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ONTOLOGY REPORT - ANNOTATIONS

Term:circadian behavior
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Accession:GO:0048512 term browser browse the term
Definition:The specific behavior of an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian rhythm behavior


show annotations for term's descendants           Sort by:
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22678064) Ensembl
MGI
TreeGrafter		 PMID:22678064 GO_REF:0000107 GO_REF:0000118 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017 		JBrowse link
G CSNK1E casein kinase 1 epsilon ISO RGD PMID:17502429 RGD:10395242 NCBI chr10:26,386,646...26,412,429
Ensembl chr10:26,393,033...26,411,624 		JBrowse link
G GPR157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,453,338...62,471,614
Ensembl chr 5:62,454,921...62,508,970 		JBrowse link
G GPR176 G protein-coupled receptor 176 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:6,990,463...7,120,361
Ensembl chr30:6,992,849...7,119,992 		JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:19,758,907...19,787,725
Ensembl chr23:19,762,052...19,787,614 		JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chr 6:36,618,670...36,624,533
Ensembl chr 6:36,491,561...36,624,532 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:21525287) MGI PMID:21525287 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G TP53 tumor protein p53 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291 		JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr24:23,410,553...23,423,494
Ensembl chr24:23,411,140...23,419,767 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:30498428) MGI PMID:30498428 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G NLGN3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:22,517,482...22,623,358
Ensembl chr12:22,517,482...22,623,358 		JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22678064) Ensembl
MGI		 PMID:22678064 GO_REF:0000107 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017 		JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12419540) MGI PMID:12419540 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764 		JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26131556) Ensembl
MGI		 PMID:26131556 GO_REF:0000107 NCBI chr 9:31,093,638...31,364,315
Ensembl chr 9:31,055,348...31,386,790 		JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:59,524,715...59,529,535
Ensembl chr17:59,525,987...59,529,402 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575 		JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within		 ISA
ISO		 (PMID:8973172)
(PMID:16845385)		 AgBase
MGI		 PMID:8973172 PMID:16845385 NCBI chr 4:26,844,250...27,338,271
Ensembl chr 4:26,844,250...27,555,776 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr10:54,954,852...54,957,116 JBrowse link
G LOC607881 potassium voltage-gated channel subfamily D member 2-like involved_in ISO (MGI:5432624|PMID:22815518) UniProt PMID:22815518 MGI:5432624
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr32:9,584,437...9,889,118
Ensembl chr32:9,575,492...9,884,325 		JBrowse link
G MC3R melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:41,492,371...41,494,033
Ensembl chr24:41,492,371...41,494,033 		JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NMS neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr10:42,260,542...42,310,397
Ensembl chr10:42,260,540...42,274,613 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G TEDC1 tubulin epsilon and delta complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,787,754...72,795,593
Ensembl chr 8:72,788,592...72,795,326 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160 		JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) BHF-UCL PMID:18329818 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709 		JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712 		JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753 		JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) BHF-UCL PMID:18329818 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510 		JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498 		JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr15:52,790,136...52,797,785
Ensembl chr15:52,794,671...52,795,818 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712 		JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr15:41,036,428...41,037,571
Ensembl chr15:41,036,428...41,037,553 		JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177 		JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr28:36,488,430...36,492,524
Ensembl chr28:36,488,500...36,492,090 		JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519 		JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,405,453...41,415,727
Ensembl chr 6:41,407,070...41,408,823 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160 		JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684 		JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr11:20,342,880...20,346,959
Ensembl chr11:20,344,648...20,346,959 		JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:14,129,978...14,192,016
Ensembl chr34:14,130,017...14,191,370 		JBrowse link
G LOC611347 uncharacterized LOC611347 involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr13:47,865,037...48,047,697
Ensembl chr13:47,865,002...47,893,921 		JBrowse link
G PER3 period circadian regulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499 		JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242 		JBrowse link
G PTGDS prostaglandin D2 synthase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:48,647,334...48,650,608
Ensembl chr 9:48,646,255...48,669,814 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in IMP (PMID:11282968) UniProt PMID:11282968 NCBI chr12:22,517,482...22,623,358
Ensembl chr12:22,517,482...22,623,358 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358 		JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chr24:47,530,039...47,537,477
Ensembl chr24:47,508,136...47,537,250 		JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr 5:78,450,963...78,635,615
Ensembl chr 5:78,455,005...78,610,033 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    rhythmic process 404
      circadian rhythm 273
        circadian behavior 67
          circadian mating behavior 0
          circadian sleep/wake cycle + 40
          circadian sleep/wake cycle process + 33
          eclosion rhythm 0
          locomotor rhythm + 22
Path 2
Term Annotations click to browse term
  biological_process 17917
    multicellular organismal process 8083
      behavior 843
        rhythmic behavior 70
          circadian behavior 67
            circadian mating behavior 0
            circadian sleep/wake cycle + 40
            circadian sleep/wake cycle process + 33
            eclosion rhythm 0
            locomotor rhythm + 22
paths to the root