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ONTOLOGY REPORT - ANNOTATIONS

Term:rhythmic process
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Accession:GO:0048511 term browser browse the term
Definition:Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.
Synonyms:related_synonym: rhythm
 only_in_taxon: NCBITaxon:131567 ! cellular organisms

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
rhythmic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936594:1,556,303...1,559,198
Ensembl chrNW_004936594:1,556,285...1,559,400 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588 		JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936538:2,411,194...2,415,106
Ensembl chrNW_004936538:2,413,967...2,414,890 		JBrowse link
G Clock clock circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Crebbp CREB binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Dbp D-box binding PAR bZIP transcription factor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936664:2,676,754...2,682,425
Ensembl chrNW_004936664:2,676,754...2,682,425 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936541:5,005,211...5,013,439
Ensembl chrNW_004936541:5,004,692...5,013,350 		JBrowse link
G Dnm1l dynamin 1 like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554 		JBrowse link
G Egr1 early growth response 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004936669:814,330...838,881
Ensembl chrNW_004936669:814,330...839,208 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664 		JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004936524:9,720,777...9,884,984
Ensembl chrNW_004936524:9,720,767...9,885,120 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Hes7 hes family bHLH transcription factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641270)
(PMID:15170214)		 Ensembl
MGI		 PMID:11641270 PMID:15170214 GO_REF:0000107 NCBI chrNW_004936595:1,352,621...1,355,177
Ensembl chrNW_004936595:1,352,621...1,356,113 		JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:7,273,051...7,324,681
Ensembl chrNW_004936490:7,273,112...7,324,687 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936474:8,758,098...8,759,684
Ensembl chrNW_004936474:8,758,030...8,759,823 		JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936501:10,932,541...10,955,772
Ensembl chrNW_004936501:10,933,671...10,951,707 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936540:5,752,319...5,846,074
Ensembl chrNW_004936540:5,752,197...5,845,159 		JBrowse link
G LOC101969407 nicotinamide phosphoribosyltransferase-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936578:5,730,169...5,731,985 JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936896:228,908...539,836
Ensembl chrNW_004936896:230,494...540,071 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936739:551,678...602,027
Ensembl chrNW_004936739:551,629...602,047 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936796:367,461...369,469
Ensembl chrNW_004936796:367,759...369,150 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Per1 period circadian regulator 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170 		JBrowse link
G Per2 period circadian regulator 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295 		JBrowse link
G Per3 period circadian regulator 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936758:1,115,980...1,132,225
Ensembl chrNW_004936758:1,116,056...1,213,442 		JBrowse link
G Tef TEF transcription factor, PAR bZIP family member involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:505,978...528,087
Ensembl chrNW_004936492:505,906...528,384 		JBrowse link
G Timeless timeless circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837 		JBrowse link
G Top1 DNA topoisomerase I involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978 		JBrowse link
G Tp53 tumor protein p53 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925 		JBrowse link
antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccne1 cyclin E1 ISO RGD PMID:17084963 RGD:2289278 NCBI chrNW_004936570:5,536,817...5,547,880
Ensembl chrNW_004936570:5,536,672...5,548,008 		JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:16846505 RGD:1600848 NCBI chrNW_004936728:653,654...702,433
Ensembl chrNW_004936728:654,638...700,213 		JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10976058) Ensembl
MGI		 PMID:10976058 GO_REF:0000107 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171 		JBrowse link
G Foxo3 forkhead box O3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14978268) Ensembl
MGI		 PMID:14978268 GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837 		JBrowse link
G Gas2 growth arrest specific 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27734842) Ensembl
MGI		 PMID:27734842 GO_REF:0000107 NCBI chrNW_004936654:3,326,557...3,448,930
Ensembl chrNW_004936654:3,326,511...3,448,872 		JBrowse link
G Gpr149 G protein-coupled receptor 149 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19887567) Ensembl
MGI		 PMID:19887567 GO_REF:0000107 NCBI chrNW_004936519:1,997,492...2,070,157
Ensembl chrNW_004936519:1,998,086...2,070,481 		JBrowse link
G Scaper S-phase cyclin A associated protein in the ER involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32510560) Ensembl
MGI		 PMID:32510560 GO_REF:0000107 NCBI chrNW_004936471:35,414,507...35,834,438
Ensembl chrNW_004936471:35,416,571...35,835,048 		JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004936505:5,544,011...6,747,417
Ensembl chrNW_004936505:5,548,164...6,094,225 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
G Slit3 slit guidance ligand 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936622:191,165...756,552
Ensembl chrNW_004936622:565,346...752,299 		JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22678064) MGI
Ensembl
TreeGrafter		 PMID:22678064 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:20,953,377...21,351,925
Ensembl chrNW_004936476:20,953,347...21,351,255 		JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,264,409...3,281,857
Ensembl chrNW_004936623:3,264,403...3,281,931 		JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,298,247...3,413,093
Ensembl chrNW_004936471:3,298,139...3,413,095 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (PMID:29723273) UniProt PMID:29723273 NCBI chrNW_004936473:15,624,597...15,646,875 JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:38172607) Ensembl
MGI		 PMID:38172607 GO_REF:0000107 NCBI chrNW_004936530:4,756,069...4,761,484
Ensembl chrNW_004936530:4,753,751...4,761,695 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:21525287) MGI PMID:21525287 NCBI chrNW_004936508:7,103,578...7,106,588
Ensembl chrNW_004936508:7,104,066...7,107,597 		JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925 		JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:20106950) UniProt PMID:20106950 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588 		JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996 		JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032 		JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO (PMID:18411297) BHF-UCL PMID:18411297 NCBI chrNW_004936548:1,306,939...1,314,678 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:181,793...241,050
Ensembl chrNW_004936548:182,075...225,856 		JBrowse link
G Cartpt CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chrNW_004936549:4,717,337...4,719,523
Ensembl chrNW_004936549:4,717,771...4,719,395 		JBrowse link
G Cavin3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:387,320...388,877
Ensembl chrNW_004936842:387,551...388,882 		JBrowse link
G Ciart circadian associated repressor of transcription involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936580:566,745...571,160 JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (PMID:23443664) UniProt PMID:23443664 NCBI chrNW_004936574:3,478,969...3,546,738
Ensembl chrNW_004936574:3,479,060...3,548,951 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (PMID:19414593), (PMID:21930935) UniProt PMID:19414593 PMID:21930935 NCBI chrNW_004936594:5,720,887...5,743,206
Ensembl chrNW_004936594:5,724,406...5,743,180 		JBrowse link
G Drd2 dopamine receptor D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16606840) Ensembl
MGI		 PMID:16606840 GO_REF:0000107 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:15878801) MGI PMID:15878801 NCBI chrNW_004936536:1,580,732...1,616,726
Ensembl chrNW_004936536:1,580,732...1,616,725 		JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,603,256...13,665,298
Ensembl chrNW_004936491:13,603,256...13,665,275 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:15226430) UniProt PMID:15226430 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19037247) Ensembl
MGI		 PMID:19037247 GO_REF:0000107 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:478,978...622,818
Ensembl chrNW_004936751:478,300...622,820 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:18,610,721...18,611,889
Ensembl chrNW_004936485:18,610,665...18,612,059 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:8,758,098...8,759,684
Ensembl chrNW_004936474:8,758,030...8,759,823 		JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chrNW_004937231:62,629...63,442 JBrowse link
G Kdm2a lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623 		JBrowse link
G Kdm5a lysine demethylase 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:486,424...570,546
Ensembl chrNW_004936606:485,655...570,739 		JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:10,932,541...10,955,772
Ensembl chrNW_004936501:10,933,671...10,951,707 		JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:5,752,319...5,846,074
Ensembl chrNW_004936540:5,752,197...5,845,159 		JBrowse link
G LOC101967743 casein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,904,622...2,925,904
Ensembl chrNW_004936492:2,907,015...2,928,418 		JBrowse link
G LOC101969407 nicotinamide phosphoribosyltransferase-like involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936578:5,730,169...5,731,985 JBrowse link
G LOC101976473 RNA-binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,960,066...2,968,092
Ensembl chrNW_004936599:2,960,063...2,968,210 		JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936909:493,998...592,649
Ensembl chrNW_004936909:585,206...592,644 		JBrowse link
G Mc3r melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936875:172,764...174,446
Ensembl chrNW_004936875:172,862...173,830 		JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926 		JBrowse link
G Mybbp1a MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:1,095,022...1,108,545
Ensembl chrNW_004936677:1,095,420...1,108,496 		JBrowse link
G Mycbp2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:19037247) MGI PMID:19037247 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223 		JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263 		JBrowse link
G Noct nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,316,857...11,319,669
Ensembl chrNW_004936474:11,316,700...11,319,669 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936505:7,886,327...7,966,969
Ensembl chrNW_004936505:7,884,724...7,966,928 		JBrowse link
G Nudt12 nudix hydrolase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936523:964,858...979,118
Ensembl chrNW_004936523:964,813...979,250 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170 		JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295 		JBrowse link
G Per3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786 		JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chrNW_004936749:900,208...991,891 JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (PMID:23133559) UniProt PMID:23133559 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546 		JBrowse link
G Rai1 retinoic acid induced 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936741:1,332,353...1,408,116
Ensembl chrNW_004936741:1,332,339...1,406,628 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,934,951...2,945,753
Ensembl chrNW_004936599:2,935,397...2,945,345 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,569,603...1,596,831
Ensembl chrNW_004936706:1,569,756...1,596,456 		JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643 		JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (PMID:22753030), (PMID:23723244) UniProt PMID:22753030 PMID:23723244 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Top1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) UniProt PMID:26232227 NCBI chrNW_004936475:21,005,242...21,235,992
Ensembl chrNW_004936475:21,080,302...21,231,544 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31560728) Ensembl
MGI		 PMID:31560728 GO_REF:0000107 NCBI chrNW_004936490:15,029,447...15,038,046
Ensembl chrNW_004936490:15,029,562...15,037,756 		JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604 		JBrowse link
G LOC101976473 RNA-binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,960,066...2,968,092
Ensembl chrNW_004936599:2,960,063...2,968,210 		JBrowse link
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in ISO
IEA		 RGD
Ensembl
TreeGrafter		 PMID:16166080 PMID:18321474 GO_REF:0000107 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chrNW_004936594:1,556,303...1,559,198
Ensembl chrNW_004936594:1,556,285...1,559,400 		JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427 		JBrowse link
G Actb actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004936765:667,107...670,627
Ensembl chrNW_004936765:667,053...670,672 		JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chrNW_004936478:20,310,509...20,477,506
Ensembl chrNW_004936478:20,310,503...20,456,141 		JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chrNW_004936512:6,612,708...6,629,202
Ensembl chrNW_004936512:6,615,012...6,629,165 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004936578:3,168,599...3,179,369
Ensembl chrNW_004936578:3,168,331...3,171,928 		JBrowse link
G Agrn agrin acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chrNW_004936737:2,010,647...2,041,401
Ensembl chrNW_004936737:2,011,724...2,039,796 		JBrowse link
G Agrp agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chrNW_004936475:17,927,991...17,929,377
Ensembl chrNW_004936475:17,927,985...17,937,147 		JBrowse link
G Ahr aryl hydrocarbon receptor ISO RGD PMID:9813174 RGD:405866391 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:9813174 RGD:405866391 NCBI chrNW_004936580:1,038,420...1,093,319
Ensembl chrNW_004936580:1,036,973...1,082,984 		JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,482,307...17,527,407
Ensembl chrNW_004936487:17,486,826...17,527,435 		JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996 		JBrowse link
G Atf5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,713,527...3,717,824
Ensembl chrNW_004936664:3,713,527...3,717,824 		JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:32272782 RGD:407571700 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12451142) Ensembl
MGI		 PMID:12451142 GO_REF:0000107 NCBI chrNW_004936521:10,038,345...10,039,345
Ensembl chrNW_004936521:10,038,765...10,039,223 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chrNW_004936706:476,473...494,659
Ensembl chrNW_004936706:477,107...495,525 		JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chrNW_004936565:4,694,294...4,763,661
Ensembl chrNW_004936565:4,694,281...4,763,773 		JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004936540:5,530,081...5,582,765
Ensembl chrNW_004936540:5,529,942...5,585,014 		JBrowse link
G Becn1 beclin 1 ISO RGD PMID:32272782 RGD:407571700 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032 		JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO (PMID:19786558)
PMID:12397359		 UniProt PMID:12397359 PMID:19786558 RGD:625726 NCBI chrNW_004936548:1,306,939...1,314,678 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:11163178), (PMID:26945058)
(PMID:17264215)
(PMID:31294688)
(PMID:14645221), (PMID:19217292), (PMID:19740747)
(PMID:12024206), (PMID:12150932), (PMID:12843397), (PMID:12897057)		 MGI
UniProt
RGD		 PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... RGD:10043346 RGD:67927 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10864977) MGI
Ensembl		 PMID:10864977 GO_REF:0000107 NCBI chrNW_004936548:181,793...241,050
Ensembl chrNW_004936548:182,075...225,856 		JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chrNW_004936543:2,984,797...2,986,563
Ensembl chrNW_004936543:2,984,996...2,985,625 		JBrowse link
G Clock clock circadian regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12897057)
(PMID:12024206), (PMID:8171325)		 MGI
Ensembl
RGD		 PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 GO_REF:0000107 RGD:10401879 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:26945058) MGI PMID:26945058 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21367864 GO_REF:0000107 RGD:7247438 NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892 		JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (PMID:23443664) UniProt PMID:23443664 NCBI chrNW_004936574:3,478,969...3,546,738
Ensembl chrNW_004936574:3,479,060...3,548,951 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17264215)
(PMID:12024206)
(PMID:12843397)		 MGI
Ensembl		 PMID:12024206 PMID:12843397 PMID:17264215 GO_REF:0000107 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12024206)
(PMID:17264215)		 MGI
Ensembl
RGD		 PMID:11804325 PMID:12024206 PMID:17264215 GO_REF:0000107 RGD:632584 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004936541:5,005,211...5,013,439
Ensembl chrNW_004936541:5,004,692...5,013,350 		JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004936481:6,896,487...6,934,938
Ensembl chrNW_004936481:6,896,359...6,935,623 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chrNW_004936888:468,334...471,254
Ensembl chrNW_004936888:468,403...471,205 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:5,317,109...5,423,593
Ensembl chrNW_004936500:5,316,164...5,404,353 		JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004936646:497,783...515,247
Ensembl chrNW_004936646:498,749...513,297 		JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chrNW_004936472:505,751...515,375
Ensembl chrNW_004936472:505,751...514,339 		JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179 		JBrowse link
G Gnrhr gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004936582:749,016...765,189
Ensembl chrNW_004936582:749,016...765,189 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:20123978) UniProt PMID:20123978 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936661:1,793,791...1,806,564
Ensembl chrNW_004936661:1,793,801...1,806,579 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936474:8,531,434...8,567,734
Ensembl chrNW_004936474:8,531,434...8,567,767 		JBrowse link
G Homer1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chrNW_004936549:7,189,588...7,320,117
Ensembl chrNW_004936549:7,188,850...7,320,312 		JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chrNW_004936501:7,645,007...7,729,313
Ensembl chrNW_004936501:7,644,619...7,729,323 		JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936601:3,569,626...3,626,782
Ensembl chrNW_004936601:3,569,544...3,626,797 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004936485:18,610,721...18,611,889
Ensembl chrNW_004936485:18,610,665...18,612,059 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292), (PMID:19740747) UniProt PMID:19217292 PMID:19740747 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,758,098...8,759,684
Ensembl chrNW_004936474:8,758,030...8,759,823 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:20685873) UniProt PMID:20685873 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:748,777...753,582
Ensembl chrNW_004936529:745,511...753,581 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chrNW_004936469:16,221,750...16,674,526
Ensembl chrNW_004936469:16,222,005...16,691,596 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:40,980,487...40,986,880
Ensembl chrNW_004936470:40,980,487...40,986,885 		JBrowse link
G Klf9 KLF transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:6,517,748...6,553,532
Ensembl chrNW_004936503:6,517,687...6,548,336 		JBrowse link
G Lep leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:5,752,319...5,846,074
Ensembl chrNW_004936540:5,752,197...5,845,159 		JBrowse link
G Lipc lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chrNW_004936471:19,604,083...19,733,721
Ensembl chrNW_004936471:19,703,236...19,733,686 		JBrowse link
G LOC101955077 cytochrome P450 7B1 ISO RGD PMID:12759897 RGD:1298869 NCBI chrNW_004936496:8,900,320...9,072,109
Ensembl chrNW_004936496:8,899,965...9,072,089 		JBrowse link
G LOC101960714 cone-rod homeobox protein ISO RGD PMID:9465110 RGD:1600977 NCBI chrNW_004936664:1,408,618...1,419,096
Ensembl chrNW_004936664:1,409,229...1,419,234 		JBrowse link
G LOC101969407 nicotinamide phosphoribosyltransferase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,730,169...5,731,985 JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24209618) UniProt PMID:24209618 NCBI chrNW_004936880:646,835...661,312
Ensembl chrNW_004936880:644,079...661,544 		JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chrNW_004936554:3,013,106...3,047,171
Ensembl chrNW_004936554:3,013,050...3,047,179 		JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,337,726...3,417,818
Ensembl chrNW_004936520:3,338,881...3,381,627 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISO
IEA		 RGD
Ensembl		 PMID:26547053 GO_REF:0000107 RGD:13781893 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:4,794,701...4,825,696
Ensembl chrNW_004936606:4,794,749...4,825,570 		JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936796:367,461...369,469
Ensembl chrNW_004936796:367,759...369,150 		JBrowse link
G Ngf nerve growth factor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004936627:635,784...641,290
Ensembl chrNW_004936627:635,788...645,364 		JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566 		JBrowse link
G Noct nocturnin involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928 		JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:14645221) UniProt PMID:14645221 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:11,316,857...11,319,669
Ensembl chrNW_004936474:11,316,700...11,319,669 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12150932) RGD
MGI
Ensembl		 PMID:12150932 PMID:24144766 GO_REF:0000107 RGD:10448984 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:7,886,327...7,966,969
Ensembl chrNW_004936505:7,884,724...7,966,928 		JBrowse link
G Nrxn1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:6,002,168...6,021,690
Ensembl chrNW_004936580:6,002,120...6,021,709 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004936483:13,912,904...14,291,881
Ensembl chrNW_004936483:13,909,109...14,291,887 		JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004936479:14,807,503...14,812,575
Ensembl chrNW_004936479:14,807,538...14,812,575 		JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chrNW_004936471:6,809,181...6,834,189
Ensembl chrNW_004936471:6,809,195...6,836,169 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISO
IEA		 RGD
Ensembl
UniProt		 PMID:11122332 PMID:12176169 GO_REF:0000107 GO_REF:0000117 RGD:1299576 RGD:631234 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170 		JBrowse link
G Per2 period circadian regulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12843397) RGD
MGI
UniProt		 PMID:9765215 PMID:9878515 PMID:12843397 GO_REF:0000117 RGD:10043346 RGD:61691 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295 		JBrowse link
G Per3 period circadian regulator 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12843397) Ensembl
MGI
UniProt		 PMID:12843397 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799 		JBrowse link
G Prf1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chrNW_004936521:8,057,874...8,060,695
Ensembl chrNW_004936521:8,057,874...8,060,695 		JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chrNW_004936749:900,208...991,891 JBrowse link
G Prl prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Prok2 prokineticin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12024206) Ensembl
MGI		 PMID:12024206 GO_REF:0000107 NCBI chrNW_004936603:3,299,736...3,419,539
Ensembl chrNW_004936603:3,299,736...3,310,011 		JBrowse link
G Prokr2 prokineticin receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12024206) Ensembl
MGI		 PMID:12024206 GO_REF:0000107 NCBI chrNW_004936485:13,620,000...13,632,134
Ensembl chrNW_004936485:13,619,835...13,632,881 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,934,951...2,945,753
Ensembl chrNW_004936599:2,935,397...2,945,345 		JBrowse link
G Rora RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643 		JBrowse link
G Rorb RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813 		JBrowse link
G Rorc RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004936473:28,010,123...28,102,124
Ensembl chrNW_004936473:28,010,123...28,102,124 		JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:28,162,528...28,248,474
Ensembl chrNW_004936473:28,162,528...28,248,474 		JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:13,063,971...13,153,030
Ensembl chrNW_004936469:13,064,043...13,152,974 		JBrowse link
G Setx senataxin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22767893) Ensembl
MGI		 PMID:22767893 GO_REF:0000107 NCBI chrNW_004936487:18,858,384...18,945,253
Ensembl chrNW_004936487:18,855,744...18,944,158 		JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004936712:1,614,979...1,621,207
Ensembl chrNW_004936712:1,614,979...1,622,466 		JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004936555:5,966,610...5,982,083
Ensembl chrNW_004936555:5,979,417...5,982,011 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chrNW_004936541:718,577...727,420
Ensembl chrNW_004936541:718,577...729,876 		JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chrNW_004936538:6,205,268...6,239,062
Ensembl chrNW_004936538:6,205,251...6,239,083 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chrNW_004936710:1,523,289...1,530,181
Ensembl chrNW_004936710:1,523,355...1,529,672 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:24413057) UniProt PMID:24413057 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:24413057) UniProt PMID:24413057 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936510:5,643,072...5,672,258
Ensembl chrNW_004936510:5,643,044...5,672,255 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,691,872...18,749,217
Ensembl chrNW_004936474:18,691,835...18,749,235 		JBrowse link
G Timeless timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837 		JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Top1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518 		JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chrNW_004936528:1,090,529...1,116,081
Ensembl chrNW_004936528:1,096,352...1,115,688 		JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chrNW_004936568:974,575...1,065,800
Ensembl chrNW_004936568:974,767...1,065,804 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chrNW_004936550:33,797...42,233
Ensembl chrNW_004936550:34,048...41,840 		JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30498428) Ensembl
MGI		 PMID:30498428 GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249
Ensembl chrNW_004936471:8,209,057...8,226,353 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995 		JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chrNW_004936762:435,729...458,261
Ensembl chrNW_004936762:435,729...458,423 		JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097 		JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:5,838,663...5,933,174
Ensembl chrNW_004936476:5,838,830...5,933,207 		JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22678064) Ensembl
MGI		 PMID:22678064 GO_REF:0000107 NCBI chrNW_004936476:20,953,377...21,351,925
Ensembl chrNW_004936476:20,953,347...21,351,255 		JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12419540) MGI PMID:12419540 NCBI chrNW_004936471:39,791,633...40,193,049
Ensembl chrNW_004936471:39,791,613...40,187,923 		JBrowse link
circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pln phospholamban involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:1,443,626...1,453,770
Ensembl chrNW_004936658:1,443,795...1,453,839 		JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207 		JBrowse link
cumulus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,092,675...5,099,344
Ensembl chrNW_004936525:5,092,635...5,099,331 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,779,398...3,798,074
Ensembl chrNW_004936524:3,779,392...3,798,501 		JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12451142) Ensembl
MGI		 PMID:12451142 GO_REF:0000107 NCBI chrNW_004936521:10,038,345...10,039,345
Ensembl chrNW_004936521:10,038,765...10,039,223 		JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936581:387,939...400,740
Ensembl chrNW_004936581:387,705...400,740 		JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Gna11 G protein subunit alpha 11 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936588:1,770,777...1,789,143
Ensembl chrNW_004936588:1,770,771...1,789,170 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292) MGI PMID:19217292 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20080691) Ensembl
MGI		 PMID:20080691 GO_REF:0000107 NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22920256) MGI
Ensembl		 PMID:22920256 GO_REF:0000107 NCBI chrNW_004936540:160,638...162,662
Ensembl chrNW_004936540:161,124...161,846 		JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,038,345...10,039,345
Ensembl chrNW_004936521:10,038,765...10,039,223 		JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032 		JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,551,621...2,625,327
Ensembl chrNW_004936596:2,551,506...2,625,327 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G LOC101973554 F-box/LRR-repeat protein 21 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936597:3,037,282...3,045,145 JBrowse link
G LOC101976473 RNA-binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,960,066...2,968,092
Ensembl chrNW_004936599:2,960,063...2,968,210 		JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926 		JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15741322) Ensembl
MGI		 PMID:15741322 GO_REF:0000107 NCBI chrNW_004936596:3,596,720...3,606,283
Ensembl chrNW_004936596:3,597,651...3,605,836 		JBrowse link
G Opn5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:12,740,038...12,766,310
Ensembl chrNW_004936476:12,722,563...12,766,512 		JBrowse link
G Pde6b phosphodiesterase 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,418,037...22,472,251
Ensembl chrNW_004936477:22,417,453...22,472,185 		JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170 		JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295 		JBrowse link
G Per3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (PMID:21712997) UniProt PMID:21712997 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,934,951...2,945,753
Ensembl chrNW_004936599:2,935,397...2,945,345 		JBrowse link
G Sik1 salt inducible kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:774,749...784,326
Ensembl chrNW_004936500:774,092...784,330 		JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925 		JBrowse link
estrous cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adnp activity dependent neuroprotector homeobox ISO RGD PMID:16023261 RGD:2312777 NCBI chrNW_004936514:3,855,113...3,883,036
Ensembl chrNW_004936514:3,855,672...3,885,718 		JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:7977723 RGD:8548523 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:18202528 RGD:2306318 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Anxa1 annexin A1 ISO RGD PMID:17283243 RGD:2306897 NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413 		JBrowse link
G Azin1 antizyme inhibitor 1 ISO RGD PMID:28315656 RGD:14700804 NCBI chrNW_004936470:40,801,943...40,832,543
Ensembl chrNW_004936470:40,801,943...40,834,003 		JBrowse link
G Ca12 carbonic anhydrase 12 ISO RGD PMID:23869188 RGD:155226878 NCBI chrNW_004936471:23,876,889...23,929,720
Ensembl chrNW_004936471:23,876,812...23,929,987 		JBrowse link
G Ca2 carbonic anhydrase 2 ISO RGD PMID:23869188 RGD:155226878 NCBI chrNW_004936544:362,591...379,151
Ensembl chrNW_004936544:362,591...380,223 		JBrowse link
G Cckbr cholecystokinin B receptor ISO RGD PMID:17045752 RGD:2311331 NCBI chrNW_004936842:329,551...341,491
Ensembl chrNW_004936842:329,376...341,808 		JBrowse link
G Clu clusterin ISO RGD PMID:11149574 RGD:9068389 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836 		JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:22122904 GO_REF:0000118 RGD:9685419 NCBI chrNW_004936470:26,994,549...27,099,758
Ensembl chrNW_004936470:26,994,215...27,100,999 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:11956173 RGD:2290010 NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956 		JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:11854469 RGD:8694160 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:18439600 RGD:2313729 NCBI chrNW_004936572:3,728,971...3,795,612
Ensembl chrNW_004936572:3,730,327...3,795,625 		JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:9075691 RGD:9685070 NCBI chrNW_004936757:1,282,185...1,285,804
Ensembl chrNW_004936757:1,282,185...1,285,832 		JBrowse link
G Has1 hyaluronan synthase 1 ISO RGD PMID:24218629 RGD:9588635 NCBI chrNW_004937026:125,622...132,141
Ensembl chrNW_004937026:125,881...135,235 		JBrowse link
G Has2 hyaluronan synthase 2 ISO RGD PMID:24218629 RGD:9588635 NCBI chrNW_004936470:25,418,069...25,443,332
Ensembl chrNW_004936470:25,418,063...25,444,634 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9990085 RGD:10059328 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:17567960 RGD:10046043 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925 		JBrowse link
G LOC101970101 cytochrome P450 1B1 ISO RGD PMID:12223220 RGD:7829740 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:22521590 RGD:401976465 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mdk midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,687,825...2,690,292
Ensembl chrNW_004936562:2,687,825...2,689,484 		JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:8691099 RGD:10043158 NCBI chrNW_004936551:5,040,084...5,050,384
Ensembl chrNW_004936551:5,040,084...5,050,384 		JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO RGD PMID:10070364 RGD:9685349 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
G Muc4 mucin 4, cell surface associated ISO RGD PMID:9618151 RGD:2303752 NCBI chrNW_004936784:515,608...539,915 JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:15862975 RGD:2306462 NCBI chrNW_004936493:7,368,393...7,605,754
Ensembl chrNW_004936493:7,368,462...7,465,615 		JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:15862975 RGD:2306462 NCBI chrNW_004936558:658,723...775,263
Ensembl chrNW_004936558:677,610...775,288 		JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chrNW_004936496:280,593...305,900
Ensembl chrNW_004936496:280,558...305,904 		JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:12710984 RGD:9835032 NCBI chrNW_004936514:11,264,392...11,273,584
Ensembl chrNW_004936514:11,258,335...11,273,592 		JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chrNW_004936489:6,506,207...6,567,136
Ensembl chrNW_004936489:6,506,207...6,548,946 		JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:12867731 RGD:2304182 NCBI chrNW_004936602:4,241,743...4,259,866
Ensembl chrNW_004936602:4,241,737...4,260,549 		JBrowse link
G Pcna proliferating cell nuclear antigen ISO RGD PMID:10856886 RGD:10448987 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pgr progesterone receptor ISO RGD PMID:16461543 RGD:7248717 NCBI chrNW_004936551:6,498,553...6,573,212
Ensembl chrNW_004936551:6,498,553...6,573,222 		JBrowse link
G Ptn pleiotrophin involved_in ISO
IEA		 RGD
Ensembl		 PMID:9846168 GO_REF:0000107 RGD:10044015 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO RGD PMID:23869188 RGD:155226878 NCBI chrNW_004936529:425,839...435,590
Ensembl chrNW_004936529:424,720...435,293 		JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO RGD PMID:24577155 RGD:9999435 NCBI chrNW_004936500:21,960...76,895
Ensembl chrNW_004936500:21,942...77,260 		JBrowse link
G Wnt5a Wnt family member 5A ISO RGD PMID:20126574 RGD:2326233 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
follicle-stimulating hormone signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chrNW_004936514:9,923,956...9,928,168
Ensembl chrNW_004936514:9,923,896...9,928,170 		JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Cenpi centromere protein I ISO RGD PMID:7758824 RGD:728588 NCBI chrNW_004936813:171,187...224,442
Ensembl chrNW_004936813:172,894...244,881 		JBrowse link
G Fshb follicle stimulating hormone subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9020850) TreeGrafter
MGI
Ensembl		 PMID:9020850 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936533:7,395,206...7,397,266
Ensembl chrNW_004936533:7,395,206...7,397,266 		JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10330114) MGI
Ensembl
TreeGrafter
RGD		 PMID:10330114 PMID:12145341 PMID:16598027 PMID:16899567 GO_REF:0000107 GO_REF:0000118 RGD:1601255 RGD:1601258 RGD:4140424 NCBI chrNW_004936508:3,601,205...3,754,234
Ensembl chrNW_004936508:3,601,315...3,753,706 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004936599:2,437,061...2,456,141
Ensembl chrNW_004936599:2,437,032...2,456,147 		JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
generation of ovulation cycle rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364017) Ensembl
MGI		 PMID:15364017 GO_REF:0000107 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246 		JBrowse link
G Kiss1 KiSS-1 metastasis suppressor ISO RGD PMID:15976058 RGD:2292152 NCBI chrNW_004936567:584,443...595,045
Ensembl chrNW_004936567:584,443...586,837 		JBrowse link
G Npy5r neuropeptide Y receptor Y5 ISO RGD PMID:12047724 RGD:1625504 NCBI chrNW_004936555:2,248,699...2,252,637
Ensembl chrNW_004936555:2,248,699...2,252,637 		JBrowse link
initiation of primordial ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxo3 forkhead box O3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855809) Ensembl
MGI		 PMID:12855809 GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837 		JBrowse link
G Gas2 growth arrest specific 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27734842) MGI
Ensembl		 PMID:27734842 GO_REF:0000107 NCBI chrNW_004936654:3,326,557...3,448,930
Ensembl chrNW_004936654:3,326,511...3,448,872 		JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26131556) Ensembl
MGI		 PMID:26131556 GO_REF:0000107 NCBI chrNW_004936490:6,341,849...6,494,377
Ensembl chrNW_004936490:6,371,204...6,632,690 		JBrowse link
G Ciart circadian associated repressor of transcription involved_in ISO (PMID:24736997) UniProt PMID:24736997 NCBI chrNW_004936580:566,745...571,160 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995 		JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:4,370,222...4,828,972
Ensembl chrNW_004936605:4,372,671...4,825,423 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365 		JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004936896:228,908...539,836
Ensembl chrNW_004936896:230,494...540,071 		JBrowse link
G Mc3r melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936875:172,764...174,446
Ensembl chrNW_004936875:172,862...173,830 		JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (PMID:19037247) UniProt PMID:19037247 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223 		JBrowse link
G Nms neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 Ensembl chrNW_004936661:479,838...493,365 JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097 		JBrowse link
G Pln phospholamban involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:1,443,626...1,453,770
Ensembl chrNW_004936658:1,443,795...1,453,839 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:17706614) CACAO PMID:17706614 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:38172607) MGI
Ensembl		 PMID:38172607 GO_REF:0000107 NCBI chrNW_004936530:4,756,069...4,761,484
Ensembl chrNW_004936530:4,753,751...4,761,695 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925 		JBrowse link
luteinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn5 calpain 5 ISO RGD PMID:19415717 RGD:2313170 NCBI chrNW_004936498:5,692,910...5,747,329
Ensembl chrNW_004936498:5,692,867...5,748,416 		JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within ISO (PMID:19056881) MGI PMID:19056881 NCBI chrNW_004936475:15,513,402...15,662,330
Ensembl chrNW_004936475:15,511,804...15,662,330 		JBrowse link
G Fzd4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16093361) Ensembl
MGI		 PMID:16093361 GO_REF:0000107 NCBI chrNW_004936498:14,657,641...14,666,853
Ensembl chrNW_004936498:14,662,659...14,666,883 		JBrowse link
G LOC101954516 signal transducer and activator of transcription 5B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9630227) RGD
MGI
Ensembl		 PMID:9630227 PMID:10598581 GO_REF:0000107 RGD:1601386 NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941 		JBrowse link
G LOC101954950 aromatase ISO RGD PMID:23183184 RGD:7257725 NCBI chrNW_004936471:13,107,603...13,136,910
Ensembl chrNW_004936471:13,107,603...13,136,910 		JBrowse link
G LOC101959212 alpha-2-macroglobulin ISO RGD PMID:2479532 RGD:10046034 NCBI chrNW_004936870:424,832...468,303
Ensembl chrNW_004936870:424,951...468,167 		JBrowse link
G LOC101961715 schwannomin-interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:6,030,674...6,130,309
Ensembl chrNW_004936519:5,722,599...6,130,723 		JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857 		JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:10537164 RGD:7207086 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851 		JBrowse link
G Nr5a1 nuclear receptor subfamily 5 group A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15118069) Ensembl
MGI		 PMID:15118069 GO_REF:0000107 NCBI chrNW_004936487:12,739,445...12,763,729
Ensembl chrNW_004936487:12,739,439...12,763,734 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19056881) MGI
Ensembl		 PMID:19056881 GO_REF:0000107 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587 		JBrowse link
G Pgr progesterone receptor ISO RGD PMID:8344215 RGD:1601291 NCBI chrNW_004936551:6,498,553...6,573,212
Ensembl chrNW_004936551:6,498,553...6,573,222 		JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19056881) MGI
Ensembl		 PMID:19056881 GO_REF:0000107 NCBI chrNW_004936486:11,203,873...11,241,028 JBrowse link
G Ptprn protein tyrosine phosphatase receptor type N involved_in ISO (PMID:16269463) UniProt PMID:16269463 NCBI chrNW_004936569:1,698,718...1,717,639
Ensembl chrNW_004936569:1,696,059...1,717,744 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19056881) MGI
Ensembl		 PMID:19056881 GO_REF:0000107 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 ISO RGD PMID:16940287 RGD:4107077 NCBI chrNW_004936527:739,325...754,259
Ensembl chrNW_004936527:739,281...754,331 		JBrowse link
G Casp3 caspase 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004936646:1,665,019...1,669,212 JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO RGD PMID:21209419 RGD:155663486 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717 		JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857 		JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:10537164 RGD:7207086 NCBI chrNW_004936551:5,040,084...5,050,384
Ensembl chrNW_004936551:5,040,084...5,050,384 		JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chrNW_004936646:298,854...304,479
Ensembl chrNW_004936646:299,059...304,430 		JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:21209419 RGD:155663486 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Notch4 notch receptor 4 ISO RGD PMID:21209419 RGD:155663486 NCBI chrNW_004936727:1,386,842...1,409,823 JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:11444430 RGD:1642472 NCBI chrNW_004936481:3,559,377...3,689,797
Ensembl chrNW_004936481:3,559,358...3,689,833 		JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK interacting pacemaker involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936488:5,938,328...5,954,246
Ensembl chrNW_004936488:5,938,170...5,953,812 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) UniProt PMID:25936801
G Per2 period circadian regulator 2 involved_in ISO (PMID:19605937) UniProt PMID:19605937 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,078,681...6,133,184
Ensembl chrNW_004936555:6,078,681...6,133,020 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:21680841) UniProt PMID:21680841 NCBI chrNW_004936474:17,776,490...17,791,966 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,206,084...34,260,538
Ensembl chrNW_004936471:34,204,524...34,260,564 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chrNW_004936567:1,430,128...1,508,626
Ensembl chrNW_004936567:1,429,817...1,462,532 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,037,862...3,044,863
Ensembl chrNW_004936602:3,038,549...3,042,506 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004936567:1,430,128...1,508,626
Ensembl chrNW_004936567:1,429,817...1,462,532 		JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444 		JBrowse link
negative regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp53 tumor protein p53 involved_in ISO (PMID:18703674) AgBase PMID:18703674 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp15 bone morphogenetic protein 15 involved_in ISO (PMID:24313324) AgBase PMID:24313324 NCBI chrNW_004936873:109,156...115,498 JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:2,346,601...2,595,283
Ensembl chrNW_004936687:2,503,777...2,597,522 		JBrowse link
G Ereg epiregulin involved_in ISO PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chrNW_004936598:1,328,803...1,336,141
Ensembl chrNW_004936598:1,328,803...1,344,360 		JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) AgBase PMID:24313324 NCBI chrNW_004936647:2,351,604...2,357,043
Ensembl chrNW_004936647:2,353,198...2,356,790 		JBrowse link
G Ptx3 pentraxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17675295) Ensembl
MGI		 PMID:17675295 GO_REF:0000107 NCBI chrNW_004936519:4,303,549...4,309,143
Ensembl chrNW_004936519:4,303,464...4,309,173 		JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,129,339...26,145,464
Ensembl chrNW_004936469:26,129,331...26,145,422 		JBrowse link
ovarian follicle rupture term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:11384650) MGI PMID:11384650 NCBI chrNW_004936484:19,713,299...19,721,144
Ensembl chrNW_004936484:19,716,165...19,721,261 		JBrowse link
G Edn2 endothelin 2 ISO RGD PMID:16410304 RGD:1581792 NCBI chrNW_004936474:23,061,219...23,064,525
Ensembl chrNW_004936474:23,060,905...23,064,566 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:7,886,327...7,966,969
Ensembl chrNW_004936505:7,884,724...7,966,928 		JBrowse link
ovulation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18787040) MGI
Ensembl		 PMID:18787040 GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816 		JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO RGD PMID:15283681 RGD:2289021 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:2,346,601...2,595,283
Ensembl chrNW_004936687:2,503,777...2,597,522 		JBrowse link
G Chga chromogranin A ISO RGD PMID:12873792 RGD:6907048 NCBI chrNW_004936733:915,700...927,220
Ensembl chrNW_004936733:915,830...927,409 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1400473) Ensembl
MGI		 PMID:1400473 GO_REF:0000107 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246 		JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:11796513 RGD:70386 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:16461545 RGD:1600349 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:16226387 RGD:6480231 NCBI chrNW_004936482:13,219,962...13,593,868
Ensembl chrNW_004936482:13,220,236...13,586,209 		JBrowse link
G Gdf10 growth differentiation factor 10 ISO RGD PMID:12741959 RGD:2316371 NCBI chrNW_004936554:7,292,805...7,307,001
Ensembl chrNW_004936554:7,292,767...7,307,009 		JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:16672174 RGD:1599845 NCBI chrNW_004936757:1,282,185...1,285,804
Ensembl chrNW_004936757:1,282,185...1,285,832 		JBrowse link
G Nhlh2 nescient helix-loop-helix 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15465527) Ensembl
MGI		 PMID:15465527 GO_REF:0000107 NCBI chrNW_004936627:1,130,064...1,135,092
Ensembl chrNW_004936627:1,131,807...1,135,012 		JBrowse link
G Prl prolactin ISO RGD PMID:17499646 RGD:1642571 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:23466670 RGD:8590225 NCBI chrNW_004936538:7,885,816...7,898,308
Ensembl chrNW_004936538:7,885,475...7,899,113 		JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:12493716 RGD:1302332 NCBI chrNW_004936602:1,488,993...1,496,108
Ensembl chrNW_004936602:1,489,545...1,495,478 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18787040) Ensembl
MGI		 PMID:18787040 GO_REF:0000107 NCBI chrNW_004936471:4,893,185...4,910,779
Ensembl chrNW_004936471:4,893,078...4,910,859 		JBrowse link
ovulation cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:16400681 RGD:5133250 NCBI chrNW_004936474:28,147,459...28,180,779
Ensembl chrNW_004936474:28,147,085...28,182,043 		JBrowse link
G Fshr follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11089565) Ensembl
MGI		 PMID:11089565 GO_REF:0000107 NCBI chrNW_004936508:3,601,205...3,754,234
Ensembl chrNW_004936508:3,601,315...3,753,706 		JBrowse link
G Glrx glutaredoxin ISO RGD PMID:15956334 RGD:9686044 NCBI chrNW_004936523:7,535,650...7,544,339
Ensembl chrNW_004936523:7,535,857...7,541,864 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11145748) Ensembl
MGI
TreeGrafter		 PMID:11145748 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936508:3,928,467...3,983,481
Ensembl chrNW_004936508:3,928,466...3,983,890 		JBrowse link
G Mstn myostatin ISO RGD PMID:18845635 RGD:2303546 NCBI chrNW_004936506:7,988,879...7,996,260
Ensembl chrNW_004936506:7,988,718...7,996,971 		JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9618561 RGD:2302425 NCBI chrNW_004936523:1,492,795...1,786,942
Ensembl chrNW_004936523:1,493,450...1,750,524 		JBrowse link
ovulation from ovarian follicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14668204) MGI
Ensembl		 PMID:14668204 GO_REF:0000107 NCBI chrNW_004936640:959,405...967,305
Ensembl chrNW_004936640:959,417...968,842 		JBrowse link
G Afp alpha fetoprotein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12297623) MGI
Ensembl		 PMID:12297623 GO_REF:0000107 NCBI chrNW_004936598:2,058,474...2,077,711
Ensembl chrNW_004936598:2,058,117...2,077,728 		JBrowse link
G Foxo3 forkhead box O3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855809) Ensembl
MGI		 PMID:12855809 GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837 		JBrowse link
G Lep leptin ISO RGD PMID:17071778 RGD:1582677 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Lepr leptin receptor ISO RGD PMID:12959975 RGD:1582680 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444 		JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chrNW_004936646:298,854...304,479
Ensembl chrNW_004936646:299,059...304,430 		JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:14668206 RGD:1582606 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851 		JBrowse link
G Nos2 nitric oxide synthase 2 NOT|acts_upstream_of_or_within ISO (PMID:11779605) MGI PMID:11779605 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11779605) Ensembl
MGI		 PMID:11779605 GO_REF:0000107 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO (PMID:10518565) MGI PMID:10518565 NCBI chrNW_004936480:8,123,437...9,235,586
Ensembl chrNW_004936480:8,204,701...9,234,865 		JBrowse link
G Pgr progesterone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12897242) Ensembl
MGI		 PMID:12897242 GO_REF:0000107 NCBI chrNW_004936551:6,498,553...6,573,212
Ensembl chrNW_004936551:6,498,553...6,573,222 		JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:10189070 RGD:1642477 NCBI chrNW_004936481:3,559,377...3,689,797
Ensembl chrNW_004936481:3,559,358...3,689,833 		JBrowse link
G Sirt1 sirtuin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12482959) Ensembl
MGI		 PMID:12482959 GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
positive regulation of antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:15944932 RGD:10003098 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,013,231...2,022,270 JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:181,793...241,050
Ensembl chrNW_004936548:182,075...225,856 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:3,256,658...3,341,918
Ensembl chrNW_004936609:3,256,657...3,341,994 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128 		JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chrNW_004936674:1,703,814...1,713,860
Ensembl chrNW_004936674:1,703,814...1,713,860 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chrNW_004936787:330,390...1,491,994
Ensembl chrNW_004936787:332,342...1,491,285 		JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643 		JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (PMID:22753030) UniProt PMID:22753030 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,691,872...18,749,217
Ensembl chrNW_004936474:18,691,835...18,749,235 		JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chrNW_004936478:7,188,826...7,202,854
Ensembl chrNW_004936478:7,188,826...7,201,932 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,037,862...3,044,863
Ensembl chrNW_004936602:3,038,549...3,042,506 		JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chrNW_004936674:1,703,814...1,713,860
Ensembl chrNW_004936674:1,703,814...1,713,860 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chrNW_004936576:1,932,526...1,939,560
Ensembl chrNW_004936576:1,932,870...1,938,703 		JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405 		JBrowse link
G Pmch pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chrNW_004936492:11,947,489...11,948,896
Ensembl chrNW_004936492:11,947,489...11,948,896 		JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936623:2,339,259...2,345,717
Ensembl chrNW_004936623:2,340,778...2,345,700 		JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936923:24,952...31,083 JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004936619:597,970...618,564
Ensembl chrNW_004936619:608,441...616,779 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Nps neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chrNW_004936486:15,172,068...15,175,568
Ensembl chrNW_004936486:15,172,256...15,175,339 		JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936623:2,339,259...2,345,717
Ensembl chrNW_004936623:2,340,778...2,345,700 		JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936923:24,952...31,083 JBrowse link
positive regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 ISO RGD PMID:25120590 RGD:13204819 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556 		JBrowse link
G Retn resistin ISO RGD PMID:21239528 RGD:7207233 NCBI chrNW_004936588:4,705,295...4,706,653
Ensembl chrNW_004936588:4,705,119...4,706,656 		JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone ISO RGD PMID:11133686 RGD:2315649 NCBI chrNW_004936588:1,342,791...1,345,746
Ensembl chrNW_004936588:1,343,085...1,345,654 		JBrowse link
G Gpr149 G protein-coupled receptor 149 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19887567) Ensembl
MGI		 PMID:19887567 GO_REF:0000107 NCBI chrNW_004936519:1,997,492...2,070,157
Ensembl chrNW_004936519:1,998,086...2,070,481 		JBrowse link
G Znf830 zinc finger protein 830 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:243,557...245,353
Ensembl chrNW_004936538:244,188...245,300 		JBrowse link
primary ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12801993) Ensembl
MGI		 PMID:12801993 GO_REF:0000107 NCBI chrNW_004936508:3,601,205...3,754,234
Ensembl chrNW_004936508:3,601,315...3,753,706 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:4,084,161...4,194,858
Ensembl chrNW_004936567:4,084,608...4,212,854 		JBrowse link
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 acts_upstream_of_or_within ISO (PMID:18753606) MGI PMID:18753606 NCBI chrNW_004936472:30,335,290...30,392,621 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:22905678 RGD:13210788 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16093361) Ensembl
MGI		 PMID:16093361 GO_REF:0000107 NCBI chrNW_004936498:14,657,641...14,666,853
Ensembl chrNW_004936498:14,662,659...14,666,883 		JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:10932194) UniProt PMID:10932194 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:20,310,509...20,477,506
Ensembl chrNW_004936478:20,310,503...20,456,141 		JBrowse link
G Atg7 autophagy related 7 involved_in ISO (PMID:29937374) UniProt PMID:29937374 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,341,455...6,356,677
Ensembl chrNW_004936555:6,341,390...6,356,668 		JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:2,300,682...2,313,611
Ensembl chrNW_004936614:2,300,513...2,313,624 		JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (PMID:19414593), (PMID:21930935) UniProt PMID:19414593 PMID:21930935 NCBI chrNW_004936594:5,720,887...5,743,206
Ensembl chrNW_004936594:5,724,406...5,743,180 		JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598 		JBrowse link
G Drd4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:468,334...471,254
Ensembl chrNW_004936888:468,403...471,205 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:28556462) UniProt PMID:28556462 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chrNW_004936470:40,980,487...40,986,880
Ensembl chrNW_004936470:40,980,487...40,986,885 		JBrowse link
G LOC101967743 casein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,904,622...2,925,904
Ensembl chrNW_004936492:2,907,015...2,928,418 		JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936909:493,998...592,649
Ensembl chrNW_004936909:585,206...592,644 		JBrowse link
G Magel2 MAGE family member L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936805:882,296...886,442
Ensembl chrNW_004936805:882,273...886,475 		JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004936896:228,908...539,836
Ensembl chrNW_004936896:230,494...540,071 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:551,678...602,027
Ensembl chrNW_004936739:551,629...602,047 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Noct nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928 		JBrowse link
G Nono non-POU domain containing octamer binding involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:24048828) UniProt PMID:24048828 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (PMID:29533925)
(PMID:23221024)		 UniProt PMID:23221024 PMID:29533925 NCBI chrNW_004936473:15,624,597...15,646,875 JBrowse link
G Opn4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:261,210...272,449
Ensembl chrNW_004936804:263,720...272,132 		JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:11395012), (PMID:19917250) UniProt PMID:11395012 PMID:19917250 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:19041764) UniProt PMID:19041764 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Prkcg protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936994:87,525...105,125
Ensembl chrNW_004936994:87,519...105,134 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
G Pspc1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:1,876,726...1,941,705
Ensembl chrNW_004936720:1,876,475...1,967,662 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836) UniProt PMID:23172836 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244 		JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643 		JBrowse link
G Rorb RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:22966205) UniProt PMID:22966205 NCBI chrNW_004936474:17,776,490...17,791,966 JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936758:1,115,980...1,132,225
Ensembl chrNW_004936758:1,116,056...1,213,442 		JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:2,953,837...3,021,430
Ensembl chrNW_004936540:2,953,831...3,021,485 		JBrowse link
G Srrd SRR1 domain containing involved_in ISO (PMID:28802827) UniProt PMID:28802827 NCBI chrNW_004936657:1,104,833...1,112,854
Ensembl chrNW_004936657:1,104,833...1,112,374 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:27123980) UniProt PMID:27123980 NCBI chrNW_004936474:90,813...103,713 JBrowse link
G Timeless timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:7,693,681...7,724,215
Ensembl chrNW_004936530:7,694,379...7,724,684 		JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,649,808...7,732,731
Ensembl chrNW_004936502:7,649,842...7,735,382 		JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443 		JBrowse link
G Il6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:2,007,577...2,019,520
Ensembl chrNW_004936704:2,007,577...2,017,764 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:34798058) UniProt PMID:34798058 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:4,400,467...4,401,588
Ensembl chrNW_004936486:4,399,915...4,403,149 		JBrowse link
G Cort cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chrNW_004936623:4,287,175...4,289,347 JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chrNW_004936647:3,081,896...3,083,864
Ensembl chrNW_004936647:3,081,896...3,083,864 		JBrowse link
G Drd3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chrNW_004936536:1,580,732...1,616,726
Ensembl chrNW_004936536:1,580,732...1,616,725 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936566:2,354,301...2,425,140
Ensembl chrNW_004936566:2,354,441...2,425,176 		JBrowse link
G Nmu neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 Ensembl chrNW_004936482:17,936,467...17,961,711 JBrowse link
G Per3 period circadian regulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chrNW_004936706:2,317,137...2,320,993
Ensembl chrNW_004936706:2,315,132...2,320,796 		JBrowse link
G Ptgds prostaglandin D2 synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:961,246...964,584
Ensembl chrNW_004936669:961,034...965,136 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chrNW_004936476:5,838,663...5,933,174
Ensembl chrNW_004936476:5,838,830...5,933,207 		JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746 		JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chrNW_004936514:11,264,392...11,273,584
Ensembl chrNW_004936514:11,258,335...11,273,592 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) UniProt PMID:26232227 NCBI chrNW_004936475:21,005,242...21,235,992
Ensembl chrNW_004936475:21,080,302...21,231,544 		JBrowse link
regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf9 growth differentiation factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:2,351,604...2,357,043
Ensembl chrNW_004936647:2,353,198...2,356,790 		JBrowse link
ultradian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enox1 ecto-NOX disulfide-thiol exchanger 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936747:380,813...709,258
Ensembl chrNW_004936747:502,895...709,663 		JBrowse link
G Enox2 ecto-NOX disulfide-thiol exchanger 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936479:750,699...1,048,255
Ensembl chrNW_004936479:871,357...1,049,377 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17411
    rhythmic process 399
      circadian rhythm + 270
      ovulation cycle + 128
      ovulation cycle process + 81
      ultradian rhythm + 2
paths to the root