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ONTOLOGY REPORT - ANNOTATIONS


Term:mucosa-associated lymphoid tissue development
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Accession:GO:0048537 term browser browse the term
Definition:The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.
Synonyms:exact_synonym: mucosal-associated lymphoid tissue development
 narrow_synonym: BALT development;   GALT development;   NALT development;   bronchial-associated lymphoid tissue development;   gut-associated lymphoid tissue development;   nasopharyngeal-associated lymphoid tissue development



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mucosa-associated lymphoid tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (PMID:10926756) RGD PMID:10926756 NCBI chr 1:252,427,356...252,430,309
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
G Rorc RAR-related orphan receptor C acts_upstream_of_or_within ISO MGI:3026635 (PMID:15247480) RGD PMID:15247480 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
Peyer's patch development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:10720488)
Ensembl
RGD
PMID:10720488 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO MGI:1856936 (PMID:5037658) RGD PMID:5037658 NCBI chr 3:57,315,900...57,578,271
Ensembl chr 3:36,910,427...37,168,944
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:98510 (PMID:17452521) RGD PMID:17452521 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158738 (PMID:7923373) RGD PMID:7923373 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2386680 (PMID:10790368) RGD PMID:10790368 NCBI chr 1:252,427,356...252,430,309
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (PMID:14691482) RGD PMID:14691482 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103036 (PMID:15294943)
Ensembl
RGD
PMID:15294943 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668
JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO MGI:98510 (PMID:17452521) RGD PMID:17452521 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tox thymocyte selection-associated high mobility group box acts_upstream_of_or_within ISO MGI:3773716 (PMID:20818394) RGD PMID:20818394 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
JBrowse link
Peyer's patch morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Artn artemin involved_in ISO (PMID:17322904) RGD PMID:17322904 NCBI chr 5:131,458,596...131,470,193
Ensembl chr 5:131,464,756...131,468,025
JBrowse link
G Foxl1 forkhead box L1 acts_upstream_of_or_within ISO MGI:2180191 (PMID:12648490) RGD PMID:12648490 NCBI chr19:66,105,953...66,109,366
Ensembl chr19:49,197,400...49,198,425
JBrowse link
G Ret ret proto-oncogene involved_in ISO (PMID:17322904) RGD PMID:17322904 NCBI chr 4:152,998,344...153,040,556
Ensembl chr 4:151,326,431...151,368,176
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    developmental process 7109
      anatomical structure development 6611
        tissue development 2314
          mucosa-associated lymphoid tissue development 13
            Peyer's patch development + 13
Path 2
Term Annotations click to browse term
  biological_process 20536
    developmental process 7109
      anatomical structure development 6611
        multicellular organism development 5330
          system development 4612
            immune system development 240
              hematopoietic or lymphoid organ development 131
                mucosa-associated lymphoid tissue development 13
                  Peyer's patch development + 13
paths to the root