrowse link
G Tra2b transformer 2 beta acts_upstream_of_or_within IMP (PMID:22194695) MGI PMID:22194695 NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within IMP (PMID:21548880) MGI PMID:21548880 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
G Tubb2b tubulin, beta 2B class IIB acts_upstream_of_or_within IMP (PMID:21515572) MGI PMID:21515572 NCBI chr13:34,310,991...34,314,337
Ensembl chr13:34,310,731...34,314,449 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IDA (MGI:3045659|PMID:15121182) ParkinsonsUK-UCL PMID:15121182 MGI:3045659 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IGI (PMID:17184764) MGI PMID:17184764 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:3042765|PMID:14623956)
(PMID:17184764)		 UniProt
MGI		 PMID:14623956 PMID:17184764 MGI:3042765 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Cdk20 cyclin dependent kinase 20 acts_upstream_of_or_within IMP (PMID:28817564) MGI PMID:28817564 NCBI chr13:64,580,133...64,587,536
Ensembl chr13:64,580,128...64,589,587 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15958512) MGI PMID:15958512 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within IMP (PMID:18791178) MGI PMID:18791178 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:10498698)
(PMID:10572050)		 MGI PMID:10498698 PMID:10572050 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like acts_upstream_of_or_within IMP (PMID:15661756) MGI PMID:15661756 NCBI chr 7:19,093,639...19,112,465
Ensembl chr 7:19,093,674...19,112,458 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within IGI (PMID:7607067) MGI PMID:7607067 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (PMID:7607067) MGI PMID:7607067 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within IMP (PMID:21945076) MGI PMID:21945076 NCBI chr 1:91,422,311...91,457,029
Ensembl chr 1:91,422,369...91,457,029 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674) MGI PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (PMID:22228095) MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 stimulated by retinoic acid gene 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:57,971,076...58,061,287
Ensembl chr 9:57,971,071...58,061,279 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:10049573) MGI PMID:10049573 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IGI (PMID:18653562) MGI PMID:18653562 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within IMP (PMID:18056999) MGI PMID:18056999 NCBI chr17:31,896,905...31,900,704
Ensembl chr17:31,896,781...31,900,707 		JBrowse link
G Foxf2 forkhead box F2 involved_in IMP (MGI:5297296|PMID:22022403) BHF-UCL PMID:22022403 MGI:5297296 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IMP (MGI:3826935|PMID:18832390) CACAO PMID:18832390 MGI:3826935 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within IMP (PMID:28778798) MGI PMID:28778798 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:28778798) MGI PMID:28778798 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:18582859) MGI PMID:18582859 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:19653321)
(PMID:18985738)		 MGI PMID:18985738 PMID:19653321 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IGI (PMID:18653562) MGI PMID:18653562 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Sp1 trans-acting transcription factor 1 acts_upstream_of_or_within IGI (PMID:17584888) MGI PMID:17584888 NCBI chr15:102,314,751...102,344,839
Ensembl chr15:102,314,578...102,344,839 		JBrowse link
G Sp3 trans-acting transcription factor 3 acts_upstream_of_or_within IGI (PMID:17584888) MGI PMID:17584888 NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:9811866) MGI PMID:9811866 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Th tyrosine hydroxylase involved_in IMP (MGI:3617102|PMID:16445854) BHF-UCL PMID:16445854 MGI:3617102 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:18436818) MGI PMID:18436818 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2610005L07Rik RIKEN cDNA 2610005L07 gene acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:9268572) MGI PMID:9268572 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Dlx1as distal-less homeobox 1, antisense acts_upstream_of_or_within IMP (PMID:23415800) MGI PMID:23415800 NCBI chr 2:71,360,982...71,368,235
Ensembl chr 2:71,346,798...71,368,252 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IMP (PMID:7590232) MGI PMID:7590232 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:119,179,189...119,190,869
Ensembl chr11:119,179,189...119,190,915 		JBrowse link
G Eif4a3l1 eukaryotic translation initiation factor 4A3 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:136,304,537...136,306,981
Ensembl chr 6:136,304,537...136,306,981 		JBrowse link
G Eif4a3l2 eukaryotic translation initiation factor 4A3 like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:116,527,132...116,529,563
Ensembl chr 6:116,528,102...116,529,463 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9106663) MGI PMID:9106663 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IGI
IMP		 (PMID:17525797) MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within IMP (PMID:15797856) MGI PMID:15797856 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:21377456) MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Irx5 Iroquois homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:93,084,424...93,088,084
Ensembl chr 8:93,084,253...93,102,914 		JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821 		JBrowse link
G Mmp16 matrix metallopeptidase 16 acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr 4:17,853,072...18,117,479
Ensembl chr 4:17,852,893...18,119,145 		JBrowse link
G Nipbl NIPBL cohesin loading factor acts_upstream_of_or_within IMP (PMID:19763162) MGI PMID:19763162 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11311163) MGI PMID:11311163 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within IMP (PMID:23349049) MGI PMID:23349049 NCBI chr 4:44,524,748...44,710,694
Ensembl chr 4:44,524,757...44,710,487 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in IMP
IBA		 (MGI:894516|PMID:9226440) UniProt
GO_Central		 PMID:9226440 GO_REF:0000033 MGI:894516 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:7758948)
(PMID:9729491)		 MGI PMID:7758948 PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IGI (PMID:15030764) MGI PMID:15030764 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Setd2 SET domain containing 2 acts_upstream_of_or_within IMP (PMID:20133625) MGI PMID:20133625 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:20515681) MGI PMID:20515681 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six2 sine oculis-related homeobox 2 acts_upstream_of_or_within IMP (PMID:20515681) MGI PMID:20515681 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within IGI (PMID:20515681) MGI PMID:20515681 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Slc39a1 solute carrier family 39 (zinc transporter), member 1 acts_upstream_of_or_within IGI
IMP		 (PMID:16652366) MGI PMID:16652366 NCBI chr 3:90,155,512...90,160,923
Ensembl chr 3:90,155,479...90,160,919 		JBrowse link
G Slc39a3 solute carrier family 39 (zinc transporter), member 3 acts_upstream_of_or_within IGI (PMID:16652366) MGI PMID:16652366 NCBI chr10:80,864,374...80,873,169
Ensembl chr10:80,864,372...80,873,260 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:15190012) MGI PMID:15190012 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx15 T-box 15 acts_upstream_of_or_within IMP (PMID:15728667) MGI PMID:15728667 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in
acts_upstream_of_or_within		 IMP (MGI:80519|PMID:8622766)
(PMID:8622765)		 UniProt
MGI		 PMID:8622765 PMID:8622766 MGI:80519 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I acts_upstream_of_or_within IMP (PMID:16806156) MGI PMID:16806156 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in
acts_upstream_of_or_within		 IMP
IGI
ISO		 (MGI:1100098|PMID:8988167)
(PMID:15030764)		 BHF-UCL
MGI		 PMID:8988167 PMID:15030764 GO_REF:0000119 MGI:1100098 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 acts_upstream_of_or_within IGI (PMID:15030764) MGI PMID:15030764 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (PMID:22228095) MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:16998816)
(PMID:16054034)		 MGI PMID:16054034 PMID:16998816 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
embryonic digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within IMP (PMID:7670465) MGI PMID:7670465 NCBI chr 2:163,565,703...163,592,154
Ensembl chr 2:163,568,504...163,592,159 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (PMID:16806149) MGI PMID:16806149 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Cxcl15 C-X-C motif chemokine ligand 15 involved_in ISO (PMID:20875417) DFLAT PMID:20875417 NCBI chr 5:90,942,393...90,950,926
Ensembl chr 5:90,942,393...90,950,926 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:16308329) MGI PMID:16308329 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within IMP (PMID:16308329) MGI PMID:16308329 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IGI (PMID:16439479) MGI PMID:16439479 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within IGI (PMID:16439479) MGI PMID:16439479 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:10693670) MGI PMID:10693670 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:10693670) MGI PMID:10693670 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Myb myeloblastosis oncogene acts_upstream_of_or_within IMP (PMID:10523863) MGI PMID:10523863 NCBI chr10:21,000,829...21,036,883
Ensembl chr10:21,000,834...21,036,883 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IMP
ISO		 (MGI:3795695|PMID:18519639) BHF-UCL
MGI		 PMID:18519639 GO_REF:0000119 MGI:3795695 MGI:4834177 NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in IMP (MGI:3813934|PMID:19097194) UniProt PMID:19097194 MGI:3813934 NCBI chr17:83,522,708...83,532,496
Ensembl chr17:83,522,721...83,532,499 		JBrowse link
G Rarb retinoic acid receptor, beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rarres2 retinoic acid receptor responder (tazarotene induced) 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:48,546,630...48,549,778
Ensembl chr 6:48,546,630...48,549,723 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sct secretin ISO RGD PMID:1711228 RGD:729899 NCBI chr 7:140,858,243...140,859,082
Ensembl chr 7:140,858,243...140,859,046 		JBrowse link
G Stra6 stimulated by retinoic acid gene 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:57,971,076...58,061,287
Ensembl chr 9:57,971,071...58,061,279 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (PMID:20875417) DFLAT PMID:20875417 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:20875417) DFLAT PMID:20875417 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
embryonic digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15017552)
(PMID:16618415)		 MGI PMID:15017552 PMID:16618415 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16618415), (PMID:21492869)
(PMID:21550054)		 MGI PMID:16618415 PMID:21492869 PMID:21550054 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxf1 forkhead box F1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within IMP (PMID:16127717) MGI PMID:16127717 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:16247775) MGI PMID:16247775 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within IMP (PMID:8557196) MGI PMID:8557196 NCBI chr 1:184,459,340...184,464,690
Ensembl chr 1:184,459,337...184,464,816 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:18635606) MGI PMID:18635606 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IDA (MGI:4399020|PMID:16888283) UniProt PMID:16888283 MGI:4399020 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:10821773) MGI PMID:10821773 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:16423343) MGI PMID:16423343 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in IMP (MGI:1860627|PMID:10903171) UniProt PMID:10903171 MGI:1860627 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:21550054) MGI PMID:21550054 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of_or_within		 TAS
IMP		 (MGI:5306328|PMID:11001584)
(PMID:10821773)		 BHF-UCL
MGI		 PMID:10821773 PMID:11001584 MGI:5306328 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:16141225) MGI PMID:16141225 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Six2 sine oculis-related homeobox 2 involved_in IMP (MGI:4365896|PMID:19660448) UniProt PMID:19660448 MGI:4365896 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISO RGD
MGI		 PMID:11804032 GO_REF:0000096 MGI:4417868 RGD:727206 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Tcf7 transcription factor 7, T cell specific acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
embryonic ectodermal digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps52 VPS52 GARP complex subunit acts_upstream_of_or_within IMP (PMID:23142660) MGI PMID:23142660 NCBI chr17:34,174,753...34,186,012
Ensembl chr17:34,174,786...34,186,009 		JBrowse link
embryonic ectodermal digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 acts_upstream_of_or_within IGI (PMID:16207763), (PMID:16611695) MGI PMID:16207763 PMID:16611695 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IMP
IGI		 (PMID:16611695)
(PMID:16207763)
(PMID:16207763), (PMID:16611695)		 MGI PMID:16207763 PMID:16611695 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Efemp1 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr11:28,803,154...28,876,743
Ensembl chr11:28,803,204...28,876,743 		JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913 		JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Foxl2 forkhead box L2 acts_upstream_of_or_within IMP (PMID:15056605) MGI PMID:15056605 NCBI chr 9:98,837,495...98,840,601
Ensembl chr 9:98,837,341...98,840,596 		JBrowse link
G Mfap2 microfibrillar-associated protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295 		JBrowse link
G Mfap5 microfibrillar associated protein 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:122,490,543...122,506,249
Ensembl chr 6:122,482,804...122,506,249 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IGI (PMID:16207763) MGI PMID:16207763 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (PMID:16207763) MGI PMID:16207763 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Vax2 ventral anterior homeobox 2 acts_upstream_of_or_within IDA
IMP		 (PMID:10595508)
(PMID:11830579)		 MGI PMID:10595508 PMID:11830579 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295 		JBrowse link
embryonic genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:12004962) MGI PMID:12004962 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IMP (PMID:14745966) MGI PMID:14745966 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Tcf7 transcription factor 7, T cell specific acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
embryonic heart tube development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apela apelin receptor early endogenous ligand involved_in IMP (MGI:5909243|PMID:28854362), (MGI:5913613|PMID:28663440) UniProt PMID:28663440 PMID:28854362 MGI:5909243 MGI:5913613 NCBI chr 8:65,481,069...65,489,970
Ensembl chr 8:65,481,069...65,489,988 		JBrowse link
G Cdc42 cell division cycle 42 involved_in IMP (PMID:31219639) MGI PMID:31219639 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Chrd chordin involved_in IMP (PMID:17685487) MGI PMID:17685487 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:18231602) MGI PMID:18231602 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in IMP (PMID:30735130) MGI PMID:30735130 NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540 		JBrowse link
G Edn1 endothelin 1 involved_in IMP (PMID:24875861), (PMID:31219639)
(PMID:30735130)		 MGI PMID:24875861 PMID:30735130 PMID:31219639 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
G Ednra endothelin receptor type A involved_in IMP
IGI		 (PMID:20929948)
(PMID:24875861)
(PMID:30735130)
(PMID:24875861), (PMID:31219639)		 MGI PMID:20929948 PMID:24875861 PMID:30735130 PMID:31219639 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16720879) MGI PMID:16720879 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within IGI (PMID:16678147) MGI PMID:16678147 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IGI (PMID:16678147) MGI PMID:16678147 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within IMP (PMID:9136932)
(PMID:9136933)		 MGI PMID:9136932 PMID:9136933 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (PMID:14732399) MGI PMID:14732399 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:22203979)
(PMID:14732399)		 MGI PMID:14732399 PMID:22203979 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:9500551) MGI PMID:9500551 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:15459110) MGI PMID:15459110 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:14500757) MGI PMID:14500757 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in IMP
IGI		 (PMID:30735130) MGI PMID:30735130 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within IMP (PMID:16831833) MGI PMID:16831833 NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IGI (PMID:15843414) MGI PMID:15843414 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in IEP
ISO		 (MGI:3828420|PMID:9545560) BHF-UCL
MGI		 PMID:9545560 GO_REF:0000119 MGI:3828420 MGI:4834177 NCBI chr14:69,409,251...69,412,989
Ensembl chr14:69,409,251...69,412,967 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11311163) MGI PMID:11311163 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:25220058) MGI PMID:25220058 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Plxna4 plexin A4 involved_in IMP
IGI		 (PMID:30735130) MGI PMID:30735130 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127 		JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 acts_upstream_of_or_within IMP (PMID:21302256) MGI PMID:21302256 NCBI chr17:81,680,534...82,045,816
Ensembl chr17:81,680,534...82,045,806 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 acts_upstream_of_or_within IGI (PMID:17610846) MGI PMID:17610846 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Sox18 SRY (sex determining region Y)-box 18 acts_upstream_of_or_within IGI (PMID:17610846) MGI PMID:17610846 NCBI chr 2:181,311,630...181,313,433
Ensembl chr 2:181,311,629...181,313,433 		JBrowse link
G Tbx20 T-box 20 acts_upstream_of_or_within IMP
IGI		 (PMID:15843414) MGI PMID:15843414 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:23844108) MGI PMID:23844108 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tmem94 transmembrane protein 94 acts_upstream_of_or_within IMP (PMID:30526868) MGI PMID:30526868 NCBI chr11:115,656,245...115,689,859
Ensembl chr11:115,656,259...115,690,192 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within IMP (PMID:21945076) MGI PMID:21945076 NCBI chr 1:91,422,311...91,457,029
Ensembl chr 1:91,422,369...91,457,029 		JBrowse link
embryonic heart tube elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx20 T-box 20 involved_in IMP (MGI:3579960|PMID:15901664) BHF-UCL PMID:15901664 MGI:3579960 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:11076684) MGI PMID:11076684 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cimap3 ciliary microtubule associated protein 3 acts_upstream_of_or_within IMP (PMID:20643351) MGI PMID:20643351 NCBI chr 3:105,904,273...105,921,962
Ensembl chr 3:105,904,273...105,921,962 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (MGI:3054669|PMID:15475956) BHF-UCL PMID:15475956 MGI:3054669 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Invs inversin acts_upstream_of_or_within IMP (PMID:9192865) MGI PMID:9192865 NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:9192865) MGI PMID:9192865 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in IMP (MGI:3783941|PMID:17234970) BHF-UCL PMID:17234970 MGI:3783941 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IMP (MGI:4354447|PMID:19609448) BHF-UCL PMID:19609448 MGI:4354447 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac involved_in IMP (MGI:1267127|PMID:9628868) UniProt PMID:9628868 MGI:1267127 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in IMP (MGI:4946573|PMID:21305474) BHF-UCL PMID:21305474 MGI:4946573 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3579960|PMID:15901664) BHF-UCL PMID:15901664 MGI:3579960 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tead1 TEA domain family member 1 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014 		JBrowse link
G Tead2 TEA domain family member 2 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068 		JBrowse link
G Yap1 yes-associated protein 1 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597 		JBrowse link
embryonic hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in IMP (MGI:2158533|PMID:11806972) UniProt PMID:11806972 MGI:2158533 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within IMP (PMID:29115376) MGI PMID:29115376 NCBI chr15:82,012,101...82,026,404
Ensembl chr15:82,012,123...82,026,404 		JBrowse link
G Flt3l FMS-like tyrosine kinase 3 ligand involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,780,607...44,785,914
Ensembl chr 7:44,779,212...44,785,856 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within IMP (PMID:9576834) MGI PMID:9576834 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IMP
IGI		 (PMID:7550312)
(PMID:10631184)		 MGI PMID:7550312 PMID:10631184 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:16787915) MGI PMID:16787915 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Il3 interleukin 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:54,155,911...54,158,105
Ensembl chr11:54,156,129...54,158,103 		JBrowse link
G Kat6a K(lysine) acetyltransferase 6A acts_upstream_of_or_within IMP (PMID:16702405) MGI PMID:16702405 NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275 		JBrowse link
G Kdr kinase insert domain protein receptor involved_in IMP (MGI:74276|PMID:7596435) UniProt PMID:7596435 MGI:74276 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in IMP (MGI:4820916|PMID:20536544) UniProt PMID:20536544 MGI:4820916 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Kitl kit ligand involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278 		JBrowse link
G Klf1 Kruppel-like transcription factor 1 (erythroid) acts_upstream_of_or_within IMP (PMID:19409822)
(PMID:7753194)		 MGI PMID:7753194 PMID:19409822 NCBI chr 8:85,628,611...85,631,920
Ensembl chr 8:85,628,557...85,631,924 		JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A acts_upstream_of_or_within IMP (PMID:9639506) MGI PMID:9639506 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594 		JBrowse link
G Lmo2 LIM domain only 2 acts_upstream_of_or_within IGI (PMID:10631184) MGI PMID:10631184 NCBI chr 2:103,788,309...103,812,223
Ensembl chr 2:103,788,331...103,812,223 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:14500757) MGI PMID:14500757 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 acts_upstream_of_or_within IMP (PMID:11468159) MGI PMID:11468159 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Runx1 runt related transcription factor 1 acts_upstream_of_or_within IMP (PMID:16174759) MGI PMID:16174759 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 acts_upstream_of_or_within IDA
IMP		 (PMID:14612394) MGI PMID:14612394 NCBI chr 5:121,953,544...121,975,706
Ensembl chr 5:121,953,551...121,975,709 		JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 involved_in
acts_upstream_of_or_within		 IMP (MGI:3848867|PMID:19200805)
(PMID:9269761)
(PMID:15677556)
(PMID:7624372)
(PMID:7830794)		 UniProt
MGI		 PMID:7624372 PMID:7830794 PMID:9269761 PMID:15677556 PMID:19200805 MGI:3848867 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tnrc6c trinucleotide repeat containing 6C acts_upstream_of_or_within IMP (PMID:22187428) MGI PMID:22187428 NCBI chr11:117,544,529...117,654,265
Ensembl chr11:117,545,115...117,654,265 		JBrowse link
G Tpo thyroid peroxidase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:30,104,658...30,182,983
Ensembl chr12:30,104,658...30,182,623 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in IMP (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
embryonic liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin ISO RGD PMID:2450021 RGD:10046029 NCBI chr 6:121,612,920...121,656,197
Ensembl chr 6:121,612,335...121,656,186 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within IMP (PMID:29115376) MGI PMID:29115376 NCBI chr15:82,012,101...82,026,404
Ensembl chr15:82,012,123...82,026,404 		JBrowse link
G Gamt guanidinoacetate methyltransferase ISO RGD PMID:15918910 RGD:1599815 NCBI chr10:80,093,985...80,096,846
Ensembl chr10:80,093,985...80,096,846 		JBrowse link
G Gatm glycine amidinotransferase (L-arginine:glycine amidinotransferase) ISO RGD PMID:15918910 RGD:1599815 NCBI chr 2:122,424,954...122,441,758
Ensembl chr 2:122,424,948...122,441,784 		JBrowse link
G Insr insulin receptor ISO RGD PMID:1448116 RGD:14700803 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP (MGI:74339|PMID:7600998) BHF-UCL PMID:7600998 MGI:74339 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
embryonic lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fendrr Foxf1 adjacent non-coding developmental regulatory RNA acts_upstream_of_or_within IMP (PMID:25909911) MGI PMID:25909911 NCBI chr 8:121,781,621...121,809,849
Ensembl chr 8:121,781,621...121,809,849 		JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO RGD PMID:23894445 RGD:12911205 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Pdgfa platelet derived growth factor, alpha involved_in IMP (MGI:1098909|PMID:9374392) BHF-UCL PMID:9374392 MGI:1098909 NCBI chr 5:138,961,761...138,986,336
Ensembl chr 5:138,961,769...138,983,125 		JBrowse link
G Tbx4 T-box 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:27395007) MGI PMID:27395007 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP
IGI		 (PMID:27395007) MGI PMID:27395007 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:27395007) MGI PMID:27395007 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within IMP (PMID:20589884) MGI PMID:20589884 NCBI chr  X:100,317,697...100,342,540
Ensembl chr  X:100,317,636...100,341,071 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in IMP (MGI:5468075|PMID:23267094) BHF-UCL PMID:23267094 MGI:5468075 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IMP (PMID:16020517) MGI PMID:16020517 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO RGD
MGI		 PMID:11002343 GO_REF:0000096 MGI:4417868 RGD:1579866 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO RGD
MGI		 PMID:11002343 GO_REF:0000096 MGI:4417868 RGD:1579866 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674) MGI PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
embryonic organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:15843416) MGI PMID:15843416 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within IMP (PMID:9697704) MGI PMID:9697704 NCBI chr 4:46,343,644...46,345,774
Ensembl chr 4:46,343,609...46,346,412 		JBrowse link
G Hoxc4 homeobox C4 acts_upstream_of_or_within IMP (PMID:8660891) MGI PMID:8660891 NCBI chr15:102,926,531...102,945,281
Ensembl chr15:102,927,366...102,945,278 		JBrowse link
G Neurod1 neurogenic differentiation 1 involved_in IMP (MGI:1096974|PMID:9308961) BHF-UCL PMID:9308961 MGI:1096974 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095 		JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in IMP (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:16287714) MGI PMID:16287714 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arnt aryl hydrocarbon receptor nuclear translocator acts_upstream_of_or_within IMP (PMID:16287860) MGI PMID:16287860 NCBI chr 3:95,341,674...95,404,551
Ensembl chr 3:95,341,699...95,404,551 		JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within IMP (PMID:18794365) MGI PMID:18794365 NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within IGI (PMID:15509779) MGI PMID:15509779 NCBI chr 7:34,818,718...34,821,353
Ensembl chr 7:34,818,718...34,821,353 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta acts_upstream_of_or_within IGI (PMID:15509779) MGI PMID:15509779 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:16579983) MGI PMID:16579983 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Crxos cone-rod homeobox, opposite strand involved_in IDA (MGI:5307971|PMID:21084569) UniProt PMID:21084569 MGI:5307971 NCBI chr 7:15,616,542...15,637,945
Ensembl chr 7:15,616,542...15,637,945 		JBrowse link
G Csf2 colony stimulating factor 2 (granulocyte-macrophage) acts_upstream_of_or_within IMP (PMID:19228596) MGI PMID:19228596 NCBI chr11:54,138,096...54,140,725
Ensembl chr11:54,138,097...54,140,493 		JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within IMP (PMID:7618084) MGI PMID:7618084 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Epas1 endothelial PAS domain protein 1 acts_upstream_of_or_within IGI (PMID:16287860) MGI PMID:16287860 NCBI chr17:87,061,292...87,140,838
Ensembl chr17:87,061,128...87,140,838 		JBrowse link
G Esrrb estrogen related receptor, beta acts_upstream_of_or_within IMP (PMID:9285590) MGI PMID:9285590 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402 		JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within IMP (PMID:16039639) MGI PMID:16039639 NCBI chr 4:99,544,536...99,546,908
Ensembl chr 4:99,544,536...99,546,859 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:9043071) MGI PMID:9043071 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IMP (PMID:24855001) MGI PMID:24855001 NCBI chr12:51,790,504...51,876,540
Ensembl chr12:51,790,505...51,876,319 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP
IGI		 (PMID:16287860) MGI PMID:16287860 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Hsf1 heat shock factor 1 acts_upstream_of_or_within IMP (PMID:10545106) MGI PMID:10545106 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IMP (MGI:2181513|PMID:12087403) UniProt PMID:12087403 MGI:2181513 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:14500757) MGI PMID:14500757 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within IMP (PMID:26138477) MGI PMID:26138477 NCBI chr12:109,559,280...109,559,349
Ensembl chr12:109,559,280...109,559,349 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11456449) MGI PMID:11456449 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide involved_in IMP (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in IMP (MGI:4836293|PMID:20862291) BHF-UCL PMID:20862291 MGI:4836293 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within		 IMP (MGI:4836293|PMID:20862291)
(PMID:16301212)		 BHF-UCL
MGI		 PMID:16301212 PMID:20862291 MGI:4836293 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain acts_upstream_of_or_within IMP (PMID:15750184) MGI PMID:15750184 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Rtl1 retrotransposon Gaglike 1 acts_upstream_of_or_within IMP (PMID:26138477)
(PMID:28111885)		 MGI PMID:26138477 PMID:28111885 NCBI chr12:109,531,141...109,570,852
Ensembl chr12:109,555,627...109,566,764 		JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 acts_upstream_of_or_within IMP (PMID:21302256) MGI PMID:21302256 NCBI chr17:81,680,534...82,045,816
Ensembl chr17:81,680,534...82,045,806 		JBrowse link
G Sp1 trans-acting transcription factor 1 acts_upstream_of_or_within IGI (PMID:17584888) MGI PMID:17584888 NCBI chr15:102,314,751...102,344,839
Ensembl chr15:102,314,578...102,344,839 		JBrowse link
G Sp3 trans-acting transcription factor 3 acts_upstream_of_or_within IGI (PMID:17584888) MGI PMID:17584888 NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790 		JBrowse link
G Spint1 serine protease inhibitor, Kunitz type 1 acts_upstream_of_or_within IMP (PMID:15964823) MGI PMID:15964823 NCBI chr 2:119,067,841...119,079,995
Ensembl chr 2:119,067,843...119,080,008 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IMP (PMID:28893950) MGI PMID:28893950 NCBI chr 7:105,392,101...105,393,550
Ensembl chr 7:105,388,600...105,393,568 		JBrowse link
G Tfeb transcription factor EB involved_in IMP (MGI:1306865|PMID:9806910) UniProt PMID:9806910 MGI:1306865 NCBI chr17:48,047,962...48,103,341
Ensembl chr17:48,047,955...48,103,344 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within IMP (PMID:20178780) MGI PMID:20178780 NCBI chr 5:124,678,835...124,688,566
Ensembl chr 5:124,678,758...124,688,569 		JBrowse link
G Ttpa tocopherol (alpha) transfer protein acts_upstream_of_or_within IMP (PMID:16014812) MGI PMID:16014812 NCBI chr 4:20,007,889...20,030,823
Ensembl chr 4:20,007,938...20,030,785 		JBrowse link
embryonic placenta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1c cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within IMP (PMID:19276117) MGI PMID:19276117 NCBI chr 7:143,012,076...143,014,735
Ensembl chr 7:143,012,076...143,014,787 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IMP (MGI:5908476|PMID:28522536) UniProt PMID:28522536 MGI:5908476 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Setd2 SET domain containing 2 acts_upstream_of_or_within IMP (PMID:20133625) MGI PMID:20133625 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within IMP (PMID:22110054) MGI PMID:22110054 NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:7530222) MGI PMID:7530222 NCBI chr 3:115,903,669...115,923,337
Ensembl chr 3:115,903,598...115,923,337 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:11543617) MGI PMID:11543617 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
G Zfp568 zinc finger protein 568 involved_in
acts_upstream_of_or_within		 IMP (MGI:5908476|PMID:28522536)
(PMID:21094155)		 UniProt
MGI		 PMID:21094155 PMID:28522536 MGI:5908476 NCBI chr 7:29,683,380...29,727,707
Ensembl chr 7:29,683,380...29,727,707 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within IMP MGI MGI:48782 NCBI chr17:26,350,294...26,414,784
Ensembl chr17:26,357,662...26,414,785 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IGI		 (PMID:9664686) MGI PMID:9664686 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP
IGI		 (PMID:9664686) MGI PMID:9664686 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Col2a1 collagen, type II, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:20978074) MGI PMID:20978074 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within IGI (PMID:20978074) MGI PMID:20978074 NCBI chr15:102,862,961...102,865,136
Ensembl chr15:102,862,862...102,866,143 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:20978074) MGI PMID:20978074 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hyal1 hyaluronoglucosaminidase 1 acts_upstream_of_or_within IMP (PMID:18772348) MGI PMID:18772348 NCBI chr 9:107,454,149...107,458,898
Ensembl chr 9:107,454,126...107,458,909 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:18514492) MGI PMID:18514492 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:15728667), (PMID:9847249) MGI
GO_Central		 PMID:9847249 PMID:15728667 GO_REF:0000033 NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (PMID:11641221), (PMID:15728667) MGI PMID:11641221 PMID:15728667 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI
IMP		 (PMID:9847249)
(PMID:15728667)
(PMID:11641221)		 MGI PMID:9847249 PMID:11641221 PMID:15728667 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within IMP (PMID:19270745) MGI PMID:19270745 NCBI chr12:3,476,892...3,560,811
Ensembl chr12:3,476,857...3,556,852 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene acts_upstream_of_or_within IGI (PMID:11290297) MGI PMID:11290297 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:16712836) MGI PMID:16712836 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (PMID:16079159) MGI PMID:16079159 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:4100752) MGI PMID:4100752 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within IMP (PMID:11238884) MGI PMID:11238884 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:45,338,735...45,665,011
Ensembl chr 9:45,337,926...45,665,010 		JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:116,169,881...116,226,665
Ensembl chr12:116,169,882...116,226,642 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10471511) MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (PMID:23187127) MGI PMID:23187127 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9409679) MGI PMID:9409679 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in IMP (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:15728667) MGI PMID:15728667 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within IMP (PMID:7555718)
(PMID:7555726)		 MGI PMID:7555718 PMID:7555726 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IGI (PMID:15634706) MGI PMID:15634706 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:9441667) GO_Central
MGI		 PMID:9441667 GO_REF:0000033 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Hoxa4 homeobox A4 acts_upstream_of_or_within
involved_in		 IMP
IBA
IGI		 (PMID:7918106)
(PMID:7628700)		 MGI
GO_Central		 PMID:7628700 PMID:7918106 GO_REF:0000033 NCBI chr 6:52,166,662...52,168,683
Ensembl chr 6:52,166,651...52,168,733 		JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within IMP (PMID:17417799)
(PMID:7901120), (PMID:9603431)		 MGI PMID:7901120 PMID:9603431 PMID:17417799 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Hoxa7 homeobox A7 acts_upstream_of_or_within IGI (PMID:9784603) MGI PMID:9784603 NCBI chr 6:52,191,471...52,198,757
Ensembl chr 6:52,191,471...52,198,834 		JBrowse link
G Hoxa9 homeobox A9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:52,200,077...52,203,169
Ensembl chr 6:52,200,080...52,208,069 		JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within IGI (PMID:10885747) MGI PMID:10885747 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within IGI (PMID:10885747) MGI PMID:10885747 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838 		JBrowse link
G Hoxb3 homeobox B3 acts_upstream_of_or_within
involved_in		 IMP
IGI
IBA		 (PMID:9441667)
(PMID:10885747)		 MGI
GO_Central		 PMID:9441667 PMID:10885747 GO_REF:0000033 NCBI chr11:96,197,927...96,238,756
Ensembl chr11:96,214,152...96,238,756 		JBrowse link
G Hoxb4 homeobox B4 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:10885747)
(PMID:7628700)		 MGI
GO_Central		 PMID:7628700 PMID:10885747 GO_REF:0000033 NCBI chr11:96,209,093...96,212,464
Ensembl chr11:96,209,093...96,212,464 		JBrowse link
G Hoxb5 homeobox B5 acts_upstream_of_or_within IGI
IMP		 (PMID:7828847)
(PMID:10885747)		 MGI PMID:7828847 PMID:10885747 NCBI chr11:96,194,338...96,196,947
Ensembl chr11:96,194,162...96,196,947 		JBrowse link
G Hoxb6 homeobox B6 acts_upstream_of_or_within IGI (PMID:10885747) MGI PMID:10885747 NCBI chr11:96,183,647...96,192,395
Ensembl chr11:96,183,302...96,192,395 		JBrowse link
G Hoxb7 homeobox B7 acts_upstream_of_or_within IGI
IMP		 (PMID:10885747)
(PMID:9784603)		 MGI PMID:9784603 PMID:10885747 NCBI chr11:96,176,431...96,180,989
Ensembl chr11:96,177,449...96,180,988 		JBrowse link
G Hoxb8 homeobox B8 acts_upstream_of_or_within IGI
IMP		 (PMID:10885747)
(PMID:10559485)		 MGI PMID:10559485 PMID:10885747 NCBI chr11:96,170,227...96,176,151
Ensembl chr11:96,172,731...96,176,141 		JBrowse link
G Hoxb9 homeobox B9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:96,162,156...96,167,421
Ensembl chr11:96,162,283...96,167,421 		JBrowse link
G Hoxc4 homeobox C4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:102,926,531...102,945,281
Ensembl chr15:102,927,366...102,945,278 		JBrowse link
G Hoxc9 homeobox C9 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:7547473) GO_Central
MGI		 PMID:7547473 GO_REF:0000033 NCBI chr15:102,885,467...102,893,324
Ensembl chr15:102,884,874...102,893,531 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd3 homeobox D3 acts_upstream_of_or_within
involved_in		 IMP
IBA
IGI		 (PMID:7910549), (PMID:7913519)
(PMID:7913519)		 MGI
GO_Central		 PMID:7910549 PMID:7913519 GO_REF:0000033 NCBI chr 2:74,542,337...74,578,615
Ensembl chr 2:74,542,271...74,578,786 		JBrowse link
G Hoxd4 homeobox D4 acts_upstream_of_or_within
involved_in		 IGI
IBA
IMP		 (PMID:7628700)
(PMID:7750651)		 MGI
GO_Central		 PMID:7628700 PMID:7750651 GO_REF:0000033 NCBI chr 2:74,552,322...74,559,504
Ensembl chr 2:74,542,273...74,559,504 		JBrowse link
G Hoxd9 homeobox D9 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:10642795) GO_Central
MGI		 PMID:10642795 GO_REF:0000033 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10579729) MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within IMP (PMID:9799236) MGI PMID:9799236 NCBI chr17:48,126,253...48,145,616
Ensembl chr17:48,126,253...48,145,616 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (PMID:17420000) MGI PMID:17420000 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Men1 multiple endocrine neoplasia 1 acts_upstream_of_or_within IMP (PMID:17927973) MGI PMID:17927973 NCBI chr19:6,385,009...6,390,924
Ensembl chr19:6,385,009...6,390,921 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IMP (PMID:17360777) MGI PMID:17360777 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IMP (PMID:10929709) MGI PMID:10929709 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Osr2 odd-skipped related 2 acts_upstream_of_or_within IMP (PMID:15175245) MGI PMID:15175245 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within IGI (PMID:11290297) MGI PMID:11290297 NCBI chr11:97,579,647...97,593,260
Ensembl chr11:97,579,649...97,591,323 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within IC (MGI:3847057|PMID:19412548) GOC PMID:19412548 MGI:3847057 NCBI chr 5:65,763,062...65,855,579
Ensembl chr 5:65,763,064...65,855,616 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI
IMP		 (PMID:11532916), (PMID:9729491), (PMID:9876178)
(PMID:7758948)		 MGI PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:11532916), (PMID:9729491), (PMID:9876178) MGI PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Satb2 special AT-rich sequence binding protein 2 acts_upstream_of_or_within IMP (PMID:16960803)
(PMID:16751105)		 MGI PMID:16751105 PMID:16960803 NCBI chr 1:56,833,145...57,019,350
Ensembl chr 1:56,833,140...57,017,809 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six2 sine oculis-related homeobox 2 acts_upstream_of_or_within IGI (PMID:15634706) MGI PMID:15634706 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Tbx15 T-box 15 acts_upstream_of_or_within IGI
IMP		 (PMID:15728667) MGI PMID:15728667 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:15030764) MGI PMID:15030764 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A acts_upstream_of_or_within IMP (PMID:16818445) MGI PMID:16818445 NCBI chr11:59,197,675...59,224,378
Ensembl chr11:59,197,754...59,224,378 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:9389660) MGI PMID:9389660 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (PMID:16079159) MGI PMID:16079159 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9409679) MGI PMID:9409679 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:16221728) MGI PMID:16221728 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:3777712|PMID:14695376) UniProt PMID:14695376 MGI:3777712 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (PMID:17420000) MGI PMID:17420000 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in IMP (MGI:5468075|PMID:23267094) BHF-UCL PMID:23267094 MGI:5468075 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IMP (PMID:16020517) MGI PMID:16020517 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Nipbl NIPBL cohesin loading factor acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:19763162) MGI
GO_Central		 PMID:19763162 GO_REF:0000033 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Tbx1 T-box 1 involved_in ISS
ISO		 (MGI:1095819|PMID:9268629) UniProt
MGI		 PMID:9268629 GO_REF:0000119 MGI:1095819 MGI:4834177 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:25758223) MGI PMID:25758223 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Spint2 serine protease inhibitor, Kunitz type 2 acts_upstream_of_or_within IGI
IMP		 (PMID:19592578) MGI PMID:19592578 NCBI chr 7:28,955,755...28,981,484
Ensembl chr 7:28,955,748...28,981,337 		JBrowse link
G St14 suppression of tumorigenicity 14 (colon carcinoma) acts_upstream_of_or_within IGI (PMID:19592578) MGI PMID:19592578 NCBI chr 9:30,999,886...31,043,138
Ensembl chr 9:31,000,698...31,043,149 		JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 acts_upstream_of_or_within IMP (PMID:12783884) MGI PMID:12783884 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Aplnr apelin receptor involved_in IMP (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267 		JBrowse link
G Arl13b ADP-ribosylation factor-like 13B acts_upstream_of_or_within IMP (PMID:22554696) MGI PMID:22554696 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in IMP (MGI:6717247|PMID:32179481) UniProt PMID:32179481 MGI:6717247 NCBI chr12:103,287,401...103,322,260
Ensembl chr12:103,287,401...103,322,260 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:102,772,050...102,776,042
Ensembl chr11:102,772,030...102,776,042 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:15750185) MGI PMID:15750185 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within IMP (PMID:23742838) MGI PMID:23742838 NCBI chr16:3,725,058...3,760,163
Ensembl chr16:3,726,665...3,759,011 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IGI (MGI:5439040|PMID:22841628) BHF-UCL PMID:22841628 MGI:5439040 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IGI (MGI:5439040|PMID:22841628) BHF-UCL PMID:22841628 MGI:5439040 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Eng endoglin involved_in IMP (MGI:1337912|PMID:10348742), (MGI:4368063|PMID:19703439) BHF-UCL PMID:10348742 PMID:19703439 MGI:1337912 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:10411502) MGI PMID:10411502 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Folr1 folate receptor alpha involved_in IMP (MGI:3721767|PMID:17286298) BHF-UCL PMID:17286298 MGI:3721767 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (MGI:3052615|PMID:15310850) BHF-UCL PMID:15310850 MGI:3052615 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (PMID:9486664) MGI PMID:9486664 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:9500551) MGI PMID:9500551 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:9171826) MGI PMID:9171826 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:14659802) MGI PMID:14659802 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:18930042) MGI PMID:18930042 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (PMID:15930098) MGI PMID:15930098 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within IMP (PMID:17027958) MGI PMID:17027958 NCBI chr16:49,519,657...49,585,489
Ensembl chr16:49,519,596...49,585,489 		JBrowse link
G Ihh Indian hedgehog involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A acts_upstream_of_or_within IMP (PMID:25463925) MGI PMID:25463925 NCBI chr19:4,366,172...4,448,749
Ensembl chr19:4,364,447...4,448,313 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within IMP (PMID:10330409) MGI PMID:10330409 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within IMP (PMID:12522123) MGI PMID:12522123 NCBI chr19:45,221,123...45,225,280
Ensembl chr19:45,221,123...45,224,251 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in IMP (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IMP (PMID:16000382) MGI PMID:16000382 NCBI chr18:10,725,523...10,822,969
Ensembl chr18:10,725,548...10,818,704 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:16510504)
(PMID:7628699), (PMID:9192865)		 MGI PMID:7628699 PMID:9192865 PMID:16510504 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IGI (PMID:16496285) MGI PMID:16496285 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Notch1 notch 1 involved_in IGI (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 involved_in IGI (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within IMP (PMID:17884984) MGI PMID:17884984 NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:17573777) MGI PMID:17573777 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:10557208) MGI PMID:10557208 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in TAS (MGI:3056004|PMID:15466160) BHF-UCL PMID:15466160 MGI:3056004 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of_or_within		 IMP (MGI:5142377|PMID:11517919)
(PMID:10411502), (PMID:10500184)		 BHF-UCL
MGI		 PMID:10411502 PMID:10500184 PMID:11517919 MGI:5142377 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in
acts_upstream_of_or_within		 IMP (MGI:3716378|PMID:17655922)
(PMID:17610846)		 UniProt
MGI		 PMID:17610846 PMID:17655922 MGI:3716378 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:15929941) MGI PMID:15929941 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Stil Scl/Tal1 interrupting locus acts_upstream_of_or_within IMP (PMID:10385121) MGI PMID:10385121 NCBI chr 4:114,857,287...114,900,404
Ensembl chr 4:114,857,356...114,900,393 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:16155214) MGI PMID:16155214 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
G Tbx20 T-box 20 involved_in
acts_upstream_of_or_within		 IMP
IBA		 (MGI:3604925|PMID:15843409)
(PMID:15901664)
(PMID:15843407)		 BHF-UCL
GO_Central
MGI		 PMID:15843407 PMID:15843409 PMID:15901664 GO_REF:0000033 MGI:3604925 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:18723448)
(PMID:17460765)		 MGI PMID:17460765 PMID:18723448 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx6 T-box 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:126,380,655...126,384,720
Ensembl chr 7:126,380,655...126,384,732 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within IMP (PMID:20178780) MGI PMID:20178780 NCBI chr 5:124,678,835...124,688,566
Ensembl chr 5:124,678,758...124,688,569 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 involved_in IMP (MGI:2157686|PMID:11440971) UniProt PMID:11440971 MGI:2157686 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:16291790) MGI PMID:16291790 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (PMID:15384171)
(PMID:16496285)		 MGI PMID:15384171 PMID:16496285 GO_REF:0000119 MGI:4834177 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IMP (PMID:15677567), (PMID:18550854)
(PMID:19182774)		 MGI PMID:15677567 PMID:18550854 PMID:19182774 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952 		JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene acts_upstream_of_or_within IGI (PMID:11921339) MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IMP (PMID:23536097) MGI PMID:23536097 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:15543141)
(PMID:16145671)		 MGI PMID:15543141 PMID:16145671 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:9668038) MGI PMID:9668038 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Atp6v1b1 ATPase, H+ transporting, lysosomal V1 subunit B1 involved_in
NOT|involved_in		 ISO
IMP		 (PMID:19639346)
(MGI:2669353|PMID:12782355)		 UniProt
UniProt		 PMID:12782355 PMID:19639346 MGI:2669353 NCBI chr 6:83,719,999...83,735,837
Ensembl chr 6:83,719,972...83,735,837 		JBrowse link
G Atp8a2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 involved_in IMP (MGI:5574432|PMID:24413176) UniProt PMID:24413176 MGI:5574432 NCBI chr14:59,884,980...60,324,363
Ensembl chr14:59,875,989...60,434,628 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within IGI (PMID:11921339) MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753 		JBrowse link
G Cdh23 cadherin related 23 (otocadherin) acts_upstream_of_or_within IMP (PMID:15925194)
(PMID:7610888)		 MGI PMID:7610888 PMID:15925194 MGI:61210 NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within IMP (PMID:12842012) MGI PMID:12842012 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 ISO
IMP
IBA		 (PMID:15353999) MGI
GO_Central		 PMID:15353999 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Chrna10 cholinergic receptor, nicotinic, alpha polypeptide 10 acts_upstream_of_or_within IMP (PMID:18077337) MGI PMID:18077337 NCBI chr 7:101,760,469...101,766,564
Ensembl chr 7:101,760,473...101,766,035 		JBrowse link
G Chrna9 cholinergic receptor, nicotinic, alpha polypeptide 9 acts_upstream_of_or_within IMP (PMID:18077337) MGI PMID:18077337 NCBI chr 5:66,092,317...66,134,823
Ensembl chr 5:66,092,264...66,134,669 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:1952599) MGI PMID:1952599 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:9165353) MGI PMID:9165353 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in NAS (MGI:1321372|PMID:9858718) UniProt PMID:9858718 MGI:1321372 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IMP
IGI		 (PMID:12142028)
(PMID:16900517)		 MGI PMID:12142028 PMID:16900517 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within IGI (PMID:16900517) MGI PMID:16900517 NCBI chr 6:6,863,272...6,867,965
Ensembl chr 6:6,863,334...6,868,568 		JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP (MGI:1859095|PMID:10839360) UniProt PMID:10839360 MGI:1859095 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP
IGI		 (PMID:15817220)
(PMID:16916509)
(PMID:10471511)		 MGI PMID:10471511 PMID:15817220 PMID:16916509 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI
IMP		 (PMID:16691564)
(PMID:11062007)		 MGI PMID:11062007 PMID:16691564 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:15809037) MGI PMID:15809037 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within IMP (PMID:15328018) MGI PMID:15328018 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:12194867) MGI PMID:12194867 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:10934262) MGI PMID:10934262 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IGI
IMP		 (PMID:16691564) MGI PMID:16691564 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Foxi1 forkhead box I1 acts_upstream_of_or_within IMP (PMID:12642503) MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within IGI
IDA		 (PMID:18991062) MGI PMID:18991062 NCBI chr 2:80,242,314...80,277,740
Ensembl chr 2:80,242,314...80,277,969 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within IGI (PMID:16495441) MGI PMID:16495441 NCBI chr14:65,429,890...65,499,912
Ensembl chr14:65,429,898...65,499,912 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IGI (PMID:16495441) MGI PMID:16495441 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:20652952) MGI PMID:20652952 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IMP (PMID:21553382)
(PMID:11135239)		 MGI PMID:11135239 PMID:21553382 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:15829521), (PMID:15996652) MGI PMID:15829521 PMID:15996652 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Gfi1 growth factor independent 1 transcription repressor acts_upstream_of_or_within IMP (PMID:12441305) MGI PMID:12441305 NCBI chr 5:107,864,521...107,873,671
Ensembl chr 5:107,864,523...107,873,902 		JBrowse link
G Hmx2 H6 homeobox 2 acts_upstream_of_or_within IMP
IGI		 (PMID:11748138)
(PMID:15363417)		 MGI PMID:11748138 PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743 		JBrowse link
G Hmx3 H6 homeobox 3 acts_upstream_of_or_within IGI
IMP		 (PMID:15363417)
(PMID:9435283)		 MGI PMID:9435283 PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IMP (PMID:15367676) MGI PMID:15367676 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 5:28,276,410...28,283,660
Ensembl chr 5:28,276,361...28,283,660 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 1:121,232,082...121,260,391
Ensembl chr 1:121,232,082...121,260,318 		JBrowse link
G Itga8 integrin alpha 8 acts_upstream_of_or_within IMP (PMID:10742111) MGI PMID:10742111 NCBI chr 2:12,111,443...12,306,755
Ensembl chr 2:12,111,443...12,306,733 		JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in IMP (PMID:11226272) MGI PMID:11226272 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779 		JBrowse link
G Kcnq4 potassium voltage-gated channel, subfamily Q, member 4 acts_upstream_of_or_within IMP (PMID:16437162) MGI PMID:16437162 NCBI chr 4:120,553,331...120,605,809
Ensembl chr 4:120,553,335...120,605,809 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:16325169) MGI PMID:16325169 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
G Myo15a myosin XVA acts_upstream_of_or_within IMP (PMID:11718241), (PMID:14724386) MGI PMID:11718241 PMID:14724386 NCBI chr11:60,360,165...60,419,195
Ensembl chr11:60,360,165...60,419,195 		JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:7493015) GO_Central
MGI		 PMID:7493015 GO_REF:0000033 NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within IMP (PMID:15389316)
(PMID:11753415)
(PMID:5795329)		 MGI PMID:5795329 PMID:11753415 PMID:15389316 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Neurog1 neurogenin 1 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:16145671) MGI PMID:16145671 GO_REF:0000119 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within IMP (PMID:11784868) MGI PMID:11784868 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447 		JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within IMP (PMID:17616930) MGI PMID:17616930 NCBI chr11:68,100,190...68,277,652
Ensembl chr11:68,100,190...68,291,649 		JBrowse link
G Otop1 otopetrin 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12651873) GO_Central
MGI		 PMID:12651873 GO_REF:0000033 NCBI chr 5:38,434,748...38,461,560
Ensembl chr 5:38,433,316...38,461,552 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI
IMP		 (PMID:10225993) MGI PMID:10225993 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IGI (PMID:10225993) MGI PMID:10225993 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:84247|PMID:8951055)
(PMID:16916509)
(PMID:15242798)
(MGI:4822275|PMID:20727173)		 DFLAT
MGI
UniProt		 PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 MGI:4822275 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IGI (MGI:4822275|PMID:20727173) UniProt PMID:20727173 MGI:4822275 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pou4f3 POU domain, class 4, transcription factor 3 acts_upstream_of_or_within IMP (PMID:12585968) MGI PMID:12585968 NCBI chr18:42,527,662...42,529,158
Ensembl chr18:42,527,604...42,530,314 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Ptprq protein tyrosine phosphatase receptor type Q acts_upstream_of_or_within IMP (PMID:14534255) MGI PMID:14534255 NCBI chr10:107,350,224...107,555,939
Ensembl chr10:107,352,910...107,555,912 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IMP (PMID:18606138) MGI PMID:18606138 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within IMP (PMID:19936227) MGI PMID:19936227 NCBI chr14:110,984,770...110,992,640
Ensembl chr14:110,986,012...110,992,581 		JBrowse link
G Sobp sine oculis binding protein acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:16962269) MGI
GO_Central		 PMID:16962269 GO_REF:0000033 NCBI chr10:42,878,484...43,059,144
Ensembl chr10:42,878,496...43,050,526 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:15846349) MGI PMID:15846349 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within IGI
IMP		 (PMID:15809037) MGI PMID:15809037 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:16600992)
(PMID:15652707)
(PMID:15084464)
(PMID:12913075)		 MGI PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx3 T-box 3 involved_in IGI (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,318,917...56,326,816
Ensembl chr13:56,321,517...56,326,698 		JBrowse link
G Tmie transmembrane inner ear acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:12140191) MGI
GO_Central		 PMID:12140191 GO_REF:0000033 NCBI chr 9:110,694,755...110,709,141
Ensembl chr 9:110,694,779...110,709,181 		JBrowse link
G Ush1c USH1 protein network component harmonin acts_upstream_of_or_within IMP (PMID:14519688) MGI PMID:14519688 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within IMP (PMID:12588793), (PMID:1927362) MGI PMID:1927362 PMID:12588793 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IGI (PMID:15961523) MGI PMID:15961523 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IGI (PMID:15961523) MGI PMID:15961523 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP
IDA		 (PMID:18991062) MGI PMID:18991062 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
labyrinthine layer blood vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 acts_upstream_of_or_within IMP (PMID:12783884) MGI PMID:12783884 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IMP (PMID:12446788) MGI PMID:12446788 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Esx1 extraembryonic, spermatogenesis, homeobox 1 acts_upstream_of_or_within IMP (PMID:9806555) MGI PMID:9806555 NCBI chr  X:136,016,146...136,022,880
Ensembl chr  X:136,016,146...136,022,832 		JBrowse link
G Fbxw8 F-box and WD-40 domain protein 8 acts_upstream_of_or_within IMP (PMID:16880526) MGI PMID:16880526 NCBI chr 5:118,203,046...118,293,523
Ensembl chr 5:118,203,030...118,293,529 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within IMP (PMID:11092808) MGI PMID:11092808 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 acts_upstream_of_or_within IMP (PMID:26764350) MGI PMID:26764350 NCBI chr11:84,723,187...84,761,668
Ensembl chr11:84,723,187...84,761,643 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IMP (MGI:4453944|PMID:20122914) BHF-UCL PMID:20122914 MGI:4453944 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IGI (MGI:3040159|PMID:15107403) BHF-UCL PMID:15107403 MGI:3040159 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IGI (MGI:3040159|PMID:15107403) BHF-UCL PMID:15107403 MGI:3040159 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within IMP (PMID:17405882) MGI PMID:17405882 NCBI chr 1:36,107,481...36,145,527
Ensembl chr 1:36,107,481...36,145,527 		JBrowse link
G Junb jun B proto-oncogene acts_upstream_of_or_within IMP (PMID:10022836) MGI PMID:10022836 NCBI chr 8:85,703,538...85,705,377
Ensembl chr 8:85,701,113...85,705,347 		JBrowse link
G Llgl2 LLGL2 scribble cell polarity complex component acts_upstream_of_or_within IMP (PMID:21606200) MGI PMID:21606200 NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IMP (PMID:14622137) MGI PMID:14622137 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within IMP (PMID:12368298)
(PMID:12556486)		 MGI PMID:12368298 PMID:12556486 NCBI chr 2:155,232,585...155,315,741
Ensembl chr 2:155,232,576...155,315,814 		JBrowse link
G Nfe2 nuclear factor, erythroid derived 2 acts_upstream_of_or_within IMP (PMID:21558372) MGI PMID:21558372 NCBI chr15:103,156,640...103,166,809
Ensembl chr15:103,156,639...103,166,830 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like acts_upstream_of_or_within IMP (PMID:17028112) MGI PMID:17028112 NCBI chr  X:71,962,127...72,002,134
Ensembl chr  X:71,962,163...72,002,120 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:17573777) MGI PMID:17573777 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Plcd1 phospholipase C, delta 1 acts_upstream_of_or_within IGI (PMID:16314520) MGI PMID:16314520 NCBI chr 9:118,900,595...118,922,570
Ensembl chr 9:118,900,595...118,922,570 		JBrowse link
G Plcd3 phospholipase C, delta 3 acts_upstream_of_or_within IGI (PMID:16314520) MGI PMID:16314520 NCBI chr11:102,960,062...102,992,484
Ensembl chr11:102,961,130...102,992,484 		JBrowse link
G Plg plasminogen acts_upstream_of_or_within IMP (PMID:12900459) MGI PMID:12900459 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:3056004|PMID:15466160) BHF-UCL PMID:15466160 MGI:3056004 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Syde1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) acts_upstream_of_or_within IMP (PMID:27917469) MGI PMID:27917469 NCBI chr10:78,420,336...78,427,798
Ensembl chr10:78,420,337...78,427,798 		JBrowse link
G Synb syncytin b acts_upstream_of_or_within IMP (PMID:22032925) MGI PMID:22032925 NCBI chr14:69,527,827...69,549,857
Ensembl chr14:69,526,793...69,531,748 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in IMP (MGI:4453264|PMID:20178780) CACAO PMID:20178780 MGI:4453264 NCBI chr 5:124,678,835...124,688,566
Ensembl chr 5:124,678,758...124,688,569 		JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within IMP (PMID:25184477) MGI PMID:25184477 NCBI chr12:86,725,474...86,742,462
Ensembl chr12:86,725,474...86,738,865 		JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within IMP (PMID:25184477) MGI PMID:25184477 NCBI chr 1:190,679,843...190,711,500
Ensembl chr 1:190,679,843...190,711,493 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of_or_within IMP (PMID:8951051) MGI PMID:8951051 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within IMP (PMID:15485903) MGI PMID:15485903 NCBI chr17:74,835,247...75,010,351
Ensembl chr17:74,835,290...75,010,351 		JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within IGI (PMID:19853565) MGI PMID:19853565 NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080 		JBrowse link
G Cdx4 caudal type homeobox 4 acts_upstream_of_or_within IGI (PMID:19853565) MGI PMID:19853565 NCBI chr  X:102,365,004...102,373,830
Ensembl chr  X:102,365,004...102,374,198 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within IMP (PMID:14673158) MGI PMID:14673158 NCBI chr  X:101,290,984...101,295,787
Ensembl chr  X:101,290,987...101,295,787 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 acts_upstream_of_or_within IMP (PMID:16966370) MGI PMID:16966370 NCBI chr 8:125,635,325...125,676,063
Ensembl chr 8:125,635,326...125,676,063 		JBrowse link
G Gab1 growth factor receptor bound protein 2-associated protein 1 acts_upstream_of_or_within IMP (PMID:10779359) MGI PMID:10779359 NCBI chr 8:81,491,060...81,607,151
Ensembl chr 8:81,491,067...81,607,148 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 acts_upstream_of_or_within IMP (PMID:26764350) MGI PMID:26764350 NCBI chr11:84,723,187...84,761,668
Ensembl chr11:84,723,187...84,761,643 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IMP (PMID:10209122) MGI PMID:10209122 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within IMP (PMID:26138477) MGI PMID:26138477 NCBI chr12:109,559,280...109,559,349
Ensembl chr12:109,559,280...109,559,349 		JBrowse link
G Pcdh12 protocadherin 12 acts_upstream_of_or_within IMP (PMID:18477666) MGI PMID:18477666 NCBI chr18:38,400,145...38,417,454
Ensembl chr18:38,400,142...38,417,455 		JBrowse link
G Rtl1 retrotransposon Gaglike 1 acts_upstream_of_or_within IMP (PMID:28111885)
(PMID:26138477)		 MGI PMID:26138477 PMID:28111885 NCBI chr12:109,531,141...109,570,852
Ensembl chr12:109,555,627...109,566,764 		JBrowse link
G Senp2 SUMO/sentrin specific peptidase 2 acts_upstream_of_or_within IMP (PMID:19090619) MGI PMID:19090619 NCBI chr16:21,828,182...21,868,019
Ensembl chr16:21,828,234...21,868,019 		JBrowse link
G Syde1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) acts_upstream_of_or_within IMP (PMID:27917469) MGI PMID:27917469 NCBI chr10:78,420,336...78,427,798
Ensembl chr10:78,420,337...78,427,798 		JBrowse link
G Syna syncytin a acts_upstream_of_or_within IMP (PMID:19564597) MGI PMID:19564597 NCBI chr 5:134,586,108...134,605,891
Ensembl chr 5:134,587,000...134,589,025 		JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within IMP (PMID:25184477) MGI PMID:25184477 NCBI chr 1:190,679,843...190,711,500
Ensembl chr 1:190,679,843...190,711,493 		JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esx1 extraembryonic, spermatogenesis, homeobox 1 acts_upstream_of_or_within IMP (PMID:9806555) MGI PMID:9806555 NCBI chr  X:136,016,146...136,022,880
Ensembl chr  X:136,016,146...136,022,832 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within IMP (PMID:17961533) MGI PMID:17961533 NCBI chr 4:127,248,600...127,251,957
Ensembl chr 4:127,248,602...127,251,974 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 acts_upstream_of_or_within IGI (PMID:20685850) MGI PMID:20685850 NCBI chr12:4,297,362...4,569,452
Ensembl chr12:4,297,362...4,527,182 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within IGI (PMID:20685850) MGI PMID:20685850 NCBI chr 2:165,834,557...165,915,162
Ensembl chr 2:165,834,556...165,915,162 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IMP (PMID:15569927) MGI PMID:15569927 NCBI chr10:116,905,324...116,986,311
Ensembl chr10:116,905,332...116,984,439 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEP (MGI:3836138|PMID:11850194) BHF-UCL PMID:11850194 MGI:3836138 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
middle ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 acts_upstream_of_or_within IMP (PMID:8152482) MGI PMID:8152482 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
G Ednra endothelin receptor type A involved_in IMP (PMID:19185569) MGI PMID:19185569 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:27959908) MGI PMID:27959908 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10471511) MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 acts_upstream_of_or_within IMP (PMID:18219393) MGI PMID:18219393 NCBI chr10:22,978,861...23,226,785
Ensembl chr10:22,978,862...23,226,684 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:15630379) MGI PMID:15630379 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP (PMID:17525797) MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gsc goosecoid homeobox involved_in IMP (MGI:3035838|PMID:14973294) UniProt PMID:14973294 MGI:3035838 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP
IGI		 (PMID:16221728)
(PMID:15634706)
(PMID:15861402)		 MGI PMID:15634706 PMID:15861402 PMID:16221728 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 5:28,276,410...28,283,660
Ensembl chr 5:28,276,361...28,283,660 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 1:121,232,082...121,260,391
Ensembl chr 1:121,232,082...121,260,318 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IMP (PMID:16330189) MGI PMID:16330189 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Myc myelocytomatosis oncogene acts_upstream_of_or_within IMP (PMID:17523175) MGI PMID:17523175 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:17712420) MGI PMID:17712420 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within IMP (PMID:14973294) MGI PMID:14973294 NCBI chr 5:41,918,826...41,921,563
Ensembl chr 5:41,918,826...41,921,844 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator acts_upstream_of_or_within IMP (PMID:16571658) MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:7758948)
(PMID:9729491)		 MGI PMID:7758948 PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within IMP (PMID:21062742) MGI PMID:21062742 NCBI chr11:114,558,644...114,563,159
Ensembl chr11:114,559,350...114,563,157 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12874121) MGI PMID:12874121 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six2 sine oculis-related homeobox 2 acts_upstream_of_or_within IGI (PMID:15634706) MGI PMID:15634706 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:20501333)
(PMID:16600992)
(PMID:15652707)		 MGI PMID:15652707 PMID:16600992 PMID:20501333 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tshz1 teashirt zinc finger family member 1 acts_upstream_of_or_within IMP (PMID:17586487) MGI PMID:17586487 NCBI chr18:84,029,752...84,105,833
Ensembl chr18:84,029,752...84,105,831 		JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74-like factor 5 acts_upstream_of_or_within IMP (PMID:24859262) MGI PMID:24859262 NCBI chr 2:103,242,443...103,281,334
Ensembl chr 2:103,242,033...103,281,334 		JBrowse link
G Snai1 snail family zinc finger 1 acts_upstream_of_or_within IDA (PMID:9676199) MGI PMID:9676199 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box 2 involved_in IMP (MGI:3039059|PMID:15042700) BHF-UCL PMID:15042700 MGI:3039059 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
notochord cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within IMP (PMID:11287184) MGI PMID:11287184 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
notochord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat involved_in IEP (MGI:76306|PMID:7586755) BHF-UCL PMID:7586755 MGI:76306 NCBI chr11:12,186,676...12,415,022
Ensembl chr11:12,186,608...12,414,960 		JBrowse link
G Col18a1 collagen, type XVIII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:76,888,013...77,002,351
Ensembl chr10:76,888,012...77,002,382 		JBrowse link
G Col27a1 collagen, type XXVII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:63,132,246...63,253,228
Ensembl chr 4:63,132,241...63,253,228 		JBrowse link
G Col2a1 collagen, type II, alpha 1 involved_in IEP
IBA		 (MGI:86312|PMID:9119111) UniProt
GO_Central		 PMID:9119111 GO_REF:0000033 MGI:86312 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within IMP (PMID:16368929) MGI PMID:16368929 NCBI chr 6:122,582,362...122,587,046
Ensembl chr 6:122,582,362...122,587,046 		JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in IEP (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within IMP (PMID:16831833) MGI PMID:16831833 NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within IMP (PMID:15231714), (PMID:17884984)
(PMID:20197654)
(PMID:13837681), (PMID:15550757), (PMID:8155581)		 MGI PMID:8155581 PMID:13837681 PMID:15231714 PMID:15550757 PMID:17884984 More... NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IEP (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Stil Scl/Tal1 interrupting locus acts_upstream_of_or_within IMP (PMID:10385121) MGI PMID:10385121 NCBI chr 4:114,857,287...114,900,404
Ensembl chr 4:114,857,356...114,900,393 		JBrowse link
G T brachyury, T-box transcription factor T acts_upstream_of_or_within IMP (PMID:15384171)
(PMID:8155581)
(PMID:8293872)		 MGI PMID:8155581 PMID:8293872 PMID:15384171 NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328 		JBrowse link
G Tead1 TEA domain family member 1 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014 		JBrowse link
G Tead2 TEA domain family member 2 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068 		JBrowse link
G Yap1 yes-associated protein 1 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597 		JBrowse link
notochord formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs family member 2 involved_in IMP (MGI:5296388|PMID:22072575) UniProt PMID:22072575 MGI:5296388 NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115 		JBrowse link
G Efna1 ephrin A1 acts_upstream_of_or_within IGI (PMID:11287184) MGI PMID:11287184 NCBI chr 3:89,179,037...89,188,258
Ensembl chr 3:89,179,040...89,188,449 		JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within IMP
IGI		 (PMID:11287184) MGI PMID:11287184 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
G T brachyury, T-box transcription factor T acts_upstream_of_or_within IMP (PMID:7589801) MGI PMID:7589801 NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328 		JBrowse link
G T2 brachyury 2 acts_upstream_of_or_within IMP (PMID:7589801) MGI PMID:7589801 NCBI chr17:8,574,590...8,661,323
Ensembl chr17:8,574,824...8,642,345 		JBrowse link
notochord morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within IMP (PMID:11287184) MGI PMID:11287184 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A acts_upstream_of_or_within IMP (PMID:22949634) MGI PMID:22949634 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within IMP (PMID:16831833) MGI PMID:16831833 NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:16916379) MGI PMID:16916379 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Ppp1r35 protein phosphatase 1, regulatory subunit 35 involved_in IMP (MGI:6442352|PMID:32628936) UniProt PMID:32628936 MGI:6442352 NCBI chr 5:137,777,138...137,778,372
Ensembl chr 5:137,777,111...137,778,372 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within IGI (PMID:25813538) MGI PMID:25813538 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:25813538) MGI PMID:25813538 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
notochord regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within IMP (PMID:23129809) MGI PMID:23129809 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 acts_upstream_of_or_within IGI (PMID:16611695) MGI PMID:16611695 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IGI (PMID:16611695) MGI PMID:16611695 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six3 sine oculis-related homeobox 3 involved_in IDA (MGI:2136715|PMID:11458394) UniProt PMID:11458394 MGI:2136715 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 TAS
IGI		 (MGI:5424107|PMID:22235191)
(PMID:14623822)		 ParkinsonsUK-UCL
MGI		 PMID:14623822 PMID:22235191 MGI:5424107 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf3 fibroblast growth factor 3 involved_in
acts_upstream_of_or_within		 TAS
IGI		 (MGI:5424107|PMID:22235191)
(PMID:17601531)		 ParkinsonsUK-UCL
MGI		 PMID:17601531 PMID:22235191 MGI:5424107 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 TAS
IGI		 (MGI:5424107|PMID:22235191)
(PMID:17601531)		 ParkinsonsUK-UCL
MGI		 PMID:17601531 PMID:22235191 MGI:5424107 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 TAS
IMP		 (MGI:5424107|PMID:22235191)
(PMID:9435295)		 ParkinsonsUK-UCL
MGI		 PMID:9435295 PMID:22235191 MGI:5424107 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (PMID:9620767) MGI PMID:9620767 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:18377888) MGI PMID:18377888 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tcap titin-cap involved_in IEP (MGI:1314551|PMID:9817758) BHF-UCL PMID:9817758 MGI:1314551 NCBI chr11:98,274,637...98,275,779
Ensembl chr11:98,274,637...98,275,779 		JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:16916509) MGI PMID:16916509 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:17074316) MGI PMID:17074316 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted acts_upstream_of_or_within IMP (PMID:5367369) MGI PMID:5367369 NCBI chr13:38,786,674...38,821,093
Ensembl chr13:38,776,818...38,819,085 		JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 acts_upstream_of_or_within IGI (PMID:24086156) MGI PMID:24086156 NCBI chr 6:94,581,510...94,677,205
Ensembl chr 6:94,581,510...94,677,139 		JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:24086156) GO_Central
MGI		 PMID:24086156 GO_REF:0000033 NCBI chr10:125,802,088...125,851,228
Ensembl chr10:125,802,037...125,851,228 		JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:12,716,168...12,872,461
Ensembl chr18:12,732,953...12,871,920 		JBrowse link
outer ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10471511) MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:15630379) MGI PMID:15630379 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP (PMID:17525797) MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IGI (PMID:18952847) MGI PMID:18952847 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IGI (PMID:18952847) MGI PMID:18952847 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator acts_upstream_of_or_within IMP (PMID:16571658) MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:16600992) MGI PMID:16600992 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IMP (PMID:17127413) MGI PMID:17127413 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 involved_in IMP (MGI:5635320|PMID:25677106) UniProt PMID:25677106 MGI:5635320 NCBI chr10:62,494,822...62,561,907
Ensembl chr10:62,494,822...62,561,907 		JBrowse link
primitive erythrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 acts_upstream_of_or_within IMP (PMID:9139715) MGI PMID:9139715 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310 		JBrowse link
G Hscb HscB iron-sulfur cluster co-chaperone involved_in IMP (MGI:6438356|PMID:32634119) UniProt PMID:32634119 MGI:6438356 NCBI chr 5:110,976,945...110,987,647
Ensembl chr 5:110,976,936...110,987,643 		JBrowse link
G Ldb1 LIM domain binding 1 involved_in TAS (MGI:4834059|PMID:20570862) BHF-UCL PMID:20570862 MGI:4834059 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:16287714) MGI PMID:16287714 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within IMP (PMID:14729577) MGI PMID:14729577 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 acts_upstream_of_or_within IMP (PMID:9553047) MGI PMID:9553047 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
primitive hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hscb HscB iron-sulfur cluster co-chaperone involved_in IMP (MGI:6438356|PMID:32634119) UniProt PMID:32634119 MGI:6438356 NCBI chr 5:110,976,945...110,987,647
Ensembl chr 5:110,976,936...110,987,643 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444 		JBrowse link
G Thoc5 THO complex 5 involved_in IMP (MGI:4943620|PMID:20051105) UniProt PMID:20051105 MGI:4943620 NCBI chr11:4,845,339...4,878,867
Ensembl chr11:4,845,320...4,878,867 		JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing homolog 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within IGI (PMID:24595170) MGI PMID:24595170 NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within IGI (PMID:24595170) MGI PMID:24595170 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:152,391,475...152,403,686
Ensembl chr 4:152,391,476...152,403,450 		JBrowse link
regulation of primitive erythrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 acts_upstream_of_or_within IGI (PMID:14504093) MGI PMID:14504093 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IGI (PMID:14504093) MGI PMID:14504093 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A involved_in IMP (MGI:5284774|PMID:17707228) UniProt PMID:17707228 MGI:5284774 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase acts_upstream_of_or_within IMP (PMID:21715335) MGI PMID:21715335 NCBI chr  X:137,814,980...137,911,281
Ensembl chr  X:137,815,179...137,911,281 		JBrowse link
G Phlda2 pleckstrin homology like domain, family A, member 2 acts_upstream_of_or_within IMP (PMID:26476147) MGI PMID:26476147 NCBI chr 7:143,055,282...143,056,882
Ensembl chr 7:143,055,282...143,056,887 		JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15765517) MGI PMID:15765517 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IGI (PMID:19855134) MGI PMID:19855134 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10072433) MGI PMID:10072433 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI (PMID:17601531) MGI PMID:17601531 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within IGI (PMID:17601531) MGI PMID:17601531 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within IMP (PMID:11784868) MGI PMID:11784868 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IGI (PMID:19855134) MGI PMID:19855134 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx3 T-box 3 involved_in IMP (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:21980308) MGI PMID:21980308 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin-like growth factor 2 involved_in IMP (MGI:5424276|PMID:22562201) CACAO PMID:22562201 MGI:5424276 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Tex19.1 testis expressed gene 19.1 acts_upstream_of_or_within IMP (PMID:23364048) MGI PMID:23364048 NCBI chr11:121,036,969...121,039,140
Ensembl chr11:121,036,969...121,039,145 		JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within IMP (PMID:9331331) MGI PMID:9331331 NCBI chr 7:142,520,559...142,523,001
Ensembl chr 7:142,520,566...142,523,001 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within IMP (PMID:17961533) MGI PMID:17961533 NCBI chr 4:127,248,600...127,251,957
Ensembl chr 4:127,248,602...127,251,974 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IMP (PMID:24855001) MGI PMID:24855001 NCBI chr12:51,790,504...51,876,540
Ensembl chr12:51,790,505...51,876,319 		JBrowse link
G Lif leukemia inhibitory factor acts_upstream_of_or_within IGI (PMID:16258063) MGI PMID:16258063 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Xist inactive X specific transcripts acts_upstream_of_or_within IMP (PMID:22573614) MGI PMID:22573614 NCBI chr  X:102,503,979...102,526,839
Ensembl chr  X:102,503,972...102,526,860 		JBrowse link
spongiotrophoblast layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within IMP (PMID:16981008) MGI PMID:16981008 NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:12917334) UniProt PMID:12917334 NCBI chr 7:142,520,559...142,523,001
Ensembl chr 7:142,520,566...142,523,001 		JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within IMP (PMID:15485903) MGI PMID:15485903 NCBI chr17:74,835,247...75,010,351
Ensembl chr17:74,835,290...75,010,351 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within IMP (PMID:14673158) MGI PMID:14673158 NCBI chr  X:101,290,984...101,295,787
Ensembl chr  X:101,290,987...101,295,787 		JBrowse link
G Fbxw8 F-box and WD-40 domain protein 8 acts_upstream_of_or_within IMP (PMID:16880526) MGI PMID:16880526 NCBI chr 5:118,203,046...118,293,523
Ensembl chr 5:118,203,030...118,293,529 		JBrowse link
G Senp2 SUMO/sentrin specific peptidase 2 acts_upstream_of_or_within IMP (PMID:19090619) MGI PMID:19090619 NCBI chr16:21,828,182...21,868,019
Ensembl chr16:21,828,234...21,868,019 		JBrowse link
G Zfat zinc finger and AT hook domain containing acts_upstream_of_or_within IMP (PMID:20660741) MGI PMID:20660741 NCBI chr15:67,955,563...68,130,771
Ensembl chr15:67,955,613...68,130,705 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within IMP (PMID:15226444) MGI PMID:15226444 NCBI chr12:80,154,534...80,159,787
Ensembl chr12:80,154,528...80,159,787 		JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placental specific protein 1 acts_upstream_of_or_within IMP (PMID:22729990) MGI PMID:22729990 NCBI chr  X:52,158,870...52,328,969
Ensembl chr  X:52,158,872...52,328,988 		JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within IMP (PMID:21972064) MGI PMID:21972064 NCBI chr 5:29,940,896...29,991,476
Ensembl chr 5:29,940,686...30,023,132 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within IMP (PMID:23610556) MGI PMID:23610556 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cts7 cathepsin 7 acts_upstream_of_or_within IMP (PMID:18776147) MGI PMID:18776147 NCBI chr13:61,500,275...61,506,010
Ensembl chr13:61,500,275...61,506,011 		JBrowse link
G Cts8 cathepsin 8 acts_upstream_of_or_within IMP (PMID:18776147) MGI PMID:18776147 NCBI chr13:61,394,561...61,403,162
Ensembl chr13:61,394,559...61,403,172 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in IMP (MGI:5449497|PMID:23064266) UniProt PMID:23064266 MGI:5449497 NCBI chr10:110,580,799...110,623,245
Ensembl chr10:110,581,300...110,623,245 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in IMP (MGI:5449497|PMID:23064266) UniProt PMID:23064266 MGI:5449497 NCBI chr 7:48,516,177...48,531,821
Ensembl chr 7:48,516,177...48,531,344 		JBrowse link
G Elf5 E74-like factor 5 acts_upstream_of IMP (PMID:24859262) MGI PMID:24859262 NCBI chr 2:103,242,443...103,281,334
Ensembl chr 2:103,242,033...103,281,334 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within IMP (PMID:17502352) MGI PMID:17502352 NCBI chr 7:24,941,985...24,950,522
Ensembl chr 7:24,941,986...24,950,186 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within IMP (PMID:24866916) MGI PMID:24866916 NCBI chr 4:127,248,600...127,251,957
Ensembl chr 4:127,248,602...127,251,974 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IMP
IDA		 (MGI:3625684|PMID:16759287), (MGI:4359361|PMID:17891141), (MGI:7484271|PMID:10611232)
(PMID:23911935)		 UniProt
MGI		 PMID:10611232 PMID:16759287 PMID:17891141 PMID:23911935 MGI:3625684 MGI:4359361 MGI:7484271 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IMP (PMID:24855001) MGI PMID:24855001 NCBI chr12:51,790,504...51,876,540
Ensembl chr12:51,790,505...51,876,319 		JBrowse link
G Itgav integrin alpha V involved_in TAS (MGI:4360451|PMID:19228596) BHF-UCL PMID:19228596 MGI:4360451 NCBI chr 2:83,554,796...83,637,261
Ensembl chr 2:83,554,741...83,637,260 		JBrowse link
G Lif leukemia inhibitory factor acts_upstream_of_or_within IGI (PMID:16258063) MGI PMID:16258063 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within IMP (PMID:9799236) MGI PMID:9799236 NCBI chr17:48,126,253...48,145,616
Ensembl chr17:48,126,253...48,145,616 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within IMP (PMID:17404209) MGI PMID:17404209 NCBI chr 7:70,001,694...70,016,494
Ensembl chr 7:70,001,692...70,016,483 		JBrowse link
G Palld palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chr 8:61,964,465...62,355,741
Ensembl chr 8:61,964,467...62,355,724 		JBrowse link
G Plg plasminogen acts_upstream_of_or_within IMP (PMID:12900459) MGI PMID:12900459 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272 		JBrowse link
G Plk4 polo like kinase 4 involved_in IMP (MGI:4359361|PMID:17891141) UniProt PMID:17891141 MGI:4359361 NCBI chr 3:40,754,463...40,771,318
Ensembl chr 3:40,754,454...40,771,318 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain acts_upstream_of_or_within IMP (PMID:22987638) MGI PMID:22987638 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Senp2 SUMO/sentrin specific peptidase 2 acts_upstream_of_or_within IMP (PMID:19090619) MGI PMID:19090619 NCBI chr16:21,828,182...21,868,019
Ensembl chr16:21,828,234...21,868,019 		JBrowse link
G Snai1 snail family zinc finger 1 acts_upstream_of_or_within IDA (PMID:9676199) MGI PMID:9676199 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734 		JBrowse link
G Sox15 SRY (sex determining region Y)-box 15 involved_in IMP (MGI:3625684|PMID:16759287) UniProt PMID:16759287 MGI:3625684 NCBI chr11:69,545,863...69,547,553
Ensembl chr11:69,546,140...69,547,553 		JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase receptor type Q acts_upstream_of_or_within IMP (PMID:22357859) MGI PMID:22357859 NCBI chr10:107,350,224...107,555,939
Ensembl chr10:107,352,910...107,555,912 		JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 (I-isoform) involved_in IMP (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chr 9:95,634,695...95,727,359
Ensembl chr 9:95,634,695...95,727,364 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    multicellular organismal process 8901
      multicellular organism development 5426
        embryo development 1382
          embryonic organ development 565
            embryonic brain development 33
            embryonic camera-type eye development + 42
            embryonic digestive tract development + 37
            embryonic heart tube development + 94
            embryonic hemopoiesis + 32
            embryonic liver development 6
            embryonic lung development 4
            embryonic organ morphogenesis + 340
            embryonic placenta development + 120
            hypochord development 0
            labyrinthine layer blood vessel development 27
            notochord development + 25
Path 2
Term Annotations click to browse term
  biological_process 28573
    developmental process 7363
      anatomical structure development 6834
        multicellular organism development 5426
          embryo development 1382
            embryonic organ development 565
              embryonic brain development 33
              embryonic camera-type eye development + 42
              embryonic digestive tract development + 37
              embryonic heart tube development + 94
              embryonic hemopoiesis + 32
              embryonic liver development 6
              embryonic lung development 4
              embryonic organ morphogenesis + 340
              embryonic placenta development + 120
              hypochord development 0
              labyrinthine layer blood vessel development 27
              notochord development + 25
paths to the root