Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:ephrin receptor signaling pathway
go back to main search page
Accession:GO:0048013 term browser browse the term
Definition:The series of molecular signals initiated by ephrin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: Eph receptor signaling pathway;   Eph receptor signalling pathway
 xref: Reactome:R-HSA-2682334 "EPH-Ephrin signaling"

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
ephrin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669 		JBrowse link
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:24,093,838...24,200,611
Ensembl chrNW_004936476:24,092,759...24,200,612 		JBrowse link
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:13,753,605...14,805,539
Ensembl chrNW_004936492:13,753,824...14,803,766 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:2,411,194...2,415,106
Ensembl chrNW_004936538:2,413,967...2,414,890 		JBrowse link
G Chn1 chimerin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936509:4,507,042...4,677,681
Ensembl chrNW_004936509:4,506,311...4,678,313 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,581,453...7,609,543
Ensembl chrNW_004936538:7,581,498...7,609,544 		JBrowse link
G Diaph1 diaphanous related formin 1 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chrNW_004936504:12,548,452...12,645,236
Ensembl chrNW_004936504:12,548,452...12,643,399 		JBrowse link
G Diaph2 diaphanous related formin 2 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chrNW_004936584:2,286,919...3,081,652
Ensembl chrNW_004936584:2,287,288...3,076,788 		JBrowse link
G Efna1 ephrin A1 involved_in
acts_upstream_of_or_within 		IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:4,654,503...4,660,950
Ensembl chrNW_004936580:4,654,503...4,660,966 		JBrowse link
G Efna2 ephrin A2 involved_in IEA TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:648,336...657,768
Ensembl chrNW_004936588:648,336...657,785 		JBrowse link
G Efna3 ephrin A3 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:4,613,847...4,622,834
Ensembl chrNW_004936580:4,613,847...4,621,208 		JBrowse link
G Efna4 ephrin A4 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936580:4,598,748...4,604,293
Ensembl chrNW_004936580:4,599,136...4,604,257 		JBrowse link
G Efna5 ephrin A5 involved_in IEA TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936531:2,217,467...2,267,265
Ensembl chrNW_004936531:2,217,368...2,300,794 		JBrowse link
G Efnb1 ephrin B1 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936777:434,729...447,778
Ensembl chrNW_004936777:434,692...447,780 		JBrowse link
G Efnb2 ephrin B2 involved_in IEA TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:5,138,751...5,181,630
Ensembl chrNW_004936472:5,138,745...5,181,668 		JBrowse link
G Efnb3 ephrin B3 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:954,383...960,573
Ensembl chrNW_004936595:954,383...960,589 		JBrowse link
G Epha1 EPH receptor A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936527:833,578...847,824
Ensembl chrNW_004936527:830,112...848,512 		JBrowse link
G Epha10 EPH receptor A10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:19,916,666...19,935,958 JBrowse link
G Epha2 EPH receptor A2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861 		JBrowse link
G Epha3 EPH receptor A3 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936610:462,842...799,466
Ensembl chrNW_004936610:462,853...799,364 		JBrowse link
G Epha4 EPH receptor A4 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348 		JBrowse link
G Epha5 EPH receptor A5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936582:2,503,546...2,832,950
Ensembl chrNW_004936582:2,505,145...2,830,014 		JBrowse link
G Epha6 EPH receptor A6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936666:2,280,811...3,063,601
Ensembl chrNW_004936666:2,282,000...3,061,944 		JBrowse link
G Epha7 EPH receptor A7 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936812:698,548...865,589
Ensembl chrNW_004936812:698,533...865,481 		JBrowse link
G Epha8 EPH receptor A8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:7,928,700...7,981,961
Ensembl chrNW_004936474:7,928,700...7,981,962 		JBrowse link
G Ephb1 EPH receptor B1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942 		JBrowse link
G Ephb2 EPH receptor B2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Ephb3 EPH receptor B3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142 		JBrowse link
G Ephb4 EPH receptor B4 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:794,837...811,637
Ensembl chrNW_004936543:794,725...811,637 		JBrowse link
G Ephb6 EPH receptor B6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936527:330,034...345,166
Ensembl chrNW_004936527:329,990...345,167 		JBrowse link
G Git1 GIT ArfGAP 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,684,660...5,694,779
Ensembl chrNW_004936538:5,684,644...5,695,043 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Nck1 NCK adaptor protein 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:9,647,161...9,718,512
Ensembl chrNW_004936529:9,701,530...9,721,869 		JBrowse link
G Nck2 NCK adaptor protein 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936764:141,159...185,482
Ensembl chrNW_004936764:140,946...185,529 		JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:4,250,389...4,282,041
Ensembl chrNW_004936525:4,220,385...4,282,065 		JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:10655584) UniProt PMID:10655584 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448 		JBrowse link
G Sipa1l1 signal induced proliferation associated 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:819,503...1,175,043
Ensembl chrNW_004936488:860,129...1,175,051 		JBrowse link
G Ss18 SS18 subunit of BAF chromatin remodeling complex acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:5,199,298...5,284,505
Ensembl chrNW_004936550:5,211,049...5,284,433 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 acts_upstream_of_or_within ISO (PMID:14988728) MGI PMID:14988728 NCBI chrNW_004936500:10,451,599...10,812,239
Ensembl chrNW_004936500:10,688,236...10,812,192 		JBrowse link
positive regulation of ephrin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797 		JBrowse link
regulation of ephrin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (PMID:20100865) MGI PMID:20100865 NCBI chrNW_004936476:24,093,838...24,200,611
Ensembl chrNW_004936476:24,092,759...24,200,612 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17413
    cellular process 17012
      signal transduction 5751
        cell surface receptor signaling pathway 2581
          enzyme-linked receptor protein signaling pathway 952
            cell surface receptor protein tyrosine kinase signaling pathway 625
              ephrin receptor signaling pathway 41
                negative regulation of ephrin receptor signaling pathway 0
                positive regulation of ephrin receptor signaling pathway 1
                regulation of ephrin receptor signaling pathway + 2
Path 2
Term Annotations click to browse term
  biological_process 17413
    biological regulation 11396
      regulation of biological process 11032
        signaling 6245
          signal transduction 5751
            cell surface receptor signaling pathway 2581
              enzyme-linked receptor protein signaling pathway 952
                cell surface receptor protein tyrosine kinase signaling pathway 625
                  ephrin receptor signaling pathway 41
                    negative regulation of ephrin receptor signaling pathway 0
                    positive regulation of ephrin receptor signaling pathway 1
                    regulation of ephrin receptor signaling pathway + 2
paths to the root