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ONTOLOGY REPORT - ANNOTATIONS


Term:paraxial mesoderm formation
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Accession:GO:0048341 term browser browse the term
Definition:The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.


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paraxial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4975171 (MGI:1195048|PMID:9441674)
Ensembl
RGD
PMID:9441674 GO_REF:0000107 MGI:1195048 NCBI chr 4:60,549,128...61,358,305
Ensembl chr 4:60,549,197...61,355,994
JBrowse link
G Foxc1 forkhead box C1 involved_in
acts_upstream_of_or_within
ISO (MGI:3047050|PMID:15196959)
MGI:1347481 (MGI:2150572|PMID:11562355)
RGD PMID:11562355 PMID:15196959 MGI:2150572 MGI:3047050 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1347466 (MGI:2150572|PMID:11562355) RGD PMID:11562355 MGI:2150572 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:96770 (MGI:1334099|PMID:10090727) RGD PMID:10090727 MGI:1334099 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (MGI:3609520|PMID:16109169) RGD PMID:16109169 MGI:3609520 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:98504 (MGI:1334099|PMID:10090727)
Ensembl
RGD
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:98958 (MGI:5634837|PMID:25813538) RGD PMID:25813538 MGI:5634837 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101948 (MGI:5634837|PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (MGI:86990|PMID:9106663) RGD PMID:9106663 MGI:86990 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:86727|PMID:9126297) RGD PMID:9126297 MGI:86727 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    developmental process 6765
      anatomical structure formation involved in morphogenesis 1223
        formation of primary germ layer 128
          mesoderm formation 75
            paraxial mesoderm formation 9
              paraxial mesodermal cell differentiation + 2
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6765
      anatomical structure development 6191
        multicellular organism development 5628
          system development 5300
            animal organ development 4060
              mesenchyme development 295
                paraxial mesoderm development 22
                  paraxial mesoderm morphogenesis 13
                    paraxial mesoderm formation 9
                      paraxial mesodermal cell differentiation + 2
paths to the root