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ONTOLOGY REPORT - ANNOTATIONS


Term:coated membrane
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Accession:GO:0048475 term browser browse the term
Definition:A single or double lipid bilayer with any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes.



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AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of ISO
IBA
(PMID:15758025)
PMID:21873635
RGD PMID:15758025 PMID:21873635 RGD:13792537 NCBI chr14:94,871,429...94,925,625
Ensembl chr14:94,871,429...94,925,376
JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:37,744,666...37,831,131
Ensembl chr19:37,744,633...37,829,167
JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,571,571...28,579,421
Ensembl chr15:28,571,568...28,589,004
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,625,267...19,635,792
Ensembl chr12:19,625,332...19,756,713
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:80,950,402...81,039,685
Ensembl chr 9:80,950,715...81,009,798
JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:131,882,866...131,889,662
Ensembl chr 6:131,882,609...131,889,662
JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14724281 PMID:21873635 RGD:2317430, RGD:13792537 NCBI chr16:7,713,630...7,716,491 JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO
IBA
(PMID:23676497)
(MGI:5514106|PMID:23676497)
PMID:21873635
RGD PMID:23676497 PMID:21873635 MGI:5514106, RGD:13792537 NCBI chr 1:95,384,303...95,414,249
Ensembl chr 1:95,384,309...95,414,147
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO
IEA
IMP
IBA
(PMID:23676497)
GO_REF:0000117
(MGI:5514106|PMID:23676497)
PMID:12086608
PMID:21873635
RGD
UniProt
PMID:23676497 PMID:12086608 PMID:21873635 GO_REF:0000117 MGI:5514106, RGD:12793054, RGD:13792537 NCBI chr 1:196,652,315...196,725,609
Ensembl chr 1:196,652,337...196,725,603
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608), (PMID:23676497)
(MGI:5514106|PMID:23676497)
RGD PMID:12086608 PMID:23676497 MGI:5514106 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IDA
ISO
IBA
PMID:12086608
(MGI:5514106|PMID:23676497)
PMID:21873635
(PMID:23676497)
RGD PMID:23676497 PMID:12086608 PMID:21873635 MGI:5514106, RGD:12793054, RGD:13792537 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IDA
IEA
ISO
GO_REF:0000002
PMID:2040623
(MGI:5882913|PMID:12086608)
InterPro
RGD
PMID:12086608 PMID:7593184 PMID:2040623 GO_REF:0000002 MGI:5882913, RGD:2306270, RGD:727584 NCBI chr 1:77,417,496...77,428,903
Ensembl chr 1:77,417,477...77,428,905
JBrowse link
G Btbd8 BTB domain containing 8 colocalizes_with
part_of
IDA
ISO
PMID:29262337
(MGI:6104538|PMID:29262337)
(PMID:29262337)
RGD PMID:29262337 PMID:29262337 MGI:6104538, RGD:13601995 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (MGI:4887327|PMID:17626015) RGD PMID:17626015 MGI:4887327 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISS
ISO
IEA
PMID:17626015
(MGI:4887327|PMID:17626015)
GO_REF:0000107
RGD
Ensembl
PMID:17626015 PMID:17626015 GO_REF:0000107 MGI:4887327, RGD:8554282 NCBI chr 5:117,536,752...117,734,593
Ensembl chr 5:117,537,746...117,734,575
JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14724281 PMID:21873635 RGD:2317430, RGD:13792537 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Tbc1d5 TBC1 domain family, member 5 colocalizes_with ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
JBrowse link
AP-3 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of ISO (PMID:9118953) RGD PMID:9118953 NCBI chr18:39,462,727...39,531,626
Ensembl chr18:39,462,765...39,531,622
JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 part_of ISO (PMID:9118953) RGD PMID:9118953 NCBI chr 1:133,818,825...133,859,269
Ensembl chr 1:133,818,825...133,859,322
JBrowse link
G ENSRNOG00000062839 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr19:29,819,856...29,820,542 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 8:44,683,768...44,698,572
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes colocalizes_with
part_of
ISO
IEA
(PMID:21411634)
GO_REF:0000107
RGD
Ensembl
PMID:21411634 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
JBrowse link
G Vps39 VPS39 subunit of HOPS complex part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
G Vps41 VPS41 subunit of HOPS complex colocalizes_with IDA
ISO
PMID:24210660
(PMID:21411634)
RGD PMID:21411634 PMID:24210660 RGD:10054072 NCBI chr17:46,063,124...46,227,582
Ensembl chr17:46,063,124...46,227,791
JBrowse link
AP-4 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 2:191,318,485...191,330,531
Ensembl chr 2:191,318,482...191,330,531
JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of ISO
IBA
(PMID:10066790)
PMID:21873635
RGD PMID:10066790 PMID:21873635 RGD:13792537 NCBI chr 3:114,272,997...114,339,484
Ensembl chr 3:114,272,956...114,336,752
JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of ISS
ISO
GO_REF:0000024
(PMID:10066790), (PMID:11802162), (PMID:29180427)
UniProt
RGD
PMID:10066790 PMID:11802162 PMID:29180427 GO_REF:0000024 NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026
JBrowse link
G Ap4s1 adaptor related protein complex 4 subunit sigma 1 part_of ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 6:69,133,403...69,174,488
Ensembl chr 6:69,133,373...69,175,496
JBrowse link
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein colocalizes_with IDA
ISO
PMID:22472443
(PMID:22472443), (PMID:26756312)
RGD PMID:22472443 PMID:26756312 PMID:22472443 RGD:11250428 NCBI chr10:105,373,939...105,381,310
Ensembl chr10:105,373,941...105,382,266
JBrowse link
AP-5 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511
JBrowse link
AP-type membrane coat adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1m2 adaptor related protein complex 1 subunit mu 2 part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:19,838,579...19,856,560
Ensembl chr 8:19,838,580...19,856,482
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of TAS PMID:8262066 PINC PMID:8262066 RGD:2306271 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap5b1 adaptor related protein complex 5 subunit beta 1 part_of ISO
ISS
IBA
(PMID:22022230)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22022230 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:202,876,272...202,880,303
Ensembl chr 1:202,876,272...202,880,289
JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 part_of ISO
ISS
IBA
(PMID:22022230)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22022230 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:22,355,478...22,385,222
Ensembl chr15:22,355,500...22,377,750
JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 part_of IBA
ISO
PMID:21873635
(PMID:22022230)
RGD PMID:22022230 PMID:21873635 RGD:13792537 NCBI chr 3:118,429,618...118,436,256
Ensembl chr 3:118,429,637...118,432,926
JBrowse link
clathrin adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778
JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 part_of IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr16:17,586,886...17,602,410
Ensembl chr16:17,584,730...17,602,403
JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 part_of IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 8:19,838,579...19,856,560
Ensembl chr 8:19,838,580...19,856,482
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO
IEA
(PMID:8262066)
GO_REF:0000002
RGD
InterPro
PMID:8262066 GO_REF:0000002 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap2b1-ps1 adaptor related protein complex 2 subunit beta 1, pseudogene 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:34,292,190...34,295,856
Ensembl chr 1:34,291,930...34,295,752
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 part_of IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844
JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 part_of IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr16:69,217,526...69,237,372
Ensembl chr16:69,217,633...69,235,431
JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:191,318,485...191,330,531
Ensembl chr 2:191,318,482...191,330,531
JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026
JBrowse link
G ENSRNOG00000064118 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr17:40,780,449...40,781,959 JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 IDA RGD PMID:12564930 RGD:727577 NCBI chr 6:58,489,060...58,520,322
Ensembl chr 6:58,489,010...58,520,330
JBrowse link
clathrin coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IC PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IDA PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Clta clathrin, light chain A part_of IDA
ISO
(PMID:11756460) RGD PMID:11756460 PMID:1490999 PMID:17978091 RGD:2303177, RGD:2303184 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B IDA RGD PMID:1490999 PMID:17978091 RGD:2303177, RGD:2303184 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Cltc clathrin heavy chain part_of TAS
ISO
IDA
(PMID:11756460) RGD PMID:11756460 PMID:3480512 PMID:17978091 PMID:1490999 RGD:69810, RGD:2303184, RGD:2303177 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:2971973 RGD:2303173 NCBI chr 1:47,979,109...48,067,501
Ensembl chr 1:47,979,109...48,067,501
JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 part_of ISO (PMID:24855057) RGD PMID:24855057 NCBI chr 9:23,830,185...24,395,984
Ensembl chr 9:23,833,087...24,394,704
JBrowse link
G Pank1 pantothenate kinase 1 part_of ISO (MGI:5484508|PMID:23152917) RGD PMID:23152917 MGI:5484508 NCBI chr 1:232,324,718...232,395,445
Ensembl chr 1:232,328,430...232,396,829
JBrowse link
clathrin coat of coated pit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of NAS
IEA
GO_REF:0000002 InterPro
RGD
PMID:3563513 GO_REF:0000002, RGD:70686 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B part_of NAS PMID:3563513 RGD
UniProt
PMID:3563513 PMID:3563513 RGD:70686, RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Dab2 DAB adaptor protein 2 part_of ISO (MGI:5442517|PMID:11247302) RGD PMID:11247302 MGI:5442517 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of IBA
ISO
PMID:21873635
(MGI:5305417|PMID:18434600)
RGD PMID:18434600 PMID:21873635 MGI:5305417, RGD:13792537 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 part_of IBA
ISO
PMID:21873635
(MGI:5305417|PMID:18434600)
RGD PMID:18434600 PMID:21873635 MGI:5305417, RGD:13792537 NCBI chr16:17,426,345...17,501,677
Ensembl chr16:17,426,421...17,501,677
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein part_of ISO
IEA
(PMID:10436022), (PMID:16262731)
GO_REF:0000107
RGD
Ensembl
PMID:10436022 PMID:16262731 GO_REF:0000107 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Synj1 synaptojanin 1 part_of IDA PMID:9428629 ParkinsonsUK-UCL PMID:9428629 RGD:11059574 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 part_of IDA
IEA
GO_REF:0000002 InterPro
RGD
PMID:10567358 GO_REF:0000002, RGD:708327 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642
JBrowse link
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC105531.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Clta clathrin, light chain A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Dnm1l dynamin 1-like NOT|part_of IDA PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Synrg synergin, gamma part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10477754 PMID:21873635 RGD:631945, RGD:13792537 NCBI chr10:68,848,828...68,931,252
Ensembl chr10:68,849,642...68,931,250
JBrowse link
clathrin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 part_of IDA PMID:11877461 UniProt PMID:11877461 RGD:8553925 NCBI chr 4:119,300,128...119,451,834
Ensembl chr 4:119,295,257...119,450,969
JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 part_of ISO (PMID:21401524) RGD PMID:21401524 NCBI chr 7:110,824,370...110,850,702
Ensembl chr 7:110,824,375...110,850,702
JBrowse link
G Clta clathrin, light chain A part_of ISO (PMID:4066749) RGD PMID:4066749 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltc clathrin heavy chain part_of ISO
IEA
IBA
(PMID:4066749)
GO_REF:0000002
GO_REF:0000107
PMID:21873635
RGD
InterPro
Ensembl
PMID:4066749 PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:13792537 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Sclt1 sodium channel and clathrin linker 1 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 2:124,605,445...124,763,964
Ensembl chr 2:124,605,658...124,764,065
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes colocalizes_with
part_of
ISO
IEA
(PMID:21411634)
GO_REF:0000107
RGD
Ensembl
PMID:21411634 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
JBrowse link
G Vps41 VPS41 subunit of HOPS complex colocalizes_with ISO (PMID:21411634) RGD PMID:21411634 NCBI chr17:46,063,124...46,227,582
Ensembl chr17:46,063,124...46,227,791
JBrowse link
clathrin vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clint1 clathrin interactor 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:30,298,618...30,353,185
Ensembl chr10:30,298,704...30,353,063
JBrowse link
G Clta clathrin, light chain A part_of NAS
IBA
PMID:21873635 RGD
GO_Central
PMID:3563513 PMID:21873635 RGD:70686, RGD:13792537 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B part_of NAS
IBA
PMID:21873635
PMID:3563513
RGD
GO_Central
UniProt
PMID:3563513 PMID:21873635 PMID:3563513 RGD:70686, RGD:13792537, RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Epn1 Epsin 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:68,742,491...68,760,507
Ensembl chr 1:68,742,789...68,758,874
JBrowse link
G Epn2 epsin 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642
JBrowse link
G Epn3 epsin 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:79,438,978...79,449,516
Ensembl chr10:79,438,978...79,447,356
JBrowse link
G Necap1 NECAP endocytosis associated 1 part_of IBA
ISO
PMID:21873635
(MGI:3688370|PMID:14555962)
RGD PMID:14555962 PMID:21873635 MGI:3688370, RGD:13792537 NCBI chr 4:156,103,935...156,119,068
Ensembl chr 4:156,103,988...156,119,068
JBrowse link
G Necap2 NECAP endocytosis associated 2 part_of IBA
ISO
ISS
PMID:21873635
(MGI:3688370|PMID:14555962)
GO_REF:0000024
RGD
UniProt
PMID:14555962 PMID:21873635 GO_REF:0000024 MGI:3688370, RGD:13792537 NCBI chr 5:153,370,338...153,382,753
Ensembl chr 5:153,370,338...153,382,729
JBrowse link
COPI vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Arcn1 archain 1 part_of IBA
IEA
PMID:21873635
GO_REF:0000104
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247
JBrowse link
G Copa COPI coat complex subunit alpha part_of IBA
ISO
PMID:21873635
(PMID:14729954)
RGD PMID:14729954 PMID:21873635 RGD:13792537 NCBI chr13:84,546,483...84,586,879
Ensembl chr13:84,545,943...84,586,874
JBrowse link
G Copb1 COPI coat complex subunit beta 1 part_of IDA
IBA
PMID:1840503
PMID:21873635
UniProt
GO_Central
PMID:1840503 PMID:21873635 RGD:632446, RGD:13792537 NCBI chr 1:168,404,334...168,438,589
Ensembl chr 1:168,404,335...168,438,416
JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IBA
ISO
PMID:21873635
(PMID:14729954), (PMID:8335000)
RGD PMID:8335000 PMID:14729954 PMID:21873635 RGD:13792537 NCBI chr 8:99,161,324...99,183,452
Ensembl chr 8:99,161,350...99,185,197
JBrowse link
G Cope COPI coat complex subunit epsilon part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,114,871...19,125,527
Ensembl chr16:19,114,871...19,128,907
JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:120,366,540...120,392,502
Ensembl chr 4:120,366,542...120,415,616
JBrowse link
G Copg2 COPI coat complex subunit gamma 2 part_of IBA
IEA
ISO
PMID:21873635
GO_REF:0000002
(PMID:11056392), (PMID:14729954)
InterPro
RGD
PMID:11056392 PMID:14729954 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:59,366,086...59,501,591
Ensembl chr 4:59,366,086...59,501,618
JBrowse link
G Copz1 COPI coat complex subunit zeta 1 part_of IBA
ISO
PMID:21873635
(PMID:11056392), (PMID:14729954)
RGD PMID:11056392 PMID:14729954 PMID:21873635 RGD:13792537 NCBI chr 7:134,409,523...134,435,661
Ensembl chr 7:134,409,799...134,435,662
JBrowse link
G Copz2 COPI coat complex subunit zeta 2 part_of IBA
ISO
PMID:21873635
(PMID:14729954)
RGD PMID:14729954 PMID:21873635 RGD:13792537 NCBI chr10:81,832,441...81,845,514
Ensembl chr10:81,832,418...81,845,514
JBrowse link
G Dipk2a divergent protein kinase domain 2A part_of IBA
ISO
PMID:21873635
(PMID:18651652)
RGD PMID:18651652 PMID:21873635 RGD:13792537 NCBI chr 8:95,070,695...95,089,815
Ensembl chr 8:95,030,279...95,089,815
JBrowse link
G ENSRNOG00000068070 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr 5:33,483,760...33,485,045 JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
JBrowse link
G Scyl1 SCY1 like pseudokinase 1 part_of ISO (PMID:18556652)
(MGI:3847866|PMID:18556652)
RGD PMID:18556652 MGI:3847866 NCBI chr 1:203,045,776...203,059,550
Ensembl chr 1:203,045,741...203,059,533
JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 part_of IBA
IDA
PMID:21873635
PMID:15718469
GO_Central
UniProt
PMID:21873635 PMID:15718469 RGD:13792537, RGD:1599272 NCBI chr 8:90,241,516...90,249,429
Ensembl chr 8:90,241,516...90,249,346
JBrowse link
COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl12 kelch-like family member 12 part_of ISO
IEA
ISS
(PMID:27716508)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
JBrowse link
G Pdcd6 programmed cell death 6 part_of ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
JBrowse link
G Pef1 penta-EF hand domain containing 1 part_of ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A part_of ISO (PMID:17499046) RGD PMID:17499046 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,024,443...36,054,067
Ensembl chr10:36,024,382...36,054,066
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of IBA
IEA
ISO
PMID:21873635
GO_REF:0000002
(PMID:17499046)
InterPro
RGD
PMID:17499046 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173
JBrowse link
G Sec13-ps2 SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:967,396...968,674
Ensembl chr18:967,394...968,680
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component part_of IBA
ISO
PMID:21873635
(PMID:17499046)
RGD PMID:17499046 PMID:21873635 RGD:13792537 NCBI chr 6:76,658,793...76,706,125
Ensembl chr 6:76,658,427...76,706,035
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:131,939,011...131,981,489
Ensembl chr 3:131,939,337...131,981,489
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of ISO
IBA
(PMID:17499046)
PMID:21873635
RGD PMID:17499046 PMID:21873635 RGD:13792537 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of ISO
IBA
(PMID:10075675), (PMID:17499046)
PMID:21873635
(MGI:4438817|PMID:19966784)
RGD PMID:10075675 PMID:17499046 PMID:19966784 PMID:21873635 MGI:4438817, RGD:13792537 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of ISO
IBA
(PMID:10075675), (PMID:10329445), (PMID:17499046)
PMID:21873635
RGD PMID:10075675 PMID:10329445 PMID:17499046 PMID:21873635 RGD:13792537 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of ISO
IBA
(PMID:17499046)
PMID:21873635
RGD PMID:17499046 PMID:21873635 RGD:13792537 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000107
(PMID:17499046), (PMID:27716508)
UniProt
Ensembl
RGD
PMID:17499046 PMID:27716508 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557
JBrowse link
membrane coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr 1:95,384,303...95,414,249
Ensembl chr 1:95,384,309...95,414,147
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr 1:196,652,315...196,725,609
Ensembl chr 1:196,652,337...196,725,603
JBrowse link
G Chmp1b charged multivesicular body protein 1B part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
JBrowse link
G Chmp4b charged multivesicular body protein 4B part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Cltc clathrin heavy chain part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:99,161,324...99,183,452
Ensembl chr 8:99,161,350...99,185,197
JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,366,540...120,392,502
Ensembl chr 4:120,366,542...120,415,616
JBrowse link
G Dnm1 dynamin 1 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
JBrowse link
G Synj1 synaptojanin 1 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557
JBrowse link
G Tf transferrin part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20535
    cellular anatomical entity 20289
      membrane 10493
        coated membrane 103
          membrane coat + 103
paths to the root