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ONTOLOGY REPORT - ANNOTATIONS


Term:digestive tract morphogenesis
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Accession:GO:0048546 term browser browse the term
Definition:The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.
Synonyms:exact_synonym: alimentary canal morphogenesis;   digestive tube morphogenesis;   gastrointestinal tract morphogenesis
 narrow_synonym: intestinal morphogenesis
 broad_synonym: gut morphogenesis
 alt_id: GO:0048547


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digestive tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member ISO (MGI:MGI:5634869|PMID:25666625) RGD PMID:25666625 MGI:MGI:5634869 NCBI chr 6:55,465,782...55,487,087
Ensembl chr 6:55,465,782...55,487,714
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:2158305 (MGI:MGI:70264|PMID:7812968)
GO_REF:0000107
RGD
Ensembl
PMID:7812968 GO_REF:0000107, MGI:MGI:70264 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 ISO MGI:MGI:2179530 (MGI:MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:MGI:1346729 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024
JBrowse link
G Egfr epidermal growth factor receptor ISO MGI:MGI:1856402 (MGI:MGI:74263|PMID:7618084) RGD PMID:7618084 MGI:MGI:74263 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Ephb3 Eph receptor B3 ISO (MGI:MGI:2388849|PMID:12408869) RGD PMID:12408869 MGI:MGI:2388849 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:MGI:1931521 (MGI:MGI:4352984|PMID:19407216) RGD PMID:19407216 MGI:MGI:4352984 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO
IEA
MGI:MGI:2384429 (MGI:MGI:4830408|PMID:20808783)
GO_REF:0000107
RGD
Ensembl
PMID:20808783 GO_REF:0000107, MGI:MGI:4830408 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:21088234 RGD:4889157 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:MGI:2158732 (MGI:MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Percc1 proline and glutamate rich with coiled coil 1 ISO (MGI:MGI:6368375|PMID:31217582) RGD PMID:31217582 MGI:MGI:6368375 NCBI chr10:14,529,231...14,531,682 JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:2135272 (MGI:MGI:3839161|PMID:19300477)
GO_REF:0000107
RGD
Ensembl
PMID:19300477 GO_REF:0000107, MGI:MGI:3839161 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:1860298|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
G Shh sonic hedgehog signaling molecule ISO MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532) RGD PMID:9731532 MGI:MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox10 SRY-box transcription factor 10 ISO MGI:MGI:1857401|MGI:MGI:3511472|MGI:MGI:3511473|MGI:MGI:3511474|MGI:MGI:3511476 (MGI:MGI:3699432|PMID:15843399), (MGI:MGI:56157|PMID:6512238) RGD PMID:6512238, PMID:15843399 MGI:MGI:3699432, MGI:MGI:56157 NCBI chr 7:120,393,238...120,403,523
Ensembl chr 7:120,393,254...120,403,523
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Stx2 syntaxin 2 IMP RGD PMID:12464668 RGD:1298909 NCBI chr12:31,324,203...31,360,249
Ensembl chr12:31,335,372...31,360,254
JBrowse link
G Tp73 tumor protein p73 ISO MGI:MGI:1859911 (MGI:MGI:1354064|PMID:10716451) RGD PMID:10716451 MGI:MGI:1354064 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:892014 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:MGI:1857617 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
cloaca development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO
ISS
UniProtKB:F8W3V6 (MGI:MGI:5306539|PMID:21959375)
GO_REF:0000024
RGD
UniProt
PMID:21959375 GO_REF:0000024, MGI:MGI:5306539 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link
cloacal septation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Tp63 tumor protein p63 ISO MGI:MGI:1934269 (MGI:MGI:2387879|PMID:12368184) RGD PMID:12368184 MGI:MGI:2387879 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Wnt11 Wnt family member 11 ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
embryonic digestive tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647|MGI:MGI:1927833 (MGI:MGI:3040447|PMID:15017552), (MGI:MGI:3722952|PMID:16618415) RGD PMID:15017552, PMID:16618415 MGI:MGI:3040447, MGI:MGI:3722952 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153811|MGI:MGI:2183527 (MGI:MGI:3722952|PMID:16618415), (MGI:MGI:5285062|PMID:21550054), (MGI:MGI:5317412|PMID:21492869) RGD PMID:16618415, PMID:21492869, PMID:21550054 MGI:MGI:3722952, MGI:MGI:5285062, MGI:MGI:5317412 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxf1 forkhead box F1 ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Gata4 GATA binding protein 4 ISO MGI:MGI:2386764 (MGI:MGI:3590399|PMID:16127717) RGD PMID:16127717 MGI:MGI:3590399 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:3608164|PMID:16247775) RGD PMID:16247775 MGI:MGI:3608164 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hlx H2.0-like homeobox ISO MGI:MGI:2182089 (MGI:MGI:79044|PMID:8557196) RGD PMID:8557196 MGI:MGI:79044 NCBI chr13:102,637,967...102,643,376
Ensembl chr13:102,637,769...102,643,223
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:3807614|PMID:18635606) RGD PMID:18635606 MGI:MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO
ISS
(MGI:MGI:4399020|PMID:16888283)
GO_REF:0000024
RGD
UniProt
PMID:16888283 GO_REF:0000024, MGI:MGI:4399020 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:MGI:1934258 (MGI:MGI:1858523|PMID:10821773) RGD PMID:10821773 MGI:MGI:1858523 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:19242925), (PMID:8291537) RGD PMID:8291537, PMID:19242925 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO MGI:MGI:3522498 (MGI:MGI:3618450|PMID:16423343) RGD PMID:16423343 MGI:MGI:3618450 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:1860627|PMID:10903171)
Ensembl
UniProt
RGD
PMID:10903171 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1860627 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:MGI:3767234 (MGI:MGI:5285062|PMID:21550054) RGD PMID:21550054 MGI:MGI:5285062 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1934261 (MGI:MGI:1858523|PMID:10821773)
GO_REF:0000107
RGD
Ensembl
PMID:10821773 GO_REF:0000107, MGI:MGI:1858523 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Shox2 short stature homeobox 2 ISO MGI:MGI:3605739 (MGI:MGI:3604918|PMID:16141225) RGD PMID:16141225 MGI:MGI:3604918 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Six2 SIX homeobox 2 ISO (MGI:MGI:4365896|PMID:19660448) RGD PMID:19660448 MGI:MGI:4365896 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(MGI:MGI:3052265|PMID:15254231)
GO_REF:0000024
RGD
UniProt
PMID:15254231 GO_REF:0000024, MGI:MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Tcf21 transcription factor 21 IMP RGD PMID:11804032 RGD:727206 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Tcf7 transcription factor 7 ISO MGI:MGI:1202879 (MGI:MGI:3042541|PMID:15057272) RGD PMID:15057272 MGI:MGI:3042541 NCBI chr10:37,616,033...37,646,027
Ensembl chr10:37,617,279...37,645,802
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:MGI:98507 (MGI:MGI:3042541|PMID:15057272) RGD PMID:15057272 MGI:MGI:3042541 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
embryonic ectodermal digestive tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
embryonic foregut morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B ISO
IEA
MGI:MGI:1857709 (MGI:MGI:1861876|PMID:10921901)
GO_REF:0000107
RGD
Ensembl
PMID:10921901 GO_REF:0000107, MGI:MGI:1861876 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148567 (MGI:MGI:3820452|PMID:18692041)
GO_REF:0000107
RGD
Ensembl
PMID:18692041 GO_REF:0000107, MGI:MGI:3820452 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO MGI:MGI:3822451 (MGI:MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Foxf1 forkhead box F1 ISO MGI:MGI:1929432 (MGI:MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Foxp4 forkhead box P4 ISO MGI:MGI:3055161 (MGI:MGI:3054576|PMID:15361625) RGD PMID:15361625 MGI:MGI:3054576 NCBI chr 9:15,068,378...15,124,962
Ensembl chr 9:15,068,399...15,125,318
JBrowse link
G Gata4 GATA binding protein 4 ISO MGI:MGI:2179443|MGI:MGI:2386265 (MGI:MGI:87488|PMID:9136932), (MGI:MGI:87489|PMID:9136933) RGD PMID:9136932, PMID:9136933 MGI:MGI:87488, MGI:MGI:87489 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Nckap1 NCK-associated protein 1 ISO MGI:MGI:3578145 (MGI:MGI:3701029|PMID:16831833) RGD PMID:16831833 MGI:MGI:3701029 NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532)
GO_REF:0000107
RGD
Ensembl
PMID:9731532 GO_REF:0000107, MGI:MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad2 SMAD family member 2 ISO MGI:MGI:1201674 (MGI:MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:MGI:3618021 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:MGI:108051 (MGI:MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO MGI:MGI:2179440|MGI:MGI:3717118|MGI:MGI:4356113 (MGI:MGI:4355651|PMID:19619492), (MGI:MGI:4415813|PMID:18462699), (MGI:MGI:4946573|PMID:21305474) RGD PMID:18462699, PMID:19619492, PMID:21305474 MGI:MGI:4355651, MGI:MGI:4415813, MGI:MGI:4946573 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
embryonic hindgut morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact1 dishevelled-binding antagonist of beta-catenin 1 ISO (MGI:MGI:4457465|PMID:20145239) RGD PMID:20145239 MGI:MGI:4457465 NCBI chr 6:93,740,440...93,751,003
Ensembl chr 6:93,740,586...93,749,809
JBrowse link
G Hoxa13 homeo box A13 IMP RGD PMID:17161201 RGD:1599527 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Hoxd13 homeo box D13 IMP RGD PMID:17161201 RGD:1599527 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
G Tcf7 transcription factor 7 ISO MGI:MGI:1202879 (MGI:MGI:3042541|PMID:15057272) RGD PMID:15057272 MGI:MGI:3042541 NCBI chr10:37,616,033...37,646,027
Ensembl chr10:37,617,279...37,645,802
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:MGI:98507 (MGI:MGI:3042541|PMID:15057272) RGD PMID:15057272 MGI:MGI:3042541 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
endodermal digestive tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2183527 (MGI:MGI:5285062|PMID:21550054) RGD PMID:21550054 MGI:MGI:5285062 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO
ISS
(PMID:16888283)
GO_REF:0000024
RGD
UniProt
PMID:16888283 GO_REF:0000024 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:MGI:3767234 (MGI:MGI:5285062|PMID:21550054) RGD PMID:21550054 MGI:MGI:5285062 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4946573|PMID:21305474) RGD PMID:21305474 MGI:MGI:4946573 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
foregut morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO MGI:MGI:2684314|MGI:MGI:2684317 (MGI:MGI:3603059|PMID:16107537) RGD PMID:16107537 MGI:MGI:3603059 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
hindgut morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:1857509|MGI:MGI:95729 (MGI:MGI:2148409|PMID:11485934) RGD PMID:11485934 MGI:MGI:2148409 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:95728 (MGI:MGI:2148409|PMID:11485934) RGD PMID:11485934 MGI:MGI:2148409 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1857796 (MGI:MGI:2148409|PMID:11485934)
GO_REF:0000107
RGD
Ensembl
PMID:11485934 GO_REF:0000107, MGI:MGI:2148409 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:3822053|PMID:18804104)
GO_REF:0000107
RGD
Ensembl
PMID:18804104 GO_REF:0000107, MGI:MGI:3822053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of Wnt signaling pathway involved in digestive tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp5 secreted frizzled-related protein 5 ISO (PMID:18981481) RGD PMID:18981481 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
post-embryonic digestive tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-3 NK2 homeobox 3 ISO MGI:MGI:2448069 (MGI:MGI:1888604|PMID:10926756) RGD PMID:10926756 MGI:MGI:1888604 NCBI chr 1:263,361,238...263,371,043
Ensembl chr 1:263,367,266...263,370,219
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Term paths to the root
Path 1
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  biological_process 20014
    developmental process 6812
      anatomical structure morphogenesis 2872
        tube morphogenesis 932
          digestive tract morphogenesis 57
            Wnt signaling pathway involved in digestive tract morphogenesis + 1
            cloaca development + 4
            ectodermal digestive tract morphogenesis + 1
            embryonic digestive tract morphogenesis + 20
            endodermal digestive tract morphogenesis 4
            foregut morphogenesis + 12
            hindgut morphogenesis + 9
            post-embryonic digestive tract morphogenesis + 1
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            digestive system development 179
              digestive tract development 164
                digestive tract morphogenesis 57
                  Wnt signaling pathway involved in digestive tract morphogenesis + 1
                  cloaca development + 4
                  ectodermal digestive tract morphogenesis + 1
                  embryonic digestive tract morphogenesis + 20
                  endodermal digestive tract morphogenesis 4
                  foregut morphogenesis + 12
                  hindgut morphogenesis + 9
                  post-embryonic digestive tract morphogenesis + 1
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.