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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synaptic plasticity
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Accession:GO:0048167 term browser browse the term
Definition:A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.
Comment:Note that the syntax of the definition of this term is different from the usual regulation syntax because it describes regulation of a trait rather than regulation of a process.


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regulation of synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1_v2 actinin, alpha 1, variant 2 NAS RGD PMID:12099693 RGD:625419
G Actn1_v3 actinin, alpha 1, variant 3 NAS RGD PMID:12099693 RGD:625419
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:5643972|PMID:25751059) RGD PMID:25751059 MGI:5643972 NCBI chr 7:106,404,844...106,476,902
Ensembl chr 7:106,404,958...106,476,902
JBrowse link
G Alg13 ALG13, UDP-N-acetylglucosaminyltransferase subunit acts_upstream_of_or_within ISO MGI:6358168 (MGI:6306805|PMID:30872163) RGD PMID:30872163 MGI:6306805 NCBI chr  X:107,885,039...107,906,264
Ensembl chr  X:107,885,064...107,893,002
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:2671714|PMID:12925279)
UniProt
RGD
PMID:12925279 GO_REF:0000024 MGI:2671714 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:3709537|PMID:17409239) RGD PMID:17409239 MGI:3709537 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 acts_upstream_of_or_within ISO MGI:3835373 (MGI:3846509|PMID:19208628) RGD PMID:19208628 MGI:3846509 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3654775|PMID:16819522), (MGI:3703330|PMID:17442827) RGD PMID:16819522 PMID:17442827 MGI:3654775 MGI:3703330 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (MGI:5707546|PMID:26444684) RGD PMID:26444684 MGI:5707546 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
JBrowse link
G Cabp1 calcium binding protein 1 NAS RGD PMID:11865310 RGD:632449 NCBI chr12:41,385,234...41,448,930
Ensembl chr12:41,378,897...41,448,927
JBrowse link
G Calb1 calbindin 1 IMP RGD PMID:15318329 RGD:1358474 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Camk2n2 calcium/calmodulin-dependent protein kinase II inhibitor 2 TAS RGD PMID:9724800 RGD:1302397 NCBI chr11:80,289,702...80,290,829 JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IMP PMID:18498738 RGD
UniProt
PMID:11675505 PMID:18498738 RGD:69667, RGD:8553496 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5521401|PMID:24155305) RGD PMID:24155305 MGI:5521401 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP RGD PMID:17079348 RGD:1626232 NCBI chr10:89,040,203...89,083,481
Ensembl chr10:89,040,203...89,083,481
JBrowse link
G Ctnnd2 catenin delta 2 acts_upstream_of_or_within ISO MGI:3056606 (MGI:3056253|PMID:15380068) RGD PMID:15380068 MGI:3056253 NCBI chr 2:81,168,976...82,016,495
Ensembl chr 2:81,167,117...82,015,764
JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 involved_in ISO (MGI:3607012|PMID:16237163), (MGI:4820682|PMID:20347422) RGD PMID:16237163 PMID:20347422 MGI:3607012 MGI:4820682 NCBI chr20:29,379,444...29,400,131
Ensembl chr20:29,382,668...29,399,946
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776
JBrowse link
G Fgf14 fibroblast growth factor 14 acts_upstream_of_or_within IMP PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr15:101,045,038...101,679,888
Ensembl chr15:101,045,036...101,679,900
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 acts_upstream_of_or_within ISO MGI:3663921 (MGI:3654775|PMID:16819522) RGD PMID:16819522 MGI:3654775 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in NAS
IMP
PMID:15269270
PMID:12536214
UniProt PMID:15269270 PMID:12536214 RGD:8553901, RGD:8553676 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 involved_in TAS PMID:12533604 UniProt PMID:12533604 RGD:1642497 NCBI chr11:27,169,739...27,571,131
Ensembl chr11:27,169,740...27,570,645
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:2177650 (MGI:3036924|PMID:15003177), (MGI:84849|PMID:8980239), (MGI:84850|PMID:8980238), (MGI:893741|PMID:9246451) RGD PMID:8980238 PMID:8980239 PMID:9246451 PMID:15003177 MGI:3036924 MGI:84849 MGI:84850 MGI:893741 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in ISO (MGI:3687911|PMID:12427824) RGD PMID:12427824 MGI:3687911 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO MGI:3701351 (MGI:3621670|PMID:11719203), (MGI:3701026|PMID:16710293) RGD PMID:11719203 PMID:16710293 MGI:3621670 MGI:3701026 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Hrh1 histamine receptor H 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182945 (MGI:3703474|PMID:17145090)
Ensembl
RGD
PMID:17145090 GO_REF:0000107 MGI:3703474 NCBI chr 4:147,564,781...147,649,353
Ensembl chr 4:147,645,995...147,647,455
JBrowse link
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949 (MGI:3703474|PMID:17145090) RGD PMID:17145090 MGI:3703474 NCBI chr17:10,368,355...10,407,791
Ensembl chr17:10,368,298...10,407,631
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1861934|MGI:1861935 (MGI:1336480|PMID:10196373), (MGI:3703330|PMID:17442827) RGD PMID:10196373 PMID:17442827 MGI:1336480 MGI:3703330 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 involved_in ISO (MGI:5790016|PMID:26595655) RGD PMID:26595655 MGI:5790016 NCBI chr11:61,733,139...61,884,059
Ensembl chr11:61,733,144...61,868,348
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO MGI:2152168 (MGI:4398774|PMID:19890013) RGD PMID:19890013 MGI:4398774 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
JBrowse link
G Jph3 junctophilin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,793,967...49,855,338
Ensembl chr19:49,793,092...49,855,338
JBrowse link
G Jph4 junctophilin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1891497 (MGI:3714568|PMID:17347645)
PMID:21873635
Ensembl
RGD
PMID:17347645 PMID:21873635 GO_REF:0000107 MGI:3714568, RGD:13792537 NCBI chr15:28,579,579...28,588,903
Ensembl chr15:28,571,568...28,587,573
JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (MGI:5604073|PMID:25024434) RGD PMID:25024434 MGI:5604073 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in NAS
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:12415013 PMID:21873635 PMID:15703396 RGD:1299532, RGD:13792537, RGD:1600102 NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2183727 (MGI:3611151|PMID:16399702) RGD PMID:16399702 MGI:3611151 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:5559663|PMID:22496871)
UniProt
RGD
PMID:22496871 GO_REF:0000024 MGI:5559663 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO MGI:1856555 (MGI:3654775|PMID:16819522) RGD PMID:16819522 MGI:3654775 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 IMP RGD PMID:12954875 RGD:1580247 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826741|PMID:18815592)
UniProt
RGD
PMID:18815592 GO_REF:0000024 MGI:3826741 NCBI chr 1:202,281,260...202,298,681
Ensembl chr 1:202,281,958...202,286,724
JBrowse link
G Ntf4 neurotrophin 4 NAS RGD PMID:15193526 RGD:1358401 NCBI chr 1:95,893,560...95,896,391
Ensembl chr 1:95,893,457...95,897,243
JBrowse link
G P2rx3 purinergic receptor P2X 3 acts_upstream_of_or_within ISO MGI:1934019 (MGI:3703496|PMID:17074061) RGD PMID:17074061 MGI:3703496 NCBI chr 3:70,080,850...70,124,664
Ensembl chr 3:70,080,851...70,125,178
JBrowse link
G Plat plasminogen activator, tissue type IEP RGD PMID:12070304 RGD:628337 NCBI chr16:69,240,582...69,265,177
Ensembl chr16:69,240,585...69,268,223
JBrowse link
G Plk2 polo-like kinase 2 involved_in IMP
ISO
IDA
TAS
IBA
PMID:18498738
(MGI:5140682|PMID:21382555)
PMID:10523297
PMID:21873635
RGD PMID:21382555 PMID:18498738 PMID:21382555 PMID:10523297 PMID:21873635 MGI:5140682, RGD:8553496, RGD:7241548, RGD:61555, RGD:13792537 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
JBrowse link
G Plk3 polo-like kinase 3 involved_in TAS PMID:10523297 UniProt PMID:10523297 RGD:61555 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 TAS RGD PMID:12270687 RGD:633701 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284|MGI:1930934 (MGI:3041370|PMID:15066262), (MGI:3622609|PMID:11814648) RGD PMID:11814648 PMID:15066262 MGI:3041370 MGI:3622609 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (MGI:3041370|PMID:15066262) RGD PMID:15066262 MGI:3041370 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Ptn pleiotrophin involved_in ISS
ISO
GO_REF:0000024
(MGI:2136679|PMID:11414790)
UniProt
RGD
PMID:11414790 GO_REF:0000024 MGI:2136679 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in IDA PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
JBrowse link
G Rara retinoic acid receptor, alpha IDA RGD PMID:18957222 RGD:2314254 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rasgrf1 RAS protein-specific guanine nucleotide-releasing factor 1 involved_in IDA PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 8:90,445,154...90,574,274
Ensembl chr 8:90,445,154...90,574,269
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
G Sct secretin involved_in ISS
ISO
GO_REF:0000024
(MGI:3814626|PMID:18534766)
UniProt
RGD
PMID:18534766 GO_REF:0000024 MGI:3814626 NCBI chr 1:196,382,941...196,383,635
Ensembl chr 1:196,382,856...196,383,658
JBrowse link
G Sctr secretin receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:3690260|PMID:17008357)
UniProt
RGD
PMID:17008357 GO_REF:0000024 MGI:3690260 NCBI chr13:31,127,781...31,190,162
Ensembl chr13:31,127,858...31,180,189
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within ISO MGI:5056336 (MGI:5013997|PMID:21558424) RGD PMID:21558424 MGI:5013997 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:21382555
PMID:18498738
RGD
UniProt
PMID:15703396 PMID:21382555 PMID:18498738 RGD:1600102, RGD:7241548, RGD:8553496 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 involved_in IDA PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
JBrowse link
G Vgf VGF nerve growth factor inducible involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,637,313...19,645,123
Ensembl chr12:19,637,320...19,640,341
JBrowse link
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma involved_in ISO
ISS
(PMID:11824616)
GO_REF:0000024
RGD
UniProt
PMID:11824616 GO_REF:0000024 NCBI chr12:20,744,500...20,772,828
Ensembl chr12:20,744,535...20,772,827
JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 acts_upstream_of_or_within ISO MGI:3796166|MGI:5474781 (MGI:6489652|PMID:33158444), (MGI:6507270|PMID:25709106) RGD PMID:25709106 PMID:33158444 MGI:6489652 MGI:6507270 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568
JBrowse link
induction of synaptic plasticity by chemical substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map1b microtubule-associated protein 1B IEP RGD PMID:15374099 RGD:2304033 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
JBrowse link
long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase acts_upstream_of_or_within ISO (MGI:4829719|PMID:20657592) RGD PMID:20657592 MGI:4829719 NCBI chr15:16,859,740...16,907,094
Ensembl chr15:16,859,738...16,906,985
JBrowse link
G Arf1 ADP-ribosylation factor 1 involved_in IDA PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434
JBrowse link
G Cd38 CD38 molecule IMP RGD PMID:10097163 RGD:2307271 NCBI chr14:67,172,062...67,212,328
Ensembl chr14:67,172,063...67,211,986
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857158 (MGI:3036431|PMID:14981263)
Ensembl
RGD
PMID:14981263 GO_REF:0000107 MGI:3036431 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd5 dopamine receptor D5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3586401|PMID:13679419)
Ensembl
RGD
PMID:13679419 GO_REF:0000107 MGI:3586401 NCBI chr14:72,489,347...72,490,774
Ensembl chr14:72,489,347...72,490,774
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99401 (MGI:5529732|PMID:24259587)
Ensembl
RGD
PMID:24259587 GO_REF:0000107 MGI:5529732 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Grid2ip Grid2 interacting protein acts_upstream_of_or_within ISO MGI:3796575 (MGI:3796257|PMID:18509461) RGD PMID:18509461 MGI:3796257 NCBI chr12:11,166,567...11,203,765
Ensembl chr12:11,167,874...11,203,676
JBrowse link
G Mgll monoglyceride lipase acts_upstream_of_or_within ISO (MGI:4829719|PMID:20657592) RGD PMID:20657592 MGI:4829719 NCBI chr 4:121,192,187...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IDA PMID:21252856 UniProt PMID:21252856 RGD:8554238 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Plk2 polo-like kinase 2 involved_in IDA PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
JBrowse link
G Prrt1 proline-rich transmembrane protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6446632|PMID:31216424)
UniProt
RGD
PMID:31216424 GO_REF:0000024 MGI:6446632 NCBI chr20:4,117,957...4,121,643
Ensembl chr20:4,117,957...4,121,600
JBrowse link
G Pten phosphatase and tensin homolog IMP NMDA receptor-dependent RGD PMID:20628354 RGD:4144068 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:20826662 RGD:10041066 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5432970|PMID:22699620)
BHF-UCL
RGD
PMID:22699620 GO_REF:0000024 MGI:5432970 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5320264|PMID:21795692)
Ensembl
RGD
PMID:21795692 GO_REF:0000107 MGI:5320264 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Slc24a1 solute carrier family 24 member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:65,440,842...65,466,001
Ensembl chr 8:65,440,730...65,466,001
JBrowse link
G Slc24a2 solute carrier family 24 member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3663782 (MGI:3640012|PMID:16407245)
RGD PMID:16407245 PMID:21873635 MGI:3640012, RGD:13792537 NCBI chr 5:101,499,536...101,739,337
Ensembl chr 5:101,502,278...101,739,337
JBrowse link
G Sorcs2 sortilin-related VPS10 domain containing receptor 2 involved_in ISO (MGI:6305031|PMID:27457814) RGD PMID:27457814 MGI:6305031 NCBI chr14:74,371,089...74,735,943
Ensembl chr14:74,371,415...74,735,943
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2385465|MGI:2678305 (MGI:3652465|PMID:16600861) RGD PMID:16600861 MGI:3652465 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO MGI:2183278 (MGI:3695670|PMID:17110441) RGD PMID:17110441 MGI:3695670 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:3620008|MGI:3622450 (MGI:3620005|PMID:16342120) RGD PMID:16342120 MGI:3620005 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta acts_upstream_of_or_within IMP PMID:2549638 MGI PMID:2549638 RGD:8553576 NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:2177650|MGI:5570192 (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
JBrowse link
G Crh corticotropin releasing hormone IDA RGD PMID:20807310 RGD:5491009 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP RGD PMID:19376201 RGD:5130954 NCBI chr10:89,040,203...89,083,481
Ensembl chr10:89,040,203...89,083,481
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:19376201 PMID:21873635 PMID:17004937 RGD:5130954, RGD:13792537, RGD:5131266 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein acts_upstream_of_or_within ISO (MGI:3717553|PMID:17150371) RGD PMID:17150371 MGI:3717553 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857158|MGI:2159306 (MGI:3036431|PMID:14981263), (MGI:3586401|PMID:13679419), (MGI:3610662|PMID:9427321)
Ensembl
RGD
PMID:9427321 PMID:13679419 PMID:14981263 GO_REF:0000107 MGI:3036431 MGI:3586401 MGI:3610662 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21425206 RGD:5131650 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO MGI:1857176 (MGI:1889059|PMID:8692820) RGD PMID:8692820 MGI:1889059 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
JBrowse link
G Gip gastric inhibitory polypeptide IDA RGD PMID:18234983 RGD:2312531 NCBI chr10:80,968,410...80,976,506
Ensembl chr10:80,968,352...80,976,503
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:109137|MGI:1346858|MGI:95821 (MGI:3770075|PMID:16901514), (MGI:4821029|PMID:20661302)
PMID:21873635
Ensembl
RGD
PMID:16901514 PMID:20661302 PMID:21873635 GO_REF:0000107 MGI:3770075 MGI:4821029, RGD:13792537 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:95820 (MGI:3770075|PMID:16901514), (MGI:4821029|PMID:20661302)
RGD PMID:16901514 PMID:20661302 PMID:21873635 MGI:3770075 MGI:4821029, RGD:13792537 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:100,488,430...100,507,083
Ensembl chr10:100,488,431...100,506,427
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,306,871...96,346,994
Ensembl chr 1:96,308,365...96,344,793
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 IMP RGD PMID:19660530 RGD:2316998 NCBI chr 5:151,295,269...151,312,853
Ensembl chr 5:151,296,662...151,311,912
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:22314569 RGD:6480664 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857070 (MGI:3797167|PMID:18417102)
Ensembl
RGD
PMID:18417102 GO_REF:0000107 MGI:3797167 NCBI chr20:5,136,968...5,202,339
Ensembl chr20:5,136,441...5,202,337
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO MGI:2389174 (MGI:5515239|PMID:23931994) RGD PMID:23931994 MGI:5515239 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO MGI:2389173 (MGI:5515239|PMID:23931994) RGD PMID:23931994 MGI:5515239 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO MGI:95820 (MGI:4821029|PMID:20661302) RGD PMID:20661302 MGI:4821029 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137311 (MGI:3612295|PMID:16087343)
Ensembl
RGD
PMID:16087343 GO_REF:0000107 MGI:3612295 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mir100 microRNA 100 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
JBrowse link
G Mir101-2 microRNA 101-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
JBrowse link
G Mir101a microRNA 101a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
JBrowse link
G Mir106a microRNA 106a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661
JBrowse link
G Mir106b microRNA 106b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir125b1 microRNA 125b-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir125b2 microRNA 125b-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir126a microRNA 126a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 3:9,415,063...9,415,180
Ensembl chr 3:9,415,063...9,415,180
JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311
JBrowse link
G Mir128-1 microRNA 128-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
JBrowse link
G Mir128-2 microRNA 128-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
JBrowse link
G Mir129-1 microRNA 129-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 4:57,624,295...57,624,366
Ensembl chr 4:57,624,295...57,624,366
JBrowse link
G Mir130a microRNA 130a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
JBrowse link
G Mir132 microRNA 132 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
JBrowse link
G Mir134 microRNA 134 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,748,908...128,748,980 JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
JBrowse link
G Mir138-1 microRNA 138-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064
JBrowse link
G Mir138-2 microRNA 138-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274
JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
JBrowse link
G Mir148b microRNA 148b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 7:134,421,398...134,421,494
Ensembl chr 7:134,421,398...134,421,494
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
JBrowse link
G Mir151 microRNA 151 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 7:105,172,377...105,172,473 JBrowse link
G Mir153 microRNA 153 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:138,163,595...138,163,681
Ensembl chr 6:138,163,595...138,163,681
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir181a2 microRNA 181a-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
JBrowse link
G Mir181b1 microRNA 181b-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir181c microRNA 181c acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628
JBrowse link
G Mir181d microRNA 181d acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr19:23,983,706...23,983,788
Ensembl chr19:23,983,706...23,983,788
JBrowse link
G Mir187 microRNA 187 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr18:15,731,194...15,731,297
Ensembl chr18:15,731,194...15,731,297
JBrowse link
G Mir191 microRNA 191 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:109,264,098...109,264,188 JBrowse link
G Mir195 microRNA 195 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr10:54,951,838...54,951,924
Ensembl chr10:54,951,838...54,951,924
JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir19b2 microRNA 19b-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:132,422,072...132,422,167
Ensembl chr  X:132,422,072...132,422,167
JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir211 microRNA 211 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:117,777,539...117,777,644
Ensembl chr 1:117,777,539...117,777,644
JBrowse link
G Mir218-2 microRNA 218-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr10:20,068,451...20,068,560
Ensembl chr10:20,068,451...20,068,560
JBrowse link
G Mir22 microRNA 22 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr10:60,307,039...60,307,133
Ensembl chr10:60,307,039...60,307,133
JBrowse link
G Mir221 microRNA 221 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573
JBrowse link
G Mir222 microRNA 222 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr17:1,813,667...1,813,763
Ensembl chr17:1,813,667...1,813,763
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Mir25 microRNA 25 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr12:17,042,932...17,043,015
Ensembl chr12:17,042,932...17,043,015
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680
JBrowse link
G Mir28 microRNA 28 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr11:75,975,523...75,975,608
Ensembl chr11:75,975,523...75,975,608
JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 4:59,650,608...59,650,695 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
JBrowse link
G Mir301b microRNA 301b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr11:83,879,816...83,879,893
Ensembl chr11:83,879,816...83,879,893
JBrowse link
G Mir30a microRNA 30a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 9:25,737,600...25,737,670
Ensembl chr 9:25,737,600...25,737,670
JBrowse link
G Mir30b microRNA 30b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 7:100,136,391...100,136,472
Ensembl chr 7:100,136,391...100,136,472
JBrowse link
G Mir30e microRNA 30e acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 5:134,352,232...134,352,323
Ensembl chr 5:134,352,232...134,352,323
JBrowse link
G Mir320a microRNA 320a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
JBrowse link
G Mir324 microRNA 324 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr10:54,734,680...54,734,762
Ensembl chr10:54,734,678...54,734,766
JBrowse link
G Mir328 microRNA 328 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr19:33,184,766...33,184,849
Ensembl chr19:33,184,766...33,184,849
JBrowse link
G Mir330 microRNA 330 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:78,833,178...78,833,274
Ensembl chr 1:78,833,178...78,833,274
JBrowse link
G Mir337 microRNA 337 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,538,903...128,538,999
Ensembl chr 6:128,538,902...128,538,998
JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
JBrowse link
G Mir345 microRNA 345 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:127,754,027...127,754,122
Ensembl chr 6:127,754,027...127,754,122
JBrowse link
G Mir381 microRNA 381 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,740,976...128,741,036 JBrowse link
G Mir383 microRNA 383 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr16:54,040,340...54,040,413
Ensembl chr16:54,040,340...54,040,413
JBrowse link
G Mir410 microRNA 410 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,758,358...128,758,433
Ensembl chr 6:128,758,354...128,758,434
JBrowse link
G Mir411 microRNA 411 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,723,189...128,723,264
Ensembl chr 6:128,723,184...128,723,279
JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 8:109,264,555...109,264,637
Ensembl chr 8:109,264,555...109,264,637
JBrowse link
G Mir433 microRNA 433 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,545,119...128,545,211
Ensembl chr 6:128,545,112...128,545,217
JBrowse link
G Mir484 microRNA 484 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr10:887,684...887,760 JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435
G Mir487b microRNA 487b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,741,485...128,741,566
Ensembl chr 6:128,741,485...128,741,566
JBrowse link
G Mir500 microRNA 500 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:15,258,778...15,258,857
Ensembl chr  X:15,258,768...15,258,859
JBrowse link
G Mir541 microRNA 541 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,757,016...128,757,105
Ensembl chr 6:128,757,016...128,757,105
JBrowse link
G Mir551b microRNA 551b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 2:113,989,203...113,989,300
Ensembl chr 2:113,989,203...113,989,300
JBrowse link
G Mir652 microRNA 652 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:106,343,293...106,343,373
Ensembl chr  X:106,343,293...106,343,373
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
JBrowse link
G Mir760 microRNA 760 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 2:210,392,616...210,392,695
Ensembl chr 2:210,392,616...210,392,695
JBrowse link
G Mir770 microRNA 770 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 6:128,515,843...128,515,918
Ensembl chr 6:128,515,835...128,515,928
JBrowse link
G Mir7b microRNA 7b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 9:1,080,274...1,080,383
Ensembl chr 9:1,080,274...1,080,383
JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
JBrowse link
G Mir92a2 microRNA 92a-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:132,421,942...132,422,033
Ensembl chr  X:132,421,942...132,422,033
JBrowse link
G Mir92b microRNA 92b acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 2:174,633,890...174,633,972
Ensembl chr 2:174,633,890...174,633,972
JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342
JBrowse link
G Mir99a microRNA 99a acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr11:16,200,443...16,200,523
Ensembl chr11:16,200,443...16,200,523
JBrowse link
G Mirlet7c1 microRNA let-7c-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
JBrowse link
G Mirlet7c2 microRNA let-7c-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
JBrowse link
G Mirlet7d microRNA let-7d acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr17:16,115,893...16,115,990
Ensembl chr17:16,115,893...16,115,990
JBrowse link
G Mirlet7f1 microRNA let-7f-1 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr17:16,114,130...16,114,226
Ensembl chr17:16,114,130...16,114,226
JBrowse link
G Mirlet7f2 microRNA let-7f-2 acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr  X:20,980,632...20,980,714
Ensembl chr  X:20,980,632...20,980,714
JBrowse link
G Mirlet7i microRNA let-7i acts_upstream_of_or_within ISO (MGI:5645435|PMID:25858512) RGD PMID:25858512 MGI:5645435 NCBI chr 7:58,642,485...58,642,569
Ensembl chr 7:58,642,480...58,642,571
JBrowse link
G Mpp2 membrane palmitoylated protein 2 involved_in ISO (MGI:5766670|PMID:26880549) RGD PMID:26880549 MGI:5766670 NCBI chr10:87,011,434...87,043,883
Ensembl chr10:87,011,434...87,043,896
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:16870737 RGD:2317092 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 involved_in ISO (MGI:5426290|PMID:22586092) RGD PMID:22586092 MGI:5426290 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
G Nlgn1 neuroligin 1 IMP RGD PMID:23083734 RGD:9831154 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) RGD PMID:21808020 MGI:5286761 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Nptn neuroplastin involved_in IDA PMID:16925595 UniProt PMID:16925595 RGD:8554143 NCBI chr 8:58,996,876...59,063,402
Ensembl chr 8:58,996,887...59,063,401
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (MGI:3615859|PMID:16289828) RGD PMID:16289828 MGI:3615859 NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:3772008|PMID:12367511)
Ensembl
RGD
PMID:12367511 GO_REF:0000107 MGI:3772008 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
JBrowse link
G Plk2 polo-like kinase 2 involved_in IDA PMID:21382555 UniProt PMID:21382555 RGD:7241548 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
JBrowse link
G Prkcg protein kinase C, gamma IDA RGD PMID:10501452 RGD:28867228 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Prkcz protein kinase C, zeta involved_in IMP PMID:11914719 UniProt PMID:11914719 RGD:8554098 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Prrt1 proline-rich transmembrane protein 1 acts_upstream_of_or_within ISO MGI:3812714 (MGI:6150569|PMID:29490264) RGD PMID:29490264 MGI:6150569 NCBI chr20:4,117,957...4,121,643
Ensembl chr20:4,117,957...4,121,600
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IMP PMID:11239437 Alzheimers_University_of_Toronto PMID:11239437 RGD:8553497 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:8904779 RGD:9831451 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Rasgrf2 RAS protein-specific guanine nucleotide-releasing factor 2 acts_upstream_of_or_within ISO MGI:95820 (MGI:4821029|PMID:20661302) RGD PMID:20661302 MGI:4821029 NCBI chr 2:23,113,613...23,361,537 JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:5426130|PMID:21852430)
Ensembl
RGD
PMID:21852430 GO_REF:0000107 MGI:5426130 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Rgs14 regulator of G-protein signaling 14 involved_in ISS
ISO
GO_REF:0000024
(MGI:4834960|PMID:20837545)
UniProt
RGD
PMID:20837545 GO_REF:0000024 MGI:4834960 NCBI chr17:9,248,982...9,263,104
Ensembl chr17:9,249,019...9,263,104
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 IMP RGD PMID:21849565 RGD:5686386 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G S100b S100 calcium binding protein B IEP RGD PMID:21546003 RGD:5508826 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387774 (MGI:892672|PMID:9169529)
Ensembl
RGD
PMID:9169529 GO_REF:0000107 MGI:892672 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5432970|PMID:22699620)
BHF-UCL
RGD
PMID:22699620 GO_REF:0000024 MGI:5432970 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5013997|PMID:21558424)
Ensembl
RGD
PMID:21558424 GO_REF:0000107 MGI:5013997 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in
ISO MGI:2655190 (MGI:4415643|PMID:19923291)
(MGI:6113717|PMID:29229708)
RGD PMID:19923291 PMID:29229708 MGI:4415643 MGI:6113717 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc24a1 solute carrier family 24 member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:65,440,842...65,466,001
Ensembl chr 8:65,440,730...65,466,001
JBrowse link
G Slc24a2 solute carrier family 24 member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3663782 (MGI:3640012|PMID:16407245)
RGD PMID:16407245 PMID:21873635 MGI:3640012, RGD:13792537 NCBI chr 5:101,499,536...101,739,337
Ensembl chr 5:101,502,278...101,739,337
JBrowse link
G Slc8a2 solute carrier family 8 member A2 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(MGI:2664655|PMID:12818181)
(MGI:6282180|PMID:29274751)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12818181 PMID:29274751 GO_REF:0000024 GO_REF:0000107 MGI:2664655 MGI:6282180 NCBI chr 1:76,816,583...76,852,928
Ensembl chr 1:76,808,725...76,847,072
JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:6282180|PMID:29274751)
(MGI:5013898|PMID:21593315)
UniProt
RGD
PMID:21593315 PMID:29274751 GO_REF:0000024 MGI:5013898 MGI:6282180 NCBI chr 6:100,874,359...101,007,989
Ensembl chr 6:100,874,369...101,007,508
JBrowse link
G Snap25 synaptosome associated protein 25 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5494785|PMID:23395379)
Ensembl
RGD
PMID:23395379 GO_REF:0000107 MGI:5494785 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snap47 synaptosome associated protein 47 acts_upstream_of_or_within ISO (MGI:5494785|PMID:23395379) RGD PMID:23395379 MGI:5494785 NCBI chr10:44,192,886...44,234,435
Ensembl chr10:44,191,218...44,234,424
JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2154692 (MGI:3789831|PMID:17689254) RGD PMID:17689254 MGI:3789831 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Stx3 syntaxin 3 acts_upstream_of_or_within ISO (MGI:5494785|PMID:23395379) RGD PMID:23395379 MGI:5494785 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:20434989)
Ensembl
RGD
PMID:20434989 GO_REF:0000107 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Syt12 synaptotagmin 12 involved_in ISO (MGI:5498594|PMID:23739973) RGD PMID:23739973 MGI:5498594 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154583 (MGI:3712708|PMID:17537973), (MGI:3762112|PMID:11161481)
Ensembl
RGD
PMID:11161481 PMID:17537973 GO_REF:0000107 MGI:3712708 MGI:3762112 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5819322|PMID:27668656)
UniProt
RGD
PMID:27668656 GO_REF:0000024 MGI:5819322 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
G Unc13a unc-13 homolog A IMP RGD PMID:21849565 RGD:5686386 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 acts_upstream_of_or_within ISO (MGI:5494785|PMID:23395379) RGD PMID:23395379 MGI:5494785 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
negative regulation of long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor acts_upstream_of_or_within ISO MGI:95808 (MGI:5529732|PMID:24259587) RGD PMID:24259587 MGI:5529732 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in ISO
IEA
ComplexPortal:CPX-1134 (PMID:20739563)
GO_REF:0000107
RGD
Ensembl
PMID:20739563 GO_REF:0000107 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2136541|PMID:11438589)
UniProt
RGD
PMID:11438589 GO_REF:0000024 MGI:2136541 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
negative regulation of long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO ComplexPortal:CPX-1134|UniProtKB:Q03137 (MGI:5588508|PMID:24658113) RGD PMID:24658113 MGI:5588508 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:14596853 RGD:1625717 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in ISO
IEA
UniProtKB:P05067 (PMID:15457210)
GO_REF:0000107
ComplexPortal:CPX-1134 (MGI:6094326|PMID:18367618)
RGD
Ensembl
PMID:15457210 PMID:18367618 GO_REF:0000107 MGI:6094326 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Apoe apolipoprotein E involved_in ISO
IEA
(PMID:16273551)
GO_REF:0000107
RGD
Ensembl
PMID:16273551 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:19118188)
UniProtKB:Q15109|UniProtKB:Q61391 (PMID:15457210), (PMID:16636059)
RGD PMID:15457210 PMID:16636059 PMID:19118188 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 IMP RGD PMID:23855980 RGD:9491766 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Epha4 Eph receptor A4 involved_in ISO ComplexPortal:CPX-1134|UniProtKB:P00520 (MGI:5588508|PMID:24658113) RGD PMID:24658113 MGI:5588508 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISS
ISO
GO_REF:0000024
(MGI:6162291|PMID:21969592)
UniProt
RGD
PMID:21969592 GO_REF:0000024 MGI:6162291 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:16899074 RGD:10002752 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
G Prnp prion protein involved_in IDA PMID:21593310 ARUK-UCL PMID:21593310 RGD:12790639 NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
JBrowse link
G Ptn pleiotrophin involved_in ISS
ISO
GO_REF:0000024
(MGI:2136679|PMID:11414790), (MGI:2181835|PMID:12093164)
UniProt
RGD
PMID:11414790 PMID:12093164 GO_REF:0000024 MGI:2136679 MGI:2181835 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp involved_in ISO (MGI:3531596|PMID:15601948) RGD PMID:15601948 MGI:3531596 NCBI chr 1:85,672,931...85,676,856
Ensembl chr 1:85,672,994...85,676,848
JBrowse link
negative regulation of short-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in ISO (MGI:5796263|PMID:15390175) RGD PMID:15390175 MGI:5796263 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
negative regulation of short-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrt2 proline-rich transmembrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6114881|PMID:29056747)
UniProt
RGD
PMID:29056747 GO_REF:0000024 MGI:6114881 NCBI chr 1:181,625,243...181,628,905
Ensembl chr 1:181,604,545...181,628,850
JBrowse link
negative regulation of synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:3720892|MGI:3720937 (MGI:3720432|PMID:17529984) RGD PMID:17529984 MGI:3720432 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IMP RGD PMID:22918985 RGD:7174737 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Rgs14 regulator of G-protein signaling 14 involved_in ISS
ISO
GO_REF:0000024
(MGI:4834960|PMID:20837545)
UniProt
RGD
PMID:20837545 GO_REF:0000024 MGI:4834960 NCBI chr17:9,248,982...9,263,104
Ensembl chr17:9,249,019...9,263,104
JBrowse link
G Rin1 Ras and Rab interactor 1 acts_upstream_of_or_within ISO MGI:2451226 (MGI:2450229|PMID:12574403) RGD PMID:12574403 MGI:2450229 NCBI chr 1:202,355,729...202,362,731
Ensembl chr 1:202,355,890...202,362,729
JBrowse link
G Unc13b unc-13 homolog B involved_in ISO UniProtKB:Q8K0T7 (MGI:5490921|PMID:23658173) RGD PMID:23658173 MGI:5490921 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q9Z1N9 (MGI:5490921|PMID:23658173)
Ensembl
RGD
PMID:23658173 GO_REF:0000107 MGI:5490921 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
positive regulation of long-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:14699417 RGD:4891114 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within ISO MGI:2149765 (MGI:2155573|PMID:11754836) RGD PMID:11754836 MGI:2155573 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Fmr1 FMRP translational regulator 1 IMP RGD PMID:28894415 RGD:38501107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Grm5 glutamate metabotropic receptor 5 IDA RGD PMID:12740378 RGD:731147 NCBI chr 1:141,310,069...141,884,980
Ensembl chr 1:141,312,368...141,882,274
JBrowse link
G Kdr kinase insert domain receptor IMP RGD PMID:18221855 RGD:2292019 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:11112797 RGD:2292520 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5300629|PMID:22153079) RGD PMID:22153079 MGI:5300629 NCBI chr 1:246,066,642...246,152,890
Ensembl chr 1:246,067,100...246,152,903
JBrowse link
G Nptn neuroplastin involved_in IMP PMID:10759566 HGNC-UCL PMID:10759566 RGD:8553916 NCBI chr 8:58,996,876...59,063,402
Ensembl chr 8:58,996,887...59,063,401
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285139|PMID:21167025)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21167025 GO_REF:0000024 GO_REF:0000107 MGI:5285139 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
positive regulation of long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy8 adenylate cyclase 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1860567|PMID:10864938)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10864938 GO_REF:0000024 GO_REF:0000107 MGI:1860567 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (PMID:27418511) RGD PMID:27418511 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Fmr1 FMRP translational regulator 1 IMP RGD PMID:28894415 RGD:38501107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27418511)
Ensembl
RGD
PMID:27418511 GO_REF:0000107 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 IMP RGD PMID:27009485 RGD:11049506 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5634878|PMID:24494598)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24494598 GO_REF:0000024 GO_REF:0000107 MGI:5634878 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
JBrowse link
G Mapt microtubule-associated protein tau IMP RGD PMID:24298146 RGD:10412705 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Pirb paired Ig-like receptor B involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5511064|PMID:24052308) RGD PMID:24052308 MGI:5511064
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:16899074 RGD:10002752 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:21508097 RGD:10043164 NCBI chr 5:2,840,801...3,084,451 JBrowse link
positive regulation of long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (MGI:1344240|PMID:10482244) RGD PMID:10482244 MGI:1344240 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Adcy8 adenylate cyclase 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:1344240|PMID:10482244)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10482244 GO_REF:0000024 GO_REF:0000107 MGI:1344240 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Adora2a adenosine A2a receptor IMP RGD PMID:14596853 RGD:1625717 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Adrb1 adrenoceptor beta 1 IDA RGD PMID:21848869 RGD:8693685 NCBI chr 1:255,772,217...255,773,617
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Akap5 A-kinase anchoring protein 5 involved_in ISO (PMID:25589740) RGD PMID:25589740 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
JBrowse link
G App amyloid beta precursor protein involved_in ISO UniProtKB:P49582 (PMID:20974225)
ComplexPortal:CPX-1134|UniProtKB:P49582 (PMID:19118188)
RGD PMID:19118188 PMID:20974225 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA
ISO
GO_REF:0000107
ComplexPortal:CPX-1134|UniProtKB:P05067|UniProtKB:P05067:PRO_0000000092 (MGI:4889154|PMID:20974225), (MGI:5825427|PMID:19118188)
Ensembl
RGD
PMID:19118188 PMID:20974225 GO_REF:0000107 MGI:4889154 MGI:5825427 NCBI chr 1:116,715,286...116,837,223
Ensembl chr 1:116,714,711...116,837,240
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5648736|PMID:26074003) RGD PMID:26074003 MGI:5648736 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:16000619 RGD:10059422 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 IMP RGD PMID:17183642 RGD:9685167 NCBI chr16:18,988,197...19,046,913
Ensembl chr16:18,988,250...19,043,381
JBrowse link
G Drd1 dopamine receptor D1 IMP RGD PMID:20377617 RGD:6907453 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 IMP RGD PMID:20377617 RGD:6907453 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3589053|PMID:16121183)
UniProt
RGD
PMID:16121183 GO_REF:0000024 MGI:3589053 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:4867584|PMID:21113149) RGD PMID:21113149 MGI:4867584 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Fmr1 FMRP translational regulator 1 IMP RGD PMID:28894415 RGD:38501107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:24990929 RGD:10002784 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 involved_in ISO (MGI:5790016|PMID:26595655) RGD PMID:26595655 MGI:5790016 NCBI chr11:61,733,139...61,884,059
Ensembl chr11:61,733,144...61,868,348
JBrowse link
G Kalrn kalirin, RhoGEF kinase acts_upstream_of_or_within ISO MGI:3831288 (MGI:5645427|PMID:25865668) RGD PMID:25865668 MGI:5645427 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Lgmn legumain involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P10636 (MGI:5702834|PMID:25326800)
Ensembl
RGD
PMID:25326800 GO_REF:0000107 MGI:5702834 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
JBrowse link
G Mme membrane metallo-endopeptidase involved_in ISO UniProtKB:P05067 (MGI:3689460|PMID:16636059) RGD PMID:16636059 MGI:3689460 NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
JBrowse link
G Nos1 nitric oxide synthase 1 IMP RGD PMID:23579428 RGD:7257653 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Nptn neuroplastin IMP RGD PMID:10759566 RGD:8553916 NCBI chr 8:58,996,876...59,063,402
Ensembl chr 8:58,996,887...59,063,401
JBrowse link
G Nrgn neurogranin IMP RGD PMID:7620629 RGD:9835395 NCBI chr 8:37,255,462...37,263,659
Ensembl chr 8:37,256,930...37,257,516
JBrowse link
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 IMP RGD PMID:19026408 RGD:9835020 NCBI chr 1:97,620,638...97,681,186
Ensembl chr 1:97,620,642...97,679,882
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:5426130|PMID:21852430)
Ensembl
RGD
PMID:21852430 GO_REF:0000107 MGI:5426130 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285139|PMID:21167025)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21167025 GO_REF:0000024 GO_REF:0000107 MGI:5285139 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Shisa7 shisa family member 7 involved_in ISO (MGI:6110888|PMID:29199957) RGD PMID:29199957 MGI:6110888 NCBI chr 1:68,993,900...69,012,943
Ensembl chr 1:68,994,025...69,012,943
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO (MGI:5908340|PMID:19004011) RGD PMID:19004011 MGI:5908340 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 IMP RGD PMID:21508097 RGD:10043164 NCBI chr 3:155,680,000...155,725,969
Ensembl chr 3:155,680,000...155,725,909
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060
JBrowse link
positive regulation of synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy8 adenylate cyclase 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2679807|PMID:14585998)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14585998 GO_REF:0000024 GO_REF:0000107 MGI:2679807 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO (MGI:5009363|PMID:19900895) RGD PMID:19900895 MGI:5009363 NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009363|PMID:19900895)
UniProt
RGD
PMID:19900895 GO_REF:0000024 MGI:5009363 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:25723479 RGD:11570400 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Cplx2 complexin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009363|PMID:19900895)
UniProt
RGD
PMID:19900895 GO_REF:0000024 MGI:5009363 NCBI chr17:10,219,577...10,292,835
Ensembl chr17:10,222,347...10,293,855
JBrowse link
G Dbn1 drebrin 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5688247|PMID:25865831)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25865831 GO_REF:0000024 GO_REF:0000107 MGI:5688247 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO UniProtKB:P05067 (MGI:4867584|PMID:21113149) RGD PMID:21113149 MGI:4867584 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:23015442 RGD:12790708 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mmp9 matrix metallopeptidase 9 IMP RGD PMID:17493927 RGD:1642034 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009363|PMID:19900895)
UniProt
RGD
PMID:19900895 GO_REF:0000024 MGI:5009363 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:18540883 RGD:2300227 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Snap25 synaptosome associated protein 25 acts_upstream_of_or_within ISO MGI:3821974 (MGI:3510510|PMID:15470145) RGD PMID:15470145 MGI:3510510 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Ssh1 slingshot protein phosphatase 1 IMP RGD PMID:20442266 RGD:11535133 NCBI chr12:42,621,127...42,683,262
Ensembl chr12:42,621,135...42,683,274
JBrowse link
G Unc13a unc-13 homolog A involved_in ISO UniProtKB:Q8K0T7|UniProtKB:Q9Z1N9 (MGI:5490921|PMID:23658173) RGD PMID:23658173 MGI:5490921 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
regulation of long-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IMP RGD PMID:11282364 RGD:1582105 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:23921129) RGD PMID:23921129 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Bdnf brain-derived neurotrophic factor IDA RGD PMID:12201640 RGD:724690 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta acts_upstream_of_or_within ISO MGI:4359775 (MGI:4359140|PMID:19503086) RGD PMID:19503086 MGI:4359140 NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
JBrowse link
G Camk2g calcium/calmodulin-dependent protein kinase II gamma TAS RGD PMID:12457733 RGD:724617 NCBI chr15:3,504,017...3,563,050
Ensembl chr15:3,504,085...3,563,050
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:3039785 (MGI:3580530|PMID:12427827)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:12427827 GO_REF:0000024 GO_REF:0000107 MGI:3580530 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2387895 (MGI:892675|PMID:9169514) RGD PMID:9169514 MGI:892675 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Egr1 early growth response 1 IMP RGD PMID:16930406 RGD:1626499 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (MGI:5514474|PMID:23921129) RGD PMID:23921129 MGI:5514474 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 acts_upstream_of_or_within ISO MGI:1857979 (MGI:3040774|PMID:12947409), (MGI:3050715|PMID:11182092), (MGI:3577154|PMID:15673679), (MGI:3611088|PMID:16219388) RGD PMID:11182092 PMID:12947409 PMID:15673679 PMID:16219388 MGI:3040774 MGI:3050715 MGI:3577154 MGI:3611088 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928283|MGI:1928284|MGI:2448952|MGI:3611337|MGI:3692441 (MGI:1858680|PMID:10818139), (MGI:3691363|PMID:17015831), (MGI:3703316|PMID:17313573) RGD PMID:10818139 PMID:17015831 PMID:17313573 MGI:1858680 MGI:3691363 MGI:3703316 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IMP RGD PMID:17655746 PMID:16904707 RGD:1642204, RGD:1642207 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IMP RGD PMID:17655746 PMID:16904707 RGD:1642204, RGD:1642207 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grm5 glutamate metabotropic receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857437 (MGI:3663522|PMID:16024054)
Ensembl
RGD
PMID:16024054 GO_REF:0000107 MGI:3663522 NCBI chr 1:141,310,069...141,884,980
Ensembl chr 1:141,312,368...141,882,274
JBrowse link
G Hras HRas proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:3580632 (MGI:3580530|PMID:12427827) RGD PMID:12427827 MGI:3580530 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3655847|MGI:3761690 (MGI:3760488|PMID:17942730)
Ensembl
RGD
PMID:17942730 GO_REF:0000107 MGI:3760488 NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461
JBrowse link
G Kras KRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:97306 (MGI:2157992|PMID:11793011) RGD PMID:11793011 MGI:2157992 NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Lnpep leucyl and cystinyl aminopeptidase IMP RGD PMID:11282364 RGD:1582105 NCBI chr 1:58,258,642...58,355,532
Ensembl chr 1:58,258,642...58,354,544
JBrowse link
G Neto1 neuropilin and tolloid like 1 involved_in ISO (MGI:3836361|PMID:19243221) RGD PMID:19243221 MGI:3836361 NCBI chr18:79,635,633...79,753,913
Ensembl chr18:79,635,633...79,749,030
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857478|MGI:96680 (MGI:2157992|PMID:11793011)
Ensembl
RGD
PMID:11793011 GO_REF:0000107 MGI:2157992 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Plk3 polo-like kinase 3 NAS RGD PMID:10523297 RGD:61555 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
JBrowse link
G Rab11a RAB11a, member RAS oncogene family IMP RGD PMID:18045925 RGD:2306457 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18653660 PMID:21873635 RGD:2306450, RGD:13792537 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:68,332,360...68,334,470 JBrowse link
G Rab8a RAB8A, member RAS oncogene family IDA
IMP
RGD PMID:15297461 PMID:18045925 RGD:2306456, RGD:2306457 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 acts_upstream_of_or_within ISO MGI:2178099 (MGI:2157168|PMID:11797010) RGD PMID:11797010 MGI:2157168 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2429773 (MGI:3512696|PMID:15510220) RGD PMID:15510220 MGI:3512696 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1277959|MGI:3576223|MGI:3580631 (MGI:3576792|PMID:15781580), (MGI:3580530|PMID:12427827)
Ensembl
RGD
PMID:12427827 PMID:15781580 GO_REF:0000107 MGI:3576792 MGI:3580530 NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
JBrowse link
G Syngr1 synaptogyrin 1 involved_in ISO (MGI:1349221|PMID:10595519) RGD PMID:10595519 MGI:1349221 NCBI chr 7:111,635,911...111,659,341
Ensembl chr 7:111,635,918...111,659,341
JBrowse link
G Synpo synaptopodin involved_in ISO (MGI:2673780|PMID:12928494) RGD PMID:12928494 MGI:2673780 NCBI chr18:54,048,299...54,106,388
Ensembl chr18:54,026,152...54,102,126
JBrowse link
G Syp synaptophysin involved_in IEA
ISO
GO_REF:0000107
(MGI:1349221|PMID:10595519)
Ensembl
RGD
PMID:10595519 GO_REF:0000107 MGI:1349221 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
regulation of long-term synaptic depression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arc activity-regulated cytoskeleton-associated protein involved_in ISS
ISO
GO_REF:0000024
(MGI:6148485|PMID:29264923)
UniProt
RGD
PMID:29264923 GO_REF:0000024 MGI:6148485 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Dgki diacylglycerol kinase, iota acts_upstream_of_or_within ISO MGI:3584141 (MGI:4936793|PMID:21119615) RGD PMID:21119615 MGI:4936793 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5320264|PMID:21795692)
Ensembl
RGD
PMID:21795692 PMID:21795692 GO_REF:0000107 MGI:5320264, RGD:7349315 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Sorcs3 sortilin-related VPS10 domain containing receptor 3 acts_upstream_of_or_within ISO MGI:5562419 (MGI:5559089|PMID:24069373) RGD PMID:24069373 MGI:5559089 NCBI chr 1:247,099,178...247,734,027
Ensembl chr 1:247,099,408...247,734,027
JBrowse link
regulation of long-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in ISO (MGI:6114835|PMID:19221410) RGD PMID:19221410 MGI:6114835 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in ISS
ISO
IMP
IBA
GO_REF:0000024
(MGI:6316437|PMID:31151856)
PMID:10818134
PMID:17898216
PMID:21873635
UniProt
RGD
PMID:31151856 PMID:10818134 PMID:17898216 PMID:21873635 GO_REF:0000024 MGI:6316437, RGD:13514089, RGD:12793056, RGD:13792537 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Calb1 calbindin 1 involved_in IBA
ISO
PMID:21873635
(MGI:3775957|PMID:11955516)
RGD PMID:11955516 PMID:21873635 MGI:3775957, RGD:13792537 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Calb2 calbindin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438
JBrowse link
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 involved_in ISO (MGI:3620343|PMID:16505352) RGD PMID:16505352 MGI:3620343 NCBI chr 6:127,243,315...127,274,765
Ensembl chr 6:127,243,315...127,274,760
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:6294161|PMID:28556462)
UniProt
RGD
PMID:28556462 GO_REF:0000024 MGI:6294161 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO MGI:3796837 (MGI:5575797|PMID:24889619) RGD PMID:24889619 MGI:5575797 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1339975 (MGI:5620820|PMID:25242307)
Ensembl
RGD
PMID:25242307 GO_REF:0000107 MGI:5620820 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5286761|PMID:21808020)
BHF-UCL
RGD
PMID:21808020 PMID:21808020 GO_REF:0000024 MGI:5286761, RGD:8553412 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in IMP PMID:15911354 UniProt PMID:15911354 RGD:9850096 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Paip2 poly(A) binding protein interacting protein 2 acts_upstream_of_or_within ISO (MGI:5494875|PMID:23622065) RGD PMID:23622065 MGI:5494875 NCBI chr18:27,199,762...27,218,359
Ensembl chr18:27,199,796...27,214,863
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO MGI:97306 (MGI:5620820|PMID:25242307) RGD PMID:25242307 MGI:5620820 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pirb paired Ig-like receptor B involved_in ISO ComplexPortal:CPX-1134 (MGI:5511064|PMID:24052308) RGD PMID:24052308 MGI:5511064
G Scgn secretagogin, EF-hand calcium binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,106,810...41,148,251
Ensembl chr17:41,106,467...41,148,667
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5013997|PMID:21558424)
BHF-UCL
RGD
PMID:21558424 GO_REF:0000024 MGI:5013997 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 involved_in ISO (MGI:6241448|PMID:30401835) RGD PMID:30401835 MGI:6241448 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
regulation of neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp4 acid phosphatase 4 involved_in IBA
ISO
PMID:21873635
(PMID:15219672)
RGD PMID:15219672 PMID:21873635 RGD:13792537 NCBI chr 1:94,736,376...94,751,871
Ensembl chr 1:94,735,514...94,744,623
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:7857651 PMID:21873635 RGD:61538, RGD:13792537 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Bcan brevican IEP RGD PMID:15935069 RGD:1578390 NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 IEP
NAS
RGD PMID:9532582 PMID:9532582 RGD:68312, RGD:68312 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 IEP
NAS
RGD PMID:9532582 PMID:9532582 RGD:68312, RGD:68312 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:3760498|PMID:17610578)
ParkinsonsUK-UCL
RGD
PMID:17610578 GO_REF:0000024 MGI:3760498 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Cntn2 contactin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181052 (MGI:1930847|PMID:11178983)
Ensembl
RGD
PMID:11178983 GO_REF:0000107 MGI:1930847 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 acts_upstream_of_or_within ISO MGI:3606747 (MGI:3606369|PMID:15169862) RGD PMID:15169862 MGI:3606369 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
JBrowse link
G Cpg1 candidate plasticity gene 1 IDA RGD PMID:8515813 RGD:632508 NCBI chr 6:118,312,220...118,324,213
Ensembl chr 6:118,312,220...118,324,213
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IMP PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Egr2 early growth response 2 IEP RGD PMID:8619872 RGD:728620 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within ISO MGI:2149765 (MGI:2155580|PMID:11754835) RGD PMID:11754835 MGI:2155580 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2178083|MGI:2181422 (MGI:3622400|PMID:15576450) RGD PMID:15576450 MGI:3622400 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:17329210 RGD:1641844 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Jph3 junctophilin 3 involved_in
acts_upstream_of_or_within
ISO (MGI:3654871|PMID:16809425)
MGI:2443113 (MGI:3714568|PMID:17347645)
RGD PMID:16809425 PMID:17347645 MGI:3654871 MGI:3714568 NCBI chr19:49,793,967...49,855,338
Ensembl chr19:49,793,092...49,855,338
JBrowse link
G Kalrn kalirin, RhoGEF kinase acts_upstream_of_or_within ISO MGI:3831288|MGI:97845 (MGI:5645427|PMID:25865668) RGD PMID:25865668 MGI:5645427 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 IMP RGD PMID:21521760 RGD:7205439 NCBI chr18:37,817,966...38,258,347
Ensembl chr18:37,817,957...38,258,347
JBrowse link
G Mctp1 multiple C2 and transmembrane domain containing 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:6,071,408...6,761,833
Ensembl chr 2:6,065,808...6,761,833
JBrowse link
G Mylk2 myosin light chain kinase 2 IMP RGD PMID:16515842 RGD:1600505 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Ncdn neurochondrin involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9398642 PMID:21873635 RGD:724406, RGD:13792537 NCBI chr 5:139,037,807...139,047,645
Ensembl chr 5:139,037,819...139,047,568
JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor involved_in IEA
IMP
GO_REF:0000002
PMID:18303947
InterPro PMID:18303947 GO_REF:0000002, RGD:8553324 NCBI chr 3:7,861,846...7,870,615
Ensembl chr 3:7,861,872...7,870,614
JBrowse link
G Pmch pro-melanin-concentrating hormone IMP RGD PMID:11814630 RGD:729531 NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:22,511,934...22,513,250
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2685385 (MGI:5645427|PMID:25865668) RGD PMID:25865668 MGI:5645427 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rasgrf1 RAS protein-specific guanine nucleotide-releasing factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2157015 (MGI:2156966|PMID:11749043)
Ensembl
RGD
PMID:11749043 GO_REF:0000107 MGI:2156966 NCBI chr 8:90,445,154...90,574,274
Ensembl chr 8:90,445,154...90,574,269
JBrowse link
G Rheb Ras homolog, mTORC1 binding NAS RGD PMID:8206940 RGD:729721 NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
JBrowse link
G Rnf39 ring finger protein 39 NAS RGD PMID:11716498 RGD:633280 NCBI chr20:1,604,794...1,610,283
Ensembl chr20:1,604,794...1,610,283
JBrowse link
G S100b S100 calcium binding protein B acts_upstream_of_or_within ISO MGI:2451049 (MGI:2450006|PMID:11891290) RGD PMID:11891290 MGI:2450006 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2429773 (MGI:3760498|PMID:17610578) RGD PMID:17610578 MGI:3760498 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Star steroidogenic acute regulatory protein IMP RGD PMID:16673174 RGD:1600077 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Syp synaptophysin involved_in NAS
IBA
PMID:21873635 RGD
GO_Central
PMID:12363201 PMID:21873635 RGD:730263, RGD:13792537 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Vgf VGF nerve growth factor inducible IDA synthetic rat C-terminal VGF peptides RGD PMID:14645472 RGD:2289061 NCBI chr12:19,637,313...19,645,123
Ensembl chr12:19,637,320...19,640,341
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060
JBrowse link
regulation of short-term neuronal synaptic plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IDA RGD PMID:12201640 RGD:724690 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:6111006|PMID:29135436), (MGI:6256925|PMID:29780879) RGD PMID:29135436 PMID:29780879 MGI:6111006 MGI:6256925 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 IDA RGD PMID:17395219 RGD:1642466 NCBI chr11:27,169,739...27,571,131
Ensembl chr11:27,169,740...27,570,645
JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:15537878)
MGI:1857979 (MGI:3050715|PMID:11182092)
RGD PMID:11182092 PMID:15537878 MGI:3050715 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375
JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:3839794 (MGI:5638946|PMID:25834037) RGD PMID:25834037 MGI:5638946 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 IMP RGD PMID:11797009 RGD:633666 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(MGI:3653150|PMID:9194562)
ParkinsonsUK-UCL
RGD
PMID:9194562 GO_REF:0000024 MGI:3653150 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3652690|PMID:16782817)
ParkinsonsUK-UCL
RGD
PMID:16782817 GO_REF:0000024 MGI:3652690 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
G Shisa6 shisa family member 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:50,897,740...51,192,413
Ensembl chr10:50,903,333...51,192,063
JBrowse link
G Shisa7 shisa family member 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:68,993,900...69,012,943
Ensembl chr 1:68,994,025...69,012,943
JBrowse link
G Shisa8 shisa family member 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,722,408...113,727,858
Ensembl chr 7:113,722,408...113,727,858
JBrowse link
G Shisa9 shisa family member 9 involved_in ISO (MGI:4440391|PMID:20185686) RGD PMID:20185686 MGI:4440391 NCBI chr10:3,335,616...3,629,334 JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in ISS
ISO
GO_REF:0000024
(MGI:5829350|PMID:26136660)
UniProt
RGD
PMID:26136660 GO_REF:0000024 MGI:5829350 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268
JBrowse link
G Slc8a2 solute carrier family 8 member A2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:2664655|PMID:12818181)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12818181 GO_REF:0000024 GO_REF:0000107 MGI:2664655 NCBI chr 1:76,816,583...76,852,928
Ensembl chr 1:76,808,725...76,847,072
JBrowse link
G Syngr1 synaptogyrin 1 involved_in ISO (MGI:1349221|PMID:10595519) RGD PMID:10595519 MGI:1349221 NCBI chr 7:111,635,911...111,659,341
Ensembl chr 7:111,635,918...111,659,341
JBrowse link
G Syp synaptophysin involved_in IEA
ISO
GO_REF:0000107
(MGI:1349221|PMID:10595519)
Ensembl
RGD
PMID:10595519 GO_REF:0000107 MGI:1349221 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Unc13a unc-13 homolog A acts_upstream_of_or_within ISO MGI:2449468 (MGI:2158113|PMID:11832228) RGD PMID:11832228 MGI:2158113 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B acts_upstream_of_or_within
involved_in
ISO MGI:2449706 (MGI:2158113|PMID:11832228)
(MGI:5795822|PMID:19700493)
RGD PMID:11832228 PMID:19700493 MGI:2158113 MGI:5795822 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
short-term synaptic potentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncstn nicastrin acts_upstream_of_or_within ISO MGI:3796837 (MGI:5575797|PMID:24889619) RGD PMID:24889619 MGI:5575797 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Snap25 synaptosome associated protein 25 acts_upstream_of_or_within ISO MGI:3821974 (MGI:3510510|PMID:15470145) RGD PMID:15470145 MGI:3510510 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5560382|PMID:24569478), (MGI:5707519|PMID:26738595)
UniProt
RGD
PMID:24569478 PMID:26738595 GO_REF:0000024 MGI:5560382 MGI:5707519 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    biological regulation 13513
      regulation of biological quality 4181
        regulation of synaptic plasticity 343
          long-term synaptic depression + 36
          long-term synaptic potentiation + 206
          negative regulation of synaptic plasticity + 6
          positive regulation of synaptic plasticity + 15
          regulation of long-term synaptic depression + 17
          regulation of long-term synaptic potentiation + 55
          regulation of neuronal synaptic plasticity + 80
          regulation of short-term synaptic potentiation + 1
          regulation of synaptic metaplasticity + 0
          regulation of synaptic plasticity by chemical substance + 1
          regulation of synaptic scaling 0
          short-term synaptic potentiation + 4
Path 2
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cell communication 7543
        cell-cell signaling 1735
          synaptic signaling 919
            trans-synaptic signaling 892
              anterograde trans-synaptic signaling 883
                chemical synaptic transmission 883
                  modulation of chemical synaptic transmission 651
                    regulation of synaptic plasticity 343
                      long-term synaptic depression + 36
                      long-term synaptic potentiation + 206
                      negative regulation of synaptic plasticity + 6
                      positive regulation of synaptic plasticity + 15
                      regulation of long-term synaptic depression + 17
                      regulation of long-term synaptic potentiation + 55
                      regulation of neuronal synaptic plasticity + 80
                      regulation of short-term synaptic potentiation + 1
                      regulation of synaptic metaplasticity + 0
                      regulation of synaptic plasticity by chemical substance + 1
                      regulation of synaptic scaling 0
                      short-term synaptic potentiation + 4
paths to the root