Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:rhythmic process
go back to main search page
Accession:GO:0048511 term browser browse the term
Definition:Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.
Synonyms:related_synonym: rhythm
 only_in_taxon: NCBITaxon:131567 ! cellular organisms


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
rhythmic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624801:6,329,090...6,333,290
Ensembl chrNW_004624801:6,331,505...6,333,599
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Clock clock circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Crebbp CREB binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Dbp D-box binding PAR bZIP transcription factor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624832:5,240,338...5,246,185
Ensembl chrNW_004624832:5,240,365...5,246,185
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156
JBrowse link
G Dnm1l dynamin 1 like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Egr1 early growth response 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004624752:24,008,520...24,480,834
Ensembl chrNW_004624752:24,135,487...24,459,288
JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004624758:9,579,750...9,756,396
Ensembl chrNW_004624758:9,579,752...9,756,525
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809
JBrowse link
G Hes7 hes family bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:15170214)
(PMID:11641270)
MGI PMID:11641270 PMID:15170214 NCBI chrNW_004624786:10,692,329...10,699,346
Ensembl chrNW_004624786:10,692,329...10,695,132
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:10,520,106...10,573,206
Ensembl chrNW_004624795:10,520,044...10,573,328
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624764:8,175,841...8,177,444
Ensembl chrNW_004624764:8,175,372...8,177,451
JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624782:11,884,847...11,903,944
Ensembl chrNW_004624782:11,884,631...11,903,947
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785
JBrowse link
G LOC101702367 DNA topoisomerase 2-alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:2,903,686...2,927,028
Ensembl chrNW_004624795:2,898,038...2,926,049
JBrowse link
G LOC101711512 histone acetyltransferase p300 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:7,402,305...7,481,612
Ensembl chrNW_004624752:7,401,848...7,481,696
JBrowse link
G LOC101712251 dynamin-1-like protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624758:365,219...368,500 JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624733:42,998,948...43,048,392
Ensembl chrNW_004624733:42,999,339...43,048,285
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624739:23,411,478...23,444,590
Ensembl chrNW_004624739:23,411,488...23,442,359
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624868:1,139,575...1,150,370
Ensembl chrNW_004624868:1,139,595...1,150,370
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Per3 period circadian regulator 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624730:28,159,096...28,178,832
Ensembl chrNW_004624730:28,158,750...28,178,810
JBrowse link
G Tef TEF transcription factor, PAR bZIP family member involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:7,159,791...7,186,043
Ensembl chrNW_004624752:7,159,362...7,186,022
JBrowse link
G Timeless timeless circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Top1 DNA topoisomerase I involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629
JBrowse link
G Tp53 tumor protein p53 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccne1 cyclin E1 ISO RGD PMID:17084963 RGD:2289278 NCBI chrNW_004624794:4,957,156...4,967,058
Ensembl chrNW_004624794:4,957,178...4,967,140
JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:16846505 RGD:1600848 NCBI chrNW_004624928:357,812...401,668
Ensembl chrNW_004624928:360,704...399,714
JBrowse link
G Esr1 estrogen receptor 1 acts_upstream_of_or_within ISO (PMID:10976058) MGI PMID:10976058 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:14978268) MGI PMID:14978268 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Gas2 growth arrest specific 2 acts_upstream_of_or_within ISO (PMID:27734842) MGI PMID:27734842 NCBI chrNW_004624766:13,610,229...13,741,604
Ensembl chrNW_004624766:13,612,702...13,741,606
JBrowse link
G Gpr149 G protein-coupled receptor 149 acts_upstream_of_or_within ISO (PMID:19887567) MGI PMID:19887567 NCBI chrNW_004624730:31,921,433...31,999,075
Ensembl chrNW_004624730:31,921,426...31,998,801
JBrowse link
G Scaper S-phase cyclin A associated protein in the ER acts_upstream_of_or_within ISO (PMID:32510560) MGI PMID:32510560 NCBI chrNW_004624894:1,468,294...1,847,661
Ensembl chrNW_004624894:1,468,299...1,847,784
JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004624745:800,963...2,121,445
Ensembl chrNW_004624745:804,797...1,390,551
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Slit3 slit guidance ligand 3 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004624733:20,683,680...21,293,663
Ensembl chrNW_004624733:20,683,814...21,291,088
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22678064) TreeGrafter
MGI
PMID:22678064 GO_REF:0000118 NCBI chrNW_004624754:19,562,532...20,014,323
Ensembl chrNW_004624754:19,616,547...20,011,989
JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in ISO (PMID:27142930) UniProt PMID:27142930 NCBI chrNW_004624818:3,109,457...3,123,819
Ensembl chrNW_004624818:3,109,407...3,123,912
JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in ISO (PMID:26882873) UniProt PMID:26882873 NCBI chrNW_004624804:7,119,104...7,249,561
Ensembl chrNW_004624804:7,119,323...7,248,778
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:38172607) Ensembl
MGI
PMID:38172607 GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:21525287) MGI PMID:21525287 NCBI chrNW_004624738:26,379,172...26,391,669
Ensembl chrNW_004624738:26,380,088...26,394,252
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:24051492) UniProt PMID:24051492 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004624754:7,612,817...8,156,038
Ensembl chrNW_004624754:7,612,881...8,156,681
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:20106950) UniProt PMID:20106950 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (PMID:18411297)
(PMID:18411297), (PMID:30012868)
BHF-UCL
UniProt
PMID:18411297 PMID:30012868 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO (PMID:18411297) BHF-UCL PMID:18411297 NCBI chrNW_004624752:13,000,238...13,004,777
Ensembl chrNW_004624752:13,000,525...13,003,079
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645
JBrowse link
G Cartpt CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chrNW_004624905:751,032...753,012
Ensembl chrNW_004624905:751,223...752,845
JBrowse link
G Cavin3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,836,671...7,838,590
Ensembl chrNW_004624817:7,836,557...7,838,718
JBrowse link
G Ciart circadian associated repressor of transcription involved_in IEA TreeGrafter
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692
JBrowse link
G Clock clock circadian regulator involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (PMID:23443664) UniProt PMID:23443664 NCBI chrNW_004624805:6,890,484...6,992,469
Ensembl chrNW_004624805:6,923,557...6,992,450
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (PMID:19414593), (PMID:21930935) UniProt PMID:19414593 PMID:21930935 NCBI chrNW_004624801:11,031,102...11,074,100
Ensembl chrNW_004624801:11,032,021...11,058,551
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:16606840) MGI PMID:16606840 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:15878801) MGI PMID:15878801 NCBI chrNW_004624731:34,318,733...34,369,111
Ensembl chrNW_004624731:34,319,130...34,363,184
JBrowse link
G Egr1 early growth response 1 involved_in ISO (PMID:26471974), (PMID:29138967) UniProt PMID:26471974 PMID:29138967 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 involved_in ISO (PMID:23395176) UniProt PMID:23395176 NCBI chrNW_004624762:3,943,074...4,016,090
Ensembl chrNW_004624762:3,942,972...4,010,498
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:15226430) UniProt PMID:15226430 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:15226430) UniProt PMID:15226430 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592
JBrowse link
G Hdac3 histone deacetylase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:26776516)
(PMID:19037247)
UniProt
MGI
PMID:19037247 PMID:26776516 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809
JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:18332112) UniProt PMID:18332112 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:20534529) UniProt PMID:20534529 NCBI chrNW_004624909:745,141...891,421
Ensembl chrNW_004624909:745,651...859,233
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:897,038...898,249
Ensembl chrNW_004624741:896,932...898,343
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:8,175,841...8,177,444
Ensembl chrNW_004624764:8,175,372...8,177,451
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004624767:19,247,009...19,365,520
Ensembl chrNW_004624767:19,248,430...19,364,793
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (PMID:21960634) UniProt PMID:21960634 NCBI chrNW_004624735:8,473,778...8,631,964
Ensembl chrNW_004624735:8,530,016...8,631,954
Ensembl chrNW_004624735:8,530,016...8,631,954
JBrowse link
G Kdm8 lysine demethylase 8 involved_in ISO (PMID:30500822) UniProt PMID:30500822 NCBI chrNW_004624782:11,884,847...11,903,944
Ensembl chrNW_004624782:11,884,631...11,903,947
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (PMID:21113167) UniProt PMID:21113167 NCBI chrNW_004624784:13,824,507...13,912,672
Ensembl chrNW_004624784:13,824,541...13,908,077
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (PMID:24353284) UniProt PMID:24353284 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624981:53,502...229,889
Ensembl chrNW_004624981:222,344...233,078
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISO (PMID:19036988) UniProt PMID:19036988 NCBI chrNW_004624790:284,586...287,268
Ensembl chrNW_004624790:285,965...286,936
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISO (PMID:19129230) UniProt PMID:19129230 NCBI chrNW_004624786:7,103,811...7,118,569 JBrowse link
G Mycbp2 MYC binding protein 2 involved_in ISO (PMID:20534529) UniProt PMID:20534529 NCBI chrNW_004624751:23,048,373...23,355,510
Ensembl chrNW_004624751:23,048,404...23,355,510
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624739:23,411,478...23,444,590
Ensembl chrNW_004624739:23,411,488...23,442,359
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (PMID:24529706) UniProt PMID:24529706 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:19037247) MGI PMID:19037247 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Noct nocturnin involved_in ISO (PMID:20685873) UniProt PMID:20685873 NCBI chrNW_004624777:19,379,447...19,383,477 JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:10,896,728...10,899,898
Ensembl chrNW_004624764:10,892,481...10,899,215
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624745:3,389,486...3,469,599
Ensembl chrNW_004624745:3,392,572...3,468,576
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:21,702,453...21,716,805
Ensembl chrNW_004624743:21,701,158...21,717,123
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:23395176) UniProt PMID:23395176 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Per3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22274616) UniProt PMID:22274616 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (PMID:17476214) UniProt PMID:17476214 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (PMID:21930935) UniProt PMID:21930935 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chrNW_004624757:9,799,777...9,904,825
Ensembl chrNW_004624757:9,798,808...9,906,517
JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (PMID:23133559) UniProt PMID:23133559 NCBI chrNW_004624820:9,599,867...9,608,578
Ensembl chrNW_004624820:9,599,734...9,608,703
JBrowse link
G Rai1 retinoic acid induced 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:3,624,436...3,749,276
Ensembl chrNW_004624849:3,625,882...3,640,671
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (PMID:22894897) UniProt PMID:22894897 NCBI chrNW_004624907:1,806,784...1,829,686
Ensembl chrNW_004624907:1,806,874...1,829,417
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (PMID:22753030) UniProt PMID:22753030 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (PMID:22753030), (PMID:23723244) UniProt PMID:22753030 PMID:23723244 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18662546), (PMID:19299583) UniProt PMID:18662546 PMID:19299583 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:25083875) UniProt PMID:25083875 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) UniProt PMID:26232227 NCBI chrNW_004624746:15,094,890...15,330,653
Ensembl chrNW_004624746:15,098,960...15,254,127
JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (PMID:31560728) MGI PMID:31560728 NCBI chrNW_004624795:3,242,607...3,252,997 JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835
JBrowse link
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in IEA
ISS
ISO
TreeGrafter
UniProt
RGD
PMID:16166080 PMID:18321474 GO_REF:0000024 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chrNW_004624801:6,329,090...6,333,290
Ensembl chrNW_004624801:6,331,505...6,333,599
JBrowse link
G Actb actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chrNW_004624740:6,915,445...7,003,299
Ensembl chrNW_004624740:6,922,879...7,003,658
JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chrNW_004624816:3,366,594...3,387,431
Ensembl chrNW_004624816:3,366,744...3,387,447
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004624730:69,941,963...69,959,266
Ensembl chrNW_004624730:69,941,001...69,957,012
JBrowse link
G Agrn agrin acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786
JBrowse link
G Agrp agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chrNW_004624746:18,826,206...18,827,453
Ensembl chrNW_004624746:18,826,545...18,827,299
JBrowse link
G Ahr aryl hydrocarbon receptor ISO RGD PMID:9813174 RGD:405866391 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:9813174 RGD:405866391 NCBI chrNW_004624772:18,949,221...19,016,672
Ensembl chrNW_004624772:18,949,108...19,015,504
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G Atf5 activating transcription factor 5 involved_in ISO (PMID:21768648) UniProt PMID:21768648 NCBI chrNW_004624832:4,400,586...4,405,203
Ensembl chrNW_004624832:4,396,604...4,405,185
JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:32272782 RGD:407571700 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:12451142) MGI PMID:12451142 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chrNW_004624907:715,109...736,040
Ensembl chrNW_004624907:715,094...736,432
JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chrNW_004624748:2,112,574...2,183,994
Ensembl chrNW_004624748:2,113,094...2,205,856
JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G Becn1 beclin 1 ISO RGD PMID:32272782 RGD:407571700 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO PMID:12397359
(PMID:28797635)
(PMID:19786558)
UniProt PMID:12397359 PMID:19786558 PMID:28797635 RGD:625726 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO PMID:12397359
(PMID:19786558)
UniProt PMID:12397359 PMID:19786558 RGD:625726 NCBI chrNW_004624752:13,000,238...13,004,777
Ensembl chrNW_004624752:13,000,525...13,003,079
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within
involved_in
ISO (PMID:11163178), (PMID:26945058)
(PMID:17264215)
(PMID:14645221), (PMID:19217292), (PMID:19740747)
(PMID:31294688)
(PMID:12024206), (PMID:12150932), (PMID:12843397), (PMID:12897057)
MGI
UniProt
RGD
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... RGD:10043346 RGD:67927 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chrNW_004624802:10,191,679...10,194,585
Ensembl chrNW_004624802:10,191,014...10,194,275
JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chrNW_004624740:14,033,848...14,035,854 JBrowse link
G Clock clock circadian regulator acts_upstream_of_or_within
involved_in
ISO (PMID:12897057)
(PMID:12024206), (PMID:8171325)
(PMID:14645221)
MGI
UniProt
RGD
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 PMID:14645221 RGD:10401879 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26945058) MGI
Ensembl
PMID:26945058 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO (PMID:20852621) RGD
UniProt
PMID:20852621 PMID:21367864 RGD:7247438 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (PMID:23443664) UniProt PMID:23443664 NCBI chrNW_004624805:6,890,484...6,992,469
Ensembl chrNW_004624805:6,923,557...6,992,450
JBrowse link
G Crx cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chrNW_004624832:6,103,530...6,108,129
Ensembl chrNW_004624832:6,104,229...6,108,146
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in
acts_upstream_of_or_within
ISO (PMID:29561690)
(PMID:12024206)
(PMID:17264215)
(PMID:12843397)
(PMID:23133559)
UniProt
MGI
PMID:12024206 PMID:12843397 PMID:17264215 PMID:23133559 PMID:29561690 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO (PMID:12024206)
(PMID:17264215)
(PMID:20123978), (PMID:29561690)
MGI
UniProt
RGD
PMID:11804325 PMID:12024206 PMID:17264215 PMID:20123978 PMID:29561690 RGD:632584 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chrNW_004624740:3,674,727...3,732,058
Ensembl chrNW_004624740:3,674,609...3,732,676
JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156
JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075
JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chrNW_004624766:21,834,093...21,837,314
Ensembl chrNW_004624766:21,834,169...21,836,710
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (PMID:20123978) UniProt PMID:20123978 NCBI chrNW_004624745:26,180,858...26,316,848
Ensembl chrNW_004624745:26,180,864...26,315,234
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004624802:11,906,279...11,925,530
Ensembl chrNW_004624802:11,905,271...11,925,707
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chrNW_004624793:780,057...788,105
Ensembl chrNW_004624793:780,059...788,095
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623
JBrowse link
G Gnrhr gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004624761:1,216,501...1,231,229
Ensembl chrNW_004624761:1,216,556...1,225,994
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:20123978) UniProt PMID:20123978 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:24736997) UniProt PMID:24736997 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025
JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004624794:12,206,278...12,220,679
Ensembl chrNW_004624794:12,206,252...12,218,173
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004624764:7,956,789...7,992,449
Ensembl chrNW_004624764:7,957,395...7,992,398
JBrowse link
G Homer1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chrNW_004624869:3,878,646...4,012,211
Ensembl chrNW_004624869:3,880,001...4,012,240
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chrNW_004624782:8,118,746...8,212,259
Ensembl chrNW_004624782:8,118,106...8,212,237
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624737:1,960,985...2,067,086
Ensembl chrNW_004624737:1,960,057...2,067,038
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004624741:897,038...898,249
Ensembl chrNW_004624741:896,932...898,343
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292), (PMID:19740747) UniProt PMID:19217292 PMID:19740747 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004624764:8,175,841...8,177,444
Ensembl chrNW_004624764:8,175,372...8,177,451
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:20685873) UniProt PMID:20685873 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:28985504) UniProt PMID:28985504 NCBI chrNW_004624730:3,071,132...3,075,870
Ensembl chrNW_004624730:3,071,141...3,075,882
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004624908:1,572,628...1,574,205
Ensembl chrNW_004624908:1,573,174...1,574,113
JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chrNW_004624732:2,684,719...3,150,749
Ensembl chrNW_004624732:2,684,948...3,148,951
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO (PMID:20070857) UniProt PMID:20070857 NCBI chrNW_004624763:19,582,019...19,592,447
Ensembl chrNW_004624763:19,581,730...19,587,730
JBrowse link
G Klf9 KLF transcription factor 9 involved_in ISO (PMID:22711835) UniProt PMID:22711835 NCBI chrNW_004624736:2,653,336...2,682,677
Ensembl chrNW_004624736:2,654,220...2,682,673
JBrowse link
G Lep leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (PMID:24353284) UniProt PMID:24353284 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785
JBrowse link
G Lipc lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chrNW_004624781:13,342,469...13,468,120
Ensembl chrNW_004624781:13,342,357...13,455,055
JBrowse link
G LOC101697640 nuclear factor interleukin-3-regulated protein-like involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624773:16,183,312...16,195,780 JBrowse link
G LOC101721563 25-hydroxycholesterol 7-alpha-hydroxylase ISO RGD PMID:12759897 RGD:1298869 NCBI chrNW_004624744:26,791,829...26,999,584
Ensembl chrNW_004624744:26,792,890...26,991,425
JBrowse link
G LOC110345944 uncharacterized LOC110345944 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:1,362,906...1,366,751 JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004624749:17,596,381...17,603,804
Ensembl chrNW_004624749:17,596,381...17,603,867
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24209618) UniProt PMID:24209618 NCBI chrNW_004624825:7,513,481...7,527,716
Ensembl chrNW_004624825:7,513,481...7,527,695
JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chrNW_004624769:17,320,100...17,355,164
Ensembl chrNW_004624769:17,320,107...17,355,099
JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in ISO (PMID:24353284) UniProt PMID:24353284 NCBI chrNW_004624830:7,463,671...7,505,607
Ensembl chrNW_004624830:7,464,686...7,506,129
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISO (PMID:19299583) RGD
UniProt
PMID:19299583 PMID:26547053 RGD:13781893 NCBI chrNW_004624739:23,411,478...23,444,590
Ensembl chrNW_004624739:23,411,488...23,442,359
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (PMID:24529706) UniProt PMID:24529706 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in ISO (PMID:28985504) UniProt PMID:28985504 NCBI chrNW_004624860:1,703,972...1,729,185
Ensembl chrNW_004624860:1,703,244...1,728,779
JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624868:1,139,575...1,150,370
Ensembl chrNW_004624868:1,139,595...1,150,370
JBrowse link
G Ngf nerve growth factor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Noct nocturnin involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624777:19,379,447...19,383,477 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (PMID:22073225) UniProt PMID:22073225 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:14645221) UniProt PMID:14645221 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624764:10,896,728...10,899,898
Ensembl chrNW_004624764:10,892,481...10,899,215
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12150932) RGD
MGI
Ensembl
PMID:12150932 PMID:24144766 GO_REF:0000107 RGD:10448984 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:3,389,486...3,469,599
Ensembl chrNW_004624745:3,392,572...3,468,576
JBrowse link
G Nrxn1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624885:1,989,027...2,005,474
Ensembl chrNW_004624885:1,989,138...2,005,577
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (PMID:23785138) UniProt PMID:23785138 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601
JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004624783:8,340,098...8,344,371
Ensembl chrNW_004624783:8,340,098...8,344,371
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chrNW_004624804:10,754,978...10,784,641
Ensembl chrNW_004624804:10,755,103...10,784,337
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO
IEA
RGD
UniProt
PMID:11122332 PMID:12176169 GO_REF:0000117 RGD:1299576 RGD:631234 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12843397) RGD
MGI
UniProt
PMID:9765215 PMID:9878515 PMID:12843397 GO_REF:0000117 RGD:10043346 RGD:61691 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Per3 period circadian regulator 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12843397) MGI
UniProt
PMID:12843397 GO_REF:0000117 NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chrNW_004624792:8,448,245...8,680,845
Ensembl chrNW_004624792:8,448,013...8,681,053
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chrNW_004624754:4,679,451...4,681,627
Ensembl chrNW_004624754:4,679,521...4,681,627
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chrNW_004624757:9,799,777...9,904,825
Ensembl chrNW_004624757:9,798,808...9,906,517
JBrowse link
G Prl prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chrNW_004624756:4,585,542...4,593,285 JBrowse link
G Prok2 prokineticin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12024206) Ensembl
MGI
PMID:12024206 GO_REF:0000107 NCBI chrNW_004624773:6,310,025...6,323,245
Ensembl chrNW_004624773:6,307,653...6,323,208
JBrowse link
G Prokr2 prokineticin receptor 2 acts_upstream_of_or_within ISO (PMID:12024206) MGI PMID:12024206 NCBI chrNW_004624741:6,270,098...6,281,147
Ensembl chrNW_004624741:6,270,002...6,281,182
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:23723244) UniProt PMID:23723244 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Rora RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorb RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chrNW_004624811:2,076,474...2,281,933
Ensembl chrNW_004624811:2,076,437...2,277,040
JBrowse link
G Rorc RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chrNW_004624742:27,302,222...27,319,549
Ensembl chrNW_004624742:27,302,453...27,319,203
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004624731:2,254,445...2,356,174
Ensembl chrNW_004624731:2,254,445...2,355,738
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004624731:2,065,228...2,203,215 JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004624787:3,995,319...4,148,230
Ensembl chrNW_004624787:3,997,887...4,085,449
JBrowse link
G Setx senataxin acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004624760:3,932,213...4,007,290
Ensembl chrNW_004624760:3,955,494...4,007,610
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004624749:17,486,483...17,495,822
Ensembl chrNW_004624749:17,486,518...17,493,846
JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004624758:17,742,439...17,744,664
Ensembl chrNW_004624758:17,742,415...17,744,655
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18662546) UniProt PMID:18662546 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chrNW_004624795:739,821...752,773
Ensembl chrNW_004624795:743,646...752,103
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chrNW_004624786:2,673,285...2,711,432
Ensembl chrNW_004624786:2,672,552...2,710,914
JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chrNW_004624751:254,373...290,218
Ensembl chrNW_004624751:256,305...291,178
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (PMID:19786558) UniProt PMID:19786558 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:24413057) UniProt PMID:24413057 NCBI chrNW_004624893:499,222...512,341
Ensembl chrNW_004624893:498,973...512,443
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:24413057) UniProt PMID:24413057 NCBI chrNW_004624805:594,986...619,115
Ensembl chrNW_004624805:597,406...618,969
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:19,194,469...19,236,518
Ensembl chrNW_004624764:19,194,496...19,238,123
JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:10231394), (PMID:23418588) UniProt PMID:10231394 PMID:23418588 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:24051492) UniProt PMID:24051492 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chrNW_004624766:9,629,951...9,687,772
Ensembl chrNW_004624766:9,629,849...9,668,393
JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chrNW_004624750:25,702,597...25,801,938
Ensembl chrNW_004624750:25,702,630...25,801,618
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chrNW_004624770:11,138,673...11,149,600
Ensembl chrNW_004624770:11,138,652...11,149,600
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chrNW_004624842:5,053,336...5,071,902
Ensembl chrNW_004624842:5,053,280...5,072,679
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:30498428) MGI PMID:30498428 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624850:2,698,806...2,792,194
Ensembl chrNW_004624850:2,699,140...2,795,350
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO (PMID:22678064) MGI PMID:22678064 NCBI chrNW_004624754:19,562,532...20,014,323
Ensembl chrNW_004624754:19,616,547...20,011,989
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12419540) MGI PMID:12419540 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625
JBrowse link
circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pln phospholamban involved_in ISO (PMID:38493225) UniProt PMID:38493225 NCBI chrNW_004624798:11,522,245...11,528,741
Ensembl chrNW_004624798:11,522,269...11,528,775
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in ISO (PMID:29138967) UniProt PMID:29138967 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in ISO (PMID:19940926) BHF-UCL PMID:19940926 NCBI chrNW_004624792:8,029,383...8,087,824
Ensembl chrNW_004624792:8,029,364...8,084,424
JBrowse link
cumulus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624843:4,869,278...4,873,444
Ensembl chrNW_004624843:4,869,614...4,873,448
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:4,974,690...4,993,886
Ensembl chrNW_004624868:4,974,810...4,993,817
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:12451142) MGI PMID:12451142 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004624926:1,326,851...1,335,477
Ensembl chrNW_004624926:1,326,866...1,330,805
JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292) MGI PMID:19217292 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within ISO (PMID:20080691) MGI PMID:20080691 NCBI chrNW_004624792:8,448,245...8,680,845
Ensembl chrNW_004624792:8,448,013...8,681,053
JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (PMID:22920256) MGI PMID:22920256 NCBI chrNW_004624730:14,278,017...14,279,929
Ensembl chrNW_004624730:14,278,020...14,279,496
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (PMID:26392540) UniProt PMID:26392540 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (PMID:18411297) BHF-UCL PMID:18411297 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISO (PMID:23993098) UniProt PMID:23993098 NCBI chrNW_004624908:1,814,079...1,868,717
Ensembl chrNW_004624908:1,814,148...1,866,915
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Fbxl21 Putative F-box/LRR-repeat protein 21 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:11,174,526...11,186,938 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (PMID:23452855), (PMID:23452856), (PMID:23616524) UniProt PMID:23452855 PMID:23452856 PMID:23616524 NCBI chrNW_004624751:23,374,622...23,391,535
Ensembl chrNW_004624751:23,374,702...23,398,727
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (PMID:15741322) MGI PMID:15741322 NCBI chrNW_004624908:673,615...680,443
Ensembl chrNW_004624908:672,916...680,443
JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:26392540), (PMID:30240620), (PMID:31607531) UniProt PMID:26392540 PMID:30240620 PMID:31607531 NCBI chrNW_004624754:13,307,738...13,332,287
Ensembl chrNW_004624754:13,307,738...13,332,287
JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (PMID:30240620) UniProt PMID:30240620 NCBI chrNW_004624755:26,372,040...26,413,464
Ensembl chrNW_004624755:26,372,072...26,413,381
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Per3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22274616) UniProt PMID:22274616 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (PMID:21712997) UniProt PMID:21712997 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (PMID:21712997) UniProt PMID:21712997 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Sik1 salt inducible kinase 1 involved_in ISO (PMID:23993098) UniProt PMID:23993098 NCBI chrNW_004624745:27,529,037...27,539,253
Ensembl chrNW_004624745:27,528,929...27,539,552
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:24051492) UniProt PMID:24051492 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
estrous cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adnp activity dependent neuroprotector homeobox ISO RGD PMID:16023261 RGD:2312777 NCBI chrNW_004624790:4,822,467...4,854,852
Ensembl chrNW_004624790:4,832,494...4,854,845
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:7977723 RGD:8548523 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:18202528 RGD:2306318 NCBI chrNW_004624811:505,297...563,795
Ensembl chrNW_004624811:505,101...563,855
JBrowse link
G Anxa1 annexin A1 ISO RGD PMID:17283243 RGD:2306897 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
JBrowse link
G Azin1 antizyme inhibitor 1 ISO RGD PMID:28315656 RGD:14700804 NCBI chrNW_004624763:19,643,980...19,667,125
Ensembl chrNW_004624763:19,643,980...19,667,125
JBrowse link
G Ca12 carbonic anhydrase 12 ISO RGD PMID:23869188 RGD:155226878 NCBI chrNW_004624781:9,140,753...9,195,651
Ensembl chrNW_004624781:9,140,837...9,196,400
JBrowse link
G Ca2 carbonic anhydrase 2 ISO RGD PMID:23869188 RGD:155226878 NCBI chrNW_004624744:6,168,030...6,183,407
Ensembl chrNW_004624744:6,167,606...6,183,538
JBrowse link
G Cckbr cholecystokinin B receptor ISO RGD PMID:17045752 RGD:2311331 NCBI chrNW_004624817:7,744,422...7,754,870
Ensembl chrNW_004624817:7,743,865...7,755,453
JBrowse link
G Clu clusterin ISO RGD PMID:11149574 RGD:9068389 NCBI chrNW_004624758:22,431,331...22,444,185
Ensembl chrNW_004624758:22,426,918...22,444,357
JBrowse link
G Egr1 early growth response 1 involved_in ISO (PMID:8703054) UniProt PMID:8703054 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IEA
ISO
TreeGrafter
RGD
PMID:22122904 GO_REF:0000118 RGD:9685419 NCBI chrNW_004624763:17,677,825...17,775,284
Ensembl chrNW_004624763:17,677,722...17,765,292
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:11956173 RGD:2290010 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:11854469 RGD:8694160 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:18439600 RGD:2313729 NCBI chrNW_004624812:2,795,961...2,920,263
Ensembl chrNW_004624812:2,795,686...2,920,274
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:9075691 RGD:9685070 NCBI chrNW_004624758:20,447,413...20,451,059
Ensembl chrNW_004624758:20,447,583...20,450,968
JBrowse link
G Has1 hyaluronan synthase 1 ISO RGD PMID:24218629 RGD:9588635 NCBI chrNW_004624832:3,327,626...3,341,928
Ensembl chrNW_004624832:3,329,920...3,336,290
JBrowse link
G Has2 hyaluronan synthase 2 ISO RGD PMID:24218629 RGD:9588635 NCBI chrNW_004624735:33,095,441...33,121,030
Ensembl chrNW_004624735:33,095,515...33,121,237
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9990085 RGD:10059328 NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:17567960 RGD:10046043 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G LOC101701066 cytochrome P450 1B1 ISO RGD PMID:12223220 RGD:7829740 NCBI chrNW_004624738:19,639,215...19,647,807
Ensembl chrNW_004624738:19,638,456...19,647,497
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:22521590 RGD:401976465 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757
JBrowse link
G Mdk midkine involved_in ISO (PMID:17121547) UniProt PMID:17121547 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:8691099 RGD:10043158 NCBI chrNW_004624918:2,228,688...2,239,852 JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO RGD PMID:10070364 RGD:9685349 NCBI chrNW_004624878:345,038...364,986
Ensembl chrNW_004624878:345,038...361,652
JBrowse link
G Muc4 mucin 4, cell surface associated ISO RGD PMID:9618151 RGD:2303752 NCBI chrNW_004624730:61,153,753...61,176,859 JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:15862975 RGD:2306462 NCBI chrNW_004624738:6,770,745...7,054,616
Ensembl chrNW_004624738:6,943,726...7,054,454
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:15862975 RGD:2306462 NCBI chrNW_004624747:23,777,645...23,887,804
Ensembl chrNW_004624747:23,777,325...23,865,804
JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chrNW_004624735:2,301,248...2,325,678
Ensembl chrNW_004624735:2,301,101...2,325,684
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:12710984 RGD:9835032 NCBI chrNW_004624741:29,713,937...29,720,617
Ensembl chrNW_004624741:29,714,477...29,720,716
JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chrNW_004624785:4,147,079...4,195,712
Ensembl chrNW_004624785:4,032,689...4,196,186
JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:12867731 RGD:2304182 NCBI chrNW_004624731:3,367,645...3,384,815
Ensembl chrNW_004624731:3,370,701...3,385,640
JBrowse link
G Pcna proliferating cell nuclear antigen ISO RGD PMID:10856886 RGD:10448987 NCBI chrNW_004624741:6,143,584...6,148,055
Ensembl chrNW_004624741:6,143,332...6,148,898
JBrowse link
G Pgr progesterone receptor ISO RGD PMID:16461543 RGD:7248717 NCBI chrNW_004624878:1,714,196...1,769,302
Ensembl chrNW_004624878:1,714,559...1,762,421
JBrowse link
G Ptn pleiotrophin involved_in ISO (PMID:17121547) RGD
UniProt
PMID:9846168 PMID:17121547 RGD:10044015 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184
JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO RGD PMID:23869188 RGD:155226878 NCBI chrNW_004624730:2,639,940...2,649,358
Ensembl chrNW_004624730:2,640,208...2,649,203
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO RGD PMID:24577155 RGD:9999435 NCBI chrNW_004624745:29,757,267...29,809,607
Ensembl chrNW_004624745:29,757,106...29,806,795
JBrowse link
G Wnt5a Wnt family member 5A ISO RGD PMID:20126574 RGD:2326233 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288
JBrowse link
follicle-stimulating hormone signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chrNW_004624741:28,151,404...28,156,830
Ensembl chrNW_004624741:28,151,643...28,156,828
JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004624817:1,750,448...1,828,399
Ensembl chrNW_004624817:1,750,156...1,823,309
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914
JBrowse link
G Cenpi centromere protein I ISO RGD PMID:7758824 RGD:728588 NCBI chrNW_004624902:1,391,144...1,500,323
Ensembl chrNW_004624814:8,820,811...8,823,072
JBrowse link
G Fshb follicle stimulating hormone subunit beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9020850) MGI
TreeGrafter
PMID:9020850 GO_REF:0000118 NCBI chrNW_004624766:19,328,730...19,332,385
Ensembl chrNW_004624766:19,329,371...19,331,267
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10330114) RGD
MGI
TreeGrafter
PMID:10330114 PMID:12145341 PMID:16598027 PMID:16899567 GO_REF:0000118 RGD:1601255 RGD:1601258 RGD:4140424 NCBI chrNW_004624738:30,170,514...30,369,250
Ensembl chrNW_004624738:30,176,817...30,369,166
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004624767:19,212,218...19,231,218
Ensembl chrNW_004624767:19,210,965...19,231,082
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
generation of ovulation cycle rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15364017) Ensembl
MGI
PMID:15364017 GO_REF:0000107 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
JBrowse link
G Kiss1 KiSS-1 metastasis suppressor ISO RGD PMID:15976058 RGD:2292152 NCBI chrNW_004624807:6,800,144...6,805,555
Ensembl chrNW_004624807:6,803,265...6,805,433
JBrowse link
G Npy5r neuropeptide Y receptor Y5 ISO RGD PMID:12047724 RGD:1625504 NCBI chrNW_004624758:13,518,722...13,521,292
Ensembl chrNW_004624758:13,518,951...13,524,840
JBrowse link
initiation of primordial ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:12855809) MGI PMID:12855809 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Gas2 growth arrest specific 2 acts_upstream_of_or_within ISO (PMID:27734842) MGI PMID:27734842 NCBI chrNW_004624766:13,610,229...13,741,604
Ensembl chrNW_004624766:13,612,702...13,741,606
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:26131556) MGI PMID:26131556 NCBI chrNW_004624795:11,447,941...11,617,312 JBrowse link
G Ciart circadian associated repressor of transcription involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Egr1 early growth response 1 involved_in ISO (PMID:29138967) UniProt PMID:29138967 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:15,349,416...15,892,011
Ensembl chrNW_004624783:15,351,870...15,891,057
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISO (PMID:19036988) UniProt PMID:19036988 NCBI chrNW_004624790:284,586...287,268
Ensembl chrNW_004624790:285,965...286,936
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:17712420) MGI PMID:17712420 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (PMID:24529706) UniProt PMID:24529706 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (PMID:19037247) UniProt PMID:19037247 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Nms neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chrNW_004624749:5,294,551...5,342,904
Ensembl chrNW_004624749:5,331,095...5,342,894
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Pln phospholamban involved_in ISO (PMID:38493225) UniProt PMID:38493225 NCBI chrNW_004624798:11,522,245...11,528,741
Ensembl chrNW_004624798:11,522,269...11,528,775
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:17706614) CACAO PMID:17706614 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:38172607) MGI
Ensembl
PMID:38172607 GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
luteinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn5 calpain 5 ISO RGD PMID:19415717 RGD:2313170 NCBI chrNW_004624863:148,941...202,853
Ensembl chrNW_004624863:148,889...202,952
JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within ISO (PMID:19056881) MGI PMID:19056881 NCBI chrNW_004624746:21,345,304...21,501,542
Ensembl chrNW_004624746:21,345,310...21,503,822
JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO (PMID:16093361) MGI PMID:16093361 NCBI chrNW_004624845:2,972,308...3,055,596
Ensembl chrNW_004624845:3,046,063...3,050,560
JBrowse link
G LOC101702005 aromatase ISO RGD PMID:23183184 RGD:7257725 NCBI chrNW_004624731:9,053,644...9,100,212
Ensembl chrNW_004624731:9,053,803...9,100,212
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chrNW_004624878:71,642...79,660
Ensembl chrNW_004624878:71,642...79,602
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:10537164 RGD:7207086 NCBI chrNW_004624757:1,450,680...1,479,160
Ensembl chrNW_004624757:1,448,698...1,479,255
JBrowse link
G Nr5a1 nuclear receptor subfamily 5 group A member 1 acts_upstream_of_or_within ISO (PMID:15118069) MGI PMID:15118069 NCBI chrNW_004624760:10,603,504...10,626,259
Ensembl chrNW_004624760:10,605,877...10,626,386
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO (PMID:19056881) MGI PMID:19056881 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810
JBrowse link
G Pgr progesterone receptor ISO RGD PMID:8344215 RGD:1601291 NCBI chrNW_004624878:1,714,196...1,769,302
Ensembl chrNW_004624878:1,714,559...1,762,421
JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO (PMID:19056881) MGI PMID:19056881 NCBI chrNW_004624737:24,299,199...24,365,459 JBrowse link
G Ptprn protein tyrosine phosphatase receptor type N involved_in ISO (PMID:16269463) UniProt PMID:16269463 NCBI chrNW_004624823:5,710,669...5,734,739
Ensembl chrNW_004624823:5,710,622...5,729,093
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO (PMID:19056881) MGI PMID:19056881 NCBI chrNW_004624754:4,844,472...4,889,006
Ensembl chrNW_004624754:4,844,552...4,886,709
JBrowse link
luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 ISO RGD PMID:16940287 RGD:4107077 NCBI chrNW_004624800:11,451,784...11,468,791
Ensembl chrNW_004624800:11,451,038...11,468,205
JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004624802:10,437,998...10,443,278 JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO RGD PMID:21209419 RGD:155663486 NCBI chrNW_004624804:8,179,729...8,189,001
Ensembl chrNW_004624804:8,179,731...8,191,284
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004624760:9,986,529...9,991,261
Ensembl chrNW_004624760:9,986,656...9,995,252
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chrNW_004624878:71,642...79,660
Ensembl chrNW_004624878:71,642...79,602
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:10537164 RGD:7207086 NCBI chrNW_004624918:2,228,688...2,239,852 JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chrNW_004624802:12,176,406...12,182,128
Ensembl chrNW_004624802:12,175,989...12,181,578
JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:21209419 RGD:155663486 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Notch4 notch receptor 4 ISO RGD PMID:21209419 RGD:155663486 NCBI chrNW_004624754:24,108,661...24,128,053 JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:11444430 RGD:1642472 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK interacting pacemaker involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624734:24,767,952...24,787,781
Ensembl chrNW_004624734:24,766,660...24,782,103
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:17310242)
(PMID:19605937)
UniProt PMID:17310242 PMID:19605937 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (PMID:19605937) UniProt PMID:19605937 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) UniProt PMID:25936801 NCBI chrNW_004624883:2,976,237...2,980,477 JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:19605937) UniProt PMID:19605937 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:17,834,268...17,911,886
Ensembl chrNW_004624758:17,834,191...17,902,575
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:21680841) UniProt PMID:21680841 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:21680841) UniProt PMID:21680841 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049
JBrowse link
negative regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp53 tumor protein p53 involved_in ISO (PMID:18703674) AgBase PMID:18703674 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp15 bone morphogenetic protein 15 involved_in ISO (PMID:24313324) AgBase PMID:24313324 NCBI chrNW_004624893:3,014,535...3,020,862
Ensembl chrNW_004624893:3,014,989...3,021,746
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO (PMID:11416163) UniProt PMID:11416163 NCBI chrNW_004624757:22,697,639...23,142,209
Ensembl chrNW_004624757:22,955,666...23,142,499
JBrowse link
G Ereg epiregulin involved_in ISO PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chrNW_004624730:1,339,017...1,353,869
Ensembl chrNW_004624730:1,339,518...1,353,429
JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) AgBase PMID:24313324 NCBI chrNW_004624733:39,235,128...39,240,557
Ensembl chrNW_004624733:39,237,296...39,240,206
JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (PMID:17675295) MGI PMID:17675295 NCBI chrNW_004624730:35,125,536...35,131,645
Ensembl chrNW_004624730:35,125,605...35,131,367
JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in ISO (PMID:26468290) UniProt PMID:26468290 NCBI chrNW_004624866:5,706,483...5,758,666
Ensembl chrNW_004624866:5,706,850...5,728,771
JBrowse link
ovarian follicle rupture term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:11384650) MGI PMID:11384650 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Edn2 endothelin 2 ISO RGD PMID:16410304 RGD:1581792 NCBI chrNW_004624892:861,976...879,044
Ensembl chrNW_004624892:870,259...877,387
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:3,389,486...3,469,599
Ensembl chrNW_004624745:3,392,572...3,468,576
JBrowse link
ovulation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18787040) MGI PMID:18787040 NCBI chrNW_004624907:76,236...106,765
Ensembl chrNW_004624907:77,806...106,228
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO RGD PMID:15283681 RGD:2289021 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO (PMID:11416163) UniProt PMID:11416163 NCBI chrNW_004624757:22,697,639...23,142,209
Ensembl chrNW_004624757:22,955,666...23,142,499
JBrowse link
G Chga chromogranin A ISO RGD PMID:12873792 RGD:6907048 NCBI chrNW_004624734:9,405,121...9,416,774
Ensembl chrNW_004624734:9,404,916...9,416,902
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1400473) Ensembl
MGI
PMID:1400473 GO_REF:0000107 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:11796513 RGD:70386 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:16461545 RGD:1600349 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:16226387 RGD:6480231 NCBI chrNW_004624761:19,595,802...20,019,368
Ensembl chrNW_004624761:19,600,946...20,017,278
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:16672174 RGD:1599845 NCBI chrNW_004624758:20,447,413...20,451,059
Ensembl chrNW_004624758:20,447,583...20,450,968
JBrowse link
G Nhlh2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (PMID:15465527) MGI PMID:15465527 NCBI chrNW_004624772:11,609,825...11,614,937
Ensembl chrNW_004624772:11,611,342...11,613,835
JBrowse link
G Prl prolactin ISO RGD PMID:17499646 RGD:1642571 NCBI chrNW_004624756:4,585,542...4,593,285 JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:23466670 RGD:8590225 NCBI chrNW_004624786:4,487,005...4,497,706
Ensembl chrNW_004624786:4,486,978...4,497,585
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:12493716 RGD:1302332 NCBI chrNW_004624956:331,275...341,561
Ensembl chrNW_004624956:330,327...337,299
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO (PMID:18787040) MGI PMID:18787040 NCBI chrNW_004624804:8,711,487...8,729,025
Ensembl chrNW_004624804:8,710,821...8,728,072
JBrowse link
ovulation cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:16400681 RGD:5133250 NCBI chrNW_004624859:5,452,694...5,495,840 JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:11089565) MGI PMID:11089565 NCBI chrNW_004624738:30,170,514...30,369,250
Ensembl chrNW_004624738:30,176,817...30,369,166
JBrowse link
G Glrx glutaredoxin ISO RGD PMID:15956334 RGD:9686044 NCBI chrNW_004624743:14,443,394...14,451,561
Ensembl chrNW_004624743:14,442,803...14,451,975
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11145748) MGI
TreeGrafter
PMID:11145748 GO_REF:0000118 NCBI chrNW_004624738:29,902,364...29,967,384
Ensembl chrNW_004624738:29,903,571...29,966,915
JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 ISO RGD PMID:11328854 RGD:7495835 NCBI chrNW_004624870:4,224,108...4,420,217
Ensembl chrNW_004624870:4,287,835...4,416,559
JBrowse link
G Mstn myostatin ISO RGD PMID:18845635 RGD:2303546 NCBI chrNW_004624854:5,893,051...5,899,380
Ensembl chrNW_004624854:5,892,938...5,899,473
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9618561 RGD:2302425 NCBI chrNW_004624743:20,834,664...21,178,933
Ensembl chrNW_004624743:20,988,916...21,178,933
JBrowse link
ovulation from ovarian follicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 acts_upstream_of_or_within ISO (PMID:14668204) MGI PMID:14668204 NCBI chrNW_004624745:14,802,703...14,811,568
Ensembl chrNW_004624745:14,802,371...14,811,203
JBrowse link
G Afp alpha fetoprotein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12297623) Ensembl
MGI
PMID:12297623 GO_REF:0000107 NCBI chrNW_004624735:34,072,257...34,092,540
Ensembl chrNW_004624735:34,072,192...34,092,604
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:12855809) MGI PMID:12855809 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Lep leptin ISO RGD PMID:17071778 RGD:1582677 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727
JBrowse link
G Lepr leptin receptor ISO RGD PMID:12959975 RGD:1582680 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049
JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chrNW_004624802:12,176,406...12,182,128
Ensembl chrNW_004624802:12,175,989...12,181,578
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:14668206 RGD:1582606 NCBI chrNW_004624757:1,450,680...1,479,160
Ensembl chrNW_004624757:1,448,698...1,479,255
JBrowse link
G Nos2 nitric oxide synthase 2 NOT|acts_upstream_of_or_within ISO (PMID:11779605) MGI PMID:11779605 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Nos3 nitric oxide synthase 3 acts_upstream_of_or_within ISO (PMID:11779605) MGI PMID:11779605 NCBI chrNW_004624800:5,600,215...5,619,020
Ensembl chrNW_004624800:5,600,212...5,619,004
JBrowse link
G Pgr progesterone receptor acts_upstream_of_or_within ISO (PMID:12897242) MGI PMID:12897242 NCBI chrNW_004624878:1,714,196...1,769,302
Ensembl chrNW_004624878:1,714,559...1,762,421
JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:10189070 RGD:1642477 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286
JBrowse link
G Sirt1 sirtuin 1 acts_upstream_of_or_within ISO (PMID:12482959) MGI PMID:12482959 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
positive regulation of antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:15944932 RGD:10003098 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445
JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in ISO (PMID:18420282), (PMID:20382503) UniProt PMID:18420282 PMID:20382503 NCBI chrNW_004624740:15,037,818...15,044,207
Ensembl chrNW_004624740:15,037,943...15,044,193
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:18782782) UniProt PMID:18782782 NCBI chrNW_004624831:868,417...1,065,591
Ensembl chrNW_004624831:868,563...1,060,248
JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:22653727)
(PMID:12738229), (PMID:23229515)
ComplexPortal PMID:12738229 PMID:22653727 PMID:23229515 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:18782782) UniProt PMID:18782782 NCBI chrNW_004624733:17,985,546...18,121,398 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:31294688) UniProt PMID:31294688 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chrNW_004624735:37,676,400...37,690,449 JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (PMID:22356123) UniProt PMID:22356123 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (PMID:22753030) UniProt PMID:22753030 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (PMID:22753030) UniProt PMID:22753030 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:19,194,469...19,236,518
Ensembl chrNW_004624764:19,194,496...19,238,123
JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chrNW_004624735:34,105,237...34,123,479
Ensembl chrNW_004624735:34,104,537...34,123,624
JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chrNW_004624783:200,935...214,453
Ensembl chrNW_004624783:200,940...214,373
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chrNW_004624735:37,676,400...37,690,449 JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chrNW_004624848:3,049,009...3,054,548
Ensembl chrNW_004624848:3,048,413...3,054,495
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Pmch pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chrNW_004624750:6,109,542...6,110,834
Ensembl chrNW_004624750:6,109,284...6,111,547
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004624747:9,846,254...9,860,938
Ensembl chrNW_004624747:9,851,153...9,860,094
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (PMID:23716671) UniProt PMID:23716671 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nps neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chrNW_004624737:19,447,495...19,451,005 JBrowse link
positive regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 ISO RGD PMID:25120590 RGD:13204819 NCBI chrNW_004624818:1,041,371...1,065,061
Ensembl chrNW_004624818:1,041,369...1,065,023
JBrowse link
G Retn resistin ISO RGD PMID:21239528 RGD:7207233 NCBI chrNW_004624828:735,562...737,166
Ensembl chrNW_004624828:735,503...737,166
JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone ISO RGD PMID:11133686 RGD:2315649 NCBI chrNW_004624828:6,635,192...6,638,104
Ensembl chrNW_004624828:6,631,420...6,637,732
JBrowse link
G Gpr149 G protein-coupled receptor 149 acts_upstream_of_or_within ISO (PMID:19887567) MGI PMID:19887567 NCBI chrNW_004624730:31,921,433...31,999,075
Ensembl chrNW_004624730:31,921,426...31,998,801
JBrowse link
G Znf830 zinc finger protein 830 involved_in ISO (PMID:25168238) UniProt PMID:25168238 NCBI chrNW_004624875:2,853,426...2,854,925
Ensembl chrNW_004624875:2,853,472...2,854,572
JBrowse link
primary ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:12801993) MGI PMID:12801993 NCBI chrNW_004624738:30,170,514...30,369,250
Ensembl chrNW_004624738:30,176,817...30,369,166
JBrowse link
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 acts_upstream_of_or_within ISO (PMID:18753606) MGI PMID:18753606 NCBI chrNW_004624776:1,192,539...1,273,346
Ensembl chrNW_004624776:1,192,573...1,269,672
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:22905678 RGD:13210788 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132
JBrowse link
progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO (PMID:16093361) MGI PMID:16093361 NCBI chrNW_004624845:2,972,308...3,055,596
Ensembl chrNW_004624845:3,046,063...3,050,560
JBrowse link
G Inhba inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:19,458,835...19,482,570
Ensembl chrNW_004624740:19,464,289...19,482,888
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (PMID:24048828) UniProt PMID:24048828 NCBI chrNW_004624740:6,915,445...7,003,299
Ensembl chrNW_004624740:6,922,879...7,003,658
JBrowse link
G Atg7 autophagy related 7 involved_in ISO (PMID:29937374) UniProt PMID:29937374 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (PMID:30012868) UniProt PMID:30012868 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) UniProt PMID:15917222 NCBI chrNW_004624831:868,417...1,065,591
Ensembl chrNW_004624831:868,563...1,060,248
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) UniProt PMID:23398316 NCBI chrNW_004624758:18,106,621...18,120,910
Ensembl chrNW_004624758:18,106,606...18,120,907
JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in ISO (PMID:27238018) UniProt PMID:27238018 NCBI chrNW_004624791:2,891,239...2,915,001 JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:30012868) UniProt PMID:30012868 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:23575670)
(PMID:10217146), (PMID:19833968), (PMID:21236481), (PMID:23616524), (PMID:26431207)
UniProt PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (PMID:23575670)
(PMID:10217146), (PMID:23616524)
UniProt PMID:10217146 PMID:23575670 PMID:23616524 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (PMID:19414593), (PMID:21930935) UniProt PMID:19414593 PMID:21930935 NCBI chrNW_004624801:11,031,102...11,074,100
Ensembl chrNW_004624801:11,032,021...11,058,551
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:26431207) UniProt PMID:26431207 NCBI chrNW_004624926:871,003...893,902
Ensembl chrNW_004624926:871,000...897,777
JBrowse link
G Drd4 dopamine receptor D4 involved_in ISO (PMID:24048828) UniProt PMID:24048828 NCBI chrNW_004624766:21,834,093...21,837,314
Ensembl chrNW_004624766:21,834,169...21,836,710
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16717091) UniProt PMID:16717091 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (PMID:17463251)
(PMID:17462724), (PMID:17463252), (PMID:23616524)
UniProt PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 NCBI chrNW_004624751:23,374,622...23,391,535
Ensembl chrNW_004624751:23,374,702...23,398,727
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:27238018) UniProt PMID:27238018 NCBI chrNW_004624858:3,778,842...3,974,351
Ensembl chrNW_004624858:3,775,795...3,873,336
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:28556462) UniProt PMID:28556462 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO (PMID:26776516) UniProt PMID:26776516 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004624767:19,247,009...19,365,520
Ensembl chrNW_004624767:19,248,430...19,364,793
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chrNW_004624763:19,582,019...19,592,447
Ensembl chrNW_004624763:19,581,730...19,587,730
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624981:53,502...229,889
Ensembl chrNW_004624981:222,344...233,078
JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (PMID:22208286) UniProt PMID:22208286 NCBI chrNW_004624768:613,396...618,222
Ensembl chrNW_004624768:613,243...618,303
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chrNW_004624733:42,998,948...43,048,392
Ensembl chrNW_004624733:42,999,339...43,048,285
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:29750810) UniProt PMID:29750810 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Noct nocturnin involved_in ISO (PMID:22073225) UniProt PMID:22073225 NCBI chrNW_004624777:19,379,447...19,383,477 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO (PMID:22966205) UniProt PMID:22966205 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:24048828) UniProt PMID:24048828 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Opn4 opsin 4 involved_in ISO (PMID:12808468) UniProt PMID:12808468 NCBI chrNW_004624841:472,053...483,623
Ensembl chrNW_004624841:474,035...482,475
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (PMID:11395012) UniProt PMID:11395012 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:11395012), (PMID:19917250) UniProt PMID:11395012 PMID:19917250 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22274616) UniProt PMID:22274616 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:19041764) UniProt PMID:19041764 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (PMID:17476214) UniProt PMID:17476214 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (PMID:21930935)
(PMID:21712997)
UniProt PMID:21712997 PMID:21930935 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (PMID:19833968) UniProt PMID:19833968 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (PMID:19833968) UniProt PMID:19833968 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142
JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (PMID:23185022) UniProt PMID:23185022 NCBI chrNW_004624832:2,548,286...2,566,365
Ensembl chrNW_004624832:2,547,535...2,566,402
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:24158435) UniProt PMID:24158435 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:23723244) UniProt PMID:23723244 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Pspc1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624776:17,906,700...17,978,885
Ensembl chrNW_004624776:17,906,063...17,978,098
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836) UniProt PMID:23172836 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (PMID:23172836) UniProt PMID:23172836 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorb RAR related orphan receptor B involved_in ISO (PMID:17303680) UniProt PMID:17303680 NCBI chrNW_004624811:2,076,474...2,281,933
Ensembl chrNW_004624811:2,076,437...2,277,040
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:22966205) UniProt PMID:22966205 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISO (PMID:26392558) UniProt PMID:26392558 NCBI chrNW_004624730:28,159,096...28,178,832
Ensembl chrNW_004624730:28,158,750...28,178,810
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:30782483) UniProt PMID:30782483 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) UniProt PMID:26392558 NCBI chrNW_004624730:17,692,124...17,774,321
Ensembl chrNW_004624730:17,692,959...17,774,497
JBrowse link
G Srrd SRR1 domain containing involved_in ISO (PMID:28802827) UniProt PMID:28802827 NCBI chrNW_004624747:3,033,705...3,041,667
Ensembl chrNW_004624747:3,033,745...3,041,090
JBrowse link
G Tardbp TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:1,759,496...1,789,806
Ensembl chrNW_004624818:1,759,497...1,789,813
JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:23418588) UniProt PMID:23418588 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:27123980) UniProt PMID:27123980 NCBI chrNW_004624824:6,277,111...6,338,051
Ensembl chrNW_004624824:6,276,354...6,338,227
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
G Il6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO (PMID:17925011) UniProt PMID:17925011 NCBI chrNW_004624772:6,298,113...6,311,614
Ensembl chrNW_004624772:6,305,550...6,309,906
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:34798058) UniProt PMID:34798058 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISO (PMID:25083013) UniProt PMID:25083013 NCBI chrNW_004624737:32,536,096...32,563,721
Ensembl chrNW_004624737:32,541,598...32,563,424
JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chrNW_004624733:40,039,127...40,041,294
Ensembl chrNW_004624733:40,039,414...40,041,294
JBrowse link
G Drd3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chrNW_004624731:34,318,733...34,369,111
Ensembl chrNW_004624731:34,319,130...34,363,184
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:32893934) UniProt PMID:32893934 NCBI chrNW_004624730:58,679,945...58,743,688
Ensembl chrNW_004624730:58,680,030...58,743,229
JBrowse link
G Nmu neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chrNW_004624761:13,823,752...13,850,756
Ensembl chrNW_004624761:13,824,144...13,848,219
JBrowse link
G Per3 period circadian regulator 3 involved_in ISO (PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
(PMID:21957163)
UniProt PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chrNW_004624832:7,220,739...7,225,146
Ensembl chrNW_004624832:7,221,064...7,224,615
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISO (PMID:10781097) UniProt PMID:10781097 NCBI chrNW_004624760:920,292...923,174
Ensembl chrNW_004624760:920,877...923,283
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chrNW_004624850:2,698,806...2,792,194
Ensembl chrNW_004624850:2,699,140...2,795,350
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:29750810) UniProt PMID:29750810 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chrNW_004624741:29,713,937...29,720,617
Ensembl chrNW_004624741:29,714,477...29,720,716
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) UniProt PMID:26232227 NCBI chrNW_004624746:15,094,890...15,330,653
Ensembl chrNW_004624746:15,098,960...15,254,127
JBrowse link
regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:20660033)
(PMID:12050262)
UniProt PMID:12050262 PMID:20660033 NCBI chrNW_004624733:39,235,128...39,240,557
Ensembl chrNW_004624733:39,237,296...39,240,206
JBrowse link
ultradian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enox1 ecto-NOX disulfide-thiol exchanger 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624748:11,308,948...11,887,738
Ensembl chrNW_004624748:11,687,743...11,888,126
JBrowse link
G Enox2 ecto-NOX disulfide-thiol exchanger 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624797:9,921,112...10,285,984
Ensembl chrNW_004624797:9,947,713...10,036,735
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17637
    rhythmic process 384
      circadian rhythm + 258
      ovulation cycle + 122
      ovulation cycle process + 76
      ultradian rhythm + 2
paths to the root