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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of synaptic plasticity
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Accession:GO:0048167 term browser browse the term
Definition:A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.
Comment:Note that the syntax of the definition of this term is different from the usual regulation syntax because it describes regulation of a trait rather than regulation of a process.


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regulation of synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:11,497,182...11,516,362
Ensembl chr 9:11,497,182...11,516,358 		JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:36,627,791...36,649,013
Ensembl chr13:36,614,498...36,690,936 		JBrowse link
G ALG13 ALG13 UDP-N-acetylglucosaminyltransferase subunit acts_upstream_of_or_within ISO (PMID:30872163) MGI PMID:30872163 NCBI chr  X:84,752,284...84,825,414 JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 acts_upstream_of_or_within ISO (PMID:19208628) MGI PMID:19208628 NCBI chr 9:923,519...992,254
Ensembl chr 9:923,493...981,923 		JBrowse link
G BDNF brain derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:16819522), (PMID:17442827) MGI PMID:16819522 PMID:17442827 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480 		JBrowse link
G BEST1 bestrophin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,468,844...54,483,565
Ensembl chr18:54,468,844...54,480,311 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,367,050...102,384,942
Ensembl chr 1:102,367,581...102,385,466 		JBrowse link
G C26H22orf39 chromosome 26 C22orf39 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,765,870...29,770,079
Ensembl chr26:29,765,936...29,769,471 		JBrowse link
G CALB1 calbindin 1 ISO RGD PMID:15318329 RGD:1358474 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27076424) Ensembl
MGI		 PMID:27076424 GO_REF:0000107 NCBI chr12:15,538,215...15,683,619
Ensembl chr12:15,538,356...15,681,011 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in ISO PMID:18498738 RGD
UniProt		 PMID:11675505 PMID:18498738 RGD:69667 RGD:8553496 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CHRDL1 chordin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:83,816,131...83,936,497
Ensembl chr  X:83,817,880...83,936,949 		JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5521401|PMID:24155305) UniProt PMID:24155305 MGI:5521401 NCBI chr28:6,523,894...6,724,010
Ensembl chr28:6,529,212...6,723,454 		JBrowse link
G CRHR1 corticotropin releasing hormone receptor 1 ISO RGD PMID:17079348 RGD:1626232 NCBI chr 9:9,708,696...9,763,281
Ensembl chr 9:9,714,204...9,763,402 		JBrowse link
G CTNND2 catenin delta 2 acts_upstream_of_or_within ISO (PMID:15380068) MGI PMID:15380068 NCBI chr34:2,521,730...3,438,218
Ensembl chr34:2,521,724...3,437,292 		JBrowse link
G DAG1 dystroglycan 1 acts_upstream_of_or_within ISO (PMID:24753587) MGI PMID:24753587 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,339,037...21,364,224
Ensembl chr 4:21,339,045...21,358,072 		JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:43,004,243...43,544,260
Ensembl chr27:43,038,544...43,678,843 		JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:33,842,753...34,748,038
Ensembl chr20:33,842,753...34,746,491 		JBrowse link
G F2R coagulation factor II thrombin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:29,870,159...29,889,837
Ensembl chr 3:29,872,155...29,889,687 		JBrowse link
G FGF14 fibroblast growth factor 14 acts_upstream_of_or_within ISO PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr22:51,379,799...51,983,662
Ensembl chr22:51,380,788...51,982,849 		JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16819522) Ensembl
MGI		 PMID:16819522 GO_REF:0000107 NCBI chr20:48,144,076...48,155,069
Ensembl chr20:48,150,498...48,157,191 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 involved_in ISO PMID:12536214 UniProt PMID:12536214 RGD:8553676 NCBI chr 4:55,801,269...56,103,383
Ensembl chr 4:55,803,296...56,103,669 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:8980239), (PMID:9246451)
(PMID:15003177), (PMID:8980238)		 MGI PMID:8980238 PMID:8980239 PMID:9246451 PMID:15003177 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO (PMID:16710293)
(PMID:11719203)		 MGI PMID:11719203 PMID:16710293 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680 		JBrowse link
G HRH1 histamine receptor H1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17145090) Ensembl
MGI		 PMID:17145090 GO_REF:0000107 NCBI chr20:7,160,903...7,236,147
Ensembl chr20:7,162,393...7,235,869 		JBrowse link
G HRH2 histamine receptor H2 acts_upstream_of_or_within ISO (PMID:17145090) MGI PMID:17145090 NCBI chr 4:37,333,843...37,407,146
Ensembl chr 4:37,275,852...37,386,072 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:17442827)
(PMID:10196373)		 MGI PMID:10196373 PMID:17442827 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G IGSF11 immunoglobulin superfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:22,641,370...22,825,973
Ensembl chr33:22,641,648...22,840,745 		JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19890013) Ensembl
MGI		 PMID:19890013 GO_REF:0000107 NCBI chr30:8,532,191...8,541,273
Ensembl chr30:8,532,284...8,541,285 		JBrowse link
G JPH3 junctophilin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:65,445,329...65,530,288
Ensembl chr 5:65,451,050...65,530,294 		JBrowse link
G JPH4 junctophilin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17347645) Ensembl
MGI
TreeGrafter		 PMID:17347645 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:3,793,413...3,803,831
Ensembl chr 8:3,794,734...3,802,082 		JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:18483067) MGI PMID:18483067 NCBI chr24:47,060,527...47,089,077
Ensembl chr24:47,060,245...47,089,711 		JBrowse link
G KCNQ3 potassium voltage-gated channel subfamily Q member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18483067) Ensembl
MGI		 PMID:18483067 GO_REF:0000107 NCBI chr13:28,765,472...29,062,371
Ensembl chr13:28,773,738...29,062,370 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:24753587) MGI PMID:24753587 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LOC100856208 angiotensin-converting enzyme-like protein Ace3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:11,523,477...11,537,026 JBrowse link
G LZTS1 leucine zipper tumor suppressor 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15703396 GO_REF:0000118 RGD:1600102 NCBI chr25:36,764,235...36,814,204
Ensembl chr25:36,744,061...36,811,972 		JBrowse link
G MAP1A microtubule associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chr30:10,361,871...10,382,780
Ensembl chr30:10,361,909...10,381,376 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16399702) Ensembl
MGI		 PMID:16399702 GO_REF:0000107 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl GO_REF:0000107
G MEF2C myocyte enhancer factor 2C involved_in ISO (MGI:5559663|PMID:22496871) Alzheimers_University_of_Toronto PMID:22496871 MGI:5559663 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MYO6 myosin VI acts_upstream_of_or_within ISO (PMID:16819522) MGI PMID:16819522 NCBI chr12:37,359,200...37,502,342
Ensembl chr12:37,413,570...37,500,724 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 ISO RGD PMID:12954875 RGD:1580247 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100 		JBrowse link
G NOLC1 nucleolar and coiled-body phosphoprotein 1 acts_upstream_of_or_within ISO (PMID:24794856) MGI PMID:24794856 NCBI chr28:14,686,001...14,699,082
Ensembl chr28:14,686,090...14,697,980 		JBrowse link
G NPAS4 neuronal PAS domain protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,905,614...50,912,119
Ensembl chr18:50,905,611...50,911,086 		JBrowse link
G P2RX3 purinergic receptor P2X 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17074061) Ensembl
MGI		 PMID:17074061 GO_REF:0000107 NCBI chr18:38,773,930...38,801,217
Ensembl chr18:38,772,529...38,802,057 		JBrowse link
G PLAT plasminogen activator, tissue type ISO RGD PMID:12070304 RGD:628337 NCBI chr16:23,469,590...23,496,013 JBrowse link
G PLK2 polo like kinase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:45,359,865...45,365,496
Ensembl chr 2:45,360,374...45,367,441 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15066262)
(PMID:11814648)		 Ensembl
MGI		 PMID:11814648 PMID:15066262 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:15066262) MGI PMID:15066262 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722 		JBrowse link
G PTGER1 prostaglandin E receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:48,156,055...48,159,838
Ensembl chr20:48,157,973...48,159,921 		JBrowse link
G PTN pleiotrophin involved_in ISO (MGI:2136679|PMID:11414790) UniProt PMID:11414790 MGI:2136679 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr15:56,133,094...56,353,609
Ensembl chr15:56,174,578...56,352,569 		JBrowse link
G RARA retinoic acid receptor alpha ISO RGD PMID:18957222 RGD:2314254 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459 		JBrowse link
G RASGRF1 Ras protein specific guanine nucleotide releasing factor 1 involved_in ISO PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 3:57,995,092...58,085,395
Ensembl chr 3:57,995,786...58,085,380 		JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410 		JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:4,928,518...5,499,258
Ensembl chr13:4,927,121...5,496,629 		JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:2,353,876...2,391,742
Ensembl chr15:2,353,693...2,404,431 		JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:32,199,068...32,256,474
Ensembl chr24:32,203,410...32,256,480 		JBrowse link
G SCT secretin involved_in ISS UniProt GO_REF:0000024
G SCTR secretin receptor involved_in ISO (MGI:3690260|PMID:17008357) UniProt PMID:17008357 MGI:3690260 NCBI chr19:30,505,059...30,577,371
Ensembl chr19:30,526,055...30,577,075 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21558424) Ensembl
MGI		 PMID:21558424 GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SIPA1L1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:21382555
PMID:18498738		 RGD
UniProt		 PMID:15703396 PMID:18498738 PMID:21382555 RGD:1600102 RGD:7241548 RGD:8553496 NCBI chr 8:44,916,309...45,260,197
Ensembl chr 8:44,990,495...45,258,614 		JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:8,110,327...8,179,394
Ensembl chr27:8,130,823...8,174,936 		JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in ISO PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr12:2,829,274...2,862,888
Ensembl chr12:2,829,306...2,851,432 		JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:35,347,034...35,442,329
Ensembl chr 3:35,347,064...35,440,256 		JBrowse link
G VGF VGF nerve growth factor inducible involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:8,701,289...8,704,386
Ensembl chr 6:8,700,667...8,704,397 		JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A acts_upstream_of_or_within ISO (PMID:37714309) MGI PMID:37714309 NCBI chr 1:81,191,125...81,426,337
Ensembl chr 1:81,192,349...81,426,322 		JBrowse link
G YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,504,834...7,548,097
Ensembl chr 6:7,507,608...7,532,409 		JBrowse link
G ZZEF1 zinc finger ZZ-type and EF-hand domain containing 1 acts_upstream_of_or_within ISO (PMID:33158444)
(PMID:25709106)		 MGI PMID:25709106 PMID:33158444 NCBI chr 5:30,134,726...30,235,865
Ensembl chr 5:30,135,759...30,235,865 		JBrowse link
induction of synaptic plasticity by chemical substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP1B microtubule associated protein 1B ISO RGD PMID:15374099 RGD:2304033 NCBI chr 2:55,175,000...55,258,160
Ensembl chr 2:55,174,837...55,253,975 		JBrowse link
long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD6 abhydrolase domain containing 6, acylglycerol lipase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20657592) Ensembl
MGI		 PMID:20657592 GO_REF:0000107 NCBI chr20:32,301,120...32,331,030
Ensembl chr20:32,302,104...32,330,998 		JBrowse link
G ADORA1 adenosine A1 receptor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:24259587) Ensembl
MGI		 PMID:24259587 GO_REF:0000107 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
G ARF1 ADP ribosylation factor 1 involved_in ISO PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chr14:835,476...836,424
Ensembl chr14:835,476...836,424 		JBrowse link
G CD38 CD38 molecule ISO RGD PMID:10097163 RGD:2307271 NCBI chr 3:64,529,129...64,577,755
Ensembl chr 3:64,529,721...64,578,099 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:14981263) MGI PMID:14981263 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD5 dopamine receptor D5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:13679419) Ensembl
MGI		 PMID:13679419 GO_REF:0000107 NCBI chr 3:69,621,187...69,623,522
Ensembl chr 3:69,621,734...69,623,893 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24259587) Ensembl
MGI		 PMID:24259587 GO_REF:0000107 NCBI chr 4:55,801,269...56,103,383
Ensembl chr 4:55,803,296...56,103,669 		JBrowse link
G GRID2IP Grid2 interacting protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18509461) Ensembl
MGI		 PMID:18509461 GO_REF:0000107 NCBI chr 6:11,834,841...11,860,326
Ensembl chr 6:11,835,961...11,870,109 		JBrowse link
G GRM2 glutamate metabotropic receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8662555) Ensembl
MGI		 PMID:8662555 GO_REF:0000107 NCBI chr20:37,915,178...37,926,276
Ensembl chr20:37,915,665...37,924,296 		JBrowse link
G MGLL monoglyceride lipase acts_upstream_of_or_within ISO (PMID:20657592) MGI PMID:20657592 NCBI chr20:1,765,650...1,880,710
Ensembl chr20:1,766,216...1,943,588 		JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISO PMID:21252856 UniProt PMID:21252856 RGD:8554238 NCBI chr10:26,595,301...26,614,170
Ensembl chr10:26,595,768...26,613,756 		JBrowse link
G PLK2 polo like kinase 2 involved_in ISO PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 2:45,359,865...45,365,496
Ensembl chr 2:45,360,374...45,367,441 		JBrowse link
G PRRT1 proline rich transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,545,384...1,549,015
Ensembl chr12:1,542,789...1,548,964 		JBrowse link
G PTEN phosphatase and tensin homolog ISO NMDA receptor-dependent RGD PMID:20628354 RGD:4144068 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta ISO RGD PMID:20826662 RGD:10041066 NCBI chr25:30,137,546...30,264,221
Ensembl chr25:30,138,209...30,264,133 		JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO (MGI:5432970|PMID:22699620) BHF-UCL PMID:22699620 MGI:5432970 NCBI chr18:47,477,625...47,915,557
Ensembl chr18:47,635,788...47,912,117 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SLC24A2 solute carrier family 24 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407245) Ensembl
MGI		 PMID:16407245 GO_REF:0000107 NCBI chr11:39,273,285...39,521,223
Ensembl chr11:39,278,370...39,519,222 		JBrowse link
G SORCS2 sortilin related VPS10 domain containing receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:59,319,707...59,679,071
Ensembl chr 3:59,255,848...59,679,049 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16600861) Ensembl
MGI		 PMID:16600861 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17110441) Ensembl
MGI		 PMID:17110441 GO_REF:0000107 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680 		JBrowse link
long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16342120) Ensembl
MGI		 PMID:16342120 GO_REF:0000107 NCBI chr16:8,222,909...8,318,179
Ensembl chr16:8,222,907...8,317,906 		JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta acts_upstream_of_or_within ISO PMID:2549638 MGI PMID:2549638 RGD:8553576
G CHRD chordin involved_in ISO (PMID:17634368) MGI PMID:17634368 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:23936366) MGI PMID:23936366 NCBI chr18:42,673,432...42,780,320
Ensembl chr18:42,711,471...42,780,090 		JBrowse link
G CRH corticotropin releasing hormone ISO RGD PMID:20807310 RGD:5491009 NCBI chr29:15,831,944...15,840,560
Ensembl chr29:15,831,944...15,834,384 		JBrowse link
G CRHR1 corticotropin releasing hormone receptor 1 ISO RGD PMID:19376201 RGD:5130954 NCBI chr 9:9,708,696...9,763,281
Ensembl chr 9:9,714,204...9,763,402 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:17004937 PMID:19376201 GO_REF:0000118 RGD:5130954 RGD:5131266 NCBI chr14:43,366,849...43,414,398
Ensembl chr14:43,368,340...43,415,142 		JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein acts_upstream_of_or_within ISO (PMID:17150371) MGI PMID:17150371 NCBI chr19:30,640,429...30,645,704
Ensembl chr19:30,640,429...30,646,405 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:14981263), (PMID:9427321)
(PMID:13679419)		 MGI PMID:9427321 PMID:13679419 PMID:14981263 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21425206 RGD:5131650 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:31730234) MGI PMID:31730234 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8692820) Ensembl
MGI		 PMID:8692820 GO_REF:0000107 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461 		JBrowse link
G GIP gastric inhibitory polypeptide ISO RGD PMID:18234983 RGD:2312531 NCBI chr 9:25,167,938...25,174,402
Ensembl chr 9:25,167,926...25,174,575 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:26088419 RGD:11096590 NCBI chr 4:55,801,269...56,103,383
Ensembl chr 4:55,803,296...56,103,669 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20661302)
(PMID:16901514)		 Ensembl
MGI
TreeGrafter
RGD		 PMID:16901514 PMID:20661302 PMID:26088419 GO_REF:0000107 GO_REF:0000118 RGD:11096590 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:20661302)
(PMID:16901514)		 RGD
GO_Central
MGI
TreeGrafter		 PMID:16901514 PMID:20661302 PMID:26088419 GO_REF:0000033 GO_REF:0000118 RGD:11096590 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680 		JBrowse link
G GRIN2C glutamate ionotropic receptor NMDA type subunit 2C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:5,582,404...5,595,540
Ensembl chr 9:5,576,681...5,595,146 		JBrowse link
G GRIN2D glutamate ionotropic receptor NMDA type subunit 2D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:107,821,853...107,853,411
Ensembl chr 1:107,822,716...107,849,945 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16271875) Ensembl
MGI		 PMID:16271875 GO_REF:0000107 NCBI chr 3:30,970,037...30,988,987
Ensembl chr 3:30,970,037...30,990,294 		JBrowse link
G HTR6 5-hydroxytryptamine receptor 6 ISO RGD PMID:19660530 RGD:2316998 NCBI chr 2:79,022,790...79,033,975
Ensembl chr 2:79,022,775...79,033,975 		JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:22314569 RGD:6480664 NCBI chr28:5,438,872...5,524,385
Ensembl chr28:5,440,388...5,524,191 		JBrowse link
G ITPR3 inositol 1,4,5-trisphosphate receptor type 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18417102) Ensembl
MGI		 PMID:18417102 GO_REF:0000107 NCBI chr12:2,970,613...3,050,254
Ensembl chr12:2,805,187...3,048,938 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:29915039) MGI PMID:29915039 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:23931994) MGI PMID:23931994 NCBI chr17:43,833,906...43,842,911
Ensembl chr17:43,834,562...43,836,130 		JBrowse link
G LRRTM2 leucine rich repeat transmembrane neuronal 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23931994) Ensembl
MGI		 PMID:23931994 GO_REF:0000107 NCBI chr11:26,392,642...26,397,018
Ensembl chr11:26,392,734...26,396,223 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20661302) Ensembl
MGI		 PMID:20661302 GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16087343) Ensembl
MGI		 PMID:16087343 GO_REF:0000107 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl GO_REF:0000107
G MIR101-1 microRNA mir-101-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 5:45,184,774...45,184,828
Ensembl chr 5:45,184,759...45,184,841 		JBrowse link
G MIR101-2 microRNA mir-101-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:93,194,328...93,194,382
Ensembl chr 1:93,194,309...93,194,399 		JBrowse link
G MIR106B microRNA mir-106b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 6:9,498,558...9,498,616
Ensembl chr 6:9,498,558...9,498,616 		JBrowse link
G MIR125A microRNA mir-125a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:105,400,273...105,400,332
Ensembl chr 1:105,400,270...105,400,337 		JBrowse link
G MIR125B-1 microRNA mir-125b-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 5:12,097,672...12,097,732
Ensembl chr 5:12,097,658...12,097,745 		JBrowse link
G MIR125B-2 microRNA mir-125b-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr31:13,304,980...13,305,040
Ensembl chr31:13,304,964...13,305,052 		JBrowse link
G MIR126 microRNA mir-126 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 9:48,879,438...48,879,496
Ensembl chr 9:48,879,432...48,879,504 		JBrowse link
G MIR127 microRNA mir-127 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,104,938...69,104,997
Ensembl chr 8:69,104,906...69,105,016 		JBrowse link
G MIR128-1 microRNA mir-128-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr19:38,435,956...38,436,011 JBrowse link
G MIR128-2 microRNA mir-128-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr23:5,826,463...5,826,520
Ensembl chr23:5,826,449...5,826,532 		JBrowse link
G MIR129-1 microRNA mir-129-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr14:8,165,110...8,165,174
Ensembl chr14:8,165,107...8,165,179 		JBrowse link
G MIR130A microRNA mir-130a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr18:38,543,618...38,543,679
Ensembl chr18:38,543,618...38,543,681 		JBrowse link
G MIR132 microRNA mir-132 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 9:46,153,531...46,153,590
Ensembl chr 9:46,153,511...46,153,611 		JBrowse link
G MIR134 microRNA mir-134 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,283,496...69,283,568 JBrowse link
G MIR137 microRNA mir-137 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 6:51,640,476...51,640,530
Ensembl chr 6:51,640,452...51,640,556 		JBrowse link
G MIR138A microRNA mir-138a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr23:2,223,136...2,223,197
Ensembl chr23:2,223,128...2,223,205 		JBrowse link
G MIR138B microRNA mir-138b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 2:59,454,083...59,454,151
Ensembl chr 2:59,454,083...59,454,151 		JBrowse link
G MIR145 microRNA mir-145 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210 		JBrowse link
G MIR148B microRNA mir-148b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr27:975,146...975,206
Ensembl chr27:975,131...975,220 		JBrowse link
G MIR150 microRNA mir-150 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:106,998,756...106,998,812
Ensembl chr 1:106,998,756...106,998,812 		JBrowse link
G MIR151 microRNA mir-151 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr13:35,353,689...35,353,744
Ensembl chr13:35,353,689...35,353,744 		JBrowse link
G MIR153 microRNA mir-153 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr16:19,932,378...19,932,457
Ensembl chr16:19,932,378...19,932,457 		JBrowse link
G MIR15A microRNA mir-15a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr22:1,846,880...1,846,938
Ensembl chr22:1,846,866...1,846,960 		JBrowse link
G MIR17 microRNA mir-17 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr22:42,478,013...42,478,071
Ensembl chr22:42,478,000...42,478,083 		JBrowse link
G MIR181A-1 microRNA mir-181a-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 7:4,055,465...4,055,526
Ensembl chr 7:4,055,465...4,055,526 		JBrowse link
G MIR181A-2 microRNA mir-181a-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 9:58,302,547...58,302,606
Ensembl chr 9:58,302,547...58,302,606 		JBrowse link
G MIR181B-2 microRNA mir-181b-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 9:58,301,314...58,301,373
Ensembl chr 9:58,301,300...58,301,388 		JBrowse link
G MIR181C microRNA mir-181c acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:48,593,343...48,593,403
Ensembl chr20:48,593,325...48,593,421 		JBrowse link
G MIR181D microRNA mir-181d acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:48,593,158...48,593,221 JBrowse link
G MIR187 microRNA mir-187 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 7:54,261,943...54,262,010
Ensembl chr 7:54,261,943...54,262,010 		JBrowse link
G MIR191 microRNA mir-191 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:40,144,135...40,144,198
Ensembl chr20:40,144,121...40,144,210 		JBrowse link
G MIR195 microRNA mir-195 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 5:32,045,450...32,045,510
Ensembl chr 5:32,045,450...32,045,510 		JBrowse link
G MIR19A microRNA mir-19a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr22:42,478,298...42,478,355
Ensembl chr22:42,478,285...42,478,366 		JBrowse link
G MIR19B-1 microRNA mir-19b-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr22:42,478,598...42,478,656 JBrowse link
G MIR19B-2 microRNA mir-19b-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:104,895,962...104,896,025
Ensembl chr  X:104,895,962...104,896,025 		JBrowse link
G MIR204 microRNA mir-204 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:86,818,494...86,818,553
Ensembl chr 1:86,818,489...86,818,556 		JBrowse link
G MIR20A microRNA mir-20a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr22:42,478,462...42,478,520
Ensembl chr22:42,478,462...42,478,520 		JBrowse link
G MIR211 microRNA mir-211 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 3:37,882,660...37,882,759
Ensembl chr 3:37,882,660...37,882,759 		JBrowse link
G MIR218-1 microRNA mir-218-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 3:89,044,709...89,044,772
Ensembl chr 3:89,044,699...89,044,782 		JBrowse link
G MIR218-2 microRNA mir-218-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 4:43,010,775...43,010,838
Ensembl chr 4:43,010,751...43,010,860 		JBrowse link
G MIR22 microRNA mir-22 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 9:45,852,534...45,852,593
Ensembl chr 9:45,852,517...45,852,609 		JBrowse link
G MIR221 microRNA mir-221 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:39,523,890...39,523,951
Ensembl chr  X:39,523,885...39,523,954 		JBrowse link
G MIR222 microRNA mir-222 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:39,524,519...39,524,608
Ensembl chr  X:39,524,519...39,524,608 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:48,620,335...48,620,386
Ensembl chr20:48,620,323...48,620,397 		JBrowse link
G MIR23B microRNA mir-23b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:71,678,353...71,678,406
Ensembl chr 1:71,678,346...71,678,416 		JBrowse link
G MIR24-1 microRNA mir-24-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:71,677,608...71,677,669
Ensembl chr 1:71,677,608...71,677,669 		JBrowse link
G MIR24-2 microRNA mir-24-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:48,620,684...48,620,745
Ensembl chr20:48,620,674...48,620,745 		JBrowse link
G MIR25 microRNA mir-25 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 6:9,498,993...9,499,051
Ensembl chr 6:9,498,993...9,499,051 		JBrowse link
G MIR26A-1 microRNA mir-26a-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr23:7,747,073...7,747,133
Ensembl chr23:7,747,064...7,747,140 		JBrowse link
G MIR26A-2 microRNA mir-26a-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr10:1,880,513...1,880,572
Ensembl chr10:1,880,513...1,880,572 		JBrowse link
G MIR26B microRNA mir-26b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr37:25,054,488...25,054,543 JBrowse link
G MIR28 microRNA mir-28 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr34:20,971,517...20,971,578
Ensembl chr34:20,971,504...20,971,589 		JBrowse link
G MIR29A microRNA mir-29a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr14:6,184,844...6,184,903
Ensembl chr14:6,184,830...6,184,916 		JBrowse link
G MIR29B-1 microRNA mir-29b-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr14:6,184,457...6,184,521
Ensembl chr14:6,184,446...6,184,531 		JBrowse link
G MIR29B-2 microRNA mir-29b-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 7:6,651,878...6,651,943
Ensembl chr 7:6,651,866...6,651,955 		JBrowse link
G MIR301B microRNA mir-301b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr26:30,924,103...30,924,178
Ensembl chr26:30,924,103...30,924,178 		JBrowse link
G MIR30A microRNA mir-30a acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr12:33,783,894...33,783,956
Ensembl chr12:33,783,891...33,783,961 		JBrowse link
G MIR30B microRNA mir-30b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr13:30,906,038...30,906,097
Ensembl chr13:30,906,038...30,906,097 		JBrowse link
G MIR30C-1 microRNA mir-30c-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr15:2,280,050...2,280,110
Ensembl chr15:2,280,039...2,280,121 		JBrowse link
G MIR30C-2 microRNA mir-30c-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr12:33,757,899...33,757,960
Ensembl chr12:33,757,890...33,757,969 		JBrowse link
G MIR30D microRNA mir-30d acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr13:30,910,306...30,910,365
Ensembl chr13:30,910,306...30,910,365 		JBrowse link
G MIR30E microRNA mir-30e acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr15:2,283,306...2,283,369
Ensembl chr15:2,283,306...2,283,369 		JBrowse link
G MIR320 microRNA mir-320 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr25:35,016,676...35,016,729
Ensembl chr25:35,016,666...35,016,743 		JBrowse link
G MIR324 microRNA mir-324 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 5:32,192,273...32,192,340
Ensembl chr 5:32,192,273...32,192,340 		JBrowse link
G MIR330 microRNA mir-330 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:109,922,138...109,922,226
Ensembl chr 1:109,922,124...109,922,231 		JBrowse link
G MIR342 microRNA mir-342 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25858512) RNAcentral
MGI		 PMID:25858512 GO_REF:0000115 NCBI chr 8:68,424,656...68,424,718 JBrowse link
G MIR345 microRNA mir-345 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:68,592,447...68,592,506 JBrowse link
G MIR369 microRNA mir-369 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,294,073...69,294,128 JBrowse link
G MIR378 microRNA mir-378 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 4:59,276,347...59,276,406
Ensembl chr 4:59,276,336...59,276,417 		JBrowse link
G MIR381 microRNA mir-381 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,274,983...69,275,057 JBrowse link
G MIR383 microRNA mir-383 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr16:38,173,722...38,173,783
Ensembl chr16:38,173,693...38,173,803 		JBrowse link
G MIR410 microRNA mir-410 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,294,377...69,294,432 JBrowse link
G MIR421 microRNA mir-421 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:57,550,055...57,550,110
Ensembl chr  X:57,550,039...57,550,123 		JBrowse link
G MIR425 microRNA mir-425 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:40,144,613...40,144,675
Ensembl chr20:40,144,606...40,144,683 		JBrowse link
G MIR433 microRNA mir-433 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25858512) RNAcentral
MGI		 PMID:25858512 GO_REF:0000115 NCBI chr 8:69,103,838...69,103,911
Ensembl chr 8:69,103,820...69,103,928 		JBrowse link
G MIR486 microRNA mir-486 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr16:23,958,963...23,959,026
Ensembl chr16:23,958,963...23,959,026 		JBrowse link
G MIR487B microRNA mir-487b acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,275,496...69,275,553
Ensembl chr 8:69,275,473...69,275,576 		JBrowse link
G MIR502 microRNA mir-502 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:42,785,601...42,785,659
Ensembl chr  X:42,785,587...42,785,666 		JBrowse link
G MIR539 microRNA mir-539 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 8:69,276,311...69,276,386 JBrowse link
G MIR545 microRNA mir-545 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr  X:57,590,201...57,590,306
Ensembl chr  X:57,590,201...57,590,306 		JBrowse link
G MIR652 microRNA mir-652 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:83,271,857...83,271,919
Ensembl chr  X:83,271,857...83,271,919 		JBrowse link
G MIR7-1 microRNA mir-7-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:75,509,765...75,509,828
Ensembl chr 1:75,509,743...75,509,851 		JBrowse link
G MIR7-3 microRNA mir-7-3 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr20:54,993,200...54,993,287
Ensembl chr20:54,993,200...54,993,287 		JBrowse link
G MIR9-2 microRNA mir-9-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 3:19,997,697...19,997,756
Ensembl chr 3:19,997,682...19,997,768 		JBrowse link
G MIR9-3 microRNA mir-9-3 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 3:52,410,840...52,410,900
Ensembl chr 3:52,410,825...52,410,914 		JBrowse link
G MIR92A-1 microRNA mir-92a-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr22:42,478,714...42,478,772 JBrowse link
G MIR92A-2 microRNA mir-92a-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:104,895,826...104,895,886
Ensembl chr  X:104,895,826...104,895,886 		JBrowse link
G MIR93 microRNA mir-93 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 6:9,498,780...9,498,840 JBrowse link
G MIR95 microRNA mir-95 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 3:59,867,521...59,867,601
Ensembl chr 3:59,867,521...59,867,601 		JBrowse link
G MIR98 microRNA mir-98 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr  X:45,253,693...45,253,772
Ensembl chr  X:45,253,696...45,253,775 		JBrowse link
G MIR99A-1 microRNA mir-99a-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr31:13,258,782...13,258,840
Ensembl chr31:13,258,782...13,258,840 		JBrowse link
G MIR99A-2 microRNA mir-99a-2 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 5:12,047,369...12,047,425
Ensembl chr 5:12,047,369...12,047,425 		JBrowse link
G MIRLET7A-1 microRNA let-7a-1 acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr10:20,034,319...20,034,387
Ensembl chr10:20,034,319...20,034,387 		JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr31:13,259,522...13,259,588
Ensembl chr31:13,259,502...13,259,609 		JBrowse link
G MIRLET7D microRNA let-7d acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:97,902,012...97,902,136
Ensembl chr 1:97,902,012...97,902,136 		JBrowse link
G MIRLET7E microRNA let-7e acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:105,400,740...105,400,806
Ensembl chr 1:105,400,730...105,400,816 		JBrowse link
G MIRLET7F microRNA let-7f acts_upstream_of_or_within ISO (PMID:25858512) MGI PMID:25858512 NCBI chr 1:97,903,931...97,904,008
Ensembl chr 1:97,903,919...97,904,028 		JBrowse link
G MPP2 MAGUK p55 scaffold protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,411,796...19,440,947
Ensembl chr 9:19,413,619...19,438,909 		JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO RGD PMID:16870737 RGD:2317092 NCBI chr11:65,552,320...65,642,165
Ensembl chr11:65,551,889...65,642,349 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:16271875) MGI PMID:16271875 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100 		JBrowse link
G NLGN1 neuroligin 1 ISO RGD PMID:23083734 RGD:9831154 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177 		JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) CACAO PMID:21808020 MGI:5286761 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NPTN neuroplastin involved_in ISO PMID:16925595 UniProt PMID:16925595 RGD:8554143 NCBI chr30:36,846,475...36,880,096
Ensembl chr30:36,847,022...36,880,097 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16289828) Ensembl
MGI		 PMID:16289828 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032 		JBrowse link
G PLK2 polo like kinase 2 involved_in ISO PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 2:45,359,865...45,365,496
Ensembl chr 2:45,360,374...45,367,441 		JBrowse link
G PRKCG protein kinase C gamma ISO RGD PMID:10501452 RGD:28867228 NCBI chr 1:103,295,110...103,312,562 JBrowse link
G PRKCZ protein kinase C zeta involved_in ISO PMID:11914719 UniProt PMID:11914719 RGD:8554098 NCBI chr 5:57,012,020...57,113,346
Ensembl chr 5:57,012,070...57,112,664 		JBrowse link
G PRRT1 proline rich transmembrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29490264) Ensembl
MGI		 PMID:29490264 GO_REF:0000107 NCBI chr12:1,545,384...1,549,015
Ensembl chr12:1,542,789...1,548,964 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in ISO PMID:11239437 Alzheimers_University_of_Toronto PMID:11239437 RGD:8553497 NCBI chr25:30,137,546...30,264,221
Ensembl chr25:30,138,209...30,264,133 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8904779 RGD:9831451 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G RASGRF2 Ras protein specific guanine nucleotide releasing factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20661302) Ensembl
MGI		 PMID:20661302 GO_REF:0000107 NCBI chr 3:26,047,304...26,286,919
Ensembl chr 3:26,050,260...26,286,819 		JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G RGS14 regulator of G protein signaling 14 involved_in ISO (MGI:4834960|PMID:20837545) UniProt PMID:20837545 MGI:4834960 NCBI chr 4:35,984,970...35,999,386
Ensembl chr 4:35,985,132...35,999,294 		JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 ISO RGD PMID:21849565 RGD:5686386 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410 		JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:21546003 RGD:5508826 NCBI chr31:39,783,990...39,788,289
Ensembl chr31:39,784,506...39,788,183 		JBrowse link
G SERPINE2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:9169529) MGI PMID:9169529 NCBI chr37:29,699,551...29,750,151
Ensembl chr37:29,700,024...29,724,228 		JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO (MGI:5432970|PMID:22699620) BHF-UCL PMID:22699620 MGI:5432970 NCBI chr18:47,477,625...47,915,557
Ensembl chr18:47,635,788...47,912,117 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19923291) Ensembl
MGI		 PMID:19923291 GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260 		JBrowse link
G SLC24A2 solute carrier family 24 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407245) Ensembl
MGI		 PMID:16407245 GO_REF:0000107 NCBI chr11:39,273,285...39,521,223
Ensembl chr11:39,278,370...39,519,222 		JBrowse link
G SLC8A2 solute carrier family 8 member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6282180|PMID:29274751) ARUK-UCL
Ensembl		 PMID:29274751 GO_REF:0000107 MGI:6282180 NCBI chr 1:108,544,825...108,575,894
Ensembl chr 1:108,544,509...108,575,891 		JBrowse link
G SLC8A3 solute carrier family 8 member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6282180|PMID:29274751) ARUK-UCL
Ensembl		 PMID:29274751 GO_REF:0000107 MGI:6282180 NCBI chr 8:43,780,363...43,926,142
Ensembl chr 8:43,781,120...43,926,343 		JBrowse link
G SNAP25 synaptosome associated protein 25 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23395379) Ensembl
MGI		 PMID:23395379 GO_REF:0000107 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329 		JBrowse link
G SNAP47 synaptosome associated protein 47 acts_upstream_of_or_within ISO (PMID:23395379) MGI PMID:23395379 NCBI chr14:1,058,891...1,104,568
Ensembl chr14:1,056,802...1,104,574 		JBrowse link
G SNCA synuclein alpha acts_upstream_of_or_within ISO (PMID:17689254) MGI PMID:17689254 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383 		JBrowse link
G STX3 syntaxin 3 acts_upstream_of_or_within ISO (PMID:23395379) MGI PMID:23395379 NCBI chr21:50,298,040...50,322,773
Ensembl chr21:50,298,158...50,318,663 		JBrowse link
G STX4 syntaxin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370 		JBrowse link
G SYT12 synaptotagmin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,334,779...50,358,113
Ensembl chr18:50,336,042...50,351,333 		JBrowse link
G TNR tenascin R involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11161481), (PMID:17537973) Ensembl
MGI		 PMID:11161481 PMID:17537973 GO_REF:0000107 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:5819322|PMID:27668656) UniProt PMID:27668656 MGI:5819322 NCBI chr 1:120,388,125...120,471,185
Ensembl chr 1:120,388,107...120,456,185 		JBrowse link
G UNC13A unc-13 homolog A ISO RGD PMID:21849565 RGD:5686386 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115 		JBrowse link
G VAMP2 vesicle associated membrane protein 2 acts_upstream_of_or_within ISO (PMID:23395379) MGI PMID:23395379 NCBI chr 5:32,975,372...32,977,967 JBrowse link
negative regulation of long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24259587) Ensembl
MGI		 PMID:24259587 GO_REF:0000107 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (MGI:2136541|PMID:11438589) UniProt PMID:11438589 MGI:2136541 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
negative regulation of long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307 		JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:14596853 RGD:1625717 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G APOE apolipoprotein E involved_in ISO (PMID:16273551) ARUK-UCL PMID:16273551 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440 		JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G C26H22orf39 chromosome 26 C22orf39 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,765,870...29,770,079
Ensembl chr26:29,765,936...29,769,471 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:23855980 RGD:9491766 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646 		JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISO (MGI:6162291|PMID:21969592) UniProt PMID:21969592 MGI:6162291 NCBI chr20:32,047,132...32,099,815
Ensembl chr20:32,047,625...32,097,585 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:14,129,978...14,192,016
Ensembl chr34:14,130,017...14,191,370 		JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:16899074 RGD:10002752 NCBI chr14:20,251,791...20,563,315
Ensembl chr14:20,251,738...20,557,208 		JBrowse link
G PRNP prion protein involved_in ISO PMID:21593310 ARUK-UCL PMID:21593310 RGD:12790639 NCBI chr24:16,845,224...16,862,319
Ensembl chr24:16,846,207...16,859,815 		JBrowse link
G PTN pleiotrophin involved_in ISO (MGI:2136679|PMID:11414790), (MGI:2181835|PMID:12093164) UniProt PMID:11414790 PMID:12093164 MGI:2136679 MGI:2181835 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G TYROBP transmembrane immune signaling adaptor TYROBP involved_in ISO (MGI:3531596|PMID:15601948) ARUK-UCL PMID:15601948 MGI:3531596 NCBI chr 1:116,757,271...116,760,453
Ensembl chr 1:116,757,289...116,772,325 		JBrowse link
negative regulation of short-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT4 synaptotagmin 4 involved_in ISO (MGI:5796263|PMID:15390175) ParkinsonsUK-UCL PMID:15390175 MGI:5796263 NCBI chr 7:47,555,110...47,565,313
Ensembl chr 7:47,509,852...47,563,714 		JBrowse link
negative regulation of short-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRRT2 proline rich transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,872,670...17,877,502
Ensembl chr 6:17,873,521...17,903,184 		JBrowse link
negative regulation of synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17529984) Ensembl
MGI		 PMID:17529984 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:22918985 RGD:7174737 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755 		JBrowse link
G RGS14 regulator of G protein signaling 14 involved_in ISO (MGI:4834960|PMID:20837545) UniProt PMID:20837545 MGI:4834960 NCBI chr 4:35,984,970...35,999,386
Ensembl chr 4:35,985,132...35,999,294 		JBrowse link
G RIN1 Ras and Rab interactor 1 acts_upstream_of_or_within ISO (PMID:12574403) MGI PMID:12574403 NCBI chr18:50,975,002...50,982,052
Ensembl chr18:50,975,814...50,980,381 		JBrowse link
G UNC13B unc-13 homolog B involved_in ISO (MGI:5490921|PMID:23658173) ParkinsonsUK-UCL PMID:23658173 MGI:5490921 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955 		JBrowse link
G UNC13C unc-13 homolog C involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:19,519,177...20,096,633
Ensembl chr30:19,518,232...20,095,094 		JBrowse link
positive regulation of long-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:14699417 RGD:4891114 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11754836) Ensembl
MGI		 PMID:11754836 GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:28894415 RGD:38501107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G GRM5 glutamate metabotropic receptor 5 ISO RGD PMID:12740378 RGD:731147 NCBI chr21:10,980,186...11,496,539
Ensembl chr21:10,996,075...11,493,290 		JBrowse link
G KDR kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:11112797 RGD:2292520 NCBI chr13:47,108,442...47,190,935
Ensembl chr13:47,108,504...47,190,029 		JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,856,494...15,935,897
Ensembl chr28:15,856,616...15,933,763 		JBrowse link
G NPTN neuroplastin involved_in ISO PMID:10759566 HGNC-UCL PMID:10759566 RGD:8553916 NCBI chr30:36,846,475...36,880,096
Ensembl chr30:36,847,022...36,880,097 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
positive regulation of long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY8 adenylate cyclase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:27,723,530...27,937,821
Ensembl chr13:27,723,530...27,937,734 		JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:28894415 RGD:38501107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656 		JBrowse link
G IQSEC2 IQ motif and Sec7 domain ArfGEF 2 ISO RGD PMID:27009485 RGD:11049506 NCBI chr  X:44,861,813...44,915,011
Ensembl chr  X:44,872,888...44,913,704 		JBrowse link
G KCNB1 potassium voltage-gated channel subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,016,800...36,118,873
Ensembl chr24:36,025,472...36,117,934 		JBrowse link
G LOC611446 leukocyte immunoglobulin-like receptor subfamily A member 6 involved_in ISO (MGI:5511064|PMID:24052308) ARUK-UCL PMID:24052308 MGI:5511064 NCBI chr 1:102,955,916...102,978,669 JBrowse link
G MAPT microtubule associated protein tau ISO RGD PMID:24298146 RGD:10412705 NCBI chr 9:9,572,174...9,674,082
Ensembl chr 9:9,570,557...9,674,349 		JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:16899074 RGD:10002752 NCBI chr14:20,251,791...20,563,315
Ensembl chr14:20,251,738...20,557,208 		JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:21508097 RGD:10043164 NCBI chr29:21,995,229...22,292,107
Ensembl chr29:21,996,108...22,283,355 		JBrowse link
positive regulation of long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in ISO (MGI:1344240|PMID:10482244) UniProt PMID:10482244 MGI:1344240 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094 		JBrowse link
G ADCY8 adenylate cyclase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:27,723,530...27,937,821
Ensembl chr13:27,723,530...27,937,734 		JBrowse link
G ADORA2A adenosine A2a receptor ISO RGD PMID:14596853 RGD:1625717 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598 		JBrowse link
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:21848869 RGD:8693685 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684 		JBrowse link
G AKAP5 A-kinase anchoring protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,891,637...38,902,390
Ensembl chr 8:38,896,840...38,898,126 		JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:36,852,082...37,164,930
Ensembl chr 3:36,852,543...36,978,399 		JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5648736|PMID:26074003) UniProt PMID:26074003 MGI:5648736 NCBI chr28:6,523,894...6,724,010
Ensembl chr28:6,529,212...6,723,454 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:16000619 RGD:10059422 NCBI chr37:15,921,214...15,978,492
Ensembl chr37:15,939,138...15,977,556 		JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 ISO RGD PMID:17183642 RGD:9685167 NCBI chr20:44,315,021...44,394,385
Ensembl chr20:44,319,858...44,394,599 		JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:20377617 RGD:6907453 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:20377617 RGD:6907453 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:3589053|PMID:16121183) UniProt PMID:16121183 MGI:3589053 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:28894415 RGD:38501107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:24990929 RGD:10002784 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G IGSF11 immunoglobulin superfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:22,641,370...22,825,973
Ensembl chr33:22,641,648...22,840,745 		JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:1,810,263...1,843,116
Ensembl chr 8:1,728,273...1,843,050 		JBrowse link
G MME membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:48,966,222...49,059,919
Ensembl chr23:48,971,066...49,059,919 		JBrowse link
G NOS1 nitric oxide synthase 1 ISO RGD PMID:23579428 RGD:7257653 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332 		JBrowse link
G NPTN neuroplastin ISO RGD PMID:10759566 RGD:8553916 NCBI chr30:36,846,475...36,880,096
Ensembl chr30:36,847,022...36,880,097 		JBrowse link
G NRGN neurogranin ISO RGD PMID:7620629 RGD:9835395 NCBI chr 5:9,673,107...9,679,819
Ensembl chr 5:9,673,809...9,679,799 		JBrowse link
G PDE9A phosphodiesterase 9A ISO RGD PMID:31578258 RGD:243048433 NCBI chr31:36,949,777...37,036,237
Ensembl chr31:36,949,723...37,035,809 		JBrowse link
G PRKAR1B protein kinase cAMP-dependent type I regulatory subunit beta ISO RGD PMID:33479380 RGD:150519900 NCBI chr 6:16,135,406...16,248,567
Ensembl chr 6:16,135,715...16,247,465 		JBrowse link
G PTPN5 protein tyrosine phosphatase non-receptor type 5 ISO RGD PMID:19026408 RGD:9835020 NCBI chr21:41,097,563...41,154,247
Ensembl chr21:41,097,569...41,136,706 		JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SHISA7 shisa family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,260,917...102,270,388
Ensembl chr 1:102,261,484...102,268,179 		JBrowse link
G SLC18A3 solute carrier family 18 member A3 involved_in ISO (MGI:5448761|PMID:23045697) UniProt PMID:23045697 MGI:5448761 NCBI chr28:1,476,873...1,478,538
Ensembl chr28:1,476,774...1,478,505 		JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,859,776...1,869,289
Ensembl chr11:1,859,465...1,870,755 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 ISO RGD PMID:21508097 RGD:10043164 NCBI chr24:35,816,224...35,868,791
Ensembl chr24:35,817,664...35,860,021 		JBrowse link
G ZDHHC2 zinc finger DHHC-type palmitoyltransferase 2 involved_in ISO PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:40,496,469...40,551,979
Ensembl chr16:40,506,524...40,543,360 		JBrowse link
positive regulation of synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY8 adenylate cyclase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:27,723,530...27,937,821
Ensembl chr13:27,723,530...27,937,734 		JBrowse link
G ANAPC2 anaphase promoting complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,475,777...48,486,715
Ensembl chr 9:48,471,584...48,609,303 		JBrowse link
G ANAPC2 anaphase promoting complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,488,897...48,490,044
Ensembl chr 9:48,471,584...48,609,303 		JBrowse link
G CDC20 cell division cycle 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,803,204...16,806,935
Ensembl chr15:16,803,204...16,806,919 		JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:25723479 RGD:11570400 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212 		JBrowse link
G CPLX2 complexin 2 involved_in ISO (MGI:5009363|PMID:19900895) UniProt PMID:19900895 MGI:5009363 NCBI chr 4:37,203,003...37,275,938
Ensembl chr 4:37,206,082...37,275,954 		JBrowse link
G DBN1 drebrin 1 involved_in ISO (MGI:5688247|PMID:25865831) UniProt PMID:25865831 MGI:5688247 NCBI chr 4:35,899,969...35,913,015
Ensembl chr 4:35,889,392...35,912,507 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G HRH2 histamine receptor H2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,333,843...37,407,146
Ensembl chr 4:37,275,852...37,386,072 		JBrowse link
G HRH2 complexin 2 involved_in IEA Ensembl GO_REF:0000107
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:23015442 RGD:12790708 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:17493927 RGD:1642034 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293 		JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,864,708...22,869,044
Ensembl chr 9:22,866,212...22,867,360 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18540883 RGD:2300227 NCBI chr 7:19,668,079...19,674,903
Ensembl chr 7:19,668,082...19,674,903 		JBrowse link
G SSH1 slingshot protein phosphatase 1 ISO RGD PMID:20442266 RGD:11535133 NCBI chr26:18,074,229...18,136,001
Ensembl chr26:18,074,075...18,131,185 		JBrowse link
G UNC13A unc-13 homolog A involved_in ISO (MGI:5490921|PMID:23658173) ParkinsonsUK-UCL PMID:23658173 MGI:5490921 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115 		JBrowse link
regulation of long-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11282364 RGD:1582105 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880 		JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G BDNF brain derived neurotrophic factor ISO RGD PMID:12201640 RGD:724690 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480 		JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta acts_upstream_of_or_within ISO (PMID:19503086) MGI PMID:19503086
G DLG4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12427827) Ensembl
MGI		 PMID:12427827 GO_REF:0000107 NCBI chr 5:32,165,399...32,175,600
Ensembl chr 5:32,163,594...32,188,126 		JBrowse link
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9169514) Ensembl
MGI		 PMID:9169514 GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:16930406 RGD:1626499 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575 		JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb involved_in ISO (MGI:5514474|PMID:23921129) ARUK-UCL PMID:23921129 MGI:5514474 NCBI chr38:20,980,777...20,994,403 JBrowse link
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11182092), (PMID:12947409), (PMID:15673679), (PMID:16219388) Ensembl
MGI		 PMID:11182092 PMID:12947409 PMID:15673679 PMID:16219388 GO_REF:0000107 NCBI chr12:58,932,754...59,991,305
Ensembl chr12:59,355,017...59,990,408 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:17313573)
(PMID:10818139)
(PMID:17015831)		 MGI PMID:10818139 PMID:17015831 PMID:17313573 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:16904707 PMID:17655746 RGD:1642204 RGD:1642207 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:16904707 PMID:17655746 RGD:1642204 RGD:1642207 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680 		JBrowse link
G GRM5 glutamate metabotropic receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16024054) Ensembl
MGI		 PMID:16024054 GO_REF:0000107 NCBI chr21:10,980,186...11,496,539
Ensembl chr21:10,996,075...11,493,290 		JBrowse link
G HRAS HRas proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12427827) Ensembl
MGI		 PMID:12427827 GO_REF:0000107 NCBI chr18:25,642,844...25,644,717
Ensembl chr18:25,642,844...25,644,717 		JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chr38:22,114,718...22,143,625
Ensembl chr38:22,130,508...22,140,813 		JBrowse link
G KRAS KRAS proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11793011) Ensembl
MGI		 PMID:11793011 GO_REF:0000107 NCBI chr27:22,261,753...22,296,704
Ensembl chr27:22,257,941...22,293,369 		JBrowse link
G LNPEP leucyl and cystinyl aminopeptidase ISO RGD PMID:11282364 RGD:1582105 NCBI chr 3:12,668,994...12,766,712
Ensembl chr 3:12,681,577...12,767,183 		JBrowse link
G NETO1 neuropilin and tolloid like 1 involved_in ISO (MGI:3836361|PMID:19243221) UniProt PMID:19243221 MGI:3836361 NCBI chr 1:6,114,152...6,242,178
Ensembl chr 1:6,114,067...6,225,821 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:11793011) MGI PMID:11793011 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family ISO RGD PMID:18045925 RGD:2306457 NCBI chr30:30,200,831...30,218,412
Ensembl chr30:30,200,831...30,218,411 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family involved_in ISO
IBA		 RGD
GO_Central		 PMID:18653660 GO_REF:0000033 RGD:2306450 NCBI chr23:23,303,650...23,333,571
Ensembl chr23:23,304,940...23,332,206 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family ISO RGD PMID:15297461 PMID:18045925 RGD:2306456 RGD:2306457 NCBI chr20:46,334,601...46,351,907
Ensembl chr20:46,334,601...46,351,907 		JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 acts_upstream_of_or_within ISO (PMID:11797010) MGI PMID:11797010 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410 		JBrowse link
G SNCA synuclein alpha acts_upstream_of_or_within ISO (PMID:15510220) MGI PMID:15510220 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383 		JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15781580)
(PMID:12427827)		 Ensembl
MGI		 PMID:12427827 PMID:15781580 GO_REF:0000107 NCBI chr12:2,829,274...2,862,888
Ensembl chr12:2,829,306...2,851,432 		JBrowse link
G SYNGR1 synaptogyrin 1 involved_in ISO (MGI:1349221|PMID:10595519) UniProt PMID:10595519 MGI:1349221 NCBI chr10:25,685,079...25,735,940
Ensembl chr10:25,687,633...25,713,300 		JBrowse link
G SYNPO synaptopodin involved_in ISO (MGI:2673780|PMID:12928494) SynGO-UCL PMID:12928494 MGI:2673780 NCBI chr 4:58,501,361...58,549,340
Ensembl chr 4:58,497,734...58,550,438 		JBrowse link
G SYP synaptophysin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,288,071...42,301,802
Ensembl chr  X:42,288,148...42,299,487 		JBrowse link
regulation of long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARC activity regulated cytoskeleton associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:36,743,027...36,744,266 JBrowse link
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355 		JBrowse link
G DGKI diacylglycerol kinase iota involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21119615) Ensembl
MGI		 PMID:21119615 GO_REF:0000107 NCBI chr16:10,975,394...11,250,430
Ensembl chr16:10,682,935...11,248,029 		JBrowse link
G GNAL G protein subunit alpha L ISO RGD PMID:31678405 RGD:150429833 NCBI chr 7:77,378,134...77,521,215
Ensembl chr 7:77,413,986...77,521,042 		JBrowse link
G PENK proenkephalin involved_in ISO (MGI:7260092|PMID:35201898) UniProt PMID:35201898 MGI:7260092 NCBI chr29:7,757,543...7,763,137
Ensembl chr29:7,757,857...7,762,398 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SORCS3 sortilin related VPS10 domain containing receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24069373) Ensembl
MGI		 PMID:24069373 GO_REF:0000107 NCBI chr28:16,909,908...17,491,097
Ensembl chr28:16,909,856...17,489,418 		JBrowse link
regulation of long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:36,743,027...36,744,266 JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925 		JBrowse link
G CALB2 calbindin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:77,178,158...77,205,663
Ensembl chr 5:77,177,951...77,205,671 		JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,064,898...68,095,537
Ensembl chr 8:68,041,344...68,095,212 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G LOC611446 leukocyte immunoglobulin-like receptor subfamily A member 6 involved_in ISO (MGI:5511064|PMID:24052308) ARUK-UCL PMID:24052308 MGI:5511064 NCBI chr 1:102,955,916...102,978,669 JBrowse link
G NCSTN nicastrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24889619) Ensembl
MGI		 PMID:24889619 GO_REF:0000107 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) BHF-UCL PMID:21808020 MGI:5286761 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371 		JBrowse link
G NSG1 neuronal vesicle trafficking associated 1 involved_in ISO PMID:15911354 UniProt PMID:15911354 RGD:9850096 NCBI chr 3:69,805,646...69,831,200
Ensembl chr 3:69,805,592...69,831,194 		JBrowse link
G PAIP2 poly(A) binding protein interacting protein 2 acts_upstream_of_or_within ISO (PMID:23622065) MGI PMID:23622065 NCBI chr 2:34,671,130...34,695,974
Ensembl chr 2:34,671,150...34,695,299 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416 		JBrowse link
G SCGN secretagogin, EF-hand calcium binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:23,602,244...23,638,108
Ensembl chr35:23,602,343...23,638,055 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (MGI:6241448|PMID:30401835) UniProt PMID:30401835 MGI:6241448 NCBI chr24:46,927,218...46,940,015
Ensembl chr24:46,927,848...46,951,949 		JBrowse link
regulation of neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP4 acid phosphatase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:106,051,901...106,056,137
Ensembl chr 1:106,051,901...106,056,137 		JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7857651 GO_REF:0000118 RGD:61538 NCBI chr13:36,743,027...36,744,266 JBrowse link
G BCAN brevican ISO RGD PMID:15935069 RGD:1578390 NCBI chr 7:41,313,578...41,330,178
Ensembl chr 7:41,313,579...41,330,178 		JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO RGD PMID:9532582 RGD:68312 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525 		JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 ISO RGD PMID:9532582 RGD:68312 NCBI chr27:21,464,302...21,469,119 JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha acts_upstream_of_or_within ISO (PMID:17610578) MGI PMID:17610578 NCBI chr 4:58,800,818...58,865,830
Ensembl chr 4:58,800,813...58,865,830 		JBrowse link
G CHRD chordin involved_in ISO (PMID:17634368) MGI PMID:17634368 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 acts_upstream_of_or_within ISO (PMID:15169862) MGI PMID:15169862 NCBI chr 3:54,405,140...54,499,614
Ensembl chr 3:54,405,717...54,500,221 		JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr 5:32,165,399...32,175,600
Ensembl chr 5:32,163,594...32,188,126 		JBrowse link
G EGR2 early growth response 2 ISO RGD PMID:8619872 RGD:728620 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11754835) Ensembl
MGI		 PMID:11754835 GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:15576450) MGI PMID:15576450 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:17329210 RGD:1641844 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G JPH3 junctophilin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17347645) Ensembl
MGI		 PMID:17347645 GO_REF:0000107 NCBI chr 5:65,445,329...65,530,288
Ensembl chr 5:65,451,050...65,530,294 		JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 ISO RGD PMID:21521760 RGD:7205439 NCBI chr11:4,279,362...4,423,080
Ensembl chr11:4,154,746...4,423,078 		JBrowse link
G MYLK2 myosin light chain kinase 2 ISO RGD PMID:16515842 RGD:1600505 NCBI chr24:21,284,309...21,297,889
Ensembl chr24:21,284,352...21,309,363 		JBrowse link
G NCDN neurochondrin involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:9398642 GO_REF:0000118 RGD:724406 NCBI chr15:6,573,936...6,583,168
Ensembl chr15:6,574,614...6,583,109 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:48,287,019...48,295,540
Ensembl chr 9:48,287,014...48,294,780 		JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:11814630 RGD:729531 NCBI chr15:41,036,428...41,037,571
Ensembl chr15:41,036,428...41,037,553 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:25865668) MGI PMID:25865668 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RASGRF1 Ras protein specific guanine nucleotide releasing factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11749043) Ensembl
MGI		 PMID:11749043 GO_REF:0000107 NCBI chr 3:57,995,092...58,085,395
Ensembl chr 3:57,995,786...58,085,380 		JBrowse link
G S100B S100 calcium binding protein B acts_upstream_of_or_within ISO (PMID:11891290) MGI PMID:11891290 NCBI chr31:39,783,990...39,788,289
Ensembl chr31:39,784,506...39,788,183 		JBrowse link
G SNCA synuclein alpha acts_upstream_of_or_within ISO (PMID:17610578) MGI PMID:17610578 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:16673174 RGD:1600077 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025 		JBrowse link
G SYP synaptophysin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:42,288,071...42,301,802
Ensembl chr  X:42,288,148...42,299,487 		JBrowse link
G VGF VGF nerve growth factor inducible ISO synthetic rat C-terminal VGF peptides RGD PMID:14645472 RGD:2289061 NCBI chr 6:8,701,289...8,704,386
Ensembl chr 6:8,700,667...8,704,397 		JBrowse link
G ZDHHC2 zinc finger DHHC-type palmitoyltransferase 2 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr16:40,496,469...40,551,979
Ensembl chr16:40,506,524...40,543,360 		JBrowse link
regulation of short-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:25523819) MGI PMID:25523819 NCBI chr 1:112,325,988...112,346,056
Ensembl chr 1:112,325,289...112,346,916 		JBrowse link
G BDNF brain derived neurotrophic factor ISO RGD PMID:12201640 RGD:724690 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:18,252,543...18,266,033
Ensembl chr 6:18,254,139...18,266,033 		JBrowse link
G GRIK1 glutamate ionotropic receptor kainate type subunit 1 ISO RGD PMID:17395219 RGD:1642466 NCBI chr31:24,477,319...24,839,502
Ensembl chr31:24,478,696...24,839,434 		JBrowse link
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11182092) Ensembl
MGI		 PMID:11182092 GO_REF:0000107 NCBI chr12:58,932,754...59,991,305
Ensembl chr12:59,355,017...59,990,408 		JBrowse link
G KMT2A lysine methyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25834037) Ensembl
MGI		 PMID:25834037 GO_REF:0000107 NCBI chr 5:15,212,559...15,302,825
Ensembl chr 5:15,217,348...15,270,971 		JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 ISO RGD PMID:11797009 RGD:633666 NCBI chr 1:107,308,903...107,327,300
Ensembl chr 1:107,319,427...107,331,463 		JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (MGI:3652690|PMID:16782817) ParkinsonsUK-UCL PMID:16782817 MGI:3652690 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501 		JBrowse link
G SHISA6 shisa family member 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:35,420,981...35,701,654
Ensembl chr 5:35,424,242...35,707,012 		JBrowse link
G SHISA7 shisa family member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:102,260,917...102,270,388
Ensembl chr 1:102,261,484...102,268,179 		JBrowse link
G SHISA8 shisa family member 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:23,444,051...23,448,692 JBrowse link
G SHISA9 shisa family member 9 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,801,919...30,083,397
Ensembl chr 6:29,801,904...30,083,420 		JBrowse link
G SLC4A10 solute carrier family 4 member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:7,106,897...7,392,275
Ensembl chr36:7,106,994...7,390,398 		JBrowse link
G SLC8A2 solute carrier family 8 member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,544,825...108,575,894
Ensembl chr 1:108,544,509...108,575,891 		JBrowse link
G SYAP1 synapse associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:12,869,824...12,902,677
Ensembl chr  X:12,869,932...12,901,258 		JBrowse link
G SYNGR1 synaptogyrin 1 involved_in ISO (MGI:1349221|PMID:10595519) UniProt PMID:10595519 MGI:1349221 NCBI chr10:25,685,079...25,735,940
Ensembl chr10:25,687,633...25,713,300 		JBrowse link
G SYP synaptophysin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,288,071...42,301,802
Ensembl chr  X:42,288,148...42,299,487 		JBrowse link
G UNC13A unc-13 homolog A acts_upstream_of_or_within ISO (PMID:11832228) MGI PMID:11832228 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115 		JBrowse link
G UNC13B unc-13 homolog B involved_in
acts_upstream_of_or_within		 ISO (MGI:5795822|PMID:19700493)
(PMID:11832228)		 ParkinsonsUK-UCL
MGI		 PMID:11832228 PMID:19700493 MGI:5795822 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955 		JBrowse link
regulation of synaptic scaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIP1 glutamate receptor interacting protein 1 ISO RGD PMID:26109571 RGD:152995513 NCBI chr10:8,801,023...9,187,684
Ensembl chr10:8,802,529...9,063,848 		JBrowse link
short-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRD chordin involved_in ISO (PMID:17634368) MGI PMID:17634368 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G NCSTN nicastrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24889619) Ensembl
MGI		 PMID:24889619 GO_REF:0000107 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:5560382|PMID:24569478)
(MGI:5707519|PMID:26738595)		 UniProt PMID:24569478 PMID:26738595 MGI:5560382 MGI:5707519 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    biological regulation 12438
      regulation of biological quality 3302
        regulation of synaptic plasticity 361
          long-term synaptic depression + 38
          long-term synaptic potentiation + 216
          negative regulation of synaptic plasticity + 6
          positive regulation of synaptic plasticity + 17
          regulation of long-term synaptic depression + 19
          regulation of long-term synaptic potentiation + 59
          regulation of neuronal synaptic plasticity + 75
          regulation of short-term synaptic potentiation + 1
          regulation of synaptic metaplasticity + 0
          regulation of synaptic plasticity by chemical substance + 1
          regulation of synaptic scaling 1
          short-term synaptic potentiation + 5
Path 2
Term Annotations click to browse term
  biological_process 17917
    biological regulation 12438
      regulation of biological process 12078
        signaling 6873
          cell-cell signaling 1461
            synaptic signaling 985
              trans-synaptic signaling 951
                anterograde trans-synaptic signaling 942
                  chemical synaptic transmission 942
                    modulation of chemical synaptic transmission 725
                      regulation of synaptic plasticity 361
                        long-term synaptic depression + 38
                        long-term synaptic potentiation + 216
                        negative regulation of synaptic plasticity + 6
                        positive regulation of synaptic plasticity + 17
                        regulation of long-term synaptic depression + 19
                        regulation of long-term synaptic potentiation + 59
                        regulation of neuronal synaptic plasticity + 75
                        regulation of short-term synaptic potentiation + 1
                        regulation of synaptic metaplasticity + 0
                        regulation of synaptic plasticity by chemical substance + 1
                        regulation of synaptic scaling 1
                        short-term synaptic potentiation + 5
paths to the root