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ONTOLOGY REPORT - ANNOTATIONS


Term:clathrin coat assembly
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Accession:GO:0048268 term browser browse the term
Definition:The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
Synonyms:exact_synonym: clathrin cage assembly



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clathrin coat assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 involved_in IDA PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in IDA PMID:8262066 RGD
BHF-UCL
PMID:8262066 PMID:8262066 RGD:2306271, RGD:2306271 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Caly calcyon neuron-specific vesicular protein involved_in ISO
IBA
ISS
(PMID:16595675)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:16595675 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551
JBrowse link
G Clint1 clathrin interactor 1 IMP RGD PMID:12213833 RGD:1303953 NCBI chr10:30,298,618...30,353,185
Ensembl chr10:30,298,704...30,353,063
JBrowse link
G Clta clathrin, light chain A involved_in ISO (PMID:11756460) RGD PMID:11756460 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltc clathrin heavy chain involved_in ISO
IEA
IBA
(PMID:11756460)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
RGD
Ensembl
GO_Central
TreeGrafter
PMID:11756460 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IMP
ISO
(MGI:5442514|PMID:12234931) RGD PMID:12234931 PMID:19000037 MGI:5442514, RGD:7243162 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Epn1 Epsin 1 involved_in IDA PMID:11756460 DisProt PMID:11756460 RGD:12793027 NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:12807910) RGD PMID:12807910 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 involved_in ISO (PMID:20448150), (PMID:32098969) RGD PMID:20448150 PMID:32098969 NCBI chr16:18,413,452...18,430,795
Ensembl chr16:18,413,363...18,435,104
JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:20448150)
UniProt
GO_Central
TreeGrafter
RGD
PMID:20448150 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:30,079,143...30,181,639
Ensembl chr 2:30,080,962...30,181,241
JBrowse link
G Gak cyclin G associated kinase involved_in ISO
IEA
(PMID:16155256)
GO_REF:0000107
RGD
Ensembl
PMID:16155256 GO_REF:0000107 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398
JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
GO_REF:0000033
(PMID:11577110)
(PMID:11889126)
GO_Central
RGD
PMID:11577110 PMID:11889126 PMID:11889126 GO_REF:0000033, RGD:708337 NCBI chr12:21,133,364...21,267,796
Ensembl chr12:21,133,406...21,267,725
JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in ISO
IBA
(MGI:5805370|PMID:11564758)
GO_REF:0000033
RGD
GO_Central
PMID:11564758 GO_REF:0000033 MGI:5805370 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
GO_REF:0000118
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
GO_REF:0000118
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr10:15,601,594...15,661,441
Ensembl chr10:15,601,596...15,661,441
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IDA
IEA
ISO
GO_REF:0000002
GO_REF:0000107
(PMID:16262731)
InterPro
Ensembl
RGD
PMID:16262731 PMID:11190274 GO_REF:0000002 GO_REF:0000107, RGD:1600754 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in ISO
IDA
IEA
(MGI:4418638|PMID:11102472), (MGI:4418641|PMID:10428863), (MGI:4418645|PMID:9045662)
PMID:11756460
GO_REF:0000002
RGD
InterPro
PMID:9045662 PMID:10428863 PMID:11102472 PMID:11756460 GO_REF:0000002 MGI:4418638 MGI:4418641 MGI:4418645, RGD:12793027 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
clathrin coat assembly involved in endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:7539444|PMID:35220002)
UniProt
Ensembl
RGD
PMID:35220002 GO_REF:0000024 GO_REF:0000107 MGI:7539444 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
negative regulation of clathrin coat assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in IMP PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
positive regulation of clathrin coat assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caly calcyon neuron-specific vesicular protein IDA RGD PMID:16595675 RGD:11056251 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551
JBrowse link
G Epn1 Epsin 1 involved_in IMP PMID:11756460 CAFA PMID:11756460 RGD:12793027 NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874
JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in ISO (MGI:5763378|PMID:15533940) RGD PMID:15533940 MGI:5763378 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IMP PMID:11756460 CAFA PMID:11756460 RGD:12793027 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
regulation of clathrin coat assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in ISO (PMID:18489706) RGD PMID:18489706 NCBI chr 5:116,120,069...116,283,448
Ensembl chr 5:116,119,676...116,283,448
JBrowse link
G Gak cyclin G associated kinase involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18489706)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18489706 GO_REF:0000024 GO_REF:0000107 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20328
    cellular process 18788
      cellular component organization or biogenesis 7188
        cellular component organization 6877
          cellular component assembly 3160
            protein-containing complex assembly 1624
              clathrin coat assembly 21
                clathrin coat assembly involved in endocytosis 1
                clathrin coating of Golgi vesicle + 0
                negative regulation of clathrin coat assembly 1
                positive regulation of clathrin coat assembly 4
                regulation of clathrin coat assembly + 7
paths to the root